AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0680032469.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0680032469.01.T01 MTR_7g050520 91.241 274 22 1 1 272 15 288 0.0 509
MsG0680032469.01.T01 MTR_7g050480 90.876 274 23 1 1 272 15 288 1.14e-180 503
MsG0680032469.01.T01 MTR_7g050490 92.021 188 15 0 1 188 1 188 4.22e-126 356
MsG0680032469.01.T01 MTR_7g052150 65.108 278 87 8 2 272 17 291 4.12e-114 334
MsG0680032469.01.T01 MTR_7g060940 56.446 287 104 6 1 272 15 295 3.58e-103 306
MsG0680032469.01.T01 MTR_7g055987 51.087 276 121 7 3 272 15 282 2.50e-82 252
MsG0680032469.01.T01 MTR_7g060960 55.235 277 86 9 2 272 26 270 4.85e-82 251
MsG0680032469.01.T01 MTR_1g442850 50.530 283 114 9 7 272 4 277 6.37e-81 248
MsG0680032469.01.T01 MTR_7g061090 47.619 294 130 8 2 272 15 307 2.71e-79 245
MsG0680032469.01.T01 MTR_4g033495 49.660 294 114 12 2 272 22 304 1.71e-77 242
MsG0680032469.01.T01 MTR_7g061010 52.857 280 119 8 1 272 15 289 6.56e-77 239
MsG0680032469.01.T01 MTR_7g061060 48.410 283 131 6 2 272 7 286 1.10e-76 238
MsG0680032469.01.T01 MTR_7g056737 48.387 279 122 9 6 272 20 288 2.92e-76 238
MsG0680032469.01.T01 MTR_7g061050 48.043 281 130 5 2 271 7 282 4.66e-75 234
MsG0680032469.01.T01 MTR_5g011350 54.086 257 94 10 20 272 1 237 5.92e-75 229
MsG0680032469.01.T01 MTR_7g091630 45.890 292 129 8 5 272 29 315 2.13e-73 231
MsG0680032469.01.T01 MTR_7g091640 46.713 289 127 7 5 272 32 314 5.51e-73 228
MsG0680032469.01.T01 MTR_7g056290 44.108 297 133 9 3 272 17 307 6.88e-73 229
MsG0680032469.01.T01 MTR_7g056717 46.953 279 130 8 4 272 18 288 1.15e-72 228
MsG0680032469.01.T01 MTR_7g056390 44.295 298 133 9 2 272 12 303 4.29e-72 227
MsG0680032469.01.T01 MTR_2g043410 44.828 290 130 9 6 272 20 302 4.73e-71 224
MsG0680032469.01.T01 MTR_2g043400 44.558 294 135 8 1 272 16 303 7.23e-70 221
MsG0680032469.01.T01 MTR_3g437520 43.934 305 134 8 2 272 17 318 7.98e-69 220
MsG0680032469.01.T01 MTR_7g077070 42.395 309 135 10 1 272 9 311 8.28e-69 219
MsG0680032469.01.T01 MTR_4g013180 44.369 293 131 9 3 272 6 289 9.92e-68 218
MsG0680032469.01.T01 MTR_7g056003 46.367 289 128 11 5 272 12 294 1.35e-67 215
MsG0680032469.01.T01 MTR_7g057270 44.178 292 129 10 8 272 26 310 3.30e-67 214
MsG0680032469.01.T01 MTR_3g072470 43.098 297 137 9 2 272 13 303 9.62e-66 211
MsG0680032469.01.T01 MTR_7g056260 43.624 298 124 10 2 272 8 288 2.36e-65 207
MsG0680032469.01.T01 MTR_8g066440 42.424 297 138 9 2 271 18 308 1.08e-64 207
MsG0680032469.01.T01 MTR_7g066850 45.993 287 127 9 1 271 16 290 1.78e-64 209
MsG0680032469.01.T01 MTR_0464s0020 43.689 309 126 11 2 272 17 315 3.51e-64 207
MsG0680032469.01.T01 MTR_7g066840 45.804 286 131 10 2 271 17 294 4.54e-64 206
MsG0680032469.01.T01 MTR_4g129190 45.296 287 131 9 6 272 4 284 5.16e-64 206
MsG0680032469.01.T01 MTR_2g047892 44.014 284 141 8 3 272 18 297 7.19e-64 205
MsG0680032469.01.T01 MTR_6g055210 44.407 295 126 12 7 272 21 306 7.32e-64 207
MsG0680032469.01.T01 MTR_7g056710 45.583 283 131 11 4 272 10 283 1.07e-63 204
MsG0680032469.01.T01 MTR_0128s0010 42.808 292 133 9 2 271 15 294 1.33e-63 205
MsG0680032469.01.T01 MTR_5g069760 45.423 284 123 11 6 272 4 272 1.80e-63 204
MsG0680032469.01.T01 MTR_7g022600 41.503 306 136 10 4 272 19 318 4.25e-63 204
MsG0680032469.01.T01 MTR_0128s0020 44.518 301 108 10 4 270 14 289 5.76e-63 203
MsG0680032469.01.T01 MTR_7g078840 41.824 318 134 9 1 272 3 315 1.79e-61 200
MsG0680032469.01.T01 MTR_5g069930 41.522 289 132 9 6 272 4 277 1.93e-61 199
MsG0680032469.01.T01 MTR_4g011660 41.311 305 140 10 2 271 13 313 3.49e-61 199
MsG0680032469.01.T01 MTR_7g055977 45.230 283 135 9 3 272 2 277 3.66e-61 198
MsG0680032469.01.T01 MTR_7g056760 40.803 299 134 10 3 271 18 303 1.29e-60 197
MsG0680032469.01.T01 MTR_7g445750 40.777 309 132 9 2 272 17 312 1.51e-60 195
MsG0680032469.01.T01 MTR_7g062060 40.645 310 124 10 7 272 11 304 2.28e-60 196
MsG0680032469.01.T01 MTR_7g056570 45.878 279 133 7 4 272 14 284 3.13e-60 197
MsG0680032469.01.T01 MTR_0128s0070 43.434 297 116 10 4 270 18 292 4.78e-60 196
MsG0680032469.01.T01 MTR_4g013185 40.850 306 136 10 7 272 9 309 4.84e-60 196
MsG0680032469.01.T01 MTR_1g088120 41.554 296 138 10 6 272 8 297 4.90e-60 196
MsG0680032469.01.T01 MTR_5g096710 45.205 292 117 12 4 269 19 293 1.16e-59 194
MsG0680032469.01.T01 MTR_7g056503 41.497 294 129 8 7 272 20 298 2.60e-59 194
MsG0680032469.01.T01 MTR_4g034860 42.481 266 120 9 35 272 49 309 5.68e-59 193
MsG0680032469.01.T01 MTR_4g013175 42.997 307 130 10 6 272 8 309 8.18e-59 193
MsG0680032469.01.T01 MTR_7g079160 41.104 326 132 15 1 272 1 320 1.26e-58 194
MsG0680032469.01.T01 MTR_2g010920 39.735 302 139 9 11 272 23 321 3.88e-58 191
MsG0680032469.01.T01 MTR_3g464500 40.614 293 137 11 3 272 22 300 5.45e-58 190
MsG0680032469.01.T01 MTR_7g056797 42.230 296 132 9 3 271 18 301 6.00e-58 190
MsG0680032469.01.T01 MTR_7g028660 41.892 296 136 11 1 271 1 285 1.08e-57 189
MsG0680032469.01.T01 MTR_1g071010 41.216 296 134 10 1 271 9 289 2.81e-57 188
MsG0680032469.01.T01 MTR_0707s0020 40.000 340 121 12 2 272 20 345 3.40e-57 189
MsG0680032469.01.T01 MTR_2g010950 42.509 287 132 10 11 272 23 301 3.55e-57 188
