AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0280008684.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0280008684.01.T01 MTR_2g047878 74.619 394 62 6 1 385 1 365 0.0 573
MsG0280008684.01.T01 MTR_2g047895 90.164 305 29 1 75 378 1 305 0.0 568
MsG0280008684.01.T01 MTR_0649s0020 56.995 386 141 11 19 385 10 389 8.95e-138 398
MsG0280008684.01.T01 MTR_2g047892 49.877 407 163 15 6 385 6 398 2.63e-112 334
MsG0280008684.01.T01 MTR_2g047200 47.970 394 167 10 15 384 15 394 2.07e-109 326
MsG0280008684.01.T01 MTR_0097s0030 47.525 404 170 15 8 385 2 389 4.14e-104 313
MsG0280008684.01.T01 MTR_2g047240 47.525 404 170 15 8 385 2 389 4.14e-104 313
MsG0280008684.01.T01 MTR_7g056290 39.683 441 189 17 1 384 1 421 2.22e-90 278
MsG0280008684.01.T01 MTR_7g056390 40.421 428 190 16 6 383 4 416 1.35e-89 276
MsG0280008684.01.T01 MTR_4g013180 41.878 394 183 13 14 376 4 382 1.93e-89 278
MsG0280008684.01.T01 MTR_7g056003 40.976 410 183 12 19 384 14 408 2.69e-88 273
MsG0280008684.01.T01 MTR_2g043410 40.826 436 187 16 1 384 1 417 8.41e-88 272
MsG0280008684.01.T01 MTR_3g072470 39.310 435 196 17 1 384 1 418 9.06e-84 261
MsG0280008684.01.T01 MTR_7g091630 40.385 416 187 16 16 383 28 430 3.83e-83 260
MsG0280008684.01.T01 MTR_2g043400 40.909 418 180 12 16 384 19 418 8.15e-83 259
MsG0280008684.01.T01 MTR_5g068040 39.801 402 201 12 5 385 1 382 6.29e-81 253
MsG0280008684.01.T01 MTR_7g057270 38.173 427 202 17 5 383 1 413 8.62e-81 254
MsG0280008684.01.T01 MTR_6g055210 39.320 412 190 11 20 384 22 420 2.06e-80 254
MsG0280008684.01.T01 MTR_0464s0020 38.952 439 196 14 7 384 2 429 3.94e-80 252
MsG0280008684.01.T01 MTR_4g129190 40.712 393 195 12 20 383 6 389 7.44e-80 250
MsG0280008684.01.T01 MTR_3g437520 39.250 400 187 10 16 368 19 409 1.22e-79 252
MsG0280008684.01.T01 MTR_7g055987 43.505 331 144 10 15 331 16 317 1.73e-79 249
MsG0280008684.01.T01 MTR_7g056503 39.320 412 200 15 6 385 6 399 2.60e-79 249
MsG0280008684.01.T01 MTR_6g016285 40.235 425 175 16 16 384 17 418 6.35e-79 249
MsG0280008684.01.T01 MTR_1g088120 37.470 419 205 14 12 383 2 410 2.37e-78 247
MsG0280008684.01.T01 MTR_3g464470 40.247 405 183 18 14 384 1 380 8.05e-77 242
MsG0280008684.01.T01 MTR_3g464500 39.506 405 197 14 10 384 17 403 2.46e-76 242
MsG0280008684.01.T01 MTR_5g056020 38.717 421 208 13 10 385 7 422 2.80e-76 244
MsG0280008684.01.T01 MTR_4g013185 37.156 436 196 15 15 385 5 427 6.08e-75 239
MsG0280008684.01.T01 MTR_7g066840 41.320 409 187 18 9 384 10 398 1.01e-74 238
MsG0280008684.01.T01 MTR_7g055930 37.381 420 203 12 19 384 12 425 1.60e-74 238
MsG0280008684.01.T01 MTR_7g078900 36.667 420 197 14 22 383 14 422 3.85e-74 237
MsG0280008684.01.T01 MTR_0128s0020 39.950 398 185 14 18 382 16 392 5.71e-74 235
MsG0280008684.01.T01 MTR_7g078840 36.259 433 208 14 16 385 6 433 1.19e-73 236
MsG0280008684.01.T01 MTR_6g092560 38.631 409 187 15 18 384 10 396 1.77e-73 236
MsG0280008684.01.T01 MTR_4g033495 39.633 381 179 13 16 362 23 386 3.24e-73 235
MsG0280008684.01.T01 MTR_6g086920 36.659 461 180 16 15 384 31 470 5.70e-73 236
MsG0280008684.01.T01 MTR_0128s0070 39.348 399 187 16 20 385 22 398 5.91e-73 233
MsG0280008684.01.T01 MTR_7g055870 37.237 427 194 13 19 384 12 425 1.24e-72 233
MsG0280008684.01.T01 MTR_5g069760 38.363 391 199 13 16 385 2 371 1.95e-72 231
MsG0280008684.01.T01 MTR_7g050520 38.402 388 186 11 9 365 5 370 5.79e-72 230
MsG0280008684.01.T01 MTR_0707s0020 36.689 447 185 16 15 384 19 444 7.52e-72 231
MsG0280008684.01.T01 MTR_7g056200 38.213 403 176 16 16 384 19 382 1.75e-71 229
MsG0280008684.01.T01 MTR_8g066440 40.295 407 201 16 6 383 8 401 2.05e-71 229
MsG0280008684.01.T01 MTR_7g050480 38.402 388 186 11 9 365 5 370 2.17e-71 229
MsG0280008684.01.T01 MTR_3g080370 39.409 406 169 17 34 384 35 418 4.49e-71 229
MsG0280008684.01.T01 MTR_7g060940 36.893 412 197 15 9 382 6 392 4.96e-71 228
MsG0280008684.01.T01 MTR_7g022600 37.813 439 201 18 1 384 1 422 6.38e-71 228
MsG0280008684.01.T01 MTR_7g028660 38.191 398 196 13 15 385 6 380 1.16e-70 226
MsG0280008684.01.T01 MTR_7g056260 44.785 326 143 10 18 326 12 317 1.78e-70 224
MsG0280008684.01.T01 MTR_5g069930 37.343 399 199 17 16 385 2 378 1.89e-70 226
MsG0280008684.01.T01 MTR_7g052150 38.642 383 181 13 16 365 18 379 2.04e-70 226
MsG0280008684.01.T01 MTR_7g070830 36.364 418 204 17 14 383 17 420 2.15e-70 227
MsG0280008684.01.T01 MTR_7g062100 38.958 403 197 14 10 383 14 396 2.41e-70 226
MsG0280008684.01.T01 MTR_2g010950 35.167 418 218 17 5 383 1 404 2.42e-70 226
MsG0280008684.01.T01 MTR_4g030090 38.072 415 191 17 15 384 7 400 8.13e-70 225
MsG0280008684.01.T01 MTR_7g056760 36.842 418 198 15 10 385 13 406 1.35e-69 224
MsG0280008684.01.T01 MTR_7g077070 36.977 430 207 20 11 383 7 429 2.19e-69 224
MsG0280008684.01.T01 MTR_1g071010 38.686 411 194 16 7 384 2 387 2.67e-69 223
MsG0280008684.01.T01 MTR_7g066030 38.557 402 199 15 17 385 18 404 3.18e-69 223
MsG0280008684.01.T01 MTR_7g066100 37.592 407 193 17 17 383 8 393 7.44e-69 222
MsG0280008684.01.T01 MTR_7g061090 36.118 407 204 14 15 383 17 405 9.23e-69 222
MsG0280008684.01.T01 MTR_7g066850 39.416 411 179 20 18 384 21 405 2.72e-68 223
MsG0280008684.01.T01 MTR_7g091640 40.805 348 163 12 4 326 15 344 2.77e-68 220
MsG0280008684.01.T01 MTR_4g030830 36.855 407 196 14 19 384 8 394 9.69e-68 219
MsG0280008684.01.T01 MTR_7g070880 35.885 418 206 17 14 383 17 420 1.21e-67 220
MsG0280008684.01.T01 MTR_0128s0010 36.473 414 197 17 9 384 13 398 2.01e-67 219
