AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0780035980.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0780035980.01.T01 MTR_7g006360 56.767 266 73 7 25 248 10 275 9.19e-86 257
MsG0780035980.01.T01 MTR_1g442850 61.881 202 75 2 49 250 178 377 1.17e-83 254
MsG0780035980.01.T01 MTR_7g061050 63.107 206 72 3 48 250 181 385 2.76e-82 251
MsG0780035980.01.T01 MTR_7g061090 63.636 209 66 5 48 249 201 406 1.15e-81 250
MsG0780035980.01.T01 MTR_7g056710 64.615 195 65 4 53 247 189 379 1.09e-79 244
MsG0780035980.01.T01 MTR_4g033495 64.000 200 68 3 49 246 205 402 6.99e-78 242
MsG0780035980.01.T01 MTR_7g056717 62.626 198 70 4 52 249 193 386 1.59e-75 234
MsG0780035980.01.T01 MTR_7g061060 63.590 195 65 4 48 239 184 375 2.65e-74 231
MsG0780035980.01.T01 MTR_4g034860 62.032 187 66 4 49 232 209 393 4.31e-74 231
MsG0780035980.01.T01 MTR_7g056737 62.842 183 65 3 53 235 194 373 5.41e-74 231
MsG0780035980.01.T01 MTR_7g056570 57.426 202 81 5 48 248 185 382 2.29e-67 214
MsG0780035980.01.T01 MTR_2g043410 47.748 222 90 6 50 248 198 416 2.76e-58 191
MsG0780035980.01.T01 MTR_2g043400 48.430 223 88 7 50 248 198 417 1.22e-57 189
MsG0780035980.01.T01 MTR_7g056503 48.804 209 86 6 52 250 202 399 3.32e-57 187
MsG0780035980.01.T01 MTR_8g066440 51.196 209 87 6 47 248 201 401 3.46e-57 187
MsG0780035980.01.T01 MTR_7g050520 48.792 207 91 5 52 249 190 390 1.12e-56 186
MsG0780035980.01.T01 MTR_7g050480 49.756 205 88 5 52 247 190 388 1.63e-56 185
MsG0780035980.01.T01 MTR_7g055830 51.152 217 85 5 52 248 141 356 5.38e-56 183
MsG0780035980.01.T01 MTR_7g056003 47.964 221 88 7 53 248 189 407 8.12e-56 184
MsG0780035980.01.T01 MTR_7g055870 51.152 217 85 5 52 248 209 424 1.16e-55 184
MsG0780035980.01.T01 MTR_7g055930 51.152 217 85 5 52 248 209 424 1.55e-55 184
MsG0780035980.01.T01 MTR_5g056020 47.534 223 92 5 48 250 205 422 2.26e-54 182
MsG0780035980.01.T01 MTR_7g056290 45.455 220 94 7 52 248 204 420 1.13e-53 179
MsG0780035980.01.T01 MTR_5g058620 47.059 221 89 6 52 247 63 280 1.24e-53 175
MsG0780035980.01.T01 MTR_1g058870 47.059 221 89 6 52 247 63 280 1.24e-53 175
MsG0780035980.01.T01 MTR_4g013175 47.556 225 86 9 52 247 203 424 3.20e-53 177
MsG0780035980.01.T01 MTR_4g013180 50.000 190 86 2 52 232 183 372 3.46e-53 179
MsG0780035980.01.T01 MTR_3g080370 48.131 214 91 6 53 248 206 417 3.97e-53 178
MsG0780035980.01.T01 MTR_7g056390 44.545 220 96 7 52 248 200 416 1.15e-52 176
MsG0780035980.01.T01 MTR_6g065510 47.847 209 97 5 52 250 126 332 1.60e-52 173
MsG0780035980.01.T01 MTR_4g013185 44.635 233 97 8 47 250 198 427 3.77e-52 175
MsG0780035980.01.T01 MTR_6g016285 47.248 218 97 5 48 248 201 417 5.51e-52 175
MsG0780035980.01.T01 MTR_7g078860 50.515 194 86 7 47 232 187 378 9.92e-52 173
MsG0780035980.01.T01 MTR_3g072470 44.796 221 95 6 52 248 200 417 1.58e-51 173
MsG0780035980.01.T01 MTR_6g055210 47.465 217 94 5 52 248 203 419 1.67e-51 174
MsG0780035980.01.T01 MTR_7g055953 45.498 211 97 6 52 250 112 316 2.05e-51 170
MsG0780035980.01.T01 MTR_3g464500 46.411 209 98 5 52 248 196 402 2.14e-51 172
MsG0780035980.01.T01 MTR_7g052150 46.190 210 95 5 52 247 193 398 5.75e-51 171
MsG0780035980.01.T01 MTR_7g060940 47.393 211 89 6 52 247 189 392 6.77e-51 171
MsG0780035980.01.T01 MTR_7g078840 43.290 231 103 5 47 250 204 433 6.82e-51 172
MsG0780035980.01.T01 MTR_7g060960 48.276 203 92 5 49 247 173 366 9.70e-51 170
MsG0780035980.01.T01 MTR_1g088120 39.130 276 130 8 5 248 141 410 1.19e-50 171
MsG0780035980.01.T01 MTR_7g078900 44.690 226 98 6 47 248 200 422 1.36e-50 171
MsG0780035980.01.T01 MTR_7g091610 42.739 241 96 7 18 248 38 246 1.53e-50 166
