AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0780039763.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0780039763.01.T01 MTR_7g079160 79.335 421 34 4 1 371 1 418 0.0 643
MsG0780039763.01.T01 MTR_7g078900 53.333 420 146 9 10 388 14 424 3.76e-134 390
MsG0780039763.01.T01 MTR_4g013185 49.884 431 161 9 3 387 5 426 7.20e-131 382
MsG0780039763.01.T01 MTR_7g078040 51.142 438 160 10 1 388 1 434 3.38e-130 381
MsG0780039763.01.T01 MTR_7g078840 51.034 435 160 8 1 387 3 432 5.57e-130 380
MsG0780039763.01.T01 MTR_4g013180 52.564 390 163 8 2 372 4 390 5.28e-126 372
MsG0780039763.01.T01 MTR_7g077070 50.463 432 161 9 1 388 9 431 6.27e-124 365
MsG0780039763.01.T01 MTR_4g013175 50.583 429 163 7 3 388 5 427 1.23e-123 364
MsG0780039763.01.T01 MTR_7g078860 53.316 392 144 10 2 362 3 386 1.30e-123 362
MsG0780039763.01.T01 MTR_0242s0060 51.494 435 148 14 1 388 1 419 2.79e-123 363
MsG0780039763.01.T01 MTR_0242s0040 51.494 435 148 14 1 388 1 419 2.79e-123 363
MsG0780039763.01.T01 MTR_7g077990 52.381 399 152 10 3 383 12 390 1.19e-117 348
MsG0780039763.01.T01 MTR_3g013470 52.926 376 139 7 27 381 14 372 2.63e-117 346
MsG0780039763.01.T01 MTR_7g077970 49.061 426 163 9 8 388 7 423 1.60e-116 345
MsG0780039763.01.T01 MTR_1g088120 46.279 430 165 12 2 387 4 411 6.47e-112 333
MsG0780039763.01.T01 MTR_4g008790 49.631 407 137 10 3 360 34 421 6.63e-108 325
MsG0780039763.01.T01 MTR_1g029650 45.199 427 171 12 1 387 1 404 7.00e-103 310
MsG0780039763.01.T01 MTR_1g015730 47.129 418 166 12 2 388 3 396 2.57e-100 303
MsG0780039763.01.T01 MTR_1g015740 47.044 389 144 11 1 388 1 328 6.62e-97 292
MsG0780039763.01.T01 MTR_5g058620 55.634 284 98 9 118 388 15 283 6.78e-92 278
MsG0780039763.01.T01 MTR_1g058870 55.634 284 98 9 118 388 15 283 6.78e-92 278
MsG0780039763.01.T01 MTR_7g056390 40.647 433 175 12 7 388 17 418 1.58e-88 274
MsG0780039763.01.T01 MTR_7g056290 39.954 438 180 13 2 388 17 422 1.31e-86 269
MsG0780039763.01.T01 MTR_7g056503 40.376 426 170 12 1 385 14 396 2.31e-86 268
MsG0780039763.01.T01 MTR_7g077910 57.194 278 91 8 121 388 78 337 7.12e-85 261
MsG0780039763.01.T01 MTR_7g055870 39.024 451 164 14 7 385 12 423 2.51e-83 261
MsG0780039763.01.T01 MTR_7g057270 41.190 420 174 13 7 385 25 412 2.53e-82 258
MsG0780039763.01.T01 MTR_7g078880 44.072 388 124 9 6 383 7 311 6.07e-82 256
MsG0780039763.01.T01 MTR_6g065510 43.557 388 136 11 6 387 21 331 1.27e-81 253
MsG0780039763.01.T01 MTR_3g072470 38.851 435 180 12 7 388 18 419 1.39e-81 256
MsG0780039763.01.T01 MTR_3g464470 41.606 411 178 11 3 385 2 378 5.25e-81 253
MsG0780039763.01.T01 MTR_0464s0020 40.547 439 178 14 2 385 17 427 1.63e-80 253
MsG0780039763.01.T01 MTR_6g055210 39.583 432 172 14 8 385 22 418 5.24e-80 253
MsG0780039763.01.T01 MTR_7g078960 52.941 272 107 4 121 387 32 287 5.89e-80 247
MsG0780039763.01.T01 MTR_7g091630 40.230 435 177 15 6 388 30 433 6.36e-80 252
MsG0780039763.01.T01 MTR_2g043400 39.450 436 178 14 1 385 16 416 1.16e-79 251
MsG0780039763.01.T01 MTR_8g066440 39.151 424 172 13 7 387 22 402 2.25e-79 249
MsG0780039763.01.T01 MTR_6g016285 39.450 436 170 16 6 385 19 416 4.80e-79 250
MsG0780039763.01.T01 MTR_3g437520 42.118 406 165 12 2 354 17 405 7.96e-79 250
MsG0780039763.01.T01 MTR_4g019990 38.642 427 176 14 4 385 2 387 4.64e-78 246
MsG0780039763.01.T01 MTR_3g080370 39.773 440 163 13 6 385 19 416 6.86e-78 247