MsG0680032469.01.T01 MTR_3g464470 38.889 288 146 8 3 272 2 277 3.75e-57 187
MsG0680032469.01.T01 MTR_6g016285 42.761 297 131 10 6 272 19 306 8.19e-57 188
MsG0680032469.01.T01 MTR_0649s0020 41.379 290 138 11 4 271 8 287 8.23e-57 187
MsG0680032469.01.T01 MTR_7g078900 40.065 307 143 11 1 271 3 304 9.96e-57 187
MsG0680032469.01.T01 MTR_7g078040 41.290 310 128 11 6 270 7 307 1.50e-56 187
MsG0680032469.01.T01 MTR_6g086920 40.000 340 121 12 2 272 32 357 1.80e-56 189
MsG0680032469.01.T01 MTR_7g066030 40.850 306 132 11 1 271 14 305 2.90e-56 186
MsG0680032469.01.T01 MTR_0242s0060 40.268 298 135 10 6 270 7 294 4.16e-56 186
MsG0680032469.01.T01 MTR_0242s0040 40.268 298 135 10 6 270 7 294 4.16e-56 186
MsG0680032469.01.T01 MTR_2g047200 40.206 291 150 13 1 272 12 297 1.98e-55 183
MsG0680032469.01.T01 MTR_2g010900 41.912 272 127 9 26 272 1 266 2.54e-55 183
MsG0680032469.01.T01 MTR_7g056200 42.756 283 122 11 6 272 21 279 2.99e-55 182
MsG0680032469.01.T01 MTR_7g066100 39.672 305 132 12 5 272 8 297 4.40e-55 182
MsG0680032469.01.T01 MTR_7g055870 38.291 316 132 10 8 272 13 316 1.02e-54 182
MsG0680032469.01.T01 MTR_3g080370 42.500 280 124 9 22 272 35 306 4.26e-54 181
MsG0680032469.01.T01 MTR_7g061100 45.607 239 92 6 7 242 12 215 3.64e-53 176
MsG0680032469.01.T01 MTR_5g056020 41.026 312 137 11 2 272 11 316 3.87e-53 180
MsG0680032469.01.T01 MTR_6g092560 39.865 296 142 10 1 271 5 289 5.83e-53 178
MsG0680032469.01.T01 MTR_5g068040 42.657 286 127 12 3 272 12 276 6.62e-53 177
MsG0680032469.01.T01 MTR_7g055930 37.975 316 133 12 8 272 13 316 7.24e-53 177
MsG0680032469.01.T01 MTR_7g078860 41.414 297 131 12 7 272 8 292 9.14e-53 176
MsG0680032469.01.T01 MTR_7g037670 43.726 263 103 8 3 249 18 251 3.30e-52 173
MsG0680032469.01.T01 MTR_7g070830 39.159 309 136 13 8 272 21 321 1.06e-51 174
MsG0680032469.01.T01 MTR_7g077970 40.940 298 133 10 8 270 7 296 1.58e-51 174
MsG0680032469.01.T01 MTR_7g062100 41.754 285 131 11 8 271 24 294 2.08e-51 173
MsG0680032469.01.T01 MTR_7g066010 39.474 304 121 12 5 266 18 300 1.37e-50 170
MsG0680032469.01.T01 MTR_4g019990 40.816 294 134 12 7 271 5 287 1.41e-50 171
MsG0680032469.01.T01 MTR_0097s0030 40.206 291 133 12 5 272 11 283 1.91e-50 170
MsG0680032469.01.T01 MTR_2g047240 40.206 291 133 12 5 272 11 283 1.91e-50 170
MsG0680032469.01.T01 MTR_7g066000 38.206 301 137 11 4 272 21 304 2.31e-50 171
MsG0680032469.01.T01 MTR_4g024890 40.493 284 140 10 7 272 9 281 2.74e-50 170
MsG0680032469.01.T01 MTR_7g070880 38.835 309 137 13 8 272 21 321 3.83e-50 170
MsG0680032469.01.T01 MTR_2g047878 41.993 281 119 12 5 271 18 268 5.35e-50 169
MsG0680032469.01.T01 MTR_5g043160 37.377 305 144 7 10 272 52 351 2.49e-49 169
MsG0680032469.01.T01 MTR_6g017280 40.345 290 138 10 6 272 7 284 2.64e-49 167
MsG0680032469.01.T01 MTR_4g030110 39.860 286 143 11 2 264 24 303 5.02e-49 166
MsG0680032469.01.T01 MTR_4g030980 35.256 312 152 11 8 271 15 324 5.98e-49 167
MsG0680032469.01.T01 MTR_1g047490 38.542 288 125 8 6 272 20 276 6.14e-49 164
MsG0680032469.01.T01 MTR_4g030830 39.655 290 140 10 8 272 9 288 8.44e-49 166
MsG0680032469.01.T01 MTR_4g031020 35.016 317 156 10 3 271 10 324 1.03e-48 167
MsG0680032469.01.T01 MTR_7g035295 39.437 284 129 11 6 272 14 271 1.99e-48 165
MsG0680032469.01.T01 MTR_7g077990 40.893 291 131 14 6 272 15 288 8.43e-48 164
MsG0680032469.01.T01 MTR_4g129160 39.344 305 135 11 8 272 7 301 8.53e-48 163
MsG0680032469.01.T01 MTR_4g008790 40.514 311 125 13 6 272 37 331 1.65e-47 164
MsG0680032469.01.T01 MTR_7g078940 38.889 306 131 13 6 261 30 329 7.86e-47 161
MsG0680032469.01.T01 MTR_7g056023 39.716 282 116 12 3 272 25 264 8.57e-47 158
MsG0680032469.01.T01 MTR_4g030090 38.889 288 141 11 8 271 14 290 4.54e-46 159
MsG0680032469.01.T01 MTR_7g056170 36.624 314 126 13 6 259 73 373 1.48e-45 159
MsG0680032469.01.T01 MTR_2g461450 38.732 284 131 12 2 271 12 266 2.51e-44 154
MsG0680032469.01.T01 MTR_7g052670 39.937 318 140 16 2 272 15 328 6.12e-44 154
MsG0680032469.01.T01 MTR_7g445890 38.983 295 119 11 6 272 14 275 9.41e-44 153
MsG0680032469.01.T01 MTR_7g056820 37.367 281 150 9 8 271 7 278 1.08e-43 152
MsG0680032469.01.T01 MTR_7g113500 41.951 205 97 7 89 272 75 278 9.99e-43 150
MsG0680032469.01.T01 MTR_6g065510 51.515 165 67 6 120 272 65 228 2.80e-42 147
MsG0680032469.01.T01 MTR_6g065510 63.265 49 18 0 3 51 18 66 3.74e-13 68.9
MsG0680032469.01.T01 MTR_7g077910 42.478 226 96 9 70 272 6 220 5.76e-41 144
MsG0680032469.01.T01 MTR_4g030790 36.082 291 114 9 3 271 14 254 7.37e-41 144
MsG0680032469.01.T01 MTR_7g066060 36.735 294 148 11 7 272 22 305 7.94e-41 147
MsG0680032469.01.T01 MTR_2g027820 39.759 249 94 6 26 271 1 196 5.83e-40 140
MsG0680032469.01.T01 MTR_7g022670 34.276 283 118 9 4 272 19 247 9.31e-40 141
MsG0680032469.01.T01 MTR_7g066080 38.206 301 146 12 1 272 9 298 1.18e-39 143
MsG0680032469.01.T01 MTR_6g017270 42.233 206 100 6 4 193 5 207 1.32e-39 141
MsG0680032469.01.T01 MTR_2g006360 37.809 283 102 12 2 272 41 261 1.52e-38 139
MsG0680032469.01.T01 MTR_4g037465 35.836 293 149 13 2 271 16 292 2.53e-38 139
MsG0680032469.01.T01 MTR_3g013470 37.153 288 125 9 14 272 1 261 4.14e-38 137