MsG0780035980.01.T01 MTR_7g062060 45.673 208 98 4 47 250 205 401 2.13e-50 170
MsG0780035980.01.T01 MTR_7g056173 47.685 216 92 7 52 247 51 265 2.87e-50 167
MsG0780035980.01.T01 MTR_6g088385 47.368 209 87 6 52 247 119 317 1.20e-49 166
MsG0780035980.01.T01 MTR_3g013470 48.718 195 75 6 52 232 164 347 3.12e-49 166
MsG0780035980.01.T01 MTR_3g464470 45.192 208 102 5 52 248 173 379 4.36e-49 166
MsG0780035980.01.T01 MTR_0464s0020 44.595 222 95 7 52 248 210 428 4.57e-49 167
MsG0780035980.01.T01 MTR_4g024890 44.175 206 103 4 52 248 182 384 6.71e-49 165
MsG0780035980.01.T01 MTR_7g028660 45.327 214 99 6 43 250 179 380 8.79e-49 165
MsG0780035980.01.T01 MTR_6g092560 46.296 216 94 7 47 247 186 394 9.78e-49 166
MsG0780035980.01.T01 MTR_4g008790 48.438 192 87 5 50 230 223 413 1.17e-48 167
MsG0780035980.01.T01 MTR_5g043160 46.119 219 99 6 47 250 245 459 2.18e-48 166
MsG0780035980.01.T01 MTR_7g077970 44.397 232 91 7 50 248 195 421 3.21e-48 164
MsG0780035980.01.T01 MTR_5g068040 46.698 212 98 6 52 250 173 382 5.55e-48 163
MsG0780035980.01.T01 MTR_7g055987 58.394 137 54 2 52 188 187 320 7.92e-48 162
MsG0780035980.01.T01 MTR_7g113500 42.254 213 112 4 48 249 170 382 1.37e-47 162
MsG0780035980.01.T01 MTR_6g017280 48.571 210 94 6 47 248 184 387 1.42e-47 162
MsG0780035980.01.T01 MTR_4g031020 42.718 206 108 4 52 247 221 426 3.00e-47 162
MsG0780035980.01.T01 MTR_3g437520 47.959 196 85 4 52 231 210 404 3.69e-47 162
MsG0780035980.01.T01 MTR_5g069760 45.933 209 91 6 52 250 175 371 8.88e-47 159
MsG0780035980.01.T01 MTR_7g079160 47.236 199 88 6 43 230 208 400 1.40e-46 161
MsG0780035980.01.T01 MTR_7g057270 42.857 210 104 6 53 248 206 413 1.46e-46 160
MsG0780035980.01.T01 MTR_7g078040 43.860 228 94 7 52 248 208 432 1.82e-46 160
MsG0780035980.01.T01 MTR_7g009265 45.413 218 99 5 47 248 110 323 2.23e-46 157
MsG0780035980.01.T01 MTR_7g445890 45.370 216 95 7 52 248 171 382 5.81e-46 157
MsG0780035980.01.T01 MTR_2g006360 46.009 213 77 5 49 249 177 363 6.64e-46 157
MsG0780035980.01.T01 MTR_2g017720 45.226 199 98 5 52 244 103 296 7.35e-46 159
MsG0780035980.01.T01 MTR_4g030830 42.793 222 97 7 48 248 181 393 7.57e-46 157
MsG0780035980.01.T01 MTR_7g070830 44.762 210 100 4 52 249 216 421 1.38e-45 157
MsG0780035980.01.T01 MTR_2g010950 43.662 213 107 6 48 248 193 404 1.43e-45 157
MsG0780035980.01.T01 MTR_2g010920 45.327 214 104 7 48 248 211 424 3.57e-45 157
MsG0780035980.01.T01 MTR_0707s0020 44.390 205 99 5 52 247 244 442 6.52e-45 156
MsG0780035980.01.T01 MTR_4g030980 40.777 206 112 4 52 247 221 426 6.60e-45 156
MsG0780035980.01.T01 MTR_7g066100 43.925 214 87 5 52 248 196 393 6.62e-45 155
MsG0780035980.01.T01 MTR_6g017305 44.105 229 102 6 42 248 57 281 7.11e-45 152
MsG0780035980.01.T01 MTR_7g077990 42.593 216 101 6 48 245 180 390 9.26e-45 155
MsG0780035980.01.T01 MTR_7g055977 43.810 210 105 5 52 250 175 382 2.83e-44 153
MsG0780035980.01.T01 MTR_7g070880 43.810 210 102 4 52 249 216 421 5.15e-44 153
MsG0780035980.01.T01 MTR_7g066030 42.925 212 96 5 52 250 205 404 6.03e-44 153
MsG0780035980.01.T01 MTR_5g069930 42.857 210 99 6 52 250 179 378 9.47e-44 152
MsG0780035980.01.T01 MTR_4g019990 45.320 203 102 5 52 247 187 387 1.24e-43 152
MsG0780035980.01.T01 MTR_0242s0060 42.667 225 97 7 52 247 195 416 2.38e-43 152
MsG0780035980.01.T01 MTR_0242s0040 42.667 225 97 7 52 247 195 416 2.38e-43 152
MsG0780035980.01.T01 MTR_4g129190 42.727 220 98 8 52 248 175 389 2.46e-43 151
MsG0780035980.01.T01 MTR_7g035295 47.826 184 76 5 79 248 202 379 2.59e-43 151
MsG0780035980.01.T01 MTR_6g086920 42.326 215 105 6 52 248 256 469 2.59e-43 153
MsG0780035980.01.T01 MTR_6g042600 44.944 178 85 3 77 244 146 320 3.44e-43 151