MsG0780039763.01.T01 MTR_3g464500 40.000 415 180 12 4 385 23 401 1.24e-77 245
MsG0780039763.01.T01 MTR_2g043410 39.401 434 175 15 4 385 18 415 1.38e-77 246
MsG0780039763.01.T01 MTR_5g069760 39.379 419 169 12 4 387 2 370 1.80e-77 244
MsG0780039763.01.T01 MTR_7g056003 39.352 432 170 14 7 385 14 406 6.06e-77 244
MsG0780039763.01.T01 MTR_7g062100 40.964 415 165 16 8 385 24 395 8.47e-77 243
MsG0780039763.01.T01 MTR_4g030830 38.756 418 184 13 7 385 8 392 1.16e-76 243
MsG0780039763.01.T01 MTR_7g055830 39.303 402 163 11 7 385 12 355 1.52e-75 238
MsG0780039763.01.T01 MTR_7g066850 38.955 421 178 14 6 385 21 403 2.14e-75 241
MsG0780039763.01.T01 MTR_4g031020 36.323 446 192 13 4 386 11 427 6.12e-75 239
MsG0780039763.01.T01 MTR_7g060940 38.208 424 171 14 4 385 18 392 8.97e-75 238
MsG0780039763.01.T01 MTR_7g055987 42.033 364 131 12 2 328 15 335 1.01e-74 236
MsG0780039763.01.T01 MTR_0649s0020 38.928 429 175 14 1 385 1 386 1.28e-74 237
MsG0780039763.01.T01 MTR_1g442850 39.750 400 185 13 10 385 7 374 1.42e-74 236
MsG0780039763.01.T01 MTR_0707s0020 37.723 448 186 16 5 386 23 443 2.21e-74 238
MsG0780039763.01.T01 MTR_4g024890 38.015 413 194 11 2 385 4 383 4.51e-74 235
MsG0780039763.01.T01 MTR_7g445890 38.750 400 195 13 6 386 14 382 8.03e-74 235
MsG0780039763.01.T01 MTR_5g056020 38.028 426 195 12 7 385 16 419 3.52e-73 236
MsG0780039763.01.T01 MTR_7g061090 38.443 424 186 14 2 385 16 404 3.63e-73 234
MsG0780039763.01.T01 MTR_7g062060 38.173 427 179 15 8 387 12 400 4.73e-73 233
MsG0780039763.01.T01 MTR_4g030980 36.000 450 193 14 3 386 7 427 7.91e-73 234
MsG0780039763.01.T01 MTR_7g055977 38.810 420 178 15 5 387 4 381 3.36e-72 231
MsG0780039763.01.T01 MTR_2g010950 38.107 412 197 12 6 385 18 403 3.50e-72 231
MsG0780039763.01.T01 MTR_2g010920 37.355 431 198 14 4 385 16 423 1.85e-71 230
MsG0780039763.01.T01 MTR_6g086920 37.336 458 186 18 5 385 35 468 2.59e-71 231
MsG0780039763.01.T01 MTR_7g056760 36.516 419 191 12 6 385 21 403 5.43e-71 228
MsG0780039763.01.T01 MTR_7g022600 36.199 442 193 16 1 388 17 423 5.93e-70 226
MsG0780039763.01.T01 MTR_7g028660 36.215 428 178 12 2 387 5 379 8.46e-70 224
MsG0780039763.01.T01 MTR_7g056710 38.350 412 170 14 8 385 18 379 1.05e-69 224
MsG0780039763.01.T01 MTR_0128s0020 38.902 419 179 17 6 387 16 394 5.14e-69 223
MsG0780039763.01.T01 MTR_7g066840 40.247 405 188 17 6 385 21 396 7.32e-69 223
MsG0780039763.01.T01 MTR_5g068040 39.066 407 188 11 4 387 12 381 7.78e-69 222
MsG0780039763.01.T01 MTR_4g129190 38.318 428 173 16 8 387 6 390 8.57e-69 222
MsG0780039763.01.T01 MTR_7g061050 37.561 410 188 13 6 385 11 382 1.20e-68 221
MsG0780039763.01.T01 MTR_7g050480 37.232 419 184 14 1 385 15 388 1.51e-68 221
MsG0780039763.01.T01 MTR_6g092560 36.538 416 199 14 6 386 10 395 1.88e-68 223
MsG0780039763.01.T01 MTR_6g017280 37.055 421 185 11 5 385 6 386 2.69e-68 221
MsG0780039763.01.T01 MTR_4g030090 37.558 434 170 16 6 385 12 398 2.91e-68 221
MsG0780039763.01.T01 MTR_7g061060 37.650 417 180 14 6 378 11 391 3.22e-68 221
MsG0780039763.01.T01 MTR_4g128320 46.182 275 112 7 92 361 23 266 3.49e-68 217
MsG0780039763.01.T01 MTR_7g091640 41.840 337 139 10 6 306 33 348 6.61e-68 219
MsG0780039763.01.T01 MTR_7g056737 39.674 368 192 9 3 354 17 370 7.81e-68 220
MsG0780039763.01.T01 MTR_5g043160 35.440 443 189 13 6 385 48 456 1.05e-67 221