MsG0280008684.01.T01 MTR_7g056797 36.842 418 196 16 10 385 13 404 2.10e-67 219
MsG0280008684.01.T01 MTR_7g060960 38.402 388 189 14 5 382 19 366 2.67e-67 217
MsG0280008684.01.T01 MTR_4g031020 35.845 438 202 15 11 384 6 428 4.26e-67 219
MsG0280008684.01.T01 MTR_7g077990 34.615 416 201 14 7 380 4 390 4.97e-67 218
MsG0280008684.01.T01 MTR_7g061050 37.313 402 199 16 15 385 6 385 1.13e-66 216
MsG0280008684.01.T01 MTR_5g096710 37.624 404 192 17 17 384 20 399 2.14e-66 216
MsG0280008684.01.T01 MTR_4g013175 36.946 406 195 14 12 366 2 397 3.27e-66 216
MsG0280008684.01.T01 MTR_7g077970 36.682 428 194 17 20 383 7 421 5.77e-66 216
MsG0280008684.01.T01 MTR_1g442850 38.791 397 193 16 17 385 3 377 6.72e-66 214
MsG0280008684.01.T01 MTR_7g445890 37.221 403 184 13 18 384 14 383 7.79e-66 214
MsG0280008684.01.T01 MTR_4g019990 36.609 407 201 14 16 384 2 389 8.04e-66 214
MsG0280008684.01.T01 MTR_4g011660 35.577 416 211 13 15 384 14 418 1.18e-65 214
MsG0280008684.01.T01 MTR_7g079160 36.098 410 198 15 14 366 2 404 1.67e-65 216
MsG0280008684.01.T01 MTR_7g078040 34.368 419 187 14 16 366 5 403 4.10e-65 214
MsG0280008684.01.T01 MTR_7g052670 34.722 432 224 13 3 384 2 425 5.43e-65 214
MsG0280008684.01.T01 MTR_4g030980 36.111 432 199 15 16 384 11 428 5.60e-65 213
MsG0280008684.01.T01 MTR_7g062060 35.577 416 192 17 20 385 12 401 8.26e-65 212
MsG0280008684.01.T01 MTR_7g056717 36.893 412 204 18 1 383 1 385 6.94e-64 209
MsG0280008684.01.T01 MTR_4g008790 35.990 414 183 14 9 365 28 416 7.30e-64 211
MsG0280008684.01.T01 MTR_4g034860 35.616 365 179 11 47 368 49 400 2.51e-63 208
MsG0280008684.01.T01 MTR_7g056737 37.340 391 193 17 1 362 1 368 2.72e-63 208
MsG0280008684.01.T01 MTR_7g055830 35.516 397 174 11 19 384 12 357 4.13e-63 206
MsG0280008684.01.T01 MTR_7g055977 36.341 399 202 15 18 385 5 382 7.07e-63 206
MsG0280008684.01.T01 MTR_7g078860 36.364 396 185 14 16 365 5 379 1.57e-62 206
MsG0280008684.01.T01 MTR_4g024890 37.500 400 187 16 21 383 11 384 1.77e-62 205
MsG0280008684.01.T01 MTR_2g010920 32.420 438 227 15 1 383 1 424 5.49e-62 205
MsG0280008684.01.T01 MTR_0242s0060 34.913 401 192 14 16 364 5 388 1.48e-61 204
MsG0280008684.01.T01 MTR_0242s0040 34.913 401 192 14 16 364 5 388 1.48e-61 204
MsG0280008684.01.T01 MTR_7g061010 36.186 409 201 15 8 382 4 386 5.77e-61 201
MsG0280008684.01.T01 MTR_6g065510 42.264 265 131 7 137 385 74 332 1.17e-60 199
MsG0280008684.01.T01 MTR_7g066000 35.872 407 211 15 8 382 13 401 1.19e-60 201
MsG0280008684.01.T01 MTR_7g055953 44.664 253 108 8 151 385 78 316 1.38e-60 198
MsG0280008684.01.T01 MTR_7g061060 37.500 384 187 15 15 365 6 369 2.85e-60 200
MsG0280008684.01.T01 MTR_7g035295 34.928 418 193 17 7 384 2 380 6.97e-60 199
MsG0280008684.01.T01 MTR_6g017280 37.778 405 191 15 18 384 7 388 3.11e-59 197
MsG0280008684.01.T01 MTR_7g056710 35.484 403 212 15 3 382 2 379 4.48e-59 196
MsG0280008684.01.T01 MTR_7g113500 34.969 326 177 9 82 383 67 381 7.81e-59 196
MsG0280008684.01.T01 MTR_1g029650 33.962 424 200 16 15 382 3 402 1.30e-57 193
MsG0280008684.01.T01 MTR_5g043160 36.449 428 198 20 17 385 47 459 4.61e-57 193
MsG0280008684.01.T01 MTR_2g010900 37.785 307 162 11 38 326 1 296 6.39e-57 191
MsG0280008684.01.T01 MTR_2g006360 35.878 393 166 16 9 382 36 361 3.03e-56 188
MsG0280008684.01.T01 MTR_5g058620 43.629 259 100 10 165 384 31 282 3.73e-56 186
MsG0280008684.01.T01 MTR_1g058870 43.629 259 100 10 165 384 31 282 3.73e-56 186
MsG0280008684.01.T01 MTR_7g056570 35.872 407 209 17 3 383 2 382 7.86e-56 189
MsG0280008684.01.T01 MTR_7g445750 37.309 327 164 11 16 315 19 331 7.91e-55 184
MsG0280008684.01.T01 MTR_4g129160 39.489 352 147 13 17 326 4 331 8.25e-55 185
MsG0280008684.01.T01 MTR_4g030110 34.750 400 180 18 12 369 22 382 1.53e-54 184
MsG0280008684.01.T01 MTR_2g461450 39.441 322 146 10 16 326 14 297 1.71e-54 184
MsG0280008684.01.T01 MTR_7g066010 35.589 399 182 14 17 385 18 371 3.69e-54 183
MsG0280008684.01.T01 MTR_2g437110 35.561 419 180 18 15 384 16 393 1.88e-53 184
MsG0280008684.01.T01 MTR_7g056170 35.035 431 177 17 16 384 71 460 2.06e-53 184
MsG0280008684.01.T01 MTR_7g022670 32.593 405 177 13 11 385 14 352 3.83e-53 180
MsG0280008684.01.T01 MTR_1g015740 33.924 395 160 15 16 382 4 325 1.54e-51 175
MsG0280008684.01.T01 MTR_7g066060 34.383 413 211 16 12 384 15 407 3.03e-51 179
MsG0280008684.01.T01 MTR_7g077910 37.942 311 138 11 111 383 42 335 4.22e-51 174
MsG0280008684.01.T01 MTR_4g030790 36.716 335 145 14 6 326 3 284 6.39e-51 174
MsG0280008684.01.T01 MTR_3g013470 32.626 377 164 13 39 366 14 349 9.32e-51 174
MsG0280008684.01.T01 MTR_1g015730 32.870 432 188 16 13 382 2 393 4.94e-50 173
MsG0280008684.01.T01 MTR_1g047490 35.826 321 157 7 11 317 12 297 7.70e-50 170
MsG0280008684.01.T01 MTR_7g078940 34.625 387 170 16 14 361 25 367 3.90e-49 171
MsG0280008684.01.T01 MTR_4g037465 33.244 373 205 13 16 361 17 372 4.54e-49 171
MsG0280008684.01.T01 MTR_4g030760 33.094 417 189 17 10 384 63 431 1.50e-48 170
MsG0280008684.01.T01 MTR_7g056173 40.329 243 118 6 165 382 25 265 8.12e-48 165
MsG0280008684.01.T01 MTR_7g009265 36.909 317 154 10 100 383 20 323 8.82e-48 165
MsG0280008684.01.T01 MTR_6g088385 36.634 303 142 10 118 384 31 319 1.46e-46 162
MsG0280008684.01.T01 MTR_7g056820 31.750 400 205 17 19 382 6 373 2.36e-46 163
MsG0280008684.01.T01 MTR_7g034310 43.860 228 108 6 165 385 15 229 8.33e-46 157
MsG0280008684.01.T01 MTR_7g078960 35.855 304 139 12 118 383 1 286 7.59e-45 156
MsG0280008684.01.T01 MTR_7g037670 35.142 387 175 19 10 385 13 334 9.10e-45 157