MsG0780035980.01.T01 MTR_7g056200 44.131 213 100 7 52 248 172 381 4.76e-43 150
MsG0780035980.01.T01 MTR_4g011660 39.912 228 96 5 52 248 200 417 4.97e-43 151
MsG0780035980.01.T01 MTR_7g061010 43.204 206 105 5 48 247 187 386 5.21e-43 150
MsG0780035980.01.T01 MTR_6g017295 43.556 225 88 5 44 233 110 330 5.64e-43 153
MsG0780035980.01.T01 MTR_2g027820 44.271 192 99 4 62 247 110 299 1.18e-42 147
MsG0780035980.01.T01 MTR_7g034310 44.444 198 92 5 58 250 45 229 1.32e-42 145
MsG0780035980.01.T01 MTR_2g047200 44.118 204 103 7 52 248 194 393 4.35e-42 148
MsG0780035980.01.T01 MTR_0128s0010 42.254 213 99 7 48 248 197 397 6.25e-42 147
MsG0780035980.01.T01 MTR_0649s0020 41.315 213 109 6 52 250 179 389 1.80e-41 146
MsG0780035980.01.T01 MTR_2g047892 43.128 211 103 9 52 250 193 398 3.13e-41 145
MsG0780035980.01.T01 MTR_2g047878 44.335 203 84 5 52 250 188 365 3.15e-41 145
MsG0780035980.01.T01 MTR_7g077910 41.921 229 102 9 47 248 111 335 4.04e-41 144
MsG0780035980.01.T01 MTR_7g091630 40.789 228 106 7 48 248 205 430 6.75e-41 145
MsG0780035980.01.T01 MTR_7g052670 43.498 223 97 9 48 248 209 424 7.69e-41 145
MsG0780035980.01.T01 MTR_4g030090 40.930 215 103 6 52 248 191 399 8.79e-41 144
MsG0780035980.01.T01 MTR_7g066060 43.878 196 100 3 58 248 216 406 1.45e-40 146
MsG0780035980.01.T01 MTR_7g091640 50.000 144 64 3 49 185 207 349 2.01e-40 143
MsG0780035980.01.T01 MTR_7g066850 41.964 224 105 7 47 248 184 404 3.33e-40 144
MsG0780035980.01.T01 MTR_7g066840 40.724 221 103 9 47 248 186 397 3.86e-40 143
MsG0780035980.01.T01 MTR_2g010935 40.845 213 89 6 48 248 62 249 1.31e-39 137
MsG0780035980.01.T01 MTR_0128s0020 42.439 205 98 5 52 247 199 392 2.10e-39 140
MsG0780035980.01.T01 MTR_7g056260 54.676 139 49 4 52 180 183 317 2.42e-39 139
MsG0780035980.01.T01 MTR_4g129160 49.091 165 69 4 52 209 204 360 2.55e-39 140
MsG0780035980.01.T01 MTR_7g066080 43.810 210 97 4 57 248 208 414 2.87e-39 141
MsG0780035980.01.T01 MTR_1g071010 40.183 219 100 6 47 248 182 386 5.15e-39 139
MsG0780035980.01.T01 MTR_1g029650 38.115 244 105 7 34 247 175 402 1.62e-38 139
MsG0780035980.01.T01 MTR_4g006350 38.140 215 117 6 46 247 662 873 6.49e-38 141
MsG0780035980.01.T01 MTR_2g461450 40.223 179 94 2 58 231 183 353 8.44e-38 135
MsG0780035980.01.T01 MTR_2g047895 42.857 189 84 5 52 230 115 289 1.32e-37 135
MsG0780035980.01.T01 MTR_0128s0070 35.294 255 138 7 12 250 155 398 1.75e-37 135
MsG0780035980.01.T01 MTR_2g010900 47.093 172 81 6 48 210 158 328 2.11e-37 135
MsG0780035980.01.T01 MTR_7g022670 40.670 209 107 7 53 250 150 352 4.07e-37 134
MsG0780035980.01.T01 MTR_1g112010 40.777 206 88 7 48 247 146 323 4.50e-37 133
MsG0780035980.01.T01 MTR_6g081280 40.094 212 103 7 48 248 42 240 4.55e-37 131
MsG0780035980.01.T01 MTR_1g015730 41.228 228 96 10 46 247 178 393 5.23e-37 134
MsG0780035980.01.T01 MTR_5g096710 40.284 211 105 7 48 248 199 398 9.04e-37 134
MsG0780035980.01.T01 MTR_7g058630 47.586 145 72 3 108 248 35 179 3.12e-36 127
MsG0780035980.01.T01 MTR_7g062100 40.777 206 107 5 52 248 197 396 1.34e-35 130
MsG0780035980.01.T01 MTR_8g030630 45.098 153 83 1 79 230 86 238 1.47e-35 131
MsG0780035980.01.T01 MTR_8g030630 37.778 180 88 3 52 229 283 440 1.13e-28 112
MsG0780035980.01.T01 MTR_7g056820 38.000 200 116 4 51 247 179 373 1.90e-35 130
MsG0780035980.01.T01 MTR_1g015740 36.321 212 84 5 52 247 149 325 2.25e-35 129
MsG0780035980.01.T01 MTR_7g066000 37.037 216 106 6 48 247 200 401 4.48e-35 129
MsG0780035980.01.T01 MTR_7g061940 41.899 179 83 5 52 222 101 266 5.91e-35 126
MsG0780035980.01.T01 MTR_5g069950 41.014 217 74 9 20 192 2 208 6.16e-35 124
MsG0780035980.01.T01 MTR_4g020000 42.857 189 103 4 48 234 141 326 7.95e-35 128
