AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0380011918.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0380011918.01.T01 MTR_3g010590 85.650 223 29 1 18 237 164 386 5.88e-134 382
MsG0380011918.01.T01 MTR_3g023930 68.750 224 58 3 18 237 153 368 7.66e-97 287
MsG0380011918.01.T01 MTR_3g010520 68.161 223 61 3 18 237 145 360 3.84e-96 285
MsG0380011918.01.T01 MTR_3g030240 67.411 224 59 4 18 237 165 378 1.33e-95 285
MsG0380011918.01.T01 MTR_3g010920 64.444 225 67 5 18 237 166 382 2.05e-89 269
MsG0380011918.01.T01 MTR_3g024150 62.771 231 69 4 18 237 162 386 3.94e-89 268
MsG0380011918.01.T01 MTR_3g030250 63.877 227 67 4 18 237 162 380 1.91e-86 261
MsG0380011918.01.T01 MTR_3g010970 62.332 223 73 4 18 237 178 392 1.24e-84 257
MsG0380011918.01.T01 MTR_3g010870 60.426 235 72 3 18 237 157 385 4.51e-83 253
MsG0380011918.01.T01 MTR_3g006500 61.233 227 73 5 18 237 152 370 3.11e-80 245
MsG0380011918.01.T01 MTR_3g030330 60.606 231 78 5 18 237 144 372 8.10e-80 244
MsG0380011918.01.T01 MTR_3g010620 58.369 233 81 5 18 237 164 393 5.97e-77 238
MsG0380011918.01.T01 MTR_3g023940 58.824 238 69 4 17 237 159 384 5.54e-75 232
MsG0380011918.01.T01 MTR_0044s0300 53.814 236 86 5 18 237 162 390 1.77e-74 231
MsG0380011918.01.T01 MTR_2g078870 53.070 228 93 5 19 237 86 308 2.70e-68 213
MsG0380011918.01.T01 MTR_1g113900 51.709 234 92 6 18 237 20 246 2.16e-67 208
MsG0380011918.01.T01 MTR_3g010870 60.870 184 61 2 59 237 140 317 1.02e-64 204
MsG0380011918.01.T01 MTR_1004s0010 50.661 227 95 5 19 237 143 360 1.61e-64 204
MsG0380011918.01.T01 MTR_2g078900 57.513 193 63 6 19 199 161 346 4.63e-64 203
MsG0380011918.01.T01 MTR_0760s0010 50.220 227 96 5 19 237 173 390 4.71e-63 202
MsG0380011918.01.T01 MTR_6g065980 50.216 231 97 7 19 237 135 359 8.66e-63 200
MsG0380011918.01.T01 MTR_2g078850 54.378 217 77 7 19 220 158 367 1.37e-61 197
MsG0380011918.01.T01 MTR_3g010880 51.037 241 73 7 18 237 125 341 4.64e-61 195
MsG0380011918.01.T01 MTR_5g046300 48.400 250 101 7 3 237 115 351 4.86e-60 193
MsG0380011918.01.T01 MTR_5g046290 48.400 250 101 7 3 237 115 351 4.86e-60 193
MsG0380011918.01.T01 MTR_5g046280 48.000 250 102 7 3 237 18 254 4.88e-60 190
MsG0380011918.01.T01 MTR_3g030320 49.160 238 96 9 18 237 69 299 1.85e-59 190
MsG0380011918.01.T01 MTR_3g006570 48.148 243 95 8 18 237 143 377 5.71e-59 191
MsG0380011918.01.T01 MTR_3g036430 48.718 234 98 6 18 237 118 343 3.40e-57 185
MsG0380011918.01.T01 MTR_3g036335 48.117 239 93 8 18 237 169 395 8.11e-57 186
MsG0380011918.01.T01 MTR_3g024110 48.291 234 103 6 15 237 222 448 2.86e-56 186
MsG0380011918.01.T01 MTR_3g083660 48.571 210 97 4 30 234 75 278 7.19e-56 180
MsG0380011918.01.T01 MTR_1g115160 45.455 231 109 6 18 237 143 367 9.98e-56 182
MsG0380011918.01.T01 MTR_2g021190 45.902 244 96 8 18 237 142 373 2.49e-55 181
MsG0380011918.01.T01 MTR_6g013270 46.094 256 101 12 11 237 146 393 1.07e-54 180
MsG0380011918.01.T01 MTR_6g014720 45.669 254 104 11 11 237 129 375 1.47e-54 179
MsG0380011918.01.T01 MTR_3g010430 44.488 254 91 7 17 237 157 393 1.52e-53 178
MsG0380011918.01.T01 MTR_1g115185 47.500 240 99 9 18 237 168 400 2.70e-53 177
MsG0380011918.01.T01 MTR_3g006530 45.064 233 106 8 18 237 174 397 3.50e-51 171
MsG0380011918.01.T01 MTR_3g030350 50.226 221 89 7 33 237 176 391 8.94e-51 170
MsG0380011918.01.T01 MTR_1g114650 46.930 228 94 9 26 237 15 231 7.75e-50 163
MsG0380011918.01.T01 MTR_3g083640 44.538 238 106 7 15 237 177 403 1.24e-48 165
MsG0380011918.01.T01 MTR_5g046260 44.105 229 78 6 18 237 111 298 1.36e-48 162
MsG0380011918.01.T01 MTR_3g030310 42.975 242 110 11 18 237 156 391 3.05e-48 163
MsG0380011918.01.T01 MTR_3g096280 43.154 241 85 7 18 237 134 343 4.06e-47 159