MsG0680032469.01.T01 MTR_6g017295 44.053 227 96 10 68 272 7 224 5.28e-38 140
MsG0680032469.01.T01 MTR_1g029650 36.577 298 144 13 3 272 4 284 7.42e-38 137
MsG0680032469.01.T01 MTR_7g021580 42.105 209 95 6 7 212 32 217 1.15e-37 135
MsG0680032469.01.T01 MTR_2g437110 42.149 242 101 10 6 212 20 257 4.08e-37 137
MsG0680032469.01.T01 MTR_2g047895 40.845 213 102 8 83 271 10 222 4.67e-36 131
MsG0680032469.01.T01 MTR_6g042600 34.307 274 93 7 2 272 30 219 8.00e-36 132
MsG0680032469.01.T01 MTR_4g024870 36.220 254 135 7 9 242 45 291 1.05e-33 127
MsG0680032469.01.T01 MTR_1g015730 37.000 300 123 15 7 272 8 275 1.63e-33 126
MsG0680032469.01.T01 MTR_7g009265 41.818 220 104 8 72 272 1 215 7.00e-33 123
MsG0680032469.01.T01 MTR_7g070440 35.017 297 144 13 3 272 2 276 1.03e-32 123
MsG0680032469.01.T01 MTR_2g021150 34.932 292 144 13 1 270 7 274 1.26e-32 123
MsG0680032469.01.T01 MTR_7g078050 47.222 144 68 4 6 148 4 140 1.95e-32 120
MsG0680032469.01.T01 MTR_8g101940 38.521 257 133 12 8 247 2 250 2.90e-32 122
MsG0680032469.01.T01 MTR_7g066830 44.706 170 85 6 28 192 15 180 7.20e-32 116
MsG0680032469.01.T01 MTR_7g078960 41.398 186 67 8 114 273 1 170 1.16e-31 119
MsG0680032469.01.T01 MTR_4g030760 34.028 288 138 11 5 272 70 325 2.89e-31 120
MsG0680032469.01.T01 MTR_7g006360 40.526 190 61 6 9 193 10 152 3.63e-31 117
MsG0680032469.01.T01 MTR_4g061340 33.446 296 143 9 2 269 20 289 2.84e-30 117
MsG0680032469.01.T01 MTR_7g055953 45.181 166 67 6 117 272 60 211 3.51e-30 115
MsG0680032469.01.T01 MTR_3g013950 33.221 298 158 14 3 271 2 287 4.04e-30 117
MsG0680032469.01.T01 MTR_0267s0050 33.333 288 154 13 11 271 9 285 1.03e-29 115
MsG0680032469.01.T01 MTR_2g046920 34.164 281 142 14 7 270 23 277 1.81e-29 114
MsG0680032469.01.T01 MTR_6g088385 46.429 168 66 7 128 272 54 220 2.90e-29 113
MsG0680032469.01.T01 MTR_1g112010 34.137 249 123 8 34 270 6 225 2.96e-29 113
MsG0680032469.01.T01 MTR_7g055830 38.462 182 79 5 123 272 68 248 6.18e-29 113
MsG0680032469.01.T01 MTR_7g056727 49.630 135 52 5 48 171 3 132 7.33e-29 110
MsG0680032469.01.T01 MTR_8g069515 42.763 152 69 5 8 146 16 162 1.03e-28 108
MsG0680032469.01.T01 MTR_7g056723 44.604 139 68 4 89 219 18 155 3.25e-28 106
MsG0680032469.01.T01 MTR_3g009240 32.394 284 147 11 8 272 36 293 4.49e-28 111
MsG0680032469.01.T01 MTR_6g017305 40.462 173 80 5 119 272 5 173 5.97e-28 108
MsG0680032469.01.T01 MTR_7g055850 34.928 209 89 6 1 173 6 203 6.17e-28 108
MsG0680032469.01.T01 MTR_1g094210 30.986 284 151 11 2 270 52 305 1.02e-27 110
MsG0680032469.01.T01 MTR_2g046800 30.000 300 153 11 4 264 10 291 1.11e-27 110
MsG0680032469.01.T01 MTR_1g094210 30.986 284 151 11 2 270 52 305 1.19e-27 110
MsG0680032469.01.T01 MTR_2g021190 34.495 287 136 14 8 270 21 279 1.63e-27 109
MsG0680032469.01.T01 MTR_5g057710 30.769 286 155 9 8 273 46 308 2.21e-27 109
MsG0680032469.01.T01 MTR_3g007360 33.333 285 137 12 11 269 55 312 5.28e-27 108
MsG0680032469.01.T01 MTR_3g007410 32.509 283 142 11 11 269 55 312 1.46e-26 107
MsG0680032469.01.T01 MTR_7g078880 31.818 264 98 8 4 256 5 197 1.75e-26 107
MsG0680032469.01.T01 MTR_3g007330 33.779 299 136 11 2 270 36 302 2.29e-26 106
MsG0680032469.01.T01 MTR_1g015740 31.690 284 111 9 3 272 4 218 3.23e-26 105
MsG0680032469.01.T01 MTR_5g058620 40.127 157 73 5 134 272 11 164 9.61e-26 103
MsG0680032469.01.T01 MTR_1g058870 40.127 157 73 5 134 272 11 164 9.61e-26 103
MsG0680032469.01.T01 MTR_2g029990 34.043 282 142 13 9 270 52 309 9.74e-26 105
MsG0680032469.01.T01 MTR_4g053510 47.788 113 53 2 5 115 19 127 9.79e-26 99.0
MsG0680032469.01.T01 MTR_4g006840 33.750 240 132 10 11 246 2 218 1.32e-25 101
MsG0680032469.01.T01 MTR_1g097560 29.893 281 156 13 4 272 32 283 3.24e-25 103
MsG0680032469.01.T01 MTR_2g021155 29.856 278 155 8 11 271 39 293 5.36e-25 104
MsG0680032469.01.T01 MTR_7g061012 46.565 131 41 4 38 167 4 106 7.48e-25 97.8
MsG0680032469.01.T01 MTR_2g047832 32.082 293 152 14 7 270 28 302 1.41e-24 102
MsG0680032469.01.T01 MTR_3g007270 31.494 308 151 14 2 273 40 323 3.68e-24 100
MsG0680032469.01.T01 MTR_2g046830 32.028 281 148 12 7 270 24 278 5.19e-24 100
MsG0680032469.01.T01 MTR_6g460450 48.696 115 55 2 6 118 27 139 5.52e-24 94.7
MsG0680032469.01.T01 MTR_4g006350 27.797 295 180 11 1 271 487 772 1.32e-23 100
MsG0680032469.01.T01 MTR_7g030040 33.808 281 109 9 2 272 51 264 1.37e-23 98.2
MsG0680032469.01.T01 MTR_6g065980 31.119 286 140 12 3 270 11 257 1.99e-23 98.2
MsG0680032469.01.T01 MTR_3g036290 30.175 285 148 11 2 269 16 266 2.79e-23 97.8
MsG0680032469.01.T01 MTR_3g007430 32.404 287 144 11 11 273 46 306 2.92e-23 98.2
MsG0680032469.01.T01 MTR_5g057790 29.371 286 155 9 8 271 46 306 3.38e-23 98.2
MsG0680032469.01.T01 MTR_4g128320 39.355 155 75 6 123 260 37 189 3.62e-23 95.9
MsG0680032469.01.T01 MTR_3g006530 32.963 270 141 13 3 249 30 282 5.53e-23 97.4
MsG0680032469.01.T01 MTR_3g006670 29.355 310 139 11 2 271 43 312 1.03e-22 96.7
MsG0680032469.01.T01 MTR_8g467140 28.571 287 157 12 6 272 30 288 1.18e-22 95.5
MsG0680032469.01.T01 MTR_6g053260 32.180 289 140 14 8 270 337 595 1.33e-22 97.4
MsG0680032469.01.T01 MTR_2g055970 27.491 291 157 14 5 272 208 467 1.42e-22 97.4