MsG0280008684.01.T01 MTR_7g066080 32.644 435 213 16 8 384 3 415 1.90e-44 159
MsG0280008684.01.T01 MTR_1g112010 35.121 373 163 16 42 384 2 325 4.20e-44 155
MsG0280008684.01.T01 MTR_5g011350 42.991 214 94 9 86 297 51 238 7.70e-44 152
MsG0280008684.01.T01 MTR_6g017270 31.250 400 185 12 14 384 3 341 4.63e-43 153
MsG0280008684.01.T01 MTR_6g017295 36.538 312 139 10 100 364 30 329 2.07e-42 156
MsG0280008684.01.T01 MTR_6g017305 38.732 284 130 11 133 384 11 282 1.76e-41 147
MsG0280008684.01.T01 MTR_4g006350 30.244 410 223 14 12 382 488 873 1.02e-40 154
MsG0280008684.01.T01 MTR_1g055375 31.313 396 201 16 23 383 7 366 1.87e-39 144
MsG0280008684.01.T01 MTR_2g060555 37.363 273 121 11 118 369 30 273 8.66e-39 140
MsG0280008684.01.T01 MTR_2g021190 31.298 393 204 16 20 385 21 374 4.48e-38 140
MsG0280008684.01.T01 MTR_7g056023 33.439 314 150 12 7 307 10 277 8.86e-38 137
MsG0280008684.01.T01 MTR_7g006360 31.662 379 130 11 21 383 10 275 1.11e-37 137
MsG0280008684.01.T01 MTR_3g007330 30.123 405 215 16 5 385 34 394 2.81e-37 139
MsG0280008684.01.T01 MTR_8g101940 33.088 408 191 19 19 384 1 368 3.06e-37 138
MsG0280008684.01.T01 MTR_1g097560 30.380 395 210 17 8 383 25 373 3.81e-37 138
MsG0280008684.01.T01 MTR_1g054725 29.398 415 221 19 1 383 1 375 7.81e-37 137
MsG0280008684.01.T01 MTR_1g097330 29.545 396 218 14 5 376 4 362 2.47e-35 134
MsG0280008684.01.T01 MTR_0267s0050 30.500 400 229 16 17 385 4 385 4.33e-35 133
MsG0280008684.01.T01 MTR_3g013950 30.100 402 230 16 17 385 4 387 1.12e-34 132
MsG0280008684.01.T01 MTR_7g061100 35.249 261 121 11 15 271 6 222 1.41e-34 130
MsG0280008684.01.T01 MTR_2g027820 44.633 177 81 6 222 382 124 299 2.09e-34 129
MsG0280008684.01.T01 MTR_7g091610 41.111 180 86 6 222 383 69 246 2.49e-34 127
MsG0280008684.01.T01 MTR_7g070440 30.435 391 213 18 22 382 9 370 2.64e-34 130
MsG0280008684.01.T01 MTR_3g006670 31.605 405 196 18 20 385 49 411 1.16e-33 129
MsG0280008684.01.T01 MTR_2g029990 29.668 391 211 18 21 385 52 404 1.17e-33 129
MsG0280008684.01.T01 MTR_6g065980 29.925 401 202 18 14 385 10 360 1.75e-33 128
MsG0280008684.01.T01 MTR_4g031770 29.268 410 199 17 20 383 4 368 2.15e-33 128
MsG0280008684.01.T01 MTR_4g128320 35.433 254 113 10 133 366 39 261 2.30e-33 125
MsG0280008684.01.T01 MTR_1g097490 29.058 382 213 14 20 383 49 390 3.59e-33 128
MsG0280008684.01.T01 MTR_3g011020 30.000 410 209 17 4 385 13 372 4.96e-33 127
MsG0280008684.01.T01 MTR_3g014540 29.315 365 192 15 20 356 29 355 6.81e-33 127
MsG0280008684.01.T01 MTR_3g009240 30.072 419 208 20 1 385 17 384 7.53e-33 127
MsG0280008684.01.T01 MTR_2g021155 31.198 359 186 15 23 357 39 360 8.52e-33 130
MsG0280008684.01.T01 MTR_2g021155 28.689 244 124 11 167 385 739 957 2.07e-18 87.8
MsG0280008684.01.T01 MTR_5g011200 26.859 417 218 16 6 382 4 373 8.79e-33 126
MsG0280008684.01.T01 MTR_5g046300 31.061 396 192 19 20 383 4 350 9.62e-33 126
MsG0280008684.01.T01 MTR_5g046290 31.061 396 192 19 20 383 4 350 9.62e-33 126
MsG0280008684.01.T01 MTR_5g069950 36.453 203 98 6 126 326 24 197 1.59e-32 122
MsG0280008684.01.T01 MTR_3g036290 30.570 386 209 16 15 385 17 358 1.61e-32 125
MsG0280008684.01.T01 MTR_2g078900 31.515 330 164 14 20 330 33 319 1.68e-32 125
MsG0280008684.01.T01 MTR_1g094210 28.756 386 217 14 16 383 53 398 1.96e-32 126
MsG0280008684.01.T01 MTR_6g081280 33.468 248 123 11 159 383 12 240 2.96e-32 122
MsG0280008684.01.T01 MTR_3g013740 30.184 381 189 18 1 342 26 368 4.71e-32 125
MsG0280008684.01.T01 MTR_4g061340 29.367 395 207 16 20 385 26 377 5.18e-32 124
MsG0280008684.01.T01 MTR_2g046920 29.923 391 205 17 20 383 24 372 1.25e-31 123
MsG0280008684.01.T01 MTR_3g014570 29.412 408 200 18 13 383 22 378 1.35e-31 123
MsG0280008684.01.T01 MTR_1g094210 26.835 395 208 12 16 376 53 400 1.41e-31 124
MsG0280008684.01.T01 MTR_2g017720 37.615 218 109 9 178 379 90 296 1.51e-31 124
MsG0280008684.01.T01 MTR_3g007270 29.282 362 188 13 15 342 42 369 1.66e-31 124
MsG0280008684.01.T01 MTR_2g021150 27.569 399 210 15 20 383 14 368 2.07e-31 122
MsG0280008684.01.T01 MTR_7g061940 39.545 220 95 9 155 355 67 267 3.16e-31 120
MsG0280008684.01.T01 MTR_7g058630 42.442 172 78 4 228 384 15 180 3.33e-31 117
MsG0280008684.01.T01 MTR_2g047832 28.846 364 223 11 20 361 29 378 6.09e-31 122
MsG0280008684.01.T01 MTR_0044s0300 28.753 393 214 16 20 385 38 391 8.39e-31 121
MsG0280008684.01.T01 MTR_1g050542 28.993 407 222 17 2 383 40 404 1.06e-30 121
MsG0280008684.01.T01 MTR_1g058190 26.633 398 215 14 10 382 24 369 1.17e-30 120
MsG0280008684.01.T01 MTR_3g011100 29.843 382 184 16 20 358 235 575 3.66e-30 122
MsG0280008684.01.T01 MTR_4g024870 36.691 278 123 14 21 270 45 297 4.87e-30 120
MsG0280008684.01.T01 MTR_3g010870 29.064 406 219 18 5 383 21 384 6.53e-30 119
MsG0280008684.01.T01 MTR_7g030040 29.397 398 165 16 3 384 40 337 6.56e-30 118
MsG0280008684.01.T01 MTR_3g013770 31.412 347 171 16 3 322 15 321 6.89e-30 119
MsG0280008684.01.T01 MTR_6g027910 27.363 402 233 13 15 385 3 376 8.04e-30 118
MsG0280008684.01.T01 MTR_7g050490 39.899 198 92 8 17 201 5 188 8.41e-30 114
MsG0280008684.01.T01 MTR_3g006570 28.777 417 218 16 3 385 7 378 1.53e-29 117
MsG0280008684.01.T01 MTR_0760s0010 29.306 389 198 17 25 385 52 391 1.58e-29 118
MsG0280008684.01.T01 MTR_3g083640 26.551 403 230 13 8 385 43 404 2.25e-29 117
MsG0280008684.01.T01 MTR_3g007360 30.548 347 178 16 23 342 55 365 3.78e-29 117
MsG0280008684.01.T01 MTR_7g078880 26.633 398 166 12 17 380 6 311 5.09e-29 116