MsG0780035980.01.T01 MTR_7g078960 38.528 231 94 9 47 248 75 286 1.57e-34 125
MsG0780035980.01.T01 MTR_2g437110 41.204 216 81 9 48 248 208 392 2.54e-33 126
MsG0780035980.01.T01 MTR_7g056760 35.577 208 113 5 53 250 210 406 1.02e-32 123
MsG0780035980.01.T01 MTR_4g128320 34.483 290 96 10 4 232 3 259 1.81e-32 120
MsG0780035980.01.T01 MTR_4g030790 46.203 158 70 5 52 200 158 309 2.84e-32 120
MsG0780035980.01.T01 MTR_7g077070 39.706 204 95 8 47 231 203 397 2.95e-32 122
MsG0780035980.01.T01 MTR_7g022600 40.376 213 108 9 53 248 211 421 3.36e-32 122
MsG0780035980.01.T01 MTR_7g078880 35.498 231 99 6 45 245 101 311 3.81e-32 121
MsG0780035980.01.T01 MTR_0128s0110 36.453 203 120 5 51 247 3 202 5.56e-32 117
MsG0780035980.01.T01 MTR_7g056797 36.364 209 112 5 53 250 206 404 2.45e-31 119
MsG0780035980.01.T01 MTR_0097s0030 39.091 220 99 7 52 250 184 389 8.62e-31 117
MsG0780035980.01.T01 MTR_2g047240 39.091 220 99 7 52 250 184 389 8.62e-31 117
MsG0780035980.01.T01 MTR_6g017270 53.226 124 44 3 137 248 219 340 2.72e-30 115
MsG0780035980.01.T01 MTR_7g056170 39.535 215 83 7 52 248 274 459 6.02e-30 116
MsG0780035980.01.T01 MTR_4g037465 37.198 207 118 6 48 247 191 392 8.20e-30 115
MsG0780035980.01.T01 MTR_3g055000 41.007 139 65 3 114 248 1 126 4.25e-29 107
MsG0780035980.01.T01 MTR_0267s0050 35.749 207 125 4 48 250 183 385 1.80e-28 111
MsG0780035980.01.T01 MTR_3g013950 34.783 207 127 4 48 250 185 387 8.10e-28 110
MsG0780035980.01.T01 MTR_1g047490 56.842 95 41 0 81 175 207 301 1.62e-27 107
MsG0780035980.01.T01 MTR_7g445750 43.609 133 55 2 48 169 208 331 2.68e-26 104
MsG0780035980.01.T01 MTR_4g030760 35.648 216 98 8 48 247 239 429 5.44e-26 105
MsG0780035980.01.T01 MTR_7g061100 64.557 79 26 2 48 125 145 222 1.09e-25 103
MsG0780035980.01.T01 MTR_5g011350 48.305 118 55 4 43 159 134 246 1.54e-25 101
MsG0780035980.01.T01 MTR_7g066010 32.273 220 93 5 43 250 196 371 5.84e-25 102
MsG0780035980.01.T01 MTR_7g445580 45.536 112 51 2 123 231 42 146 6.48e-25 96.7
MsG0780035980.01.T01 MTR_2g021150 35.323 201 106 9 52 248 188 368 6.81e-25 101
MsG0780035980.01.T01 MTR_7g070440 32.677 254 144 7 3 247 135 370 1.50e-24 100
MsG0780035980.01.T01 MTR_7g056793 34.804 204 84 7 49 247 71 230 2.51e-24 97.4
MsG0780035980.01.T01 MTR_7g089830 42.958 142 55 4 79 213 9 131 9.92e-24 93.6
MsG0780035980.01.T01 MTR_7g062070 41.525 118 64 3 117 230 75 191 3.20e-23 94.0
MsG0780035980.01.T01 MTR_7g070937 50.962 104 44 1 48 144 39 142 4.79e-23 92.4
MsG0780035980.01.T01 MTR_4g030110 32.231 242 127 9 5 231 157 376 7.85e-23 96.3
MsG0780035980.01.T01 MTR_7g070900 38.889 144 51 2 48 184 264 377 2.54e-22 95.5
MsG0780035980.01.T01 MTR_7g021580 56.977 86 36 1 165 250 218 302 3.74e-22 93.2
MsG0780035980.01.T01 MTR_7g056023 46.218 119 54 4 52 162 162 278 4.47e-22 92.4
MsG0780035980.01.T01 MTR_7g060930 53.165 79 36 1 88 166 1 78 5.50e-22 87.0
MsG0780035980.01.T01 MTR_4g024910 41.525 118 64 2 137 249 149 266 5.40e-21 90.5
MsG0780035980.01.T01 MTR_7g056560 75.862 58 12 2 76 133 126 181 5.44e-21 88.2
MsG0780035980.01.T01 MTR_8g101940 37.895 190 72 9 79 247 202 366 1.09e-20 90.1
MsG0780035980.01.T01 MTR_7g061130 51.111 90 42 1 163 250 1 90 2.81e-20 82.8
MsG0780035980.01.T01 MTR_3g055070 37.398 123 62 3 114 235 1 109 8.39e-20 83.6
MsG0780035980.01.T01 MTR_0354s0030 51.064 94 37 2 163 247 1 94 2.08e-19 80.9
MsG0780035980.01.T01 MTR_7g058660 44.444 108 50 3 147 244 103 210 1.12e-18 82.0
MsG0780035980.01.T01 MTR_1g097330 29.487 234 133 7 3 225 127 339 3.97e-18 83.2
MsG0780035980.01.T01 MTR_7g078940 31.050 219 75 6 52 248 237 401 1.97e-17 81.3