MsG0680032469.01.T01 MTR_2g079810 31.227 269 141 10 1 248 1 246 1.61e-22 94.7
MsG0680032469.01.T01 MTR_5g069950 38.650 163 75 6 117 272 23 167 1.66e-22 92.8
MsG0680032469.01.T01 MTR_2g043420 40.909 132 69 3 6 133 24 150 2.31e-22 90.9
MsG0680032469.01.T01 MTR_2g046900 29.293 297 143 12 7 270 27 289 2.50e-22 95.5
MsG0680032469.01.T01 MTR_5g046300 29.225 284 147 11 8 270 4 254 3.34e-22 94.7
MsG0680032469.01.T01 MTR_5g046290 29.225 284 147 11 8 270 4 254 3.34e-22 94.7
MsG0680032469.01.T01 MTR_4g024910 41.497 147 75 5 26 169 1 139 3.36e-22 94.4
MsG0680032469.01.T01 MTR_3g011060 30.263 304 156 13 2 273 22 301 3.74e-22 95.1
MsG0680032469.01.T01 MTR_1g054725 30.847 295 153 14 1 270 13 281 4.03e-22 94.7
MsG0680032469.01.T01 MTR_3g058480 32.847 274 122 13 8 249 39 282 4.89e-22 94.0
MsG0680032469.01.T01 MTR_3g009260 30.241 291 147 12 4 272 39 295 5.97e-22 94.4
MsG0680032469.01.T01 MTR_8g101580 28.125 288 161 11 2 270 39 299 6.57e-22 94.4
MsG0680032469.01.T01 MTR_1g050542 29.391 279 151 11 7 270 57 304 6.80e-22 94.4
MsG0680032469.01.T01 MTR_7g022580 43.697 119 53 4 48 160 2 112 7.51e-22 89.7
MsG0680032469.01.T01 MTR_7g056173 40.909 132 62 4 157 272 29 160 8.50e-22 93.2
MsG0680032469.01.T01 MTR_8g030660 32.627 236 103 9 5 193 24 250 1.09e-21 92.0
MsG0680032469.01.T01 MTR_1g097490 28.826 281 155 10 8 271 49 301 1.30e-21 93.6
MsG0680032469.01.T01 MTR_7g407070 31.046 306 149 12 4 272 28 308 1.33e-21 93.6
MsG0680032469.01.T01 MTR_5g011200 31.399 293 148 12 3 270 12 276 1.60e-21 93.2
MsG0680032469.01.T01 MTR_0044s0300 31.673 281 148 13 8 271 38 291 1.62e-21 93.2
MsG0680032469.01.T01 MTR_3g010390 31.000 300 148 12 4 270 29 302 1.63e-21 93.2
MsG0680032469.01.T01 MTR_3g030350 33.099 284 150 13 4 273 31 288 1.83e-21 93.2
MsG0680032469.01.T01 MTR_7g066040 37.705 183 81 9 93 245 13 192 2.20e-21 90.5
MsG0680032469.01.T01 MTR_3g011020 30.132 302 141 15 2 273 22 283 2.55e-21 92.4
MsG0680032469.01.T01 MTR_8g073550 32.212 208 109 8 2 191 24 217 3.59e-21 89.7
MsG0680032469.01.T01 MTR_1g054575 27.817 284 156 12 8 273 52 304 4.16e-21 93.2
MsG0680032469.01.T01 MTR_4g063955 37.222 180 89 6 7 173 26 194 5.27e-21 90.1
MsG0680032469.01.T01 MTR_8g062660 33.061 245 110 11 7 213 21 249 5.84e-21 92.8
MsG0680032469.01.T01 MTR_3g014540 31.469 286 148 16 8 270 29 289 6.05e-21 91.7
MsG0680032469.01.T01 MTR_3g013740 30.952 294 152 16 8 270 44 317 7.02e-21 91.7
MsG0680032469.01.T01 MTR_7g007300 32.364 275 152 14 4 270 99 347 8.68e-21 91.7
MsG0680032469.01.T01 MTR_3g024110 30.526 285 155 11 2 273 95 349 8.77e-21 91.7
MsG0680032469.01.T01 MTR_3g011100 32.646 291 149 12 4 269 231 499 1.29e-20 91.7
MsG0680032469.01.T01 MTR_1g112930 33.716 261 133 13 8 251 25 262 1.38e-20 90.5
MsG0680032469.01.T01 MTR_7g070937 46.094 128 48 6 153 260 10 136 1.57e-20 86.3
MsG0680032469.01.T01 MTR_3g006570 30.333 300 138 13 3 270 16 276 1.57e-20 90.5
MsG0680032469.01.T01 MTR_3g030330 30.657 274 153 10 8 270 20 267 1.77e-20 90.1
MsG0680032469.01.T01 MTR_3g036335 29.492 295 150 10 2 270 35 297 2.04e-20 90.1
MsG0680032469.01.T01 MTR_5g057040 32.995 197 105 6 8 189 46 230 2.49e-20 90.9
MsG0680032469.01.T01 MTR_3g010920 31.985 272 142 11 8 270 44 281 3.73e-20 89.4
MsG0680032469.01.T01 MTR_0064s0060 42.105 114 59 3 4 114 13 122 4.47e-20 84.3
MsG0680032469.01.T01 MTR_5g057643 31.343 201 103 6 8 189 46 230 5.24e-20 87.4
MsG0680032469.01.T01 MTR_1g056710 32.584 267 125 11 4 245 30 266 5.94e-20 89.0
MsG0680032469.01.T01 MTR_3g010870 32.432 259 138 12 4 249 33 267 7.29e-20 88.6
MsG0680032469.01.T01 MTR_3g010590 32.246 276 141 11 8 270 39 281 7.64e-20 88.6
MsG0680032469.01.T01 MTR_6g007135 29.553 291 152 11 8 270 26 291 8.68e-20 88.2
MsG0680032469.01.T01 MTR_3g014570 28.425 292 157 11 4 270 25 289 9.56e-20 88.2
MsG0680032469.01.T01 MTR_7g034310 46.721 122 59 4 155 272 17 136 1.85e-19 85.1
MsG0680032469.01.T01 MTR_4g053470 29.643 280 121 10 5 260 19 246 2.11e-19 86.7
MsG0680032469.01.T01 MTR_1g046600 37.500 168 64 9 28 169 70 222 2.39e-19 86.3
MsG0680032469.01.T01 MTR_3g024150 32.384 281 138 14 11 270 38 287 2.47e-19 87.0
MsG0680032469.01.T01 MTR_2g060555 37.576 165 67 6 127 272 45 192 2.47e-19 85.9
MsG0680032469.01.T01 MTR_5g057020 28.520 277 158 8 8 273 46 293 2.63e-19 86.7
MsG0680032469.01.T01 MTR_4g023120 31.696 224 120 8 8 213 3 211 2.99e-19 86.7
MsG0680032469.01.T01 MTR_3g009310 30.216 278 160 10 8 266 42 304 3.34e-19 86.7
MsG0680032469.01.T01 MTR_5g007610 32.270 282 132 12 8 255 41 297 3.43e-19 86.7
MsG0680032469.01.T01 MTR_0760s0010 32.482 274 137 12 13 270 52 293 3.48e-19 86.7
MsG0680032469.01.T01 MTR_4g023070 31.696 224 120 8 8 213 3 211 4.66e-19 86.3
MsG0680032469.01.T01 MTR_6g027910 31.164 292 149 16 11 269 12 284 5.45e-19 85.9
MsG0680032469.01.T01 MTR_4g107820 27.027 259 150 9 1 245 29 262 5.78e-19 85.9
MsG0680032469.01.T01 MTR_4g107780 27.027 259 150 9 1 245 29 262 5.78e-19 85.9
MsG0680032469.01.T01 MTR_4g107820 27.027 259 150 9 1 245 29 262 7.07e-19 85.9
MsG0680032469.01.T01 MTR_4g107780 27.027 259 150 9 1 245 29 262 7.94e-19 85.9
MsG0680032469.01.T01 MTR_2g078900 29.960 247 148 8 4 238 29 262 9.75e-19 85.1