MsG0380011918.01.T01 MTR_2g029990 43.802 242 102 9 18 237 174 403 2.15e-46 159
MsG0380011918.01.T01 MTR_5g011200 45.045 222 94 9 34 237 164 375 4.06e-46 157
MsG0380011918.01.T01 MTR_3g006640 39.689 257 112 9 17 236 42 292 4.72e-46 155
MsG0380011918.01.T01 MTR_4g031770 40.161 249 118 6 18 237 123 369 2.86e-43 150
MsG0380011918.01.T01 MTR_1g112930 41.841 239 108 9 18 236 148 375 9.83e-43 149
MsG0380011918.01.T01 MTR_1g055375 40.574 244 114 7 18 237 131 367 2.35e-42 147
MsG0380011918.01.T01 MTR_1g114700 42.128 235 116 8 17 237 160 388 1.01e-41 146
MsG0380011918.01.T01 MTR_7g013590 39.300 257 114 10 17 237 154 404 1.31e-41 146
MsG0380011918.01.T01 MTR_7g007300 44.017 234 101 10 18 237 229 446 5.49e-41 145
MsG0380011918.01.T01 MTR_6g004660 39.919 248 113 11 15 237 145 381 2.11e-40 142
MsG0380011918.01.T01 MTR_1g054725 38.912 239 111 7 22 237 150 376 2.44e-40 142
MsG0380011918.01.T01 MTR_3g036290 40.426 235 107 9 17 237 142 357 4.83e-40 141
MsG0380011918.01.T01 MTR_4g055060 39.676 247 108 9 18 237 155 387 1.90e-39 140
MsG0380011918.01.T01 MTR_3g024130 42.105 228 97 9 30 237 103 315 2.04e-39 139
MsG0380011918.01.T01 MTR_2g021155 39.496 238 114 7 22 237 727 956 1.00e-38 143
MsG0380011918.01.T01 MTR_2g021155 40.594 202 85 8 33 212 174 362 2.99e-36 135
MsG0380011918.01.T01 MTR_6g027910 36.759 253 112 10 18 237 138 375 2.18e-38 137
MsG0380011918.01.T01 MTR_6g007135 40.000 235 112 8 23 237 165 390 3.02e-38 137
MsG0380011918.01.T01 MTR_3g009240 41.057 246 102 11 18 237 155 383 8.92e-38 135
MsG0380011918.01.T01 MTR_6g007150 37.247 247 120 10 18 237 100 338 1.35e-37 134
MsG0380011918.01.T01 MTR_2g021210 37.083 240 121 8 15 237 199 425 1.47e-37 136
MsG0380011918.01.T01 MTR_3g007410 40.081 247 108 10 15 236 171 402 1.81e-37 135
MsG0380011918.01.T01 MTR_6g027890 36.882 263 106 12 18 237 80 325 1.94e-37 134
MsG0380011918.01.T01 MTR_3g006670 39.033 269 112 12 3 237 160 410 2.14e-37 135
MsG0380011918.01.T01 MTR_3g007360 40.081 247 108 10 15 236 171 402 2.89e-37 135
MsG0380011918.01.T01 MTR_6g021880 39.271 247 110 10 18 237 149 382 3.23e-37 134
MsG0380011918.01.T01 MTR_7g407070 39.370 254 105 11 18 237 161 399 5.16e-37 134
MsG0380011918.01.T01 MTR_3g013770 39.431 246 107 10 18 237 159 388 8.46e-37 133
MsG0380011918.01.T01 MTR_3g010390 39.919 248 107 12 18 237 165 398 1.01e-36 133
MsG0380011918.01.T01 MTR_3g436150 38.710 248 110 9 18 237 160 393 1.44e-36 133
MsG0380011918.01.T01 MTR_6g048140 37.975 237 122 8 18 237 175 403 2.58e-36 132
MsG0380011918.01.T01 MTR_3g014540 37.652 247 110 10 18 237 149 378 3.78e-36 131
MsG0380011918.01.T01 MTR_1g055065 38.136 236 109 8 28 237 64 288 1.20e-35 128
MsG0380011918.01.T01 MTR_3g007270 37.600 250 107 10 18 237 180 410 1.80e-35 130
MsG0380011918.01.T01 MTR_3g011020 37.302 252 117 10 11 237 136 371 2.64e-35 129
MsG0380011918.01.T01 MTR_6g053240 38.288 222 116 8 33 237 179 396 2.90e-35 129
MsG0380011918.01.T01 MTR_1g058190 40.773 233 95 11 33 235 150 369 8.35e-35 127
MsG0380011918.01.T01 MTR_8g062660 39.908 218 102 9 33 237 180 381 8.45e-35 131
MsG0380011918.01.T01 MTR_3g011060 39.749 239 102 11 23 237 167 387 2.70e-34 127
MsG0380011918.01.T01 MTR_7g498320 50.000 144 56 4 71 209 84 216 2.74e-34 122
MsG0380011918.01.T01 MTR_4g132560 35.659 258 119 9 15 237 14 259 4.04e-34 123
MsG0380011918.01.T01 MTR_2g021252 36.364 253 117 10 3 236 157 384 4.54e-34 126
MsG0380011918.01.T01 MTR_3g011100 37.970 266 122 11 3 237 349 602 5.34e-34 128
MsG0380011918.01.T01 MTR_3g096250 38.158 228 82 6 18 237 170 346 1.13e-33 124
MsG0380011918.01.T01 MTR_2g021150 36.777 242 116 12 20 237 141 369 2.35e-33 124
MsG0380011918.01.T01 MTR_3g009300 38.174 241 113 12 18 237 128 353 3.08e-33 123