MsG0780039763.01.T01 MTR_2g047200 36.300 427 187 15 2 388 14 395 1.23e-67 219
MsG0780039763.01.T01 MTR_7g050520 36.516 419 187 14 1 385 15 388 1.59e-67 219
MsG0780039763.01.T01 MTR_7g056200 37.438 406 186 14 4 385 19 380 2.88e-67 218
MsG0780039763.01.T01 MTR_7g070880 38.542 384 191 13 8 352 21 398 2.95e-67 219
MsG0780039763.01.T01 MTR_7g061010 37.108 415 182 13 4 385 18 386 7.40e-67 217
MsG0780039763.01.T01 MTR_7g070830 37.063 429 202 15 2 385 14 419 2.91e-66 216
MsG0780039763.01.T01 MTR_2g047892 36.585 410 204 11 2 385 16 395 3.18e-66 216
MsG0780039763.01.T01 MTR_4g011660 35.426 446 184 14 2 385 13 416 3.96e-66 216
MsG0780039763.01.T01 MTR_7g056717 38.609 417 173 11 3 385 17 384 4.46e-66 215
MsG0780039763.01.T01 MTR_5g069930 35.392 421 190 12 4 387 2 377 5.59e-66 214
MsG0780039763.01.T01 MTR_2g047878 39.599 399 175 16 2 385 15 362 7.29e-66 214
MsG0780039763.01.T01 MTR_4g033495 36.277 419 190 12 4 384 23 402 1.45e-65 215
MsG0780039763.01.T01 MTR_7g052150 35.714 420 193 14 4 385 18 398 3.31e-65 213
MsG0780039763.01.T01 MTR_7g052670 36.607 448 175 16 5 385 18 423 5.11e-65 214
MsG0780039763.01.T01 MTR_0128s0070 36.364 418 190 14 6 387 20 397 6.73e-65 212
MsG0780039763.01.T01 MTR_1g071010 35.096 416 189 12 7 385 14 385 7.43e-65 212
MsG0780039763.01.T01 MTR_7g022670 35.000 380 192 10 8 385 23 349 8.13e-65 211
MsG0780039763.01.T01 MTR_7g056173 45.489 266 117 6 131 385 17 265 1.53e-64 209
MsG0780039763.01.T01 MTR_7g056820 35.279 377 198 8 4 355 3 358 2.48e-64 210
MsG0780039763.01.T01 MTR_7g078940 37.097 434 167 16 1 385 24 400 2.76e-64 211
MsG0780039763.01.T01 MTR_5g096710 34.856 416 196 13 6 385 21 397 5.05e-64 210
MsG0780039763.01.T01 MTR_2g006360 37.949 390 161 15 5 385 44 361 1.25e-63 208
MsG0780039763.01.T01 MTR_7g035295 36.175 434 156 15 5 385 13 378 2.25e-63 208
MsG0780039763.01.T01 MTR_0097s0030 36.098 410 201 13 4 385 10 386 5.10e-63 207
MsG0780039763.01.T01 MTR_2g047240 36.098 410 201 13 4 385 10 386 5.10e-63 207
MsG0780039763.01.T01 MTR_7g055953 47.222 252 102 6 141 387 90 315 2.81e-62 203
MsG0780039763.01.T01 MTR_7g066030 35.731 431 192 14 1 387 14 403 7.49e-62 204
MsG0780039763.01.T01 MTR_7g055930 45.525 257 110 8 141 385 185 423 1.94e-61 204
MsG0780039763.01.T01 MTR_7g055930 48.571 105 33 3 7 111 12 95 3.73e-17 83.2
MsG0780039763.01.T01 MTR_7g056570 37.778 405 188 11 8 387 18 383 2.88e-61 204
MsG0780039763.01.T01 MTR_7g056260 39.450 327 155 9 2 302 8 317 7.18e-61 199
MsG0780039763.01.T01 MTR_2g461450 37.275 389 166 13 2 356 12 356 1.50e-60 199
MsG0780039763.01.T01 MTR_0128s0010 33.735 415 201 14 7 385 20 396 3.59e-60 200
MsG0780039763.01.T01 MTR_7g060960 38.560 389 178 15 6 385 30 366 8.62e-60 198
MsG0780039763.01.T01 MTR_4g030110 34.925 398 178 12 2 358 24 381 9.20e-60 198
MsG0780039763.01.T01 MTR_2g010900 36.592 358 164 11 26 341 1 337 2.04e-59 197
MsG0780039763.01.T01 MTR_7g056797 35.181 415 200 12 6 385 21 401 7.15e-59 196
MsG0780039763.01.T01 MTR_2g437110 35.240 437 163 13 5 385 19 391 2.36e-58 197
MsG0780039763.01.T01 MTR_7g113500 43.478 253 121 5 139 385 144 380 3.07e-58 194
MsG0780039763.01.T01 MTR_7g066000 33.886 422 198 15 6 387 23 403 3.86e-58 194
MsG0780039763.01.T01 MTR_7g066100 34.713 435 192 16 2 387 3 394 1.61e-57 193
MsG0780039763.01.T01 MTR_7g445750 36.607 336 142 10 4 291 19 331 6.96e-56 187