MsG0680032469.01.T01 MTR_5g057690 27.500 280 158 7 8 271 46 296 1.63e-18 84.7
MsG0680032469.01.T01 MTR_3g030250 29.032 279 148 10 8 270 37 281 1.85e-18 84.3
MsG0680032469.01.T01 MTR_3g030310 29.553 291 147 15 8 270 21 281 1.90e-18 84.7
MsG0680032469.01.T01 MTR_7g070900 45.161 124 47 5 152 255 234 356 2.03e-18 84.7
MsG0680032469.01.T01 MTR_7g070900 31.250 176 73 3 3 169 10 146 1.59e-16 79.3
MsG0680032469.01.T01 MTR_3g011650 31.140 228 115 8 4 212 77 281 2.30e-18 83.2
MsG0680032469.01.T01 MTR_3g013770 29.553 291 152 12 8 270 33 298 2.64e-18 84.3
MsG0680032469.01.T01 MTR_3g436150 29.836 305 152 12 2 272 26 302 3.02e-18 84.0
MsG0680032469.01.T01 MTR_4g031770 31.507 292 136 17 8 270 4 260 3.98e-18 83.6
MsG0680032469.01.T01 MTR_2g017720 41.732 127 67 4 152 272 76 201 4.84e-18 83.6
MsG0680032469.01.T01 MTR_5g022420 25.623 281 166 11 2 270 21 270 5.86e-18 83.2
MsG0680032469.01.T01 MTR_7g058660 50.602 83 38 1 89 168 1 83 6.25e-18 80.5
MsG0680032469.01.T01 MTR_4g108820 29.500 200 83 5 7 192 41 196 6.33e-18 82.4
MsG0680032469.01.T01 MTR_3g009290 32.061 262 130 13 1 245 27 257 7.33e-18 81.3
MsG0680032469.01.T01 MTR_3g010870 31.336 217 129 8 4 211 33 238 8.96e-18 82.0
MsG0680032469.01.T01 MTR_3g006500 30.325 277 153 11 8 269 17 268 9.89e-18 82.4
MsG0680032469.01.T01 MTR_6g053240 29.110 292 150 13 8 270 28 291 1.00e-17 82.4
MsG0680032469.01.T01 MTR_3g023930 32.669 251 128 11 8 249 34 252 1.42e-17 82.0
MsG0680032469.01.T01 MTR_4g023080 30.594 219 127 8 5 213 6 209 1.61e-17 81.6
MsG0680032469.01.T01 MTR_3g010970 30.657 274 143 11 11 270 51 291 1.61e-17 82.0
MsG0680032469.01.T01 MTR_4g020000 40.000 135 62 6 153 271 111 242 2.64e-17 80.9
MsG0680032469.01.T01 MTR_2g021252 30.928 291 127 15 11 273 50 294 2.76e-17 81.3
MsG0680032469.01.T01 MTR_3g083640 30.196 255 156 7 2 249 49 288 3.06e-17 81.3
MsG0680032469.01.T01 MTR_3g058470 35.610 205 101 8 8 189 37 233 4.05e-17 80.5
MsG0680032469.01.T01 MTR_3g034130 31.401 207 102 6 6 189 7 196 4.89e-17 80.5
MsG0680032469.01.T01 MTR_5g046260 27.823 248 119 9 8 233 4 213 4.89e-17 79.7
MsG0680032469.01.T01 MTR_3g009250 30.568 229 116 9 4 213 39 243 9.71e-17 77.8
MsG0680032469.01.T01 MTR_1g097330 29.231 260 135 14 8 248 16 245 1.23e-16 79.3
MsG0680032469.01.T01 MTR_5g070380 38.261 115 57 4 35 142 43 150 1.31e-16 76.3
MsG0680032469.01.T01 MTR_3g103020 30.116 259 144 10 1 238 13 255 1.32e-16 79.3
MsG0680032469.01.T01 MTR_4g089125 42.708 96 42 3 1 89 1 90 1.33e-16 73.6
MsG0680032469.01.T01 MTR_1g055070 28.358 268 143 9 4 241 45 293 1.54e-16 79.0
MsG0680032469.01.T01 MTR_4g021785 32.653 196 98 8 6 188 7 181 1.78e-16 78.6
MsG0680032469.01.T01 MTR_5g009060 31.908 304 149 18 8 270 25 311 1.88e-16 79.0
MsG0680032469.01.T01 MTR_3g010520 31.295 278 141 13 8 273 25 264 2.39e-16 78.2
MsG0680032469.01.T01 MTR_4g023440 29.339 242 148 7 7 235 17 248 3.51e-16 77.4
MsG0680032469.01.T01 MTR_7g013590 29.553 291 148 13 11 274 39 299 3.51e-16 78.2
MsG0680032469.01.T01 MTR_5g070080 29.134 254 115 10 6 215 8 240 4.97e-16 77.4
MsG0680032469.01.T01 MTR_3g034180 31.132 212 96 8 6 189 121 310 5.74e-16 77.8
MsG0680032469.01.T01 MTR_1g055375 29.537 281 157 12 11 270 7 267 8.95e-16 76.6
MsG0680032469.01.T01 MTR_6g021880 30.741 270 152 10 20 269 32 286 9.42e-16 76.6
MsG0680032469.01.T01 MTR_3g034160 29.767 215 111 8 6 202 7 199 1.83e-15 75.9
MsG0680032469.01.T01 MTR_7g091610 50.000 74 35 1 201 272 70 143 2.08e-15 74.3
MsG0680032469.01.T01 MTR_3g007300 28.571 273 151 10 4 271 45 278 2.51e-15 75.5
MsG0680032469.01.T01 MTR_7g061940 43.200 125 50 6 156 270 78 191 3.19e-15 73.9
MsG0680032469.01.T01 MTR_1g055055 30.645 248 129 13 8 245 26 240 3.93e-15 74.7
MsG0680032469.01.T01 MTR_2g021050 25.784 287 153 10 8 270 5 255 4.92e-15 74.7
MsG0680032469.01.T01 MTR_7g067680 27.798 277 154 10 4 270 45 285 5.14e-15 74.7
MsG0680032469.01.T01 MTR_4g121580 32.524 206 113 8 2 190 5 201 7.84e-15 73.9
MsG0680032469.01.T01 MTR_3g010430 27.152 302 156 12 3 271 31 301 8.93e-15 73.9
MsG0680032469.01.T01 MTR_7g060930 58.065 62 23 2 212 271 1 61 1.07e-14 68.2
MsG0680032469.01.T01 MTR_4g023090 32.338 201 107 8 7 192 15 201 1.21e-14 73.6
MsG0680032469.01.T01 MTR_3g036430 30.275 218 106 9 8 213 20 203 1.22e-14 73.2
MsG0680032469.01.T01 MTR_6g081280 38.211 123 60 5 148 255 11 132 1.56e-14 71.6
MsG0680032469.01.T01 MTR_3g010620 28.767 292 145 12 1 270 26 276 1.87e-14 73.2
MsG0680032469.01.T01 MTR_3g024040 27.881 269 150 9 15 270 38 275 1.88e-14 72.8
MsG0680032469.01.T01 MTR_4g117850 31.295 278 128 15 8 257 23 265 1.91e-14 72.8
MsG0680032469.01.T01 MTR_4g013190 36.290 124 53 5 45 147 1 119 2.33e-14 68.6
MsG0680032469.01.T01 MTR_3g010440 33.333 138 84 3 4 141 22 151 3.42e-14 72.0
MsG0680032469.01.T01 MTR_6g004660 26.207 290 169 11 7 270 15 285 3.74e-14 72.0
MsG0680032469.01.T01 MTR_8g013010 28.708 209 103 8 6 189 52 239 4.02e-14 71.6
MsG0680032469.01.T01 MTR_7g016930 25.758 264 143 9 7 246 15 249 4.26e-14 71.6
MsG0680032469.01.T01 MTR_1g100763 27.820 266 137 11 14 270 4 223 4.66e-14 71.2
MsG0680032469.01.T01 MTR_4g094365 30.952 210 102 10 1 189 1 188 5.07e-14 71.6