MsG0380011918.01.T01 MTR_6g004210 36.940 268 110 12 18 237 160 416 3.51e-33 124
MsG0380011918.01.T01 MTR_3g007330 39.286 224 99 9 34 237 187 393 4.23e-33 124
MsG0380011918.01.T01 MTR_7g074260 39.834 241 87 9 18 237 24 227 5.63e-33 119
MsG0380011918.01.T01 MTR_3g009310 36.515 241 116 10 18 237 167 391 1.42e-32 122
MsG0380011918.01.T01 MTR_6g053260 37.104 221 118 8 34 237 484 700 1.44e-32 125
MsG0380011918.01.T01 MTR_6g048120 35.021 237 125 10 23 237 179 408 6.14e-32 120
MsG0380011918.01.T01 MTR_3g009260 40.164 244 105 13 18 237 159 385 2.83e-31 119
MsG0380011918.01.T01 MTR_3g007390 39.013 223 97 10 33 237 3 204 6.84e-31 113
MsG0380011918.01.T01 MTR_3g014570 37.500 248 110 12 18 237 149 379 9.35e-31 117
MsG0380011918.01.T01 MTR_3g007430 36.992 246 108 10 18 237 163 387 1.77e-30 116
MsG0380011918.01.T01 MTR_8g054320 36.752 234 117 10 18 237 85 301 3.52e-30 114
MsG0380011918.01.T01 MTR_2g435950 37.118 229 108 9 27 237 87 297 6.04e-30 113
MsG0380011918.01.T01 MTR_1g100763 44.970 169 77 7 51 211 138 298 1.29e-29 112
MsG0380011918.01.T01 MTR_3g007300 36.017 236 107 11 18 237 160 367 2.36e-29 113
MsG0380011918.01.T01 MTR_3g013740 37.349 249 112 13 18 237 174 407 2.53e-29 114
MsG0380011918.01.T01 MTR_1g115180 47.945 146 63 5 97 236 70 208 2.59e-29 109
MsG0380011918.01.T01 MTR_3g006550 41.243 177 54 5 62 237 11 138 3.65e-29 107
MsG0380011918.01.T01 MTR_7g067680 37.445 227 106 9 18 235 177 376 1.18e-28 112
MsG0380011918.01.T01 MTR_5g009060 38.095 231 92 11 34 236 191 398 1.87e-28 111
MsG0380011918.01.T01 MTR_5g007610 37.872 235 94 12 33 237 189 401 2.17e-28 111
MsG0380011918.01.T01 MTR_4g061340 35.484 248 113 11 18 237 148 376 8.58e-28 109
MsG0380011918.01.T01 MTR_1g056710 37.805 246 118 8 18 236 151 388 8.84e-28 109
MsG0380011918.01.T01 MTR_1g057890 38.261 230 116 12 18 237 144 357 1.38e-27 108
MsG0380011918.01.T01 MTR_3g024040 33.475 236 130 11 19 237 148 373 1.51e-27 108
MsG0380011918.01.T01 MTR_1g056280 37.864 206 93 7 40 214 1 202 4.62e-27 103
MsG0380011918.01.T01 MTR_3g096270 57.522 113 38 3 29 131 136 248 6.14e-27 105
MsG0380011918.01.T01 MTR_5g057710 36.515 241 116 13 18 237 171 395 7.84e-27 107
MsG0380011918.01.T01 MTR_5g057790 35.685 241 117 12 18 237 171 394 1.75e-26 105
MsG0380011918.01.T01 MTR_3g058470 32.189 233 114 7 18 237 171 372 2.79e-26 105
MsG0380011918.01.T01 MTR_1g056270 36.058 208 108 9 38 237 32 222 9.68e-26 100
MsG0380011918.01.T01 MTR_5g056990 35.443 237 122 12 16 237 20 240 1.54e-25 100
MsG0380011918.01.T01 MTR_1g055070 35.345 232 96 9 26 237 196 393 2.99e-25 102
MsG0380011918.01.T01 MTR_3g010870 62.195 82 21 1 18 89 157 238 5.01e-25 100
MsG0380011918.01.T01 MTR_1g055055 39.024 205 103 8 18 215 152 341 6.39e-25 100
MsG0380011918.01.T01 MTR_4g108820 39.726 146 74 4 29 163 148 290 1.24e-24 99.8
MsG0380011918.01.T01 MTR_1g055045 40.741 162 85 7 80 237 8 162 1.42e-24 95.9
MsG0380011918.01.T01 MTR_5g057690 35.366 246 116 13 18 237 156 384 7.99e-24 98.6
MsG0380011918.01.T01 MTR_0015s0100 35.979 189 89 6 51 237 99 257 1.68e-23 95.5
MsG0380011918.01.T01 MTR_3g006480 46.903 113 53 3 51 159 125 234 2.15e-22 92.8
MsG0380011918.01.T01 MTR_3g010440 37.433 187 93 8 67 237 154 332 3.73e-22 93.2
MsG0380011918.01.T01 MTR_5g022420 31.330 233 134 9 24 237 153 378 4.61e-22 93.6
MsG0380011918.01.T01 MTR_1g094210 33.796 216 120 10 33 237 196 399 9.70e-22 92.8
MsG0380011918.01.T01 MTR_4g107820 34.061 229 115 10 29 237 174 386 1.09e-21 92.8
MsG0380011918.01.T01 MTR_4g107780 34.061 229 115 10 29 237 174 386 1.09e-21 92.8
MsG0380011918.01.T01 MTR_4g107780 34.061 229 115 10 29 237 174 386 1.17e-21 92.8
MsG0380011918.01.T01 MTR_4g107820 34.061 229 115 10 29 237 174 386 1.28e-21 92.8