MsG0780039763.01.T01 MTR_6g017305 42.857 266 126 6 129 385 32 280 8.82e-56 185
MsG0780039763.01.T01 MTR_4g034860 36.490 359 171 11 35 352 49 391 2.63e-55 187
MsG0780039763.01.T01 MTR_7g066060 36.480 392 198 13 1 356 16 392 2.73e-55 190
MsG0780039763.01.T01 MTR_4g030760 33.738 412 188 15 6 385 71 429 3.90e-55 187
MsG0780039763.01.T01 MTR_4g037465 34.555 382 194 12 2 351 15 372 5.35e-55 186
MsG0780039763.01.T01 MTR_4g129160 36.512 367 179 14 7 331 6 360 6.17e-55 185
MsG0780039763.01.T01 MTR_6g088385 41.489 282 119 8 121 386 67 318 1.47e-53 180
MsG0780039763.01.T01 MTR_7g066080 36.675 409 185 15 7 359 15 405 2.66e-53 183
MsG0780039763.01.T01 MTR_7g009265 44.186 258 115 7 141 387 85 324 3.31e-53 179
MsG0780039763.01.T01 MTR_7g034310 43.145 248 104 5 141 387 17 228 5.14e-53 176
MsG0780039763.01.T01 MTR_7g056170 32.667 450 173 13 4 385 71 458 6.64e-52 180
MsG0780039763.01.T01 MTR_7g066010 33.179 431 170 16 1 387 14 370 4.45e-49 170
MsG0780039763.01.T01 MTR_1g047490 37.003 327 147 8 2 303 15 307 7.27e-49 168
MsG0780039763.01.T01 MTR_6g017295 36.646 322 142 9 91 354 12 329 8.78e-49 173
MsG0780039763.01.T01 MTR_7g006360 33.333 381 140 10 9 388 10 277 1.86e-48 166
MsG0780039763.01.T01 MTR_7g091610 46.429 196 86 5 199 388 67 249 2.46e-47 162
MsG0780039763.01.T01 MTR_2g017720 37.762 286 143 8 101 382 42 296 5.48e-47 166
MsG0780039763.01.T01 MTR_6g081280 41.502 253 113 7 139 385 16 239 8.30e-47 160
MsG0780039763.01.T01 MTR_0267s0050 30.867 392 199 8 7 356 6 367 2.57e-46 163
MsG0780039763.01.T01 MTR_4g030790 36.943 314 141 10 6 305 17 287 6.77e-46 160
MsG0780039763.01.T01 MTR_3g013950 29.540 413 217 9 4 372 2 384 4.83e-45 160
MsG0780039763.01.T01 MTR_1g112010 33.155 374 182 12 30 386 2 324 3.73e-44 155
MsG0780039763.01.T01 MTR_8g101940 32.593 405 210 15 7 386 1 367 1.13e-43 155
MsG0780039763.01.T01 MTR_2g010935 38.247 251 115 5 138 385 35 248 1.13e-43 152
MsG0780039763.01.T01 MTR_2g047895 40.359 223 108 7 139 356 91 293 3.85e-42 151
MsG0780039763.01.T01 MTR_4g006350 29.612 412 228 13 6 385 492 873 9.76e-42 157
MsG0780039763.01.T01 MTR_7g070440 32.381 420 201 18 1 386 1 371 9.29e-41 148
MsG0780039763.01.T01 MTR_4g020000 40.000 245 129 6 139 375 111 345 1.08e-40 147
MsG0780039763.01.T01 MTR_7g061940 42.029 207 96 6 143 344 79 266 1.89e-40 144
MsG0780039763.01.T01 MTR_2g021150 31.159 414 203 16 1 385 7 367 8.36e-40 145
MsG0780039763.01.T01 MTR_8g030630 42.000 200 95 5 184 369 73 265 1.42e-37 141
MsG0780039763.01.T01 MTR_8g030630 37.104 221 107 4 137 351 246 440 6.01e-35 134
MsG0780039763.01.T01 MTR_6g042600 44.382 178 78 4 215 386 162 324 3.75e-37 139
MsG0780039763.01.T01 MTR_7g056023 39.236 288 131 13 5 284 27 278 1.32e-36 134
MsG0780039763.01.T01 MTR_7g058630 43.575 179 82 4 209 385 17 178 1.33e-35 129
MsG0780039763.01.T01 MTR_2g027820 40.704 199 97 5 191 385 118 299 6.09e-35 130
MsG0780039763.01.T01 MTR_7g061100 37.008 254 120 9 6 254 11 229 1.36e-33 127
MsG0780039763.01.T01 MTR_7g037670 29.177 401 177 14 6 387 21 333 2.29e-33 127
MsG0780039763.01.T01 MTR_5g022420 28.841 371 208 11 5 358 24 355 8.11e-33 127
MsG0780039763.01.T01 MTR_2g060555 36.283 226 106 9 134 356 80 270 1.96e-32 123
MsG0780039763.01.T01 MTR_3g011020 31.316 380 185 17 5 355 25 357 2.02e-32 125
MsG0780039763.01.T01 MTR_1g097560 28.613 346 176 10 8 331 36 332 9.34e-32 124