MsG0680032469.01.T01 MTR_3g007380 36.842 133 70 4 11 141 33 153 5.65e-14 70.1
MsG0680032469.01.T01 MTR_3g058440 33.990 203 104 10 8 189 35 228 6.16e-14 70.9
MsG0680032469.01.T01 MTR_1g115185 28.070 285 159 9 7 270 38 297 7.69e-14 71.2
MsG0680032469.01.T01 MTR_4g116330 26.471 272 140 11 7 252 22 259 7.93e-14 71.2
MsG0680032469.01.T01 MTR_4g116330 29.717 212 90 8 7 189 22 203 1.01e-13 70.5
MsG0680032469.01.T01 MTR_4g023150 30.876 217 128 8 5 215 7 207 1.27e-13 70.5
MsG0680032469.01.T01 MTR_4g109280 29.658 263 140 9 1 241 1 240 1.34e-13 70.5
MsG0680032469.01.T01 MTR_1g055135 34.731 167 90 7 7 169 12 163 1.46e-13 70.5
MsG0680032469.01.T01 MTR_8g433040 29.614 233 114 9 5 209 15 225 2.42e-13 69.7
MsG0680032469.01.T01 MTR_8g032380 29.614 233 114 9 5 209 15 225 2.42e-13 69.7
MsG0680032469.01.T01 MTR_7g077930 49.180 61 30 1 1 60 12 72 3.25e-13 64.7
MsG0680032469.01.T01 MTR_4g117780 33.014 209 99 10 1 189 1 188 3.25e-13 69.3
MsG0680032469.01.T01 MTR_5g023570 33.621 116 67 3 2 117 31 136 3.93e-13 65.9
MsG0680032469.01.T01 MTR_6g048120 28.146 302 161 14 2 273 30 305 4.76e-13 68.9
MsG0680032469.01.T01 MTR_7g056373 40.964 83 45 1 3 81 17 99 6.32e-13 64.7
MsG0680032469.01.T01 MTR_2g078850 30.137 292 134 15 11 271 33 285 7.25e-13 68.2
MsG0680032469.01.T01 MTR_1g115160 30.000 280 148 13 6 270 20 266 9.73e-13 67.8
MsG0680032469.01.T01 MTR_3g030240 28.571 224 119 8 8 213 40 240 1.03e-12 67.8
MsG0680032469.01.T01 MTR_4g116340 28.689 244 109 11 2 216 30 237 1.14e-12 66.6
MsG0680032469.01.T01 MTR_2g021210 28.837 215 99 10 2 192 80 264 1.18e-12 67.8
MsG0680032469.01.T01 MTR_3g096270 26.515 264 118 11 8 251 45 252 1.87e-12 66.2
MsG0680032469.01.T01 MTR_6g048140 29.213 267 137 13 8 249 39 278 2.11e-12 67.0
MsG0680032469.01.T01 MTR_2g048580 29.167 192 115 6 1 190 1 173 2.57e-12 66.6
MsG0680032469.01.T01 MTR_5g057200 34.711 121 66 2 21 137 43 154 3.12e-12 63.9
MsG0680032469.01.T01 MTR_5g010660 28.455 246 121 11 8 215 34 262 3.32e-12 66.6
MsG0680032469.01.T01 MTR_1g114700 30.932 236 136 11 2 220 23 248 3.76e-12 66.2
MsG0680032469.01.T01 MTR_4g133170 24.800 250 133 9 8 230 4 225 4.26e-12 65.9
MsG0680032469.01.T01 MTR_7g056560 56.667 60 22 2 198 255 124 181 4.42e-12 64.3
MsG0680032469.01.T01 MTR_4g023190 29.464 224 121 9 5 215 7 206 4.55e-12 65.9
MsG0680032469.01.T01 MTR_4g023380 31.963 219 115 11 7 214 15 210 5.44e-12 65.9
MsG0680032469.01.T01 MTR_8g032390 29.956 227 106 9 5 213 37 228 7.58e-12 65.1
MsG0680032469.01.T01 MTR_3g023940 26.471 272 177 11 8 270 34 291 1.07e-11 64.7
MsG0680032469.01.T01 MTR_5g070088 28.378 222 101 8 7 189 6 208 1.52e-11 64.3
MsG0680032469.01.T01 MTR_7g022590 59.184 49 18 1 94 140 2 50 2.34e-11 58.2
MsG0680032469.01.T01 MTR_4g109270 29.893 281 142 13 1 257 1 250 2.42e-11 63.5
MsG0680032469.01.T01 MTR_3g010450 30.653 199 97 7 15 193 4 181 2.73e-11 62.8
MsG0680032469.01.T01 MTR_5g094350 25.911 247 129 11 7 214 12 243 2.93e-11 62.8
MsG0680032469.01.T01 MTR_6g013270 27.458 295 150 13 7 270 28 289 3.10e-11 63.5
MsG0680032469.01.T01 MTR_8g099460 25.214 234 136 8 5 212 2 222 3.47e-11 63.2
MsG0680032469.01.T01 MTR_1g058760 53.846 52 22 1 3 52 4 55 3.60e-11 58.5
MsG0680032469.01.T01 MTR_7g017040 28.270 237 128 11 7 211 15 241 3.96e-11 63.2
MsG0680032469.01.T01 MTR_0128s0090 33.803 142 78 6 38 172 20 152 4.84e-11 61.2
MsG0680032469.01.T01 MTR_7g056787 41.026 78 45 1 5 81 80 157 5.19e-11 60.5
MsG0680032469.01.T01 MTR_4g053500 60.976 41 16 0 5 45 19 59 7.30e-11 57.4
MsG0680032469.01.T01 MTR_2g426060 26.180 233 134 7 8 212 6 228 8.01e-11 62.4
MsG0680032469.01.T01 MTR_1g068835 26.549 226 125 9 8 212 4 209 8.25e-11 62.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0680032469.01.T01 AT3G23880 30.222 225 120 10 8 210 14 223 2.45e-15 75.5
MsG0680032469.01.T01 AT1G33530 30.526 190 105 7 5 187 94 263 1.01e-12 68.2
MsG0680032469.01.T01 AT3G20690 27.615 239 151 10 8 233 6 235 1.29e-11 64.7
MsG0680032469.01.T01 AT3G18910 30.890 191 110 10 8 186 8 188 6.13e-11 62.8
MsG0680032469.01.T01 AT1G62270 27.064 218 138 7 8 215 12 218 8.22e-11 62.4

Find 60 sgRNAs with CRISPR-Local

Find 70 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GAGAGATGTGGTTCCGTTTC+TGG 0.111674 6:+42118482 MsG0680032469.01.T01:CDS
TGTGATAATTTCACTTGATT+TGG 0.197057 6:+42118807 MsG0680032469.01.T01:CDS
AGAACAATATCAGATAAATT+AGG 0.208237 6:+42118517 MsG0680032469.01.T01:CDS
GCCATCTATTTGTCTGTTGA+TGG 0.262898 6:+42118885 MsG0680032469.01.T01:CDS
TACACTTATGATTTGACATT+TGG 0.291270 6:+42118559 MsG0680032469.01.T01:CDS
GTGATAATTTCACTTGATTT+GGG 0.334905 6:+42118808 MsG0680032469.01.T01:CDS
TAATTTATCTGATATTGTTC+TGG 0.339921 6:-42118515 None:intergenic
TTACTATAGTTTGAAGGATA+AGG 0.342118 6:+42118393 MsG0680032469.01.T01:CDS
TATTACCCAGTGTGAAGTTC+GGG 0.364668 6:-42118273 None:intergenic
TCTGATATTGTTCTGGTAGC+AGG 0.366334 6:-42118508 None:intergenic
AAGGATTGCTTTAATGTTGT+TGG 0.379368 6:+42118412 MsG0680032469.01.T01:CDS
GAACAATATCAGATAAATTA+GGG 0.389031 6:+42118518 MsG0680032469.01.T01:CDS
GCGAGGTATTGTTAATTACT+TGG 0.393552 6:+42118723 MsG0680032469.01.T01:CDS
CCTTGCAATCATACAAAGAA+TGG 0.406327 6:-42118765 None:intergenic