MsG0380011918.01.T01 MTR_5g057020 38.690 168 77 10 18 164 156 318 1.66e-21 91.7
MsG0380011918.01.T01 MTR_1g097560 32.075 212 124 7 33 237 176 374 5.61e-21 90.5
MsG0380011918.01.T01 MTR_2g047892 29.921 254 131 11 14 236 159 396 1.26e-20 89.7
MsG0380011918.01.T01 MTR_2g060555 40.602 133 73 5 33 160 88 219 1.54e-20 88.2
MsG0380011918.01.T01 MTR_2g046900 31.174 247 131 11 18 237 151 385 3.69e-20 88.6
MsG0380011918.01.T01 MTR_5g017515 49.485 97 41 3 45 135 99 193 4.03e-20 85.5
MsG0380011918.01.T01 MTR_2g043410 31.837 245 125 10 30 236 176 416 4.20e-20 88.6
MsG0380011918.01.T01 MTR_0707s0020 29.457 258 135 11 17 235 193 442 4.39e-20 88.6
MsG0380011918.01.T01 MTR_5g026830 40.741 135 64 6 105 237 161 281 7.34e-20 86.3
MsG0380011918.01.T01 MTR_1g056290 32.432 222 103 8 22 237 135 315 1.01e-19 86.3
MsG0380011918.01.T01 MTR_2g046920 38.732 142 74 6 33 162 168 308 1.67e-19 86.7
MsG0380011918.01.T01 MTR_1g050542 33.186 226 117 12 33 237 193 405 2.47e-19 86.3
MsG0380011918.01.T01 MTR_2g046800 34.247 219 118 9 34 237 186 393 2.50e-19 86.3
MsG0380011918.01.T01 MTR_2g046860 35.329 167 86 6 18 162 35 201 2.66e-19 85.1
MsG0380011918.01.T01 MTR_1g094210 33.854 192 105 9 33 213 196 376 2.87e-19 86.3
MsG0380011918.01.T01 MTR_6g086920 28.090 267 143 9 17 236 205 469 5.76e-19 85.5
MsG0380011918.01.T01 MTR_4g133170 28.571 224 130 9 33 237 144 356 6.95e-19 84.7
MsG0380011918.01.T01 MTR_6g016285 28.571 252 129 7 33 236 169 417 8.73e-19 84.7
MsG0380011918.01.T01 MTR_6g088385 28.077 260 135 10 18 235 68 317 8.95e-19 84.0
MsG0380011918.01.T01 MTR_6g007130 37.209 129 67 5 113 237 4 122 1.07e-18 79.3
MsG0380011918.01.T01 MTR_1g054575 34.503 171 88 7 11 162 167 332 1.09e-18 85.1
MsG0380011918.01.T01 MTR_2g046830 31.507 219 124 12 33 236 168 375 1.60e-18 84.0
MsG0380011918.01.T01 MTR_3g080370 28.517 263 132 10 24 236 161 417 1.96e-18 84.0
MsG0380011918.01.T01 MTR_2g055970 31.696 224 120 11 34 237 351 561 1.98e-18 84.0
MsG0380011918.01.T01 MTR_7g055830 31.557 244 120 11 34 236 119 356 1.11e-17 81.3
MsG0380011918.01.T01 MTR_7g055870 31.557 244 120 11 34 236 187 424 1.54e-17 81.3
MsG0380011918.01.T01 MTR_5g043160 29.730 259 139 11 18 236 202 457 2.03e-17 80.9
MsG0380011918.01.T01 MTR_7g055930 31.148 244 121 11 34 236 187 424 2.37e-17 80.9
MsG0380011918.01.T01 MTR_2g006360 37.762 143 73 8 29 161 153 289 2.84e-17 80.1
MsG0380011918.01.T01 MTR_0128s0020 28.936 235 129 10 30 235 167 392 3.22e-17 80.1
MsG0380011918.01.T01 MTR_3g011660 39.437 142 64 6 102 237 1 126 3.25e-17 75.5
MsG0380011918.01.T01 MTR_6g092560 27.559 254 144 9 17 235 146 394 3.54e-17 80.1
MsG0380011918.01.T01 MTR_1g097330 31.604 212 107 11 29 215 149 347 5.14e-17 79.7
MsG0380011918.01.T01 MTR_3g013950 33.526 173 85 6 19 161 144 316 5.39e-17 79.3
MsG0380011918.01.T01 MTR_2g047832 33.129 163 75 6 33 162 172 333 8.25e-17 79.0
MsG0380011918.01.T01 MTR_7g070880 32.673 202 89 8 17 172 162 362 8.33e-17 79.0
MsG0380011918.01.T01 MTR_1g015730 29.876 241 122 12 33 235 162 393 1.23e-16 78.6
MsG0380011918.01.T01 MTR_4g037465 28.704 216 127 6 32 222 167 380 1.51e-16 78.2
MsG0380011918.01.T01 MTR_7g070830 28.916 249 133 9 25 236 179 420 2.13e-16 77.8
MsG0380011918.01.T01 MTR_8g467140 34.014 147 79 5 34 162 172 318 2.18e-16 77.4
MsG0380011918.01.T01 MTR_7g062100 31.602 231 123 11 34 237 175 397 2.49e-16 77.8
MsG0380011918.01.T01 MTR_8g101580 30.667 225 122 11 33 237 185 395 2.81e-16 77.4
MsG0380011918.01.T01 MTR_7g066840 29.150 247 119 12 31 236 166 397 3.14e-16 77.4
MsG0380011918.01.T01 MTR_7g056390 30.040 253 125 12 27 236 173 416 3.28e-16 77.4
MsG0380011918.01.T01 MTR_7g066100 34.503 171 80 7 33 171 167 337 3.51e-16 77.0
MsG0380011918.01.T01 MTR_7g056290 30.800 250 127 12 27 236 177 420 3.69e-16 77.4