MsG0280008684.01.T01 MTR_8g101580 29.771 393 204 21 20 383 45 394 5.46e-29 116
MsG0280008684.01.T01 MTR_6g053260 31.054 351 190 14 20 353 337 652 6.72e-29 119
MsG0280008684.01.T01 MTR_3g010920 29.227 414 213 18 1 383 17 381 6.90e-29 116
MsG0280008684.01.T01 MTR_7g007300 28.535 396 212 16 13 383 96 445 9.08e-29 117
MsG0280008684.01.T01 MTR_3g010520 29.471 397 210 15 6 383 14 359 1.35e-28 115
MsG0280008684.01.T01 MTR_3g011060 29.484 407 200 17 20 385 28 388 1.52e-28 115
MsG0280008684.01.T01 MTR_2g046800 28.266 421 209 17 17 383 11 392 2.16e-28 115
MsG0280008684.01.T01 MTR_2g046900 28.283 396 213 17 20 383 28 384 2.48e-28 114
MsG0280008684.01.T01 MTR_2g021252 28.354 395 193 18 23 385 50 386 2.88e-28 114
MsG0280008684.01.T01 MTR_2g078850 27.968 379 210 18 23 381 33 368 2.88e-28 114
MsG0280008684.01.T01 MTR_4g108820 29.969 327 157 16 3 322 25 286 5.22e-28 112
MsG0280008684.01.T01 MTR_3g007410 30.259 347 179 16 23 342 55 365 5.90e-28 114
MsG0280008684.01.T01 MTR_8g062660 31.751 337 145 17 19 318 21 309 6.17e-28 115
MsG0280008684.01.T01 MTR_4g020000 36.052 233 111 10 156 362 102 322 9.14e-28 112
MsG0280008684.01.T01 MTR_2g046830 27.747 364 207 11 20 361 25 354 1.92e-27 112
MsG0280008684.01.T01 MTR_7g407070 28.205 390 198 17 5 355 20 366 4.51e-27 111
MsG0280008684.01.T01 MTR_3g036335 29.798 396 204 19 20 383 41 394 5.24e-27 111
MsG0280008684.01.T01 MTR_6g042600 40.940 149 70 4 249 379 172 320 5.37e-27 111
MsG0280008684.01.T01 MTR_6g042600 36.842 171 80 6 11 181 28 170 7.79e-20 90.9
MsG0280008684.01.T01 MTR_2g010935 29.297 256 127 8 151 383 25 249 8.96e-27 107
MsG0280008684.01.T01 MTR_3g009310 28.261 414 212 20 5 385 31 392 1.29e-26 110
MsG0280008684.01.T01 MTR_7g070937 42.105 133 66 2 165 288 10 140 1.35e-26 104
MsG0280008684.01.T01 MTR_7g013590 31.701 388 196 20 23 382 39 385 1.47e-26 110
MsG0280008684.01.T01 MTR_3g010390 28.471 425 217 20 5 385 18 399 2.92e-26 108
MsG0280008684.01.T01 MTR_6g053240 28.375 363 191 14 20 354 28 349 3.48e-26 108
MsG0280008684.01.T01 MTR_3g024110 28.856 402 214 18 10 385 94 449 3.70e-26 109
MsG0280008684.01.T01 MTR_6g004660 29.777 403 208 22 19 383 15 380 4.32e-26 108
MsG0280008684.01.T01 MTR_3g006500 28.250 400 204 18 20 383 17 369 4.77e-26 108
MsG0280008684.01.T01 MTR_3g024150 28.608 388 210 14 23 383 38 385 5.84e-26 108
MsG0280008684.01.T01 MTR_5g046260 28.497 386 162 19 20 383 4 297 5.95e-26 106
MsG0280008684.01.T01 MTR_3g030330 31.498 327 166 15 11 322 11 294 8.11e-26 107
MsG0280008684.01.T01 MTR_5g057710 26.972 393 218 15 20 385 46 396 8.22e-26 107
MsG0280008684.01.T01 MTR_4g107780 28.173 323 169 14 20 322 36 315 8.61e-26 108
MsG0280008684.01.T01 MTR_2g055970 29.630 324 171 16 17 321 208 493 9.02e-26 109
MsG0280008684.01.T01 MTR_4g107820 28.173 323 169 14 20 322 36 315 9.88e-26 107
MsG0280008684.01.T01 MTR_4g107780 28.173 323 169 14 20 322 36 315 9.88e-26 107
MsG0280008684.01.T01 MTR_4g107820 28.173 323 169 14 20 322 36 315 1.07e-25 107
MsG0280008684.01.T01 MTR_3g010590 29.146 398 207 16 15 383 34 385 1.29e-25 107
MsG0280008684.01.T01 MTR_1g056710 28.501 407 218 17 9 383 23 388 1.54e-25 107
MsG0280008684.01.T01 MTR_8g467140 29.968 317 177 14 18 321 30 314 2.45e-25 105
MsG0280008684.01.T01 MTR_1g115160 28.218 404 195 17 18 383 20 366 2.49e-25 106
MsG0280008684.01.T01 MTR_8g030630 29.661 236 134 7 172 384 34 260 3.42e-25 106
MsG0280008684.01.T01 MTR_8g030630 33.684 190 81 5 187 361 281 440 7.11e-24 102
MsG0280008684.01.T01 MTR_7g066040 32.961 179 99 6 109 271 23 196 4.64e-25 102
MsG0280008684.01.T01 MTR_4g006840 34.496 258 118 13 23 269 2 219 7.59e-25 101
MsG0280008684.01.T01 MTR_3g010430 28.641 412 210 16 11 385 30 394 1.18e-24 104
MsG0280008684.01.T01 MTR_3g030250 27.083 384 219 14 20 383 37 379 1.22e-24 104
MsG0280008684.01.T01 MTR_3g010970 29.231 390 198 17 23 383 51 391 1.56e-24 103
MsG0280008684.01.T01 MTR_3g007430 29.155 343 190 15 23 348 46 352 1.75e-24 103
MsG0280008684.01.T01 MTR_0128s0110 32.075 212 119 6 186 382 1 202 2.43e-24 99.8
MsG0280008684.01.T01 MTR_3g023930 28.571 399 219 17 1 383 19 367 2.61e-24 103
MsG0280008684.01.T01 MTR_1g112930 27.731 357 194 15 8 342 15 329 3.01e-24 103
MsG0280008684.01.T01 MTR_3g436150 27.513 378 191 18 14 353 26 358 3.04e-24 103
MsG0280008684.01.T01 MTR_3g036430 27.820 399 210 15 4 385 7 344 4.33e-24 102
MsG0280008684.01.T01 MTR_8g030660 32.567 261 113 12 17 231 24 267 4.77e-24 100
MsG0280008684.01.T01 MTR_3g030350 28.022 364 203 16 20 366 35 356 5.27e-24 102
MsG0280008684.01.T01 MTR_3g006530 27.431 401 214 17 20 385 40 398 5.38e-24 102
MsG0280008684.01.T01 MTR_6g007135 29.602 402 209 20 19 383 25 389 5.64e-24 102
MsG0280008684.01.T01 MTR_3g010620 29.619 341 163 17 6 321 14 302 8.68e-24 102
MsG0280008684.01.T01 MTR_1g054575 29.712 313 171 13 19 319 51 326 1.19e-23 103
MsG0280008684.01.T01 MTR_6g013270 27.708 397 219 15 2 377 14 363 1.30e-23 101
MsG0280008684.01.T01 MTR_7g067680 26.847 406 203 14 5 382 37 376 1.93e-23 101
MsG0280008684.01.T01 MTR_3g006640 25.237 317 157 12 110 385 17 294 2.13e-23 99.4
MsG0280008684.01.T01 MTR_3g030310 27.451 408 218 17 20 385 21 392 4.51e-23 100
MsG0280008684.01.T01 MTR_4g055060 27.914 326 184 13 19 325 29 322 4.95e-23 99.8
MsG0280008684.01.T01 MTR_7g070900 34.536 194 75 7 165 339 235 395 5.49e-23 100
MsG0280008684.01.T01 MTR_1g055055 26.374 364 202 14 15 360 21 336 6.10e-23 99.0
MsG0280008684.01.T01 MTR_5g057790 28.448 348 176 18 20 338 46 349 6.65e-23 99.8