MsG0780035980.01.T01 MTR_2g060555 33.679 193 99 8 53 240 111 279 2.53e-17 79.7
MsG0780035980.01.T01 MTR_3g011020 30.319 188 107 7 48 232 190 356 3.02e-17 80.5
MsG0780035980.01.T01 MTR_1g016960 45.714 105 43 3 155 247 152 254 2.19e-16 76.6
MsG0780035980.01.T01 MTR_1g050542 36.296 135 68 5 52 183 221 340 4.28e-16 77.4
MsG0780035980.01.T01 MTR_2g046920 29.851 201 115 5 52 248 194 372 7.91e-16 76.3
MsG0780035980.01.T01 MTR_1g054575 34.091 132 74 3 52 183 218 336 1.63e-15 75.9
MsG0780035980.01.T01 MTR_6g048150 45.745 94 42 3 160 245 13 105 2.45e-15 70.9
MsG0780035980.01.T01 MTR_3g009300 28.431 204 116 7 52 250 176 354 4.31e-15 73.9
MsG0780035980.01.T01 MTR_2g029990 30.769 208 116 10 48 250 220 404 4.96e-15 74.3
MsG0780035980.01.T01 MTR_2g021190 28.910 211 119 8 45 250 190 374 5.78e-15 73.9
MsG0780035980.01.T01 MTR_1g097490 30.508 177 95 5 52 228 220 368 6.60e-15 73.9
MsG0780035980.01.T01 MTR_4g061340 31.280 211 111 6 42 250 199 377 1.03e-14 73.2
MsG0780035980.01.T01 MTR_5g022420 28.333 240 133 10 11 235 141 356 1.11e-14 73.2
MsG0780035980.01.T01 MTR_2g046900 31.280 211 114 8 47 248 196 384 3.65e-14 71.6
MsG0780035980.01.T01 MTR_8g101580 28.218 202 118 7 52 248 215 394 4.31e-14 71.6
MsG0780035980.01.T01 MTR_3g014570 28.108 185 114 4 48 232 199 364 9.01e-14 70.5
MsG0780035980.01.T01 MTR_1g094210 31.579 133 76 4 46 178 215 332 1.20e-13 70.1
MsG0780035980.01.T01 MTR_1g094210 31.579 133 76 4 46 178 215 332 1.29e-13 70.1
MsG0780035980.01.T01 MTR_3g007270 31.579 133 75 3 48 180 229 345 1.64e-13 69.7
MsG0780035980.01.T01 MTR_2g055970 32.847 137 78 4 53 186 379 504 2.60e-13 69.3
MsG0780035980.01.T01 MTR_1g097370 32.653 196 96 10 49 228 160 335 3.03e-13 69.3
MsG0780035980.01.T01 MTR_2g021155 29.885 174 100 5 57 229 212 364 5.81e-13 68.6
MsG0780035980.01.T01 MTR_1g097510 33.094 139 75 5 48 183 85 208 6.35e-13 67.4
MsG0780035980.01.T01 MTR_2g046860 30.588 170 99 4 47 213 80 233 9.39e-13 67.0
MsG0780035980.01.T01 MTR_3g014540 28.877 187 109 7 48 232 199 363 1.40e-12 67.0
MsG0780035980.01.T01 MTR_4g108810 31.361 169 84 6 24 186 33 175 1.99e-12 65.5
MsG0780035980.01.T01 MTR_3g436150 32.847 137 76 5 48 182 213 335 2.20e-12 66.2
MsG0780035980.01.T01 MTR_2g046830 31.515 165 89 6 52 211 194 339 3.54e-12 65.9
MsG0780035980.01.T01 MTR_6g065980 26.066 211 124 8 48 250 174 360 3.71e-12 65.5
MsG0780035980.01.T01 MTR_6g053260 36.496 137 64 7 48 180 509 626 4.96e-12 65.9
MsG0780035980.01.T01 MTR_2g021252 34.483 145 79 7 110 250 254 386 5.94e-12 65.1
MsG0780035980.01.T01 MTR_4g053470 31.073 177 72 7 48 211 159 298 9.65e-12 64.3
MsG0780035980.01.T01 MTR_8g467140 33.824 136 75 5 53 185 200 323 1.30e-11 63.9
MsG0780035980.01.T01 MTR_7g066040 40.000 85 44 1 48 125 112 196 2.39e-11 62.4
MsG0780035980.01.T01 MTR_4g132560 27.273 209 126 6 46 248 70 258 2.54e-11 62.4
MsG0780035980.01.T01 MTR_3g024040 29.808 208 108 12 52 250 196 374 4.02e-11 62.8
MsG0780035980.01.T01 MTR_3g006640 25.806 217 126 11 48 250 99 294 4.02e-11 62.4
MsG0780035980.01.T01 MTR_0044s0300 28.155 206 117 8 53 250 209 391 6.60e-11 62.0
MsG0780035980.01.T01 MTR_2g047832 31.285 179 95 6 52 213 198 365 7.40e-11 62.0
MsG0780035980.01.T01 MTR_3g024130 30.108 186 98 8 48 227 136 295 8.64e-11 61.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score

Find 41 sgRNAs with CRISPR-Local

Find 89 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GTTCAGCAATTCTCTATAAT+TGG 0.190826 7:-885198 MsG0780035980.01.T01:CDS
TGTGATTATTTCACTTGATT+TGG 0.214492 7:-885518 MsG0780035980.01.T01:CDS
GTATAACAAATGGCACTTCT+TGG 0.250156 7:+885455 None:intergenic
GTGATTATTTCACTTGATTT+GGG 0.327469 7:-885517 MsG0780035980.01.T01:CDS