MsG0380011918.01.T01 MTR_7g055987 35.196 179 89 8 29 185 162 335 3.99e-16 77.0
MsG0380011918.01.T01 MTR_0267s0050 34.177 158 78 5 30 161 157 314 4.07e-16 77.0
MsG0380011918.01.T01 MTR_3g072470 31.452 248 129 12 27 236 173 417 4.38e-16 77.0
MsG0380011918.01.T01 MTR_2g426070 31.905 210 108 10 34 219 168 366 4.58e-16 77.0
MsG0380011918.01.T01 MTR_7g056820 35.032 157 76 5 31 161 151 307 5.22e-16 76.6
MsG0380011918.01.T01 MTR_7g061050 32.751 229 121 11 33 236 163 383 5.29e-16 76.6
MsG0380011918.01.T01 MTR_3g464500 29.583 240 127 9 33 236 169 402 1.44e-15 75.5
MsG0380011918.01.T01 MTR_1g097490 33.113 151 87 4 26 163 182 331 1.58e-15 75.1
MsG0380011918.01.T01 MTR_7g066000 30.213 235 124 9 33 235 175 401 1.86e-15 75.1
MsG0380011918.01.T01 MTR_5g056020 28.405 257 124 10 33 236 171 420 1.88e-15 75.5
MsG0380011918.01.T01 MTR_7g055953 33.548 155 81 5 28 161 86 239 1.89e-15 74.3
MsG0380011918.01.T01 MTR_0128s0070 27.660 235 132 11 30 235 170 395 2.08e-15 75.1
MsG0380011918.01.T01 MTR_6g017305 33.121 157 77 5 33 161 45 201 2.36e-15 73.9
MsG0380011918.01.T01 MTR_7g445890 28.629 248 127 11 33 236 141 382 2.93e-15 74.3
MsG0380011918.01.T01 MTR_7g066030 30.435 230 127 9 33 236 180 402 4.84e-15 73.9
MsG0380011918.01.T01 MTR_7g009265 27.344 256 144 9 19 236 72 323 4.99e-15 73.6
MsG0380011918.01.T01 MTR_4g108810 32.402 179 99 5 71 237 69 237 6.13e-15 72.0
MsG0380011918.01.T01 MTR_1g097370 31.863 204 113 11 34 214 136 336 6.99e-15 73.6
MsG0380011918.01.T01 MTR_7g028660 28.692 237 121 9 33 236 157 378 9.13e-15 73.2
MsG0380011918.01.T01 MTR_6g007140 37.273 110 58 4 113 220 4 104 1.02e-14 69.3
MsG0380011918.01.T01 MTR_0128s0010 28.205 234 139 8 29 236 167 397 1.36e-14 72.8
MsG0380011918.01.T01 MTR_4g129190 31.250 160 76 6 34 161 155 312 2.08e-14 72.0
MsG0380011918.01.T01 MTR_7g034310 32.022 178 94 7 23 181 12 181 2.24e-14 70.5
MsG0380011918.01.T01 MTR_7g060960 28.755 233 137 9 22 235 144 366 2.30e-14 71.6
MsG0380011918.01.T01 MTR_2g043400 31.285 179 85 7 19 161 155 331 2.32e-14 72.0
MsG0380011918.01.T01 MTR_2g025420 27.004 237 130 12 33 237 168 393 2.48e-14 72.0
MsG0380011918.01.T01 MTR_2g010920 24.696 247 145 8 27 236 182 424 2.49e-14 72.0
MsG0380011918.01.T01 MTR_7g061940 28.636 220 115 10 29 228 70 267 2.78e-14 70.5
MsG0380011918.01.T01 MTR_7g056260 32.903 155 77 4 33 161 162 315 3.04e-14 71.2
MsG0380011918.01.T01 MTR_2g028140 31.579 152 80 6 34 161 170 321 3.75e-14 71.2
MsG0380011918.01.T01 MTR_5g058620 27.059 255 138 9 27 235 28 280 4.37e-14 70.5
MsG0380011918.01.T01 MTR_1g058870 27.059 255 138 9 27 235 28 280 4.37e-14 70.5
MsG0380011918.01.T01 MTR_5g069930 29.386 228 130 12 30 234 155 374 4.48e-14 70.9
MsG0380011918.01.T01 MTR_7g061060 29.187 209 119 9 33 216 166 370 7.74e-14 70.5
MsG0380011918.01.T01 MTR_7g060940 27.542 236 130 10 31 235 167 392 8.72e-14 70.1
MsG0380011918.01.T01 MTR_7g056173 31.875 160 77 5 34 161 29 188 9.89e-14 69.7
MsG0380011918.01.T01 MTR_1g097510 36.752 117 64 4 55 162 89 204 1.22e-13 68.9
MsG0380011918.01.T01 MTR_2g047878 31.050 219 122 9 29 236 163 363 1.28e-13 69.7
MsG0380011918.01.T01 MTR_7g056200 28.241 216 121 7 52 236 169 381 1.67e-13 69.3
MsG0380011918.01.T01 MTR_4g013185 31.624 234 105 13 51 236 199 425 2.47e-13 68.9
MsG0380011918.01.T01 MTR_6g017295 30.994 171 90 5 19 161 82 252 2.67e-13 68.9
MsG0380011918.01.T01 MTR_4g030830 32.298 161 77 5 33 161 156 316 3.69e-13 68.6
MsG0380011918.01.T01 MTR_7g113500 25.203 246 141 9 28 236 142 381 3.75e-13 68.2
MsG0380011918.01.T01 MTR_2g031640 26.695 236 124 12 34 237 142 360 4.96e-13 68.2
MsG0380011918.01.T01 MTR_2g025960 26.180 233 138 12 28 237 66 287 6.52e-13 67.4