MsG0280008684.01.T01 MTR_5g009060 26.265 415 218 17 20 385 25 400 9.52e-23 99.4
MsG0280008684.01.T01 MTR_3g024040 26.098 387 210 18 26 385 37 374 1.70e-22 98.2
MsG0280008684.01.T01 MTR_3g030240 27.692 390 214 15 15 383 35 377 1.74e-22 98.2
MsG0280008684.01.T01 MTR_1g115185 26.582 395 219 16 23 383 42 399 1.85e-22 98.2
MsG0280008684.01.T01 MTR_5g057690 24.685 397 211 17 20 385 46 385 3.83e-22 97.4
MsG0280008684.01.T01 MTR_3g007300 29.477 363 165 21 2 342 32 325 1.35e-21 95.5
MsG0280008684.01.T01 MTR_3g055000 37.302 126 77 2 260 383 1 126 2.07e-21 89.4
MsG0280008684.01.T01 MTR_3g009260 28.362 409 225 20 1 385 22 386 2.36e-21 95.1
MsG0280008684.01.T01 MTR_5g022420 26.776 366 186 18 20 354 27 341 3.63e-21 94.4
MsG0280008684.01.T01 MTR_2g078870 27.507 349 179 15 69 385 3 309 5.69e-21 92.8
MsG0280008684.01.T01 MTR_1004s0010 26.705 352 179 16 59 385 64 361 6.13e-21 93.6
MsG0280008684.01.T01 MTR_2g043420 44.030 134 57 6 4 121 3 134 6.36e-21 89.0
MsG0280008684.01.T01 MTR_5g046280 30.450 289 144 14 114 383 3 253 9.28e-21 90.9
MsG0280008684.01.T01 MTR_3g023940 27.621 391 215 19 20 383 34 383 1.10e-20 93.2
MsG0280008684.01.T01 MTR_8g069515 38.037 163 77 7 5 149 1 157 1.25e-20 89.0
MsG0280008684.01.T01 MTR_4g023080 28.721 383 213 17 18 383 7 346 2.22e-20 91.7
MsG0280008684.01.T01 MTR_5g007610 26.044 407 215 19 20 385 41 402 2.59e-20 92.0
MsG0280008684.01.T01 MTR_7g056793 34.225 187 108 6 209 382 46 230 2.89e-20 89.0
MsG0280008684.01.T01 MTR_2g021210 25.945 397 217 14 16 385 80 426 3.79e-20 92.0
MsG0280008684.01.T01 MTR_1g055070 25.768 423 205 18 4 383 36 392 5.63e-20 90.9
MsG0280008684.01.T01 MTR_3g096280 25.193 389 191 14 34 385 19 344 1.40e-19 89.4
MsG0280008684.01.T01 MTR_4g053510 44.643 112 50 6 17 119 19 127 1.47e-19 84.3
MsG0280008684.01.T01 MTR_3g010870 28.906 256 137 11 5 243 21 248 2.82e-19 88.2
MsG0280008684.01.T01 MTR_7g055850 33.663 202 85 8 19 183 12 201 5.49e-19 86.7
MsG0280008684.01.T01 MTR_5g057020 26.562 320 176 14 20 327 46 318 1.45e-18 86.3
MsG0280008684.01.T01 MTR_1g113900 30.870 230 121 10 167 383 41 245 1.71e-18 84.3
MsG0280008684.01.T01 MTR_7g066830 33.333 180 92 9 40 205 15 180 1.85e-18 82.8
MsG0280008684.01.T01 MTR_1g114700 27.475 404 220 20 14 383 23 387 1.93e-18 86.7
MsG0280008684.01.T01 MTR_8g073550 29.245 212 123 6 14 210 24 223 2.02e-18 84.0
MsG0280008684.01.T01 MTR_2g435950 25.625 320 166 13 89 383 24 296 4.31e-18 84.3
MsG0280008684.01.T01 MTR_1g100763 27.954 347 168 16 34 358 12 298 6.13e-18 84.0
MsG0280008684.01.T01 MTR_3g034180 24.814 403 240 14 10 383 113 481 7.90e-18 85.5
MsG0280008684.01.T01 MTR_3g103020 27.411 394 217 18 18 383 18 370 1.45e-17 84.0
MsG0280008684.01.T01 MTR_7g089830 45.872 109 40 3 223 331 7 96 1.91e-17 79.0
MsG0280008684.01.T01 MTR_3g058440 27.857 280 138 9 20 273 35 276 1.97e-17 82.4
MsG0280008684.01.T01 MTR_3g058470 26.847 406 215 20 5 385 25 373 3.03e-17 82.8
MsG0280008684.01.T01 MTR_2g079810 27.239 268 155 10 19 272 5 246 3.03e-17 82.0
MsG0280008684.01.T01 MTR_6g021880 28.173 394 193 20 34 383 34 381 3.53e-17 82.8
MsG0280008684.01.T01 MTR_7g078050 37.931 145 72 7 16 152 2 136 3.70e-17 80.9
MsG0280008684.01.T01 MTR_7g060930 50.000 64 32 0 249 312 15 78 5.55e-17 75.5
MsG0280008684.01.T01 MTR_3g058480 27.891 294 149 11 5 273 27 282 7.15e-17 81.3
MsG0280008684.01.T01 MTR_4g024910 40.506 158 65 9 38 183 1 141 9.93e-17 80.9
MsG0280008684.01.T01 MTR_7g445580 41.509 106 48 3 269 362 42 145 1.30e-16 76.6
MsG0280008684.01.T01 MTR_6g014720 26.593 361 207 15 16 366 22 334 1.51e-16 80.9
MsG0280008684.01.T01 MTR_6g048140 26.699 412 220 20 15 385 34 404 1.66e-16 80.9
MsG0280008684.01.T01 MTR_4g109270 25.789 380 235 15 20 383 8 356 2.16e-16 80.1
MsG0280008684.01.T01 MTR_2g046860 26.007 273 147 9 111 361 7 246 3.13e-16 79.3
MsG0280008684.01.T01 MTR_4g021785 27.110 391 210 20 18 383 7 347 3.98e-16 79.3
MsG0280008684.01.T01 MTR_3g024130 26.316 304 150 14 111 385 58 316 4.04e-16 79.0
MsG0280008684.01.T01 MTR_6g007150 28.859 298 158 13 111 383 69 337 4.28e-16 79.0
MsG0280008684.01.T01 MTR_4g023090 25.364 343 201 13 20 341 16 324 4.42e-16 79.3
MsG0280008684.01.T01 MTR_4g089125 49.020 102 38 6 16 117 8 95 9.39e-16 72.8
MsG0280008684.01.T01 MTR_3g034130 23.810 336 190 11 16 322 5 303 1.11e-15 78.2
MsG0280008684.01.T01 MTR_6g027890 26.331 357 197 17 61 385 4 326 1.30e-15 77.4
MsG0280008684.01.T01 MTR_4g117850 24.611 386 233 17 20 383 23 372 1.35e-15 77.8
MsG0280008684.01.T01 MTR_4g023130 27.346 373 190 16 18 383 7 305 1.40e-15 77.4
MsG0280008684.01.T01 MTR_0064s0060 37.500 120 60 3 10 118 7 122 1.47e-15 73.6
MsG0280008684.01.T01 MTR_4g063955 34.375 192 106 8 4 183 9 192 1.84e-15 76.3
MsG0280008684.01.T01 MTR_4g023190 25.450 389 232 18 13 383 3 351 1.92e-15 77.4
MsG0280008684.01.T01 MTR_8g099460 23.511 319 202 8 20 321 5 298 3.13e-15 77.0
MsG0280008684.01.T01 MTR_3g011650 30.222 225 125 9 23 237 82 284 4.78e-15 75.1
MsG0280008684.01.T01 MTR_4g132560 31.102 254 109 13 165 383 36 258 5.10e-15 74.7
MsG0280008684.01.T01 MTR_3g009300 26.176 340 169 19 23 342 37 314 5.98e-15 75.9
MsG0280008684.01.T01 MTR_4g133170 24.800 375 214 17 20 366 4 338 6.28e-15 76.3
MsG0280008684.01.T01 MTR_8g433040 25.126 398 225 17 10 383 8 356 6.78e-15 75.9
MsG0280008684.01.T01 MTR_8g032380 25.126 398 225 17 10 383 8 356 6.78e-15 75.9
MsG0280008684.01.T01 MTR_8g032390 25.253 396 222 16 7 383 27 367 1.63e-14 74.7
MsG0280008684.01.T01 MTR_1g068835 24.185 368 215 14 20 360 4 334 1.67e-14 74.7