GTATTACCCAGTGTGAAGTT+CGG 0.428751 6:-42118274 None:intergenic
ATGAAACGATCAAAGGAGAT+AGG 0.445890 6:-42118325 None:intergenic
CGATCCTTACTATAGTTTGA+AGG 0.461001 6:+42118387 MsG0680032469.01.T01:CDS
AGGTGCGACTTGATGAATAA+AGG 0.461145 6:-42118232 None:intergenic
CCATTCTTTGTATGATTGCA+AGG 0.462703 6:+42118765 MsG0680032469.01.T01:CDS
TATAGTAAGGATCGTTGGTA+AGG 0.462815 6:-42118378 None:intergenic
ACTTCTACGATAAGTTCGTC+AGG 0.465071 6:-42118133 None:intergenic
TTAGTCTGGGTGATAATGCT+TGG 0.467707 6:+42118641 MsG0680032469.01.T01:CDS
AATGTTGTTGGTTCCTGCAA+TGG 0.468434 6:+42118424 MsG0680032469.01.T01:CDS
CAAACATATCAATCCATTGC+AGG 0.468451 6:-42118437 None:intergenic
AAGGTAGTAAACTTATACCA+AGG 0.472815 6:+42118607 MsG0680032469.01.T01:CDS
CTGATATTGTTCTGGTAGCA+GGG 0.479711 6:-42118507 None:intergenic
TTATCCTTCAAACTATAGTA+AGG 0.499695 6:-42118391 None:intergenic
TCCATCAACAGACAAATAGA+TGG 0.502123 6:-42118886 None:intergenic
CTTGCAATCATACAAAGAAT+GGG 0.508976 6:-42118764 None:intergenic
GTTGGTAAGGGTGATCGGCT+TGG 0.511566 6:-42118365 None:intergenic
TGGTAGCAGGGTTCCAGAAA+CGG 0.514905 6:-42118495 None:intergenic
GGATCGTTGGTAAGGGTGAT+CGG 0.522602 6:-42118370 None:intergenic
GAATATTGTCGGCGATGACA+TGG 0.528341 6:-42118107 None:intergenic
GGGTAATACACTATGTATAG+AGG 0.538054 6:+42118288 MsG0680032469.01.T01:CDS
ACAAAACCCGAACTTCACAC+TGG 0.549872 6:+42118267 MsG0680032469.01.T01:CDS
AGGTAGTAAACTTATACCAA+GGG 0.556278 6:+42118608 MsG0680032469.01.T01:CDS
AATGTCAAATCATAAGTGTA+CGG 0.572887 6:-42118556 None:intergenic
AATGGATTGATATGTTTGCT+CGG 0.574304 6:+42118442 MsG0680032469.01.T01:CDS
CAAAACCCGAACTTCACACT+GGG 0.574710 6:+42118268 MsG0680032469.01.T01:CDS
GGAGTTCCACGATTTACAGC+AGG 0.579343 6:-42118197 None:intergenic
TCGTCAGGGAGGAATATTGT+CGG 0.595853 6:-42118118 None:intergenic
CTTAGCTGATGATCCTTCAC+CGG 0.598112 6:-42118682 None:intergenic
CAAACTATAGTAAGGATCGT+TGG 0.598243 6:-42118383 None:intergenic
ATAGTAAGGATCGTTGGTAA+GGG 0.599089 6:-42118377 None:intergenic
GATCATCAGCTAAGTTGTGA+TGG 0.600070 6:+42118691 MsG0680032469.01.T01:CDS
AAAGGAGATAGGTAAGACAC+TGG 0.617618 6:-42118314 None:intergenic
GTACTTCAACAAATCCTCGA+GGG 0.623928 6:-42118852 None:intergenic
ACTCTCTATGAAACGATCAA+AGG 0.628553 6:-42118332 None:intergenic
TGAAAACTCTTATGCGACTG+AGG 0.630932 6:+42118173 MsG0680032469.01.T01:CDS
TGAGGTCCTGCTGTAAATCG+TGG 0.644274 6:+42118191 MsG0680032469.01.T01:CDS
GAATAAAGGATCAGATACGA+GGG 0.654766 6:-42118218 None:intergenic
TGTGATGGTGTGCATTTGCG+AGG 0.656093 6:+42118706 MsG0680032469.01.T01:CDS
CAAATAGATGGCTTAATACG+TGG 0.660969 6:-42118874 None:intergenic
CTTCTACGATAAGTTCGTCA+GGG 0.664656 6:-42118132 None:intergenic
TACTTCAACAAATCCTCGAG+GGG 0.668161 6:-42118851 None:intergenic
TGAATAAAGGATCAGATACG+AGG 0.671026 6:-42118219 None:intergenic
GGTAGTAAACTTATACCAAG+GGG 0.696717 6:+42118609 MsG0680032469.01.T01:CDS
GGTACTTCAACAAATCCTCG+AGG 0.702246 6:-42118853 None:intergenic
CTACGATAAGTTCGTCAGGG+AGG 0.706479 6:-42118129 None:intergenic
ACTTCAACAAATCCTCGAGG+GGG 0.728431 6:-42118850 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAATGAAAAAGATACTTATA+AGG + Chr6:42118588-42118607 MsG0680032469.01.T01:CDS 15.0%
!! AGAACAATATCAGATAAATT+AGG + Chr6:42118517-42118536 MsG0680032469.01.T01:CDS 20.0%
!! GAACAATATCAGATAAATTA+GGG + Chr6:42118518-42118537 MsG0680032469.01.T01:CDS 20.0%
!! TAATTTATCTGATATTGTTC+TGG - Chr6:42118518-42118537 None:intergenic 20.0%
!!! GAGAAATATTCAAATTTTTC+CGG + Chr6:42118663-42118682 MsG0680032469.01.T01:CDS 20.0%
! AATGTCAAATCATAAGTGTA+CGG - Chr6:42118559-42118578 None:intergenic 25.0%
! GTGATAATTTCACTTGATTT+GGG + Chr6:42118808-42118827 MsG0680032469.01.T01:CDS 25.0%
! TACACTTATGATTTGACATT+TGG + Chr6:42118559-42118578 MsG0680032469.01.T01:CDS 25.0%
! TGTGATAATTTCACTTGATT+TGG + Chr6:42118807-42118826 MsG0680032469.01.T01:CDS 25.0%
! TTACTATAGTTTGAAGGATA+AGG + Chr6:42118393-42118412 MsG0680032469.01.T01:CDS 25.0%
! TTATCCTTCAAACTATAGTA+AGG - Chr6:42118394-42118413 None:intergenic 25.0%
AAGGATTGCTTTAATGTTGT+TGG + Chr6:42118412-42118431 MsG0680032469.01.T01:CDS 30.0%
AAGGTAGTAAACTTATACCA+AGG + Chr6:42118607-42118626 MsG0680032469.01.T01:CDS 30.0%
AGGTAGTAAACTTATACCAA+GGG + Chr6:42118608-42118627 MsG0680032469.01.T01:CDS 30.0%
CTTGCAATCATACAAAGAAT+GGG - Chr6:42118767-42118786 None:intergenic 30.0%
! TATTCAAATTTTTCCGGTGA+AGG + Chr6:42118669-42118688 MsG0680032469.01.T01:CDS 30.0%
!! AATGGATTGATATGTTTGCT+CGG + Chr6:42118442-42118461 MsG0680032469.01.T01:CDS 30.0%
!! CTTTTAAGTATAGAGAGATG+TGG + Chr6:42118470-42118489 MsG0680032469.01.T01:CDS 30.0%
ACTCTCTATGAAACGATCAA+AGG - Chr6:42118335-42118354 None:intergenic 35.0%
ATGAAACGATCAAAGGAGAT+AGG - Chr6:42118328-42118347 None:intergenic 35.0%
CAAACATATCAATCCATTGC+AGG - Chr6:42118440-42118459 None:intergenic 35.0%
CAAACTATAGTAAGGATCGT+TGG - Chr6:42118386-42118405 None:intergenic 35.0%
CAAATAGATGGCTTAATACG+TGG - Chr6:42118877-42118896 None:intergenic 35.0%
CCATTCTTTGTATGATTGCA+AGG + Chr6:42118765-42118784 MsG0680032469.01.T01:CDS 35.0%
CCTTGCAATCATACAAAGAA+TGG - Chr6:42118768-42118787 None:intergenic 35.0%
CGATCCTTACTATAGTTTGA+AGG + Chr6:42118387-42118406 MsG0680032469.01.T01:CDS 35.0%