MsG0780039763.01.T01 MTR_5g069950 40.230 174 73 4 137 308 59 203 1.26e-31 119
MsG0780039763.01.T01 MTR_3g009240 28.883 367 180 12 3 337 31 348 5.82e-31 122
MsG0780039763.01.T01 MTR_2g046920 28.571 371 197 14 7 350 23 352 1.34e-30 120
MsG0780039763.01.T01 MTR_0128s0110 32.836 201 121 5 169 364 4 195 1.89e-30 116
MsG0780039763.01.T01 MTR_7g013590 30.982 397 229 16 6 385 34 402 3.06e-30 120
MsG0780039763.01.T01 MTR_1g058190 28.338 367 204 15 4 355 31 353 2.47e-29 117
MsG0780039763.01.T01 MTR_4g053470 30.499 341 160 11 6 332 20 297 3.25e-29 115
MsG0780039763.01.T01 MTR_2g046900 28.800 375 197 16 8 350 28 364 7.13e-29 116
MsG0780039763.01.T01 MTR_1g050542 29.379 354 179 14 7 334 57 365 8.49e-29 116
MsG0780039763.01.T01 MTR_2g021190 30.287 383 189 19 5 355 18 354 2.44e-28 114
MsG0780039763.01.T01 MTR_7g070900 40.394 203 76 9 134 328 230 395 2.80e-28 115
MsG0780039763.01.T01 MTR_7g070900 38.217 157 73 5 6 158 13 149 1.41e-17 84.7
MsG0780039763.01.T01 MTR_4g024910 29.752 363 153 12 26 385 1 264 3.69e-28 113
MsG0780039763.01.T01 MTR_1g016960 53.448 116 40 3 277 388 152 257 4.37e-28 111
MsG0780039763.01.T01 MTR_1g016960 37.952 166 68 10 65 212 3 151 1.31e-15 76.6
MsG0780039763.01.T01 MTR_5g046300 28.278 389 225 15 8 385 4 349 5.64e-28 113
MsG0780039763.01.T01 MTR_5g046290 28.278 389 225 15 8 385 4 349 5.64e-28 113
MsG0780039763.01.T01 MTR_4g031770 28.467 411 220 17 5 385 1 367 1.40e-27 112
MsG0780039763.01.T01 MTR_7g070937 46.617 133 62 5 139 264 10 140 1.87e-27 107
MsG0780039763.01.T01 MTR_2g079810 32.472 271 137 11 6 254 5 251 2.09e-27 110
MsG0780039763.01.T01 MTR_7g030040 29.124 388 166 12 6 388 55 338 2.49e-27 111
MsG0780039763.01.T01 MTR_1g097490 26.273 373 202 11 8 355 49 373 1.05e-26 110
MsG0780039763.01.T01 MTR_7g056793 32.669 251 101 8 138 385 45 230 1.96e-26 106
MsG0780039763.01.T01 MTR_1g046600 42.771 166 65 4 31 167 70 234 1.97e-26 107
MsG0780039763.01.T01 MTR_1g046600 64.474 76 21 2 274 344 232 306 1.70e-19 88.6
MsG0780039763.01.T01 MTR_2g047832 27.957 372 216 14 8 350 29 377 2.47e-26 109
MsG0780039763.01.T01 MTR_6g017270 48.120 133 49 3 260 385 220 339 2.48e-26 108
MsG0780039763.01.T01 MTR_6g017270 31.390 223 103 5 3 190 4 211 2.40e-22 97.4
MsG0780039763.01.T01 MTR_2g028160 27.632 380 206 14 8 346 5 356 2.95e-26 109
MsG0780039763.01.T01 MTR_5g011350 34.783 230 95 9 86 281 38 246 3.36e-26 105
MsG0780039763.01.T01 MTR_1g097330 27.179 390 190 14 5 355 13 347 3.90e-26 108
MsG0780039763.01.T01 MTR_3g007330 29.891 368 201 16 5 352 45 375 6.50e-26 108
MsG0780039763.01.T01 MTR_2g046830 27.596 366 205 12 8 350 25 353 2.08e-25 106
MsG0780039763.01.T01 MTR_3g007270 29.863 365 192 17 2 335 41 372 2.51e-25 106
MsG0780039763.01.T01 MTR_8g101580 28.533 375 199 15 8 355 45 377 3.04e-25 106
MsG0780039763.01.T01 MTR_2g055970 29.111 371 191 18 6 348 209 535 3.57e-25 107
MsG0780039763.01.T01 MTR_3g014540 30.000 310 183 11 8 303 29 318 4.70e-25 105
MsG0780039763.01.T01 MTR_7g407070 27.979 386 171 15 3 331 27 362 5.55e-25 105
MsG0780039763.01.T01 MTR_2g021155 28.415 366 204 14 3 348 34 361 5.77e-25 107
MsG0780039763.01.T01 MTR_2g021155 26.519 362 165 16 4 355 667 937 1.52e-16 82.0
MsG0780039763.01.T01 MTR_1g054575 28.448 348 177 14 7 326 51 354 5.95e-25 107
MsG0780039763.01.T01 MTR_3g013740 28.857 350 198 14 8 331 44 368 6.44e-25 105
MsG0780039763.01.T01 MTR_3g055000 37.748 151 67 3 236 385 1 125 1.30e-24 98.2