TCATTTAACACACTTAGATT+TGG 0.346624 7:+885433 None:intergenic
TCAATTCGGGCGATAATGTT+TGG 0.362282 7:-885684 MsG0780035980.01.T01:CDS
ATGGACGTTGTTCATCTTAG+TGG 0.407082 7:-885619 MsG0780035980.01.T01:CDS
TGTGTCAACAATACGTCTTT+CGG 0.408481 7:-885260 MsG0780035980.01.T01:CDS
AATTGCTGAACTTTCACAAT+TGG 0.415735 7:+885210 None:intergenic
ATGTATAGATGATGAGCTAC+AGG 0.424407 7:+885643 None:intergenic
CGCTGCCACCACGACTTAGA+TGG 0.426674 7:+886262 None:intergenic
AATTTCAAGTTGAAGAGTCT+TGG 0.426851 7:-885351 MsG0780035980.01.T01:CDS
CTTAGATTTGGTATAACAAA+TGG 0.432415 7:+885445 None:intergenic
CCAGGATTATGTTGAAAGCT+TGG 0.435930 7:-885128 MsG0780035980.01.T01:CDS
ATCTTGGTGGTTCAATGTCC+AGG 0.439958 7:-885146 MsG0780035980.01.T01:CDS
TTCCAACGTGTCACCGTCCT+CGG 0.452534 7:-886236 MsG0780035980.01.T01:CDS
ACTTCAGCGATAAGTTCGTC+AGG 0.462819 7:+886205 None:intergenic
TAAAGAGAATCAATAAATCT+TGG 0.465661 7:-885162 MsG0780035980.01.T01:CDS
ATGCACTTCAGTCGCATCAA+TGG 0.483274 7:+886160 None:intergenic
CCAAGCTTTCAACATAATCC+TGG 0.515036 7:+885128 None:intergenic
AGCTCATCATCTATACATGA+TGG 0.555528 7:-885638 MsG0780035980.01.T01:CDS
TACCGAGGACGGTGACACGT+TGG 0.576518 7:+886234 None:intergenic
TCTCAATTACTCCCTCCTCA+AGG 0.593959 7:-885481 MsG0780035980.01.T01:CDS
TCCTCCCTCCATCTAAGTCG+TGG 0.593994 7:-886270 MsG0780035980.01.T01:CDS
AGAGAATCAATAAATCTTGG+TGG 0.599323 7:-885159 MsG0780035980.01.T01:CDS
GGCACTTCTTGGAAACCTTG+AGG 0.601880 7:+885466 None:intergenic
CGATGAGGACTACGATTGCA+AGG 0.602846 7:-885563 MsG0780035980.01.T01:CDS
CTTCTTGGAAACCTTGAGGA+GGG 0.605335 7:+885470 None:intergenic
TGCCACCACGACTTAGATGG+AGG 0.611684 7:+886265 None:intergenic
TATTTCACTTGATTTGGGCA+CGG 0.612849 7:-885512 MsG0780035980.01.T01:CDS
ACTTCTTGGAAACCTTGAGG+AGG 0.620274 7:+885469 None:intergenic
TGTATAGATGATGAGCTACA+GGG 0.624846 7:+885644 None:intergenic
GCCACCACGACTTAGATGGA+GGG 0.650775 7:+886266 None:intergenic
TCCCTCCATCTAAGTCGTGG+TGG 0.650853 7:-886267 MsG0780035980.01.T01:CDS
ACCACGACTTAGATGGAGGG+AGG 0.669604 7:+886269 None:intergenic
GTATAGATGATGAGCTACAG+GGG 0.670104 7:+885645 None:intergenic
CTTCAGCGATAAGTTCGTCA+GGG 0.676254 7:+886206 None:intergenic
CAGCGATAAGTTCGTCAGGG+AGG 0.683258 7:+886209 None:intergenic
TCAGGGAGGAATACCGAGGA+CGG 0.683420 7:+886223 None:intergenic
AATTCGCAATTACAACGATG+AGG 0.715121 7:-885578 MsG0780035980.01.T01:CDS
TTCGTCAGGGAGGAATACCG+AGG 0.743016 7:+886219 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! GATTATGATAACTAATTTTA+AGG + Chr7:886074-886093 None:intergenic 15.0%
!! TAAAGAGAATCAATAAATCT+TGG - Chr7:886229-886248 MsG0780035980.01.T01:CDS 20.0%
!!! AACAAACAGAATTTTCAATT+CGG - Chr7:885693-885712 MsG0780035980.01.T01:CDS 20.0%
!!! AACAAACTCATTTTGTTATT+TGG - Chr7:886007-886026 MsG0780035980.01.T01:intron 20.0%
! ATGAATAACCATGAAGTATA+CGG + Chr7:885379-885398 None:intergenic 25.0%
! ATTAAGATGCAATTTGACAA+AGG + Chr7:885292-885311 None:intergenic 25.0%
! CACTATTCTAATCTCAAATT+TGG - Chr7:885618-885637 MsG0780035980.01.T01:CDS 25.0%
! GTGATTATTTCACTTGATTT+GGG - Chr7:885874-885893 MsG0780035980.01.T01:intron 25.0%
! TAGTTCAACTGACATTTATA+AGG - Chr7:885647-885666 MsG0780035980.01.T01:CDS 25.0%
! TCATTTAACACACTTAGATT+TGG + Chr7:885961-885980 None:intergenic 25.0%
! TGTGATTATTTCACTTGATT+TGG - Chr7:885873-885892 MsG0780035980.01.T01:intron 25.0%
!! ACAAACAGAATTTTCAATTC+GGG - Chr7:885694-885713 MsG0780035980.01.T01:CDS 25.0%
!! CTTAGATTTGGTATAACAAA+TGG + Chr7:885949-885968 None:intergenic 25.0%
!!! ATCTTAGTGGTAGTTTTAAT+TGG - Chr7:885785-885804 MsG0780035980.01.T01:intron 25.0%
!!! TTTTTTTGATATTGTCCTTG+TGG + Chr7:885568-885587 None:intergenic 25.0%