GAATAAAGGATCAGATACGA+GGG - Chr6:42118221-42118240 None:intergenic 35.0%
GGGTAATACACTATGTATAG+AGG + Chr6:42118288-42118307 MsG0680032469.01.T01:CDS 35.0%
GGTAGTAAACTTATACCAAG+GGG + Chr6:42118609-42118628 MsG0680032469.01.T01:CDS 35.0%
TATAGTAAGGATCGTTGGTA+AGG - Chr6:42118381-42118400 None:intergenic 35.0%
TCCATCAACAGACAAATAGA+TGG - Chr6:42118889-42118908 None:intergenic 35.0%
TGAATAAAGGATCAGATACG+AGG - Chr6:42118222-42118241 None:intergenic 35.0%
! ATAGTAAGGATCGTTGGTAA+GGG - Chr6:42118380-42118399 None:intergenic 35.0%
!! GCGAGGTATTGTTAATTACT+TGG + Chr6:42118723-42118742 MsG0680032469.01.T01:CDS 35.0%
!!! ACTGTCTTTGTTTTGCTTGT+TGG + Chr6:42118908-42118927 MsG0680032469.01.T01:CDS 35.0%
AAAGGAGATAGGTAAGACAC+TGG - Chr6:42118317-42118336 None:intergenic 40.0%
ACTTCTACGATAAGTTCGTC+AGG - Chr6:42118136-42118155 None:intergenic 40.0%
AGGTGCGACTTGATGAATAA+AGG - Chr6:42118235-42118254 None:intergenic 40.0%
CTGATATTGTTCTGGTAGCA+GGG - Chr6:42118510-42118529 None:intergenic 40.0%
CTTCTACGATAAGTTCGTCA+GGG - Chr6:42118135-42118154 None:intergenic 40.0%
GATCATCAGCTAAGTTGTGA+TGG + Chr6:42118691-42118710 MsG0680032469.01.T01:CDS 40.0%
GCCATCTATTTGTCTGTTGA+TGG + Chr6:42118885-42118904 MsG0680032469.01.T01:CDS 40.0%
GTACTTCAACAAATCCTCGA+GGG - Chr6:42118855-42118874 None:intergenic 40.0%
GTATTACCCAGTGTGAAGTT+CGG - Chr6:42118277-42118296 None:intergenic 40.0%
TACTTCAACAAATCCTCGAG+GGG - Chr6:42118854-42118873 None:intergenic 40.0%
TATTACCCAGTGTGAAGTTC+GGG - Chr6:42118276-42118295 None:intergenic 40.0%
TCTGATATTGTTCTGGTAGC+AGG - Chr6:42118511-42118530 None:intergenic 40.0%
TGAAAACTCTTATGCGACTG+AGG + Chr6:42118173-42118192 MsG0680032469.01.T01:CDS 40.0%
! AGTCGCATAAGAGTTTTCAC+AGG - Chr6:42118172-42118191 None:intergenic 40.0%
! TTAGTCTGGGTGATAATGCT+TGG + Chr6:42118641-42118660 MsG0680032469.01.T01:CDS 40.0%
!! AATGTTGTTGGTTCCTGCAA+TGG + Chr6:42118424-42118443 MsG0680032469.01.T01:CDS 40.0%
!! GGTTTTGTGTAGAACGTTGA+AGG - Chr6:42118255-42118274 None:intergenic 40.0%
AAATATTTGCTTCCCCCTCG+AGG + Chr6:42118838-42118857 MsG0680032469.01.T01:CDS 45.0%
ACAAAACCCGAACTTCACAC+TGG + Chr6:42118267-42118286 MsG0680032469.01.T01:CDS 45.0%
ACTTCAACAAATCCTCGAGG+GGG - Chr6:42118853-42118872 None:intergenic 45.0%
CAAAACCCGAACTTCACACT+GGG + Chr6:42118268-42118287 MsG0680032469.01.T01:CDS 45.0%
CTTAGCTGATGATCCTTCAC+CGG - Chr6:42118685-42118704 None:intergenic 45.0%
GACTAAAAACTTTCGCCCCT+TGG - Chr6:42118627-42118646 None:intergenic 45.0%
GGTACTTCAACAAATCCTCG+AGG - Chr6:42118856-42118875 None:intergenic 45.0%
TCGTCAGGGAGGAATATTGT+CGG - Chr6:42118121-42118140 None:intergenic 45.0%
!!! AGGGGCGAAAGTTTTTAGTC+TGG + Chr6:42118627-42118646 MsG0680032469.01.T01:CDS 45.0%
!!! GGGGCGAAAGTTTTTAGTCT+GGG + Chr6:42118628-42118647 MsG0680032469.01.T01:CDS 45.0%
CTACGATAAGTTCGTCAGGG+AGG - Chr6:42118132-42118151 None:intergenic 50.0%
GAGAGATGTGGTTCCGTTTC+TGG + Chr6:42118482-42118501 MsG0680032469.01.T01:CDS 50.0%
GGAGTTCCACGATTTACAGC+AGG - Chr6:42118200-42118219 None:intergenic 50.0%
TGAGGTCCTGCTGTAAATCG+TGG + Chr6:42118191-42118210 MsG0680032469.01.T01:CDS 50.0%
TGGTAGCAGGGTTCCAGAAA+CGG - Chr6:42118498-42118517 None:intergenic 50.0%
! GGATCGTTGGTAAGGGTGAT+CGG - Chr6:42118373-42118392 None:intergenic 50.0%
! TGTGATGGTGTGCATTTGCG+AGG + Chr6:42118706-42118725 MsG0680032469.01.T01:CDS 50.0%
! GTTGGTAAGGGTGATCGGCT+TGG - Chr6:42118368-42118387 None:intergenic 55.0%
Chromosome Type Strat End Strand Name
Chr6 gene 42118109 42118933 42118109 ID=MsG0680032469.01;Name=MsG0680032469.01
Chr6 mRNA 42118109 42118933 42118109 ID=MsG0680032469.01.T01;Parent=MsG0680032469.01;Name=MsG0680032469.01.T01;_AED=0.16;_eAED=0.16;_QI=0|-1|0|1|-1|1|1|0|274
Chr6 exon 42118109 42118933 42118109 ID=MsG0680032469.01.T01:exon:16458;Parent=MsG0680032469.01.T01
Chr6 CDS 42118109 42118933 42118109 ID=MsG0680032469.01.T01:cds;Parent=MsG0680032469.01.T01
Gene Sequence

>MsG0680032469.01.T01

ATGTCATCGCCGACAATATTCCTCCCTGACGAACTTATCGTAGAAGTGCTTTCTTTTCTTCCTGTGAAAACTCTTATGCGACTGAGGTCCTGCTGTAAATCGTGGAACTCCCTCGTATCTGATCCTTTATTCATCAAGTCGCACCTTCAACGTTCTACACAAAACCCGAACTTCACACTGGGTAATACACTATGTATAGAGGATTCCAGTGTCTTACCTATCTCCTTTGATCGTTTCATAGAGAGTTCGTGTTCGTCCAAGCCGATCACCCTTACCAACGATCCTTACTATAGTTTGAAGGATAAGGATTGCTTTAATGTTGTTGGTTCCTGCAATGGATTGATATGTTTGCTCGGTTATTCTTTTAAGTATAGAGAGATGTGGTTCCGTTTCTGGAACCCTGCTACCAGAACAATATCAGATAAATTAGGGCATTTTCGTAGCATACCGTACACTTATGATTTGACATTTGGTTATGATAATGAAAAAGATACTTATAAGGTAGTAAACTTATACCAAGGGGCGAAAGTTTTTAGTCTGGGTGATAATGCTTGGAGAAATATTCAAATTTTTCCGGTGAAGGATCATCAGCTAAGTTGTGATGGTGTGCATTTGCGAGGTATTGTTAATTACTTGGCAATTCACAATTACTGCTCCCATTCTTTGTATGATTGCAAGGATCTTATTGTTGAGCAATTTGTGATAATTTCACTTGATTTGGGCACATACAAATATTTGCTTCCCCCTCGAGGATTTGTTGAAGTACCACGTATTAAGCCATCTATTTGTCTGTTGATGGACTGTCTTTGTTTTGCTTGTTGGTGA
Protein sequence

>MsG0680032469.01.T01

MSSPTIFLPDELIVEVLSFLPVKTLMRLRSCCKSWNSLVSDPLFIKSHLQRSTQNPNFTLGNTLCIEDSSVLPISFDRFIESSCSSKPITLTNDPYYSLKDKDCFNVVGSCNGLICLLGYSFKYREMWFRFWNPATRTISDKLGHFRSIPYTYDLTFGYDNEKDTYKVVNLYQGAKVFSLGDNAWRNIQIFPVKDHQLSCDGVHLRGIVNYLAIHNYCSHSLYDCKDLIVEQFVIISLDLGTYKYLLPPRGFVEVPRIKPSICLLMDCLCFACW*