MsG0780039763.01.T01 MTR_7g078050 44.138 145 54 6 1 143 1 120 1.49e-24 101
MsG0780039763.01.T01 MTR_8g467140 29.909 331 162 13 5 304 29 320 1.68e-24 103
MsG0780039763.01.T01 MTR_5g057710 31.310 313 171 15 8 302 46 332 1.81e-24 103
MsG0780039763.01.T01 MTR_0044s0300 30.323 310 177 12 8 303 38 322 4.85e-24 102
MsG0780039763.01.T01 MTR_7g062070 46.610 118 58 3 239 352 75 191 4.99e-24 98.6
MsG0780039763.01.T01 MTR_2g046800 27.157 394 200 17 7 350 13 369 5.92e-24 102
MsG0780039763.01.T01 MTR_4g024870 32.841 271 129 11 9 245 45 296 1.13e-23 102
MsG0780039763.01.T01 MTR_8g062660 30.864 324 153 14 7 294 21 309 1.86e-23 102
MsG0780039763.01.T01 MTR_7g089830 38.562 153 70 4 199 343 4 140 2.04e-23 95.5
MsG0780039763.01.T01 MTR_3g011060 27.249 389 185 14 8 348 28 366 2.24e-23 100
MsG0780039763.01.T01 MTR_4g108820 30.693 303 160 12 8 308 42 296 2.42e-23 99.8
MsG0780039763.01.T01 MTR_3g007360 26.471 374 225 14 11 364 55 398 3.64e-23 100
MsG0780039763.01.T01 MTR_2g028130 27.273 374 194 14 8 336 5 345 3.67e-23 100
MsG0780039763.01.T01 MTR_3g010390 26.121 379 228 12 3 353 28 382 3.85e-23 100
MsG0780039763.01.T01 MTR_3g011100 30.000 320 178 11 5 302 232 527 7.46e-23 100
MsG0780039763.01.T01 MTR_2g426020 26.776 366 195 13 8 336 6 335 8.33e-23 99.4
MsG0780039763.01.T01 MTR_7g445580 45.370 108 55 2 245 352 42 145 1.20e-22 93.2
MsG0780039763.01.T01 MTR_3g014570 26.121 379 231 12 3 361 24 373 1.47e-22 98.6
MsG0780039763.01.T01 MTR_2g029990 26.817 399 221 20 9 385 52 401 2.09e-22 98.2
MsG0780039763.01.T01 MTR_5g011200 30.938 320 176 15 1 300 11 305 3.12e-22 97.4
MsG0780039763.01.T01 MTR_3g007410 28.939 311 179 12 11 303 55 341 3.16e-22 97.8
MsG0780039763.01.T01 MTR_3g083640 26.368 402 229 16 2 385 49 401 4.06e-22 97.4
MsG0780039763.01.T01 MTR_7g077930 59.701 67 27 0 1 67 12 78 4.26e-22 90.5
MsG0780039763.01.T01 MTR_1g068875 27.119 354 198 16 8 337 4 321 5.14e-22 97.1
MsG0780039763.01.T01 MTR_1g094210 25.321 312 180 9 7 300 56 332 7.79e-22 96.7
MsG0780039763.01.T01 MTR_3g009260 27.202 386 229 15 3 376 36 381 9.10e-22 96.3
MsG0780039763.01.T01 MTR_1g094210 25.321 312 180 9 7 300 56 332 1.00e-21 96.3
MsG0780039763.01.T01 MTR_8g099460 25.197 381 223 12 8 358 5 353 1.22e-21 95.9
MsG0780039763.01.T01 MTR_3g009310 25.707 389 205 13 3 355 37 377 1.23e-21 95.9
MsG0780039763.01.T01 MTR_4g055060 28.793 323 187 12 4 306 26 325 1.72e-21 95.5
MsG0780039763.01.T01 MTR_5g057690 28.571 308 176 13 8 302 46 322 2.56e-21 94.7
MsG0780039763.01.T01 MTR_7g007300 28.000 400 218 17 3 385 98 444 2.72e-21 95.5
MsG0780039763.01.T01 MTR_2g021050 26.615 387 230 14 8 376 5 355 2.85e-21 94.7
MsG0780039763.01.T01 MTR_1g115160 29.744 390 222 16 8 388 22 368 3.40e-21 94.4
MsG0780039763.01.T01 MTR_7g050490 34.123 211 86 8 1 181 1 188 3.74e-21 90.5
MsG0780039763.01.T01 MTR_6g065980 28.344 314 161 13 8 300 16 286 8.96e-21 93.2
MsG0780039763.01.T01 MTR_3g010590 27.363 402 222 19 3 385 34 384 9.33e-21 93.2
MsG0780039763.01.T01 MTR_2g426070 27.198 364 204 13 9 337 7 344 1.10e-20 93.2
MsG0780039763.01.T01 MTR_6g027910 30.448 335 173 14 1 300 1 310 1.26e-20 92.8
MsG0780039763.01.T01 MTR_3g006570 26.525 377 209 17 8 355 21 358 1.29e-20 92.8
MsG0780039763.01.T01 MTR_5g057790 29.393 313 177 15 8 302 46 332 1.42e-20 92.8
MsG0780039763.01.T01 MTR_3g006670 26.426 333 172 13 5 303 46 339 1.54e-20 92.8