AATTGCTGAACTTTCACAAT+TGG + Chr7:886184-886203 None:intergenic 30.0%
AGAGAATCAATAAATCTTGG+TGG - Chr7:886232-886251 MsG0780035980.01.T01:CDS 30.0%
AGGACAATATCAAAAAAACC+AGG - Chr7:885570-885589 MsG0780035980.01.T01:CDS 30.0%
GGACAATATCAAAAAAACCA+GGG - Chr7:885571-885590 MsG0780035980.01.T01:CDS 30.0%
GTTCAGCAATTCTCTATAAT+TGG - Chr7:886193-886212 MsG0780035980.01.T01:CDS 30.0%
TTCAACTGACATTTATAAGG+TGG - Chr7:885650-885669 MsG0780035980.01.T01:CDS 30.0%
! TTAGGTTATTCTTTTGCCAA+TGG - Chr7:885510-885529 MsG0780035980.01.T01:CDS 30.0%
!! AAAATTCTGTTTGTTGTCTC+TGG + Chr7:885688-885707 None:intergenic 30.0%
!! AATTTCAAGTTGAAGAGTCT+TGG - Chr7:886040-886059 MsG0780035980.01.T01:intron 30.0%
!!! TAGTGGTAGTTTTAATTGGT+TGG - Chr7:885789-885808 MsG0780035980.01.T01:intron 30.0%
!!! TTTTGTTATTTGGCAGATGA+AGG - Chr7:886017-886036 MsG0780035980.01.T01:intron 30.0%
AAATACTGCTGCCATATTGT+TGG - Chr7:885462-885481 MsG0780035980.01.T01:CDS 35.0%
AAGATGCAATTTGACAAAGG+TGG + Chr7:885289-885308 None:intergenic 35.0%
AATTCGCAATTACAACGATG+AGG - Chr7:885813-885832 MsG0780035980.01.T01:intron 35.0%
AGATGCAATTTGACAAAGGT+GGG + Chr7:885288-885307 None:intergenic 35.0%
AGCATTTGTATCTTACCAGA+CGG - Chr7:885335-885354 MsG0780035980.01.T01:CDS 35.0%
AGCTCATCATCTATACATGA+TGG - Chr7:885753-885772 MsG0780035980.01.T01:intron 35.0%
ATGTATAGATGATGAGCTAC+AGG + Chr7:885751-885770 None:intergenic 35.0%
GTATAACAAATGGCACTTCT+TGG + Chr7:885939-885958 None:intergenic 35.0%
TCTGGTAAGATACAAATGCT+AGG + Chr7:885335-885354 None:intergenic 35.0%
TGTATAGATGATGAGCTACA+GGG + Chr7:885750-885769 None:intergenic 35.0%
TGTGTCAACAATACGTCTTT+CGG - Chr7:886131-886150 MsG0780035980.01.T01:intron 35.0%
TTTGATATTGTCCTTGTGGT+CGG + Chr7:885564-885583 None:intergenic 35.0%
!! AATGGATTGCTCTGTTTGTT+AGG - Chr7:885492-885511 MsG0780035980.01.T01:CDS 35.0%
!! AGTTGATAGTAAGGATCTTC+AGG + Chr7:885435-885454 None:intergenic 35.0%
!! CAATGGTTTTACTTGAAGGA+AGG + Chr7:885217-885236 None:intergenic 35.0%
!! GCATCAATGGTTTTACTTGA+AGG + Chr7:885221-885240 None:intergenic 35.0%
!! TATTTCACTTGATTTGGGCA+CGG - Chr7:885879-885898 MsG0780035980.01.T01:intron 35.0%
!! TCAGGAAGATTGATAATGAC+CGG + Chr7:885417-885436 None:intergenic 35.0%
!! TTGTCTGCAAGTTGATAGTA+AGG + Chr7:885444-885463 None:intergenic 35.0%
AAGCCACATTTCGTATCCAT+TGG + Chr7:885529-885548 None:intergenic 40.0%
ATGGACGTTGTTCATCTTAG+TGG - Chr7:885772-885791 MsG0780035980.01.T01:intron 40.0%
CATTGCAGGAACCAACAATA+TGG + Chr7:885476-885495 None:intergenic 40.0%
CCAAGCTTTCAACATAATCC+TGG + Chr7:886266-886285 None:intergenic 40.0%
CCAGGATTATGTTGAAAGCT+TGG - Chr7:886263-886282 MsG0780035980.01.T01:CDS 40.0%
GCATTTGTATCTTACCAGAC+GGG - Chr7:885336-885355 MsG0780035980.01.T01:CDS 40.0%
GTATAGATGATGAGCTACAG+GGG + Chr7:885749-885768 None:intergenic 40.0%
GTCATGGAATACTCTCATCT+CGG - Chr7:885260-885279 MsG0780035980.01.T01:CDS 40.0%
TCAATTCGGGCGATAATGTT+TGG - Chr7:885707-885726 MsG0780035980.01.T01:intron 40.0%
TGAAGTGCATGAGTAAGTCA+TGG - Chr7:885244-885263 MsG0780035980.01.T01:CDS 40.0%
TTGATATTGTCCTTGTGGTC+GGG + Chr7:885563-885582 None:intergenic 40.0%
TTGCCAATGGATACGAAATG+TGG - Chr7:885523-885542 MsG0780035980.01.T01:CDS 40.0%
! ACGAAATGTGGCTTCGTTTT+TGG - Chr7:885535-885554 MsG0780035980.01.T01:CDS 40.0%
!! CATATTGTTGGTTCCTGCAA+TGG - Chr7:885474-885493 MsG0780035980.01.T01:CDS 40.0%
!! GAAGATTGATAATGACCGGA+GGG + Chr7:885413-885432 None:intergenic 40.0%
!! TATCTTACCAGACGGGTTTT+TGG - Chr7:885343-885362 MsG0780035980.01.T01:CDS 40.0%
AAGCAGGACCGTATACTTCA+TGG - Chr7:885368-885387 MsG0780035980.01.T01:CDS 45.0%
ACTTCAGCGATAAGTTCGTC+AGG + Chr7:885189-885208 None:intergenic 45.0%