MsG0380011918.01.T01 MTR_7g061090 29.565 230 129 10 33 236 183 405 6.77e-13 67.8
MsG0380011918.01.T01 MTR_4g134560 24.500 200 135 6 24 210 213 409 7.55e-13 67.8
MsG0380011918.01.T01 MTR_7g056717 28.634 227 130 9 32 236 169 385 1.46e-12 66.6
MsG0380011918.01.T01 MTR_4g024890 28.745 247 118 11 34 237 154 385 2.04e-12 66.2
MsG0380011918.01.T01 MTR_1g068835 25.108 231 129 11 34 237 143 356 2.07e-12 66.2
MsG0380011918.01.T01 MTR_7g445750 34.868 152 70 6 28 150 178 329 2.08e-12 65.9
MsG0380011918.01.T01 MTR_2g425980 25.431 232 130 11 34 237 161 377 2.22e-12 66.2
MsG0380011918.01.T01 MTR_1g442850 30.303 165 96 5 31 176 156 320 2.36e-12 65.9
MsG0380011918.01.T01 MTR_2g028160 28.326 233 129 12 34 237 166 389 2.36e-12 66.2
MsG0380011918.01.T01 MTR_3g083010 28.632 234 127 12 34 237 171 394 2.81e-12 65.9
MsG0380011918.01.T01 MTR_7g078860 32.468 154 78 4 34 161 166 319 3.14e-12 65.9
MsG0380011918.01.T01 MTR_4g013175 34.444 180 76 10 17 161 165 337 3.39e-12 65.9
MsG0380011918.01.T01 MTR_7g056503 27.016 248 135 11 23 236 162 397 4.07e-12 65.5
MsG0380011918.01.T01 MTR_2g024100 29.747 158 84 8 29 160 153 309 4.44e-12 65.1
MsG0380011918.01.T01 MTR_4g070550 29.032 186 92 10 15 161 131 315 4.47e-12 65.1
MsG0380011918.01.T01 MTR_7g091630 25.794 252 138 12 33 237 182 431 1.10e-11 64.3
MsG0380011918.01.T01 MTR_2g024110 24.681 235 134 12 34 237 142 364 1.43e-11 63.5
MsG0380011918.01.T01 MTR_2g010950 26.033 242 134 11 33 236 170 404 3.03e-11 62.8
MsG0380011918.01.T01 MTR_5g096010 26.531 147 56 3 28 164 2 106 4.29e-11 58.5
MsG0380011918.01.T01 MTR_1g068875 22.764 246 145 11 22 237 125 355 4.31e-11 62.4
MsG0380011918.01.T01 MTR_4g030790 32.911 158 74 8 33 161 128 282 4.64e-11 62.0
MsG0380011918.01.T01 MTR_2g010900 28.177 181 96 7 33 180 135 314 5.25e-11 62.0
MsG0380011918.01.T01 MTR_4g117720 31.206 141 80 4 34 157 157 297 6.01e-11 62.0
MsG0380011918.01.T01 MTR_2g026010 26.050 238 126 14 34 237 141 362 6.14e-11 62.0
MsG0380011918.01.T01 MTR_4g011660 25.197 254 139 9 28 236 170 417 7.60e-11 61.6
MsG0380011918.01.T01 MTR_0649s0020 27.273 242 134 11 29 236 154 387 7.71e-11 61.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0380011918.01.T01 AT3G23880 28.194 227 130 10 26 237 153 361 2.64e-13 68.9

Find 44 sgRNAs with CRISPR-Local

Find 54 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATACTTTGGGGACTGATTAT+TGG 0.257323 3:+7939084 MsG0380011918.01.T01:CDS
TCATTTCATTGATGATTATA+AGG 0.298953 3:+7939025 MsG0380011918.01.T01:CDS
TTGATAGGATTGTCAATGTT+TGG 0.310941 3:+7939324 MsG0380011918.01.T01:CDS
CCACAAATGAGGTCAGAATA+TGG 0.318656 3:-7939125 None:intergenic
GTTTAAGTTATTGCCTCCTT+TGG 0.322961 3:+7938968 MsG0380011918.01.T01:CDS
GTTTGGATTATGAAGGAGTA+TGG 0.326969 3:+7939341 MsG0380011918.01.T01:CDS
AAACCCCGATCTTGCATGTT+AGG 0.364708 3:-7939398 None:intergenic
TCATTCTCATTCTTGAAATC+AGG 0.375154 3:-7939251 None:intergenic
CCATATTCTGACCTCATTTG+TGG 0.385795 3:+7939125 MsG0380011918.01.T01:CDS
TTGTTAGTGGCACTGTTAAT+TGG 0.387213 3:+7939159 MsG0380011918.01.T01:CDS
AGAAATATATGAAACAGTAT+AGG 0.392438 3:-7939444 None:intergenic
GAAATATATGAAACAGTATA+GGG 0.410280 3:-7939443 None:intergenic
TGTTCCTAACATGCAAGATC+GGG 0.425336 3:+7939394 MsG0380011918.01.T01:CDS
TTCTGACCTCATTTGTGGAC+AGG 0.439153 3:+7939130 MsG0380011918.01.T01:CDS
TCGAAGTCGCATTGAGAAGT+TGG 0.451084 3:+7939502 MsG0380011918.01.T01:CDS
GGACAGGGAGTATTTGTTAG+TGG 0.453104 3:+7939146 MsG0380011918.01.T01:CDS
TGTCAATGTTTGGATTATGA+AGG 0.458410 3:+7939334 MsG0380011918.01.T01:CDS
GTGTTCCTAACATGCAAGAT+CGG 0.482020 3:+7939393 MsG0380011918.01.T01:CDS
CACAAATGAGGTCAGAATAT+GGG 0.485634 3:-7939124 None:intergenic
ATAGGGTTCGAGATCTTCAT+AGG 0.497054 3:-7939426 None:intergenic
AATATTCAAAGTATCAGTCT+TGG 0.508095 3:-7939537 None:intergenic