MsG0780039763.01.T01 MTR_6g048150 43.925 107 41 3 282 383 13 105 2.48e-20 86.7
MsG0780039763.01.T01 MTR_2g425980 26.389 360 206 12 8 333 5 339 3.87e-20 91.7
MsG0780039763.01.T01 MTR_4g107820 28.528 326 166 13 8 305 36 322 5.80e-20 90.9
MsG0780039763.01.T01 MTR_4g107780 28.528 326 166 13 8 305 36 322 5.80e-20 90.9
MsG0780039763.01.T01 MTR_3g013770 28.012 332 167 12 4 300 29 323 7.25e-20 90.9
MsG0780039763.01.T01 MTR_4g023090 28.198 344 199 13 4 330 12 324 7.29e-20 90.9
MsG0780039763.01.T01 MTR_3g030350 29.747 316 179 14 8 307 35 323 7.46e-20 90.9
MsG0780039763.01.T01 MTR_6g004660 26.814 317 196 9 7 302 15 316 8.52e-20 90.5
MsG0780039763.01.T01 MTR_4g107820 28.528 326 166 13 8 305 36 322 8.59e-20 90.9
MsG0780039763.01.T01 MTR_4g107780 28.528 326 166 13 8 305 36 322 9.44e-20 90.5
MsG0780039763.01.T01 MTR_3g036290 26.603 312 184 13 2 301 16 294 1.05e-19 89.7
MsG0780039763.01.T01 MTR_2g025420 26.632 383 205 15 7 342 5 358 1.07e-19 90.5
MsG0780039763.01.T01 MTR_7g055850 49.524 105 32 3 7 111 12 95 1.22e-19 88.6
MsG0780039763.01.T01 MTR_6g007135 28.108 370 216 16 7 352 25 368 1.22e-19 90.1
MsG0780039763.01.T01 MTR_4g061340 27.168 346 165 15 1 303 17 318 1.35e-19 89.7
MsG0780039763.01.T01 MTR_3g036335 24.933 373 203 15 8 347 41 369 1.40e-19 90.1
MsG0780039763.01.T01 MTR_4g053510 44.068 118 47 5 6 123 20 118 1.52e-19 84.3
MsG0780039763.01.T01 MTR_0667s0010 27.301 326 179 13 8 300 6 306 1.63e-19 89.7
MsG0780039763.01.T01 MTR_2g028110 24.501 351 206 9 8 333 4 320 1.85e-19 89.4
MsG0780039763.01.T01 MTR_5g007610 26.720 378 220 15 4 353 37 385 1.99e-19 89.7
MsG0780039763.01.T01 MTR_4g023080 28.235 340 194 14 4 330 5 307 4.10e-19 88.2
MsG0780039763.01.T01 MTR_0354s0030 44.444 108 41 2 285 386 1 95 4.40e-19 82.0
MsG0780039763.01.T01 MTR_2g078900 26.899 316 187 11 5 304 30 317 4.78e-19 87.8
MsG0780039763.01.T01 MTR_0064s0060 42.727 110 49 3 3 112 12 107 5.11e-19 83.2
MsG0780039763.01.T01 MTR_4g133170 23.876 356 206 12 8 337 4 320 5.17e-19 88.2
MsG0780039763.01.T01 MTR_2g426090 25.849 383 226 14 6 357 5 360 5.28e-19 88.6
MsG0780039763.01.T01 MTR_3g006530 28.796 382 212 16 1 355 33 381 6.10e-19 88.2
MsG0780039763.01.T01 MTR_2g024110 25.706 354 198 13 8 333 4 320 8.72e-19 87.4
MsG0780039763.01.T01 MTR_7g066040 39.706 136 72 5 139 266 82 215 1.06e-18 85.1
MsG0780039763.01.T01 MTR_7g021580 36.449 214 99 13 8 213 33 217 1.16e-18 85.9
MsG0780039763.01.T01 MTR_7g021580 41.414 99 41 2 287 385 218 299 1.22e-15 77.4
MsG0780039763.01.T01 MTR_3g030330 27.723 404 227 19 1 385 13 370 1.46e-18 86.7
MsG0780039763.01.T01 MTR_1g058760 61.765 68 24 1 7 72 10 77 1.50e-18 80.1
MsG0780039763.01.T01 MTR_1g054725 29.781 319 174 16 8 302 20 312 1.77e-18 86.7
MsG0780039763.01.T01 MTR_2g078850 26.115 314 183 11 11 304 33 317 2.65e-18 85.9
MsG0780039763.01.T01 MTR_2g028140 26.239 343 177 13 8 300 5 321 2.66e-18 86.3
MsG0780039763.01.T01 MTR_5g046260 24.595 309 172 11 8 307 4 260 3.02e-18 84.7
MsG0780039763.01.T01 MTR_3g010870 24.691 405 230 15 3 385 32 383 3.16e-18 85.9
MsG0780039763.01.T01 MTR_4g021785 27.139 339 204 11 2 330 3 308 8.86e-18 84.3
MsG0780039763.01.T01 MTR_0760s0010 28.896 308 168 14 13 303 52 325 1.13e-17 84.3
MsG0780039763.01.T01 MTR_3g010970 27.635 351 180 17 11 338 51 350 1.68e-17 84.0
MsG0780039763.01.T01 MTR_2g021210 27.103 321 170 11 8 304 84 364 1.69e-17 84.0