MsG0280008684.01.T01 MTR_7g062070 35.294 119 58 4 263 363 75 192 1.79e-14 72.0
MsG0280008684.01.T01 MTR_2g425980 25.135 370 229 12 20 360 5 355 4.15e-14 73.6
MsG0280008684.01.T01 MTR_5g057040 31.980 197 110 10 20 203 46 231 5.71e-14 74.3
MsG0280008684.01.T01 MTR_6g460450 40.602 133 55 7 5 122 16 139 6.30e-14 68.9
MsG0280008684.01.T01 MTR_4g030880 31.282 195 82 9 187 370 49 202 6.51e-14 73.6
MsG0280008684.01.T01 MTR_3g083010 24.880 418 230 19 20 383 6 393 7.07e-14 73.2
MsG0280008684.01.T01 MTR_4g023200 25.068 367 220 18 34 383 24 352 7.38e-14 72.4
MsG0280008684.01.T01 MTR_4g109280 25.255 392 217 17 20 383 8 351 9.01e-14 72.4
MsG0280008684.01.T01 MTR_4g023150 24.433 397 227 19 13 383 3 352 9.64e-14 72.4
MsG0280008684.01.T01 MTR_3g009250 30.804 224 124 11 23 237 44 245 1.32e-13 70.5
MsG0280008684.01.T01 MTR_5g070080 24.691 405 231 16 18 383 8 377 2.11e-13 71.2
MsG0280008684.01.T01 MTR_2g426020 23.677 359 220 11 20 351 6 337 3.29e-13 70.9
MsG0280008684.01.T01 MTR_3g083660 26.778 239 124 8 162 381 72 278 4.02e-13 69.7
MsG0280008684.01.T01 MTR_5g057643 29.612 206 103 11 20 203 46 231 6.29e-13 68.9
MsG0280008684.01.T01 MTR_4g117770 26.425 386 225 17 20 383 11 359 6.46e-13 69.7
MsG0280008684.01.T01 MTR_4g117810 26.425 386 225 17 20 383 11 359 6.46e-13 69.7
MsG0280008684.01.T01 MTR_3g096250 25.065 387 196 15 12 385 42 347 1.08e-12 68.9
MsG0280008684.01.T01 MTR_1g046600 33.766 154 84 5 45 182 72 223 1.31e-12 68.2
MsG0280008684.01.T01 MTR_4g023070 24.566 403 222 17 20 383 3 362 1.53e-12 68.6
MsG0280008684.01.T01 MTR_4g117780 26.234 385 227 17 20 383 11 359 1.56e-12 68.6
MsG0280008684.01.T01 MTR_2g426090 23.316 386 241 14 19 373 5 366 1.67e-12 68.9
MsG0280008684.01.T01 MTR_5g070130 22.656 384 245 13 23 383 14 368 3.22e-12 67.8
MsG0280008684.01.T01 MTR_7g077930 46.154 65 33 2 18 82 17 79 3.77e-12 62.8
MsG0280008684.01.T01 MTR_1g055065 26.316 304 157 14 112 383 19 287 6.49e-12 66.2
MsG0280008684.01.T01 MTR_4g053500 49.153 59 25 2 4 58 2 59 9.25e-12 60.5
MsG0280008684.01.T01 MTR_4g094365 23.575 386 240 15 18 383 6 356 1.16e-11 65.9
MsG0280008684.01.T01 MTR_2g028130 23.117 385 223 17 20 365 5 355 1.39e-11 65.9
MsG0280008684.01.T01 MTR_2g048580 23.387 372 238 11 17 383 5 334 2.88e-11 64.7
MsG0280008684.01.T01 MTR_4g116330 25.381 394 240 15 10 383 13 372 3.79e-11 64.3
MsG0280008684.01.T01 MTR_3g034160 22.278 395 248 13 16 383 5 367 4.33e-11 64.3
MsG0280008684.01.T01 MTR_2g010930 53.623 69 30 2 1 69 151 217 6.78e-11 62.0
MsG0280008684.01.T01 MTR_2g025420 23.457 405 253 16 19 383 5 392 7.01e-11 63.9
MsG0280008684.01.T01 MTR_8g054320 25.694 288 156 14 115 385 56 302 7.73e-11 63.2
MsG0280008684.01.T01 MTR_8g013010 27.059 255 125 11 18 243 52 274 8.33e-11 63.2
MsG0280008684.01.T01 MTR_6g004210 26.385 379 201 20 34 365 39 386 9.39e-11 63.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0280008684.01.T01 AT3G23880 24.672 381 236 12 20 383 14 360 1.69e-16 80.5
MsG0280008684.01.T01 AT1G33530 24.118 340 210 10 6 337 83 382 2.45e-14 74.7

Find 67 sgRNAs with CRISPR-Local

Find 85 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCACTCTGGGTGATAAATTT+TGG 0.138015 2:+36253420 MsG0280008684.01.T01:CDS
GATCTACGAAATTAAATTTA+AGG 0.169523 2:-36253811 None:intergenic
GAAAACATTGTGAGGTGTTT+AGG 0.199653 2:-36253056 None:intergenic
GCATCACCATTCTCAAATAA+TGG 0.229383 2:-36253845 None:intergenic
AAAACATTGTGAGGTGTTTA+GGG 0.278459 2:-36253055 None:intergenic
GAAGACTGTAACCGAGTTCT+TGG 0.288626 2:+36253164 MsG0280008684.01.T01:CDS
TGTGATTATCTCTCTTGATT+TGG 0.302225 2:+36253613 MsG0280008684.01.T01:CDS
GCCAATTGTTTCTGTGTTGA+TGG 0.304155 2:+36253697 MsG0280008684.01.T01:CDS
TAATACAACCGGAAAATATA+AGG 0.334132 2:+36253364 MsG0280008684.01.T01:CDS
GAAATGGTTATAAACTGATT+AGG 0.366161 2:-36253104 None:intergenic
ACAGAAACAATTGGCATAAC+AGG 0.366235 2:-36253689 None:intergenic
CATCACCATTCTCAAATAAT+GGG 0.383945 2:-36253844 None:intergenic
AACACATAGTTCGCTATAAT+AGG 0.390226 2:+36253891 MsG0280008684.01.T01:CDS
TACGAGGCGAATTAGATAGA+AGG 0.400751 2:-36252857 None:intergenic
TCAAATGTGTTTGCAAATCA+TGG 0.403816 2:+36252967 MsG0280008684.01.T01:CDS
AAAATCAGTGATGACATTCA+TGG 0.423283 2:+36253938 MsG0280008684.01.T01:CDS
TTGATCCCATTATTTGAGAA+TGG 0.424189 2:+36253839 MsG0280008684.01.T01:CDS
CGAGTTCTTGGTTCCTGCAA+TGG 0.426564 2:+36253176 MsG0280008684.01.T01:CDS
TGAGGTGAGAACTTTCACTC+TGG 0.427353 2:+36253406 MsG0280008684.01.T01:CDS
AATTTAGAGTTGAAGAGTCT+TGG 0.428513 2:+36253780 MsG0280008684.01.T01:CDS
TTTGGTTACGATAATACAAC+CGG 0.434379 2:+36253353 MsG0280008684.01.T01:CDS
GAGTACGAAATCTTCGGAAA+TGG 0.445620 2:-36253120 None:intergenic
ATTTGTGTAATAGTATCAAT+TGG 0.450041 2:+36253525 MsG0280008684.01.T01:CDS
CATGCATATCAATCCATTGC+AGG 0.456442 2:-36253189 None:intergenic
ATAACGTTGGTTATAATGAA+TGG 0.457578 2:+36253561 MsG0280008684.01.T01:CDS
CATTCATGGGCTTATTGCAA+TGG 0.470391 2:+36253952 MsG0280008684.01.T01:CDS
TCCATCAACACAGAAACAAT+TGG 0.473682 2:-36253698 None:intergenic
GGTGGCATTCAGTTCGGTTG+AGG 0.477498 2:+36253388 MsG0280008684.01.T01:CDS
ACTTCGGCGATGAGATCGTC+GGG 0.479523 2:-36252909 None:intergenic
CTCGTTCGAATAAGAATGGA+TGG 0.482659 2:+36253483 MsG0280008684.01.T01:CDS
TAAGGTGGTGGCATTCAGTT+CGG 0.484226 2:+36253382 MsG0280008684.01.T01:CDS
GTGAGGTGTTTAGGGTTTCG+TGG 0.494463 2:-36253047 None:intergenic
AAAATCTGAAATAGTCATGC+TGG 0.495110 2:-36253328 None:intergenic
GTGACTGAGTACGAAATCTT+CGG 0.500727 2:-36253126 None:intergenic
GAGGTGAGAACTTTCACTCT+GGG 0.514842 2:+36253407 MsG0280008684.01.T01:CDS