TGAGGATGACCAACTGCTGG+TGG 0.513027 3:+7939466 MsG0380011918.01.T01:CDS
TACTGTTTCATATATTTCTG+AGG 0.529153 3:+7939448 MsG0380011918.01.T01:CDS
AGTATGGAAATCGTGAGTCT+TGG 0.531674 3:+7939357 MsG0380011918.01.T01:CDS
TGATTATTGGACAAGAATAC+AGG 0.537972 3:+7939097 MsG0380011918.01.T01:CDS
GAGGATGACCAACTGCTGGT+GGG 0.538432 3:+7939467 MsG0380011918.01.T01:CDS
TAGTGGCACTGTTAATTGGT+TGG 0.552168 3:+7939163 MsG0380011918.01.T01:CDS
TTCTGAGGATGACCAACTGC+TGG 0.554311 3:+7939463 MsG0380011918.01.T01:CDS
TCTTTCTCTTGATTTAGAGA+AGG 0.556477 3:+7939205 MsG0380011918.01.T01:CDS
GAGAATGATACGTTGACCTT+GGG 0.558318 3:+7939266 MsG0380011918.01.T01:CDS
TGTTGCGTGGTGGTTAATGT+CGG 0.565915 3:+7938926 MsG0380011918.01.T01:CDS
CGTTGACCTTGGGTGTGGTG+AGG 0.570466 3:+7939276 MsG0380011918.01.T01:CDS
AGGATGACCAACTGCTGGTG+GGG 0.574662 3:+7939468 MsG0380011918.01.T01:CDS
GAGAAAACCCCACCAGCAGT+TGG 0.576081 3:-7939475 None:intergenic
GTTGACCTTGGGTGTGGTGA+GGG 0.582130 3:+7939277 MsG0380011918.01.T01:CDS
ATACTCCCTGTCCACAAATG+AGG 0.588739 3:-7939136 None:intergenic
TGAGAATGATACGTTGACCT+TGG 0.602356 3:+7939265 MsG0380011918.01.T01:CDS
TCTGACCTCATTTGTGGACA+GGG 0.607427 3:+7939131 MsG0380011918.01.T01:CDS
TGAAGAAAAGCATTATCCAA+AGG 0.617074 3:-7938984 None:intergenic
TCTCATTCTTGAAATCAGGT+AGG 0.621451 3:-7939247 None:intergenic
TGATACGTTGACCTTGGGTG+TGG 0.638535 3:+7939271 MsG0380011918.01.T01:CDS
GCAATCCCTCACCACACCCA+AGG 0.639539 3:-7939282 None:intergenic
AGAAAAGCATTATCCAAAGG+AGG 0.640840 3:-7938981 None:intergenic
GTTCCTAACATGCAAGATCG+GGG 0.648142 3:+7939395 MsG0380011918.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AGAAATATATGAAACAGTAT+AGG - Chr3:7939447-7939466 None:intergenic 20.0%
!! GAAATATATGAAACAGTATA+GGG - Chr3:7939446-7939465 None:intergenic 20.0%
!!! AAGTTTTTGTTTATACTTTG+GGG + Chr3:7939072-7939091 MsG0380011918.01.T01:CDS 20.0%
!!! GAAGTTTTTGTTTATACTTT+GGG + Chr3:7939071-7939090 MsG0380011918.01.T01:CDS 20.0%
!!! TCATTTCATTGATGATTATA+AGG + Chr3:7939025-7939044 MsG0380011918.01.T01:CDS 20.0%
!!! TGAAGTTTTTGTTTATACTT+TGG + Chr3:7939070-7939089 MsG0380011918.01.T01:CDS 20.0%
!! AATATTCAAAGTATCAGTCT+TGG - Chr3:7939540-7939559 None:intergenic 25.0%
!! TACTGTTTCATATATTTCTG+AGG + Chr3:7939448-7939467 MsG0380011918.01.T01:CDS 25.0%
!!! ATGTAGACTTTTGAGTATAT+CGG - Chr3:7939587-7939606 None:intergenic 25.0%
TCATTCTCATTCTTGAAATC+AGG - Chr3:7939254-7939273 None:intergenic 30.0%
TCTTTCTCTTGATTTAGAGA+AGG + Chr3:7939205-7939224 MsG0380011918.01.T01:CDS 30.0%
TGATTATTGGACAAGAATAC+AGG + Chr3:7939097-7939116 MsG0380011918.01.T01:CDS 30.0%
TGTCAATGTTTGGATTATGA+AGG + Chr3:7939334-7939353 MsG0380011918.01.T01:CDS 30.0%
TTGATAGGATTGTCAATGTT+TGG + Chr3:7939324-7939343 MsG0380011918.01.T01:CDS 30.0%
! GCTTTTCTTCATATAAGCTT+TGG + Chr3:7938996-7939015 MsG0380011918.01.T01:CDS 30.0%
!! TGAAGAAAAGCATTATCCAA+AGG - Chr3:7938987-7939006 None:intergenic 30.0%
CACAAATGAGGTCAGAATAT+GGG - Chr3:7939127-7939146 None:intergenic 35.0%
GTTTGGATTATGAAGGAGTA+TGG + Chr3:7939341-7939360 MsG0380011918.01.T01:CDS 35.0%
TCTCATTCTTGAAATCAGGT+AGG - Chr3:7939250-7939269 None:intergenic 35.0%
TTGTTAGTGGCACTGTTAAT+TGG + Chr3:7939159-7939178 MsG0380011918.01.T01:CDS 35.0%
! ATACTTTGGGGACTGATTAT+TGG + Chr3:7939084-7939103 MsG0380011918.01.T01:CDS 35.0%
! GTTTAAGTTATTGCCTCCTT+TGG + Chr3:7938968-7938987 MsG0380011918.01.T01:CDS 35.0%
!! AGAAAAGCATTATCCAAAGG+AGG - Chr3:7938984-7939003 None:intergenic 35.0%
!! TCAGAGTTGTTTTCAAACTC+TGG - Chr3:7939563-7939582 None:intergenic 35.0%
!!! ATGTCGGTTCTTTTTTTCTG+TGG + Chr3:7938942-7938961 MsG0380011918.01.T01:CDS 35.0%
!!! GTGTTTTTGCAGGTATTGAT+AGG + Chr3:7939309-7939328 MsG0380011918.01.T01:CDS 35.0%