ACTTCTTGGAAACCTTGAGG+AGG + Chr7:885925-885944 None:intergenic 45.0%
ATGCACTTCAGTCGCATCAA+TGG + Chr7:885234-885253 None:intergenic 45.0%
CAAACAGAGCAATCCATTGC+AGG + Chr7:885490-885509 None:intergenic 45.0%
CTTCAGCGATAAGTTCGTCA+GGG + Chr7:885188-885207 None:intergenic 45.0%
CTTCTTGGAAACCTTGAGGA+GGG + Chr7:885924-885943 None:intergenic 45.0%
TCATTTGCATGAGAACCCTC+CGG - Chr7:885395-885414 MsG0780035980.01.T01:CDS 45.0%
TCTCAATTACTCCCTCCTCA+AGG - Chr7:885910-885929 MsG0780035980.01.T01:intron 45.0%
! ATCTTGGTGGTTCAATGTCC+AGG - Chr7:886245-886264 MsG0780035980.01.T01:CDS 45.0%
!! GGAAGATTGATAATGACCGG+AGG + Chr7:885414-885433 None:intergenic 45.0%
CGATGAGGACTACGATTGCA+AGG - Chr7:885828-885847 MsG0780035980.01.T01:intron 50.0%
GGCACTTCTTGGAAACCTTG+AGG + Chr7:885928-885947 None:intergenic 50.0%
TGCTTGTCCAAAAACCCGTC+TGG + Chr7:885353-885372 None:intergenic 50.0%
!! AGACGGGTTTTTGGACAAGC+AGG - Chr7:885352-885371 MsG0780035980.01.T01:CDS 50.0%
!!! GTTTTTGGAACCCGACCACA+AGG - Chr7:885550-885569 MsG0780035980.01.T01:CDS 50.0%
ACCACGACTTAGATGGAGGG+AGG + Chr7:885125-885144 None:intergenic 55.0%
CAGCGATAAGTTCGTCAGGG+AGG + Chr7:885185-885204 None:intergenic 55.0%
CTGTCAACACGACAAGACCC+TGG + Chr7:885591-885610 None:intergenic 55.0%
GCCACCACGACTTAGATGGA+GGG + Chr7:885128-885147 None:intergenic 55.0%
TCAGGGAGGAATACCGAGGA+CGG + Chr7:885171-885190 None:intergenic 55.0%
TCCCTCCATCTAAGTCGTGG+TGG - Chr7:885124-885143 MsG0780035980.01.T01:CDS 55.0%
TCCTCCCTCCATCTAAGTCG+TGG - Chr7:885121-885140 MsG0780035980.01.T01:CDS 55.0%
TGCCACCACGACTTAGATGG+AGG + Chr7:885129-885148 None:intergenic 55.0%
TTCCAACGTGTCACCGTCCT+CGG - Chr7:885155-885174 MsG0780035980.01.T01:CDS 55.0%
TTCGTCAGGGAGGAATACCG+AGG + Chr7:885175-885194 None:intergenic 55.0%
CGCTGCCACCACGACTTAGA+TGG + Chr7:885132-885151 None:intergenic 60.0%
TACCGAGGACGGTGACACGT+TGG + Chr7:885160-885179 None:intergenic 60.0%
Chromosome Type Strat End Strand Name
Chr7 gene 885114 886299 885114 ID=MsG0780035980.01;Name=MsG0780035980.01
Chr7 mRNA 885114 886299 885114 ID=MsG0780035980.01.T01;Parent=MsG0780035980.01;Name=MsG0780035980.01.T01;_AED=0.44;_eAED=0.44;_QI=0|0|0|1|1|1|2|0|250
Chr7 exon 886158 886299 886158 ID=MsG0780035980.01.T01:exon:6403;Parent=MsG0780035980.01.T01
Chr7 exon 885114 885724 885114 ID=MsG0780035980.01.T01:exon:6402;Parent=MsG0780035980.01.T01
Chr7 CDS 886158 886299 886158 ID=MsG0780035980.01.T01:cds;Parent=MsG0780035980.01.T01
Chr7 CDS 885114 885724 885114 ID=MsG0780035980.01.T01:cds;Parent=MsG0780035980.01.T01
Gene Sequence

>MsG0780035980.01.T01

ATGATTCTCCTCCCTCCATCTAAGTCGTGGTGGCAGCGTACTTCCAACGTGTCACCGTCCTCGGTATTCCTCCCTGACGAACTTATCGCTGAAGTGCTTTCCTTCCTTCAAGTAAAACCATTGATGCGACTGAAGTGCATGAAGACAACAAACAGAATTTTCAATTCGGGCGATAATGTTTGGAGAAATATTCAAAATTCCCCTGTAGCTCATCATCTATACATGATGGACGTTGTTCATCTTAGTGGTAGTTTTAATTGGTTGGCAATTCGCAATTACAACGATGAGGACTACGATTGCAAGGATATTGATACTGTTGAGCAATTTGTGATTATTTCACTTGATTTGGGCACGGAGACACATTCTCAATTACTCCCTCCTCAAGGTTTCCAAGAAGTGCCATTTGTTATACCAAATCTAAGTGTGTTAAATGATTGTCTTTGTTTTTGTCATGATTTCAAACAAACTCATTTTGTTATTTGGCAGATGAAGGAATTTCAAGTTGAAGAGTCTTGGACTCAATTCCTTAAAATTAGTTATCATAATCTTCAAACAGATAATAACTTTAATTACTTGAACTTTTATGTGTCAACAATACGTCTTTCGGAGAAGAGTGATACACTATTATTGACAACCAATTGTGAAAGTTCAGCAATTCTCTATAATTGGAGAGATAAAAGCGTAAAGAGAATCAATAAATCTTGGTGGTTCAATGTCCAGGATTATGTTGAAAGCTTGGTTACGTATTGTTGA
Protein sequence

>MsG0780035980.01.T01

MILLPPSKSWWQRTSNVSPSSVFLPDELIAEVLSFLQVKPLMRLKCMKTTNRIFNSGDNVWRNIQNSPVAHHLYMMDVVHLSGSFNWLAIRNYNDEDYDCKDIDTVEQFVIISLDLGTETHSQLLPPQGFQEVPFVIPNLSVLNDCLCFCHDFKQTHFVIWQMKEFQVEESWTQFLKISYHNLQTDNNFNYLNFYVSTIRLSEKSDTLLLTTNCESSAILYNWRDKSVKRINKSWWFNVQDYVESLVTYC*