TGTACTCGTTCGAATAAGAA+TGG 0.517904 2:+36253479 MsG0280008684.01.T01:CDS
TTCGAACGAGTACATCGAAA+AGG 0.520370 2:-36253470 None:intergenic
TATAACAAAATCATCTCCGT+TGG 0.526412 2:-36253744 None:intergenic
TCGACACTGACCTCGTGGCT+AGG 0.532093 2:-36253271 None:intergenic
AAATCAGTGATGACATTCAT+GGG 0.545356 2:+36253939 MsG0280008684.01.T01:CDS
GTACTTCATCGAATCCCTGA+GGG 0.552504 2:-36253664 None:intergenic
TTTGACGAAGGTGGGATCAG+AGG 0.558711 2:-36253003 None:intergenic
CGTTGGTTATAATGAATGGA+AGG 0.560356 2:+36253565 MsG0280008684.01.T01:CDS
AACCGGAAAATATAAGGTGG+TGG 0.566863 2:+36253370 MsG0280008684.01.T01:CDS
TATAACCAACGTTATTGCGA+AGG 0.567255 2:-36253553 None:intergenic
ATAACCAACGTTATTGCGAA+GGG 0.595026 2:-36253552 None:intergenic
AAGAATGGATGGGATCAGAA+TGG 0.598998 2:+36253494 MsG0280008684.01.T01:CDS
GTCATGCAATGATAGAACTT+CGG 0.608196 2:-36252925 None:intergenic
AACTTCGGCGATGAGATCGT+CGG 0.608756 2:-36252910 None:intergenic
GGTTATAAACTGATTAGGCA+AGG 0.608997 2:-36253099 None:intergenic
AGGTCAGTGTCGAAAATAGT+CGG 0.618233 2:+36253281 MsG0280008684.01.T01:CDS
TTCGTGGAGATGATTTGATG+AGG 0.627054 2:-36253031 None:intergenic
CATTGCAGGAACCAAGAACT+CGG 0.627968 2:-36253175 None:intergenic
TTTGCCCTTCGCAATAACGT+TGG 0.631008 2:+36253548 MsG0280008684.01.T01:CDS
GTACATCGAAAAGGAAGCAG+AGG 0.635610 2:-36253461 None:intergenic
TCGTTCGAATAAGAATGGAT+GGG 0.651195 2:+36253484 MsG0280008684.01.T01:CDS
TACATCGAAAAGGAAGCAGA+GGG 0.653532 2:-36253460 None:intergenic
TCTTGCAAGAAAACATTGTG+AGG 0.665503 2:-36253064 None:intergenic
TACAACCGGAAAATATAAGG+TGG 0.669363 2:+36253367 MsG0280008684.01.T01:CDS
GAAACAATTGGCATAACAGG+TGG 0.677781 2:-36253686 None:intergenic
AATGGATGGGATCAGAATGG+TGG 0.678930 2:+36253497 MsG0280008684.01.T01:CDS
ACTTCATCGAATCCCTGAGG+GGG 0.690973 2:-36253662 None:intergenic
CGGCGATGAGATCGTCGGGG+AGG 0.697868 2:-36252905 None:intergenic
TACTTCATCGAATCCCTGAG+GGG 0.709395 2:-36253663 None:intergenic
GGTACTTCATCGAATCCCTG+AGG 0.722118 2:-36253665 None:intergenic
TCGGGGAGGATCAATGACGA+CGG 0.738378 2:-36252891 None:intergenic
CTTCGGCGATGAGATCGTCG+GGG 0.753689 2:-36252908 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATTTGTGTAATAGTATCAAT+TGG + Chr2:36253525-36253544 MsG0280008684.01.T01:CDS 20.0%
!! GATCTACGAAATTAAATTTA+AGG - Chr2:36253814-36253833 None:intergenic 20.0%
! GAAATGGTTATAAACTGATT+AGG - Chr2:36253107-36253126 None:intergenic 25.0%
! TAATACAACCGGAAAATATA+AGG + Chr2:36253364-36253383 MsG0280008684.01.T01:CDS 25.0%
!! ATAACGTTGGTTATAATGAA+TGG + Chr2:36253561-36253580 MsG0280008684.01.T01:CDS 25.0%
!! GACTATTTCAGATTTTCATT+TGG + Chr2:36253335-36253354 MsG0280008684.01.T01:CDS 25.0%
!!! AGTTTTGAACATTTTGGTAT+TGG - Chr2:36253232-36253251 None:intergenic 25.0%
!!! CTGTGTTAGTTATGTTTTTA+TGG + Chr2:36253304-36253323 MsG0280008684.01.T01:CDS 25.0%
!!! TGTTTTTGTCATTATTCCAA+CGG + Chr2:36253728-36253747 MsG0280008684.01.T01:CDS 25.0%
AAAATCAGTGATGACATTCA+TGG + Chr2:36253938-36253957 MsG0280008684.01.T01:CDS 30.0%
AAATCAGTGATGACATTCAT+GGG + Chr2:36253939-36253958 MsG0280008684.01.T01:CDS 30.0%
AACACATAGTTCGCTATAAT+AGG + Chr2:36253891-36253910 MsG0280008684.01.T01:CDS 30.0%
CATCACCATTCTCAAATAAT+GGG - Chr2:36253847-36253866 None:intergenic 30.0%
TATAACAAAATCATCTCCGT+TGG - Chr2:36253747-36253766 None:intergenic 30.0%
TCAAATGTGTTTGCAAATCA+TGG + Chr2:36252967-36252986 MsG0280008684.01.T01:CDS 30.0%
TGTGATTATCTCTCTTGATT+TGG + Chr2:36253613-36253632 MsG0280008684.01.T01:CDS 30.0%
TTGATCCCATTATTTGAGAA+TGG + Chr2:36253839-36253858 MsG0280008684.01.T01:CDS 30.0%
TTTGGTTACGATAATACAAC+CGG + Chr2:36253353-36253372 MsG0280008684.01.T01:CDS 30.0%
! AAAACATTGTGAGGTGTTTA+GGG - Chr2:36253058-36253077 None:intergenic 30.0%
! AAAATCTGAAATAGTCATGC+TGG - Chr2:36253331-36253350 None:intergenic 30.0%
! AATTTAGAGTTGAAGAGTCT+TGG + Chr2:36253780-36253799 MsG0280008684.01.T01:CDS 30.0%
!! ACGGAGATGATTTTGTTATA+TGG + Chr2:36253747-36253766 MsG0280008684.01.T01:CDS 30.0%
!!! GATGGAAGTTTTGAACATTT+TGG - Chr2:36253238-36253257 None:intergenic 30.0%
ACAGAAACAATTGGCATAAC+AGG - Chr2:36253692-36253711 None:intergenic 35.0%
ATAACCAACGTTATTGCGAA+GGG - Chr2:36253555-36253574 None:intergenic 35.0%
GCATCACCATTCTCAAATAA+TGG - Chr2:36253848-36253867 None:intergenic 35.0%
GGTTATAAACTGATTAGGCA+AGG - Chr2:36253102-36253121 None:intergenic 35.0%
GTCATGCAATGATAGAACTT+CGG - Chr2:36252928-36252947 None:intergenic 35.0%
TACAACCGGAAAATATAAGG+TGG + Chr2:36253367-36253386 MsG0280008684.01.T01:CDS 35.0%
TATAACCAACGTTATTGCGA+AGG - Chr2:36253556-36253575 None:intergenic 35.0%
TCCATCAACACAGAAACAAT+TGG - Chr2:36253701-36253720 None:intergenic 35.0%
TCGTTCGAATAAGAATGGAT+GGG + Chr2:36253484-36253503 MsG0280008684.01.T01:CDS 35.0%
TCTTGCAAGAAAACATTGTG+AGG - Chr2:36253067-36253086 None:intergenic 35.0%
TGTACTCGTTCGAATAAGAA+TGG + Chr2:36253479-36253498 MsG0280008684.01.T01:CDS 35.0%
! AAAACTTCCATCTCCGTTTT+TGG + Chr2:36253246-36253265 MsG0280008684.01.T01:CDS 35.0%
! CGTTGGTTATAATGAATGGA+AGG + Chr2:36253565-36253584 MsG0280008684.01.T01:CDS 35.0%
! GAAAACATTGTGAGGTGTTT+AGG - Chr2:36253059-36253078 None:intergenic 35.0%
! TCACTCTGGGTGATAAATTT+TGG + Chr2:36253420-36253439 MsG0280008684.01.T01:CDS 35.0%
AACCGGAAAATATAAGGTGG+TGG + Chr2:36253370-36253389 MsG0280008684.01.T01:CDS 40.0%
AAGAATGGATGGGATCAGAA+TGG + Chr2:36253494-36253513 MsG0280008684.01.T01:CDS 40.0%
CATGCATATCAATCCATTGC+AGG - Chr2:36253192-36253211 None:intergenic 40.0%
CATTCATGGGCTTATTGCAA+TGG + Chr2:36253952-36253971 MsG0280008684.01.T01:CDS 40.0%