AGTATGGAAATCGTGAGTCT+TGG + Chr3:7939357-7939376 MsG0380011918.01.T01:CDS 40.0%
ATAGGGTTCGAGATCTTCAT+AGG - Chr3:7939429-7939448 None:intergenic 40.0%
CCACAAATGAGGTCAGAATA+TGG - Chr3:7939128-7939147 None:intergenic 40.0%
CCATATTCTGACCTCATTTG+TGG + Chr3:7939125-7939144 MsG0380011918.01.T01:CDS 40.0%
GAGAATGATACGTTGACCTT+GGG + Chr3:7939266-7939285 MsG0380011918.01.T01:CDS 40.0%
GTGTTCCTAACATGCAAGAT+CGG + Chr3:7939393-7939412 MsG0380011918.01.T01:CDS 40.0%
TAGTGGCACTGTTAATTGGT+TGG + Chr3:7939163-7939182 MsG0380011918.01.T01:CDS 40.0%
TGAGAATGATACGTTGACCT+TGG + Chr3:7939265-7939284 MsG0380011918.01.T01:CDS 40.0%
TGTTCCTAACATGCAAGATC+GGG + Chr3:7939394-7939413 MsG0380011918.01.T01:CDS 40.0%
!! GATTGCTTGTGTGTTTTTGC+AGG + Chr3:7939299-7939318 MsG0380011918.01.T01:CDS 40.0%
AAACCCCGATCTTGCATGTT+AGG - Chr3:7939401-7939420 None:intergenic 45.0%
ATACTCCCTGTCCACAAATG+AGG - Chr3:7939139-7939158 None:intergenic 45.0%
GTTCCTAACATGCAAGATCG+GGG + Chr3:7939395-7939414 MsG0380011918.01.T01:CDS 45.0%
TCGAAGTCGCATTGAGAAGT+TGG + Chr3:7939502-7939521 MsG0380011918.01.T01:CDS 45.0%
TCTGACCTCATTTGTGGACA+GGG + Chr3:7939131-7939150 MsG0380011918.01.T01:CDS 45.0%
TGTTGCGTGGTGGTTAATGT+CGG + Chr3:7938926-7938945 MsG0380011918.01.T01:CDS 45.0%
TTCTGACCTCATTTGTGGAC+AGG + Chr3:7939130-7939149 MsG0380011918.01.T01:CDS 45.0%
!! GGACAGGGAGTATTTGTTAG+TGG + Chr3:7939146-7939165 MsG0380011918.01.T01:CDS 45.0%
TGATACGTTGACCTTGGGTG+TGG + Chr3:7939271-7939290 MsG0380011918.01.T01:CDS 50.0%
! TGGCATCTTTTGTTGCGTGG+TGG + Chr3:7938916-7938935 MsG0380011918.01.T01:CDS 50.0%
! TTCTGAGGATGACCAACTGC+TGG + Chr3:7939463-7939482 MsG0380011918.01.T01:CDS 50.0%
AGGATGACCAACTGCTGGTG+GGG + Chr3:7939468-7939487 MsG0380011918.01.T01:CDS 55.0%
GAGAAAACCCCACCAGCAGT+TGG - Chr3:7939478-7939497 None:intergenic 55.0%
GAGGATGACCAACTGCTGGT+GGG + Chr3:7939467-7939486 MsG0380011918.01.T01:CDS 55.0%
GTTGACCTTGGGTGTGGTGA+GGG + Chr3:7939277-7939296 MsG0380011918.01.T01:CDS 55.0%
TGAGGATGACCAACTGCTGG+TGG + Chr3:7939466-7939485 MsG0380011918.01.T01:CDS 55.0%
CGTTGACCTTGGGTGTGGTG+AGG + Chr3:7939276-7939295 MsG0380011918.01.T01:CDS 60.0%
GCAATCCCTCACCACACCCA+AGG - Chr3:7939285-7939304 None:intergenic 60.0%
Chromosome Type Strat End Strand Name
Chr3 gene 7938915 7939628 7938915 ID=MsG0380011918.01;Name=MsG0380011918.01
Chr3 mRNA 7938915 7939628 7938915 ID=MsG0380011918.01.T01;Parent=MsG0380011918.01;Name=MsG0380011918.01.T01;_AED=0.49;_eAED=0.49;_QI=0|-1|0|1|-1|1|1|0|237
Chr3 exon 7938915 7939628 7938915 ID=MsG0380011918.01.T01:exon:3335;Parent=MsG0380011918.01.T01
Chr3 CDS 7938915 7939628 7938915 ID=MsG0380011918.01.T01:cds;Parent=MsG0380011918.01.T01
Gene Sequence

>MsG0380011918.01.T01

ATGGCATCTTTTGTTGCGTGGTGGTTAATGTCGGTTCTTTTTTTCTGTGGAAAGTTTAAGTTATTGCCTCCTTTGGATAATGCTTTTCTTCATATAAGCTTTGGCTATGATCATTTCATTGATGATTATAAGGTCATTCTTCTTTCTGACAAAAATGAAGTTTTTGTTTATACTTTGGGGACTGATTATTGGACAAGAATACAGGACATCCCATATTCTGACCTCATTTGTGGACAGGGAGTATTTGTTAGTGGCACTGTTAATTGGTTGGCATTTGATGATTCACATATTCTTTCTCTTGATTTAGAGAAGGAGTCATATCAACAACTTTTCCTACCTGATTTCAAGAATGAGAATGATACGTTGACCTTGGGTGTGGTGAGGGATTGCTTGTGTGTTTTTGCAGGTATTGATAGGATTGTCAATGTTTGGATTATGAAGGAGTATGGAAATCGTGAGTCTTGGACTAAATTGTATAGTGTTCCTAACATGCAAGATCGGGGTTTAGACGCCTATGAAGATCTCGAACCCTATACTGTTTCATATATTTCTGAGGATGACCAACTGCTGGTGGGGTTTTCTCATTTTCGAAGTCGCATTGAGAAGTTGGTTGTTTATGATTCCAAGACTGATACTTTGAATATTCCAGAGTTTGAAAACAACTCTGAACCGATATACTCAAAAGTCTACATTGAGAGTTTGATATCACCTTAA
Protein sequence

>MsG0380011918.01.T01

MASFVAWWLMSVLFFCGKFKLLPPLDNAFLHISFGYDHFIDDYKVILLSDKNEVFVYTLGTDYWTRIQDIPYSDLICGQGVFVSGTVNWLAFDDSHILSLDLEKESYQQLFLPDFKNENDTLTLGVVRDCLCVFAGIDRIVNVWIMKEYGNRESWTKLYSVPNMQDRGLDAYEDLEPYTVSYISEDDQLLVGFSHFRSRIEKLVVYDSKTDTLNIPEFENNSEPIYSKVYIESLISP*