CTCGTTCGAATAAGAATGGA+TGG + Chr2:36253483-36253502 MsG0280008684.01.T01:CDS 40.0%
GAAACAATTGGCATAACAGG+TGG - Chr2:36253689-36253708 None:intergenic 40.0%
GAGTACGAAATCTTCGGAAA+TGG - Chr2:36253123-36253142 None:intergenic 40.0%
GTGACTGAGTACGAAATCTT+CGG - Chr2:36253129-36253148 None:intergenic 40.0%
TACATCGAAAAGGAAGCAGA+GGG - Chr2:36253463-36253482 None:intergenic 40.0%
TACGAGGCGAATTAGATAGA+AGG - Chr2:36252860-36252879 None:intergenic 40.0%
TTCGAACGAGTACATCGAAA+AGG - Chr2:36253473-36253492 None:intergenic 40.0%
TTCGTGGAGATGATTTGATG+AGG - Chr2:36253034-36253053 None:intergenic 40.0%
! AGGTCAGTGTCGAAAATAGT+CGG + Chr2:36253281-36253300 MsG0280008684.01.T01:CDS 40.0%
! TGCCACCACCTTATATTTTC+CGG - Chr2:36253375-36253394 None:intergenic 40.0%
!! GCCAATTGTTTCTGTGTTGA+TGG + Chr2:36253697-36253716 MsG0280008684.01.T01:CDS 40.0%
AATGGATGGGATCAGAATGG+TGG + Chr2:36253497-36253516 MsG0280008684.01.T01:CDS 45.0%
CATTGCAGGAACCAAGAACT+CGG - Chr2:36253178-36253197 None:intergenic 45.0%
CTAGGTTCCAAAAACGGAGA+TGG - Chr2:36253256-36253275 None:intergenic 45.0%
GAAGACTGTAACCGAGTTCT+TGG + Chr2:36253164-36253183 MsG0280008684.01.T01:CDS 45.0%
GAGGTGAGAACTTTCACTCT+GGG + Chr2:36253407-36253426 MsG0280008684.01.T01:CDS 45.0%
GTACATCGAAAAGGAAGCAG+AGG - Chr2:36253464-36253483 None:intergenic 45.0%
GTACTTCATCGAATCCCTGA+GGG - Chr2:36253667-36253686 None:intergenic 45.0%
TACTTCATCGAATCCCTGAG+GGG - Chr2:36253666-36253685 None:intergenic 45.0%
TCGTGGCTAGGTTCCAAAAA+CGG - Chr2:36253262-36253281 None:intergenic 45.0%
TGAGGTGAGAACTTTCACTC+TGG + Chr2:36253406-36253425 MsG0280008684.01.T01:CDS 45.0%
TTTGCCCTTCGCAATAACGT+TGG + Chr2:36253548-36253567 MsG0280008684.01.T01:CDS 45.0%
! TAAGGTGGTGGCATTCAGTT+CGG + Chr2:36253382-36253401 MsG0280008684.01.T01:CDS 45.0%
! TATTTTCGACACTGACCTCG+TGG - Chr2:36253279-36253298 None:intergenic 45.0%
!! AGGTGCATTTTGACGAAGGT+GGG - Chr2:36253014-36253033 None:intergenic 45.0%
!! GATGAGGTGCATTTTGACGA+AGG - Chr2:36253018-36253037 None:intergenic 45.0%
AACTTCGGCGATGAGATCGT+CGG - Chr2:36252913-36252932 None:intergenic 50.0%
ACTTCATCGAATCCCTGAGG+GGG - Chr2:36253665-36253684 None:intergenic 50.0%
CGAGTTCTTGGTTCCTGCAA+TGG + Chr2:36253176-36253195 MsG0280008684.01.T01:CDS 50.0%
GGTACTTCATCGAATCCCTG+AGG - Chr2:36253668-36253687 None:intergenic 50.0%
TTTGACGAAGGTGGGATCAG+AGG - Chr2:36253006-36253025 None:intergenic 50.0%
! GACGGCACTTTTGCTTTACG+AGG - Chr2:36252876-36252895 None:intergenic 50.0%
! GTGAGGTGTTTAGGGTTTCG+TGG - Chr2:36253050-36253069 None:intergenic 50.0%
!! GAGGTGCATTTTGACGAAGG+TGG - Chr2:36253015-36253034 None:intergenic 50.0%
!!! GTTTTTGGAACCTAGCCACG+AGG + Chr2:36253261-36253280 MsG0280008684.01.T01:CDS 50.0%
ACTTCGGCGATGAGATCGTC+GGG - Chr2:36252912-36252931 None:intergenic 55.0%
GGTGGCATTCAGTTCGGTTG+AGG + Chr2:36253388-36253407 MsG0280008684.01.T01:CDS 55.0%
TCGGGGAGGATCAATGACGA+CGG - Chr2:36252894-36252913 None:intergenic 55.0%
ACACAGTTGCTGCCCCCTCA+GGG + Chr2:36253650-36253669 MsG0280008684.01.T01:CDS 60.0%
CTTCGGCGATGAGATCGTCG+GGG - Chr2:36252911-36252930 None:intergenic 60.0%
TCGACACTGACCTCGTGGCT+AGG - Chr2:36253274-36253293 None:intergenic 60.0%
CACACAGTTGCTGCCCCCTC+AGG + Chr2:36253649-36253668 MsG0280008684.01.T01:CDS 65.0%
CGGCGATGAGATCGTCGGGG+AGG - Chr2:36252908-36252927 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
Chr2 gene 36252849 36254006 36252849 ID=MsG0280008684.01;Name=MsG0280008684.01
Chr2 mRNA 36252849 36254006 36252849 ID=MsG0280008684.01.T01;Parent=MsG0280008684.01;Name=MsG0280008684.01.T01;_AED=0.27;_eAED=0.27;_QI=0|-1|0|1|-1|1|1|0|385
Chr2 exon 36252849 36254006 36252849 ID=MsG0280008684.01.T01:exon:20529;Parent=MsG0280008684.01.T01
Chr2 CDS 36252849 36254006 36252849 ID=MsG0280008684.01.T01:cds;Parent=MsG0280008684.01.T01
Gene Sequence

>MsG0280008684.01.T01

ATGACTAACCTTCTATCTAATTCGCCTCGTAAAGCAAAAGTGCCGTCGTCATTGATCCTCCCCGACGATCTCATCGCCGAAGTTCTATCATTGCATGACATAAAATTTCTGATGCAACTCAAATGTGTTTGCAAATCATGGAACTCACTCATCTCCTCTGATCCCACCTTCGTCAAAATGCACCTCATCAAATCATCTCCACGAAACCCTAAACACCTCACAATGTTTTCTTGCAAGAACAAAGACAATTCCTTGCCTAATCAGTTTATAACCATTTCCGAAGATTTCGTACTCAGTCACTATCAATTCAAAAACGAAGACTGTAACCGAGTTCTTGGTTCCTGCAATGGATTGATATGCATGCTCAGTGAATATATAAACCAATACCAAAATGTTCAAAACTTCCATCTCCGTTTTTGGAACCTAGCCACGAGGTCAGTGTCGAAAATAGTCGGCTGTGTTAGTTATGTTTTTATGGACCAGCATGACTATTTCAGATTTTCATTTGGTTACGATAATACAACCGGAAAATATAAGGTGGTGGCATTCAGTTCGGTTGAGGTGAGAACTTTCACTCTGGGTGATAAATTTTGGAGAAATATTCAAAGATTCCCTCTGCTTCCTTTTCGATGTACTCGTTCGAATAAGAATGGATGGGATCAGAATGGTGGTGTCTATTTGTGTAATAGTATCAATTGGTTTGCCCTTCGCAATAACGTTGGTTATAATGAATGGAAGGATCTTAATCTTAGTATTGAGCAATTTGTGATTATCTCTCTTGATTTGGCGACAGACTCATACACACAGTTGCTGCCCCCTCAGGGATTCGATGAAGTACCACCTGTTATGCCAATTGTTTCTGTGTTGATGGATTGTCTTTGTTTTTGTCATTATTCCAACGGAGATGATTTTGTTATATGGAAAATGACAGAATTTAGAGTTGAAGAGTCTTGGACTAAGTTCCTTAAATTTAATTTCGTAGATCGTCGTTTGATCCCATTATTTGAGAATGGTGATGCATTGCTGTTGTTAAGTGATCAAGAACACATAGTTCGCTATAATAGGAAAGATGATAAAGTAGAGCGAAGAAAAATCAGTGATGACATTCATGGGCTTATTGCAATGGATTATATCGAAAGTCTTGTTTCAACTTGTTGA
Protein sequence

>MsG0280008684.01.T01

MTNLLSNSPRKAKVPSSLILPDDLIAEVLSLHDIKFLMQLKCVCKSWNSLISSDPTFVKMHLIKSSPRNPKHLTMFSCKNKDNSLPNQFITISEDFVLSHYQFKNEDCNRVLGSCNGLICMLSEYINQYQNVQNFHLRFWNLATRSVSKIVGCVSYVFMDQHDYFRFSFGYDNTTGKYKVVAFSSVEVRTFTLGDKFWRNIQRFPLLPFRCTRSNKNGWDQNGGVYLCNSINWFALRNNVGYNEWKDLNLSIEQFVIISLDLATDSYTQLLPPQGFDEVPPVMPIVSVLMDCLCFCHYSNGDDFVIWKMTEFRVEESWTKFLKFNFVDRRLIPLFENGDALLLLSDQEHIVRYNRKDDKVERRKISDDIHGLIAMDYIESLVSTC*