MsG0780039763.01.T01 MTR_2g031680 23.747 379 222 14 7 358 5 343 2.08e-17 83.6
MsG0780039763.01.T01 MTR_1g056710 27.764 407 226 19 3 387 29 389 2.67e-17 83.2
MsG0780039763.01.T01 MTR_1g055375 26.961 408 216 20 11 385 7 365 5.79e-17 82.0
MsG0780039763.01.T01 MTR_2g046860 29.384 211 124 8 143 350 57 245 7.41e-17 81.3
MsG0780039763.01.T01 MTR_1g068860 25.382 327 181 12 5 301 1 294 9.86e-17 81.3
MsG0780039763.01.T01 MTR_4g089125 59.677 62 24 1 4 65 8 68 1.14e-16 75.1
MsG0780039763.01.T01 MTR_3g055070 35.537 121 61 3 236 354 1 106 1.19e-16 77.0
MsG0780039763.01.T01 MTR_4g006840 33.721 258 104 12 11 243 2 217 1.23e-16 79.0
MsG0780039763.01.T01 MTR_6g021880 26.944 360 210 14 20 355 32 362 1.32e-16 80.9
MsG0780039763.01.T01 MTR_3g024150 26.398 322 162 13 11 300 38 316 1.78e-16 80.9
MsG0780039763.01.T01 MTR_4g070550 26.506 332 184 12 8 300 5 315 1.95e-16 80.9
MsG0780039763.01.T01 MTR_6g013270 28.571 364 208 16 2 343 23 356 2.31e-16 80.5
MsG0780039763.01.T01 MTR_3g024110 26.235 324 167 14 8 303 101 380 3.67e-16 80.1
MsG0780039763.01.T01 MTR_5g046280 28.049 246 138 11 140 385 46 252 4.99e-16 77.8
MsG0780039763.01.T01 MTR_4g117850 26.724 348 214 14 8 343 23 341 5.52e-16 79.3
MsG0780039763.01.T01 MTR_7g056373 44.330 97 41 3 2 98 17 100 5.65e-16 74.3
MsG0780039763.01.T01 MTR_4g030880 35.417 192 78 9 168 356 50 198 1.23e-15 79.0
MsG0780039763.01.T01 MTR_4g023440 26.765 340 172 10 2 330 12 285 1.50e-15 77.4
MsG0780039763.01.T01 MTR_2g043420 46.316 95 38 2 4 98 22 103 3.61e-15 73.2
MsG0780039763.01.T01 MTR_3g030240 26.282 312 178 12 3 300 35 308 6.29e-15 75.9
MsG0780039763.01.T01 MTR_1g068835 25.893 224 138 8 141 358 141 342 9.69e-15 75.5
MsG0780039763.01.T01 MTR_8g032390 27.879 330 189 15 8 330 40 327 9.99e-15 75.5
MsG0780039763.01.T01 MTR_3g024040 27.414 321 164 15 14 309 37 313 1.22e-14 75.1
MsG0780039763.01.T01 MTR_3g030320 31.414 191 100 9 126 309 70 236 1.31e-14 74.3
MsG0780039763.01.T01 MTR_8g069515 56.522 69 27 2 4 70 12 79 1.35e-14 72.0
MsG0780039763.01.T01 MTR_3g009300 28.763 299 161 13 11 302 37 290 3.35e-14 73.6
MsG0780039763.01.T01 MTR_3g030250 25.581 301 183 12 8 297 37 307 3.42e-14 73.9
MsG0780039763.01.T01 MTR_4g116330 25.559 313 181 11 8 298 23 305 4.30e-14 73.6
MsG0780039763.01.T01 MTR_0128s0130 62.264 53 19 1 8 60 25 76 4.36e-14 67.4
MsG0780039763.01.T01 MTR_7g060930 51.613 62 30 0 221 282 11 72 5.67e-14 67.0
MsG0780039763.01.T01 MTR_5g070130 26.286 350 194 15 8 328 11 325 5.89e-14 73.2
MsG0780039763.01.T01 MTR_4g006270 25.413 303 174 11 8 295 4 269 5.99e-14 73.2
MsG0780039763.01.T01 MTR_7g058660 33.058 121 61 3 269 382 103 210 1.03e-13 70.1
MsG0780039763.01.T01 MTR_3g083010 27.039 233 129 11 143 358 171 379 1.15e-13 72.4
MsG0780039763.01.T01 MTR_1g097370 31.122 196 117 8 143 335 136 316 1.41e-13 72.4
MsG0780039763.01.T01 MTR_3g006640 25.946 185 105 6 140 306 56 226 3.01e-13 70.1
MsG0780039763.01.T01 MTR_3g010620 26.197 355 185 17 11 336 39 345 3.98e-13 70.5
MsG0780039763.01.T01 MTR_4g063955 34.545 165 90 5 10 157 29 192 4.04e-13 69.3
MsG0780039763.01.T01 MTR_6g460450 65.957 47 16 0 6 52 27 73 4.41e-13 66.6
MsG0780039763.01.T01 MTR_6g007150 29.680 219 125 10 140 351 118 314 8.78e-13 69.3
MsG0780039763.01.T01 MTR_7g057090 59.615 52 20 1 2 52 12 63 8.85e-13 64.7
MsG0780039763.01.T01 MTR_6g027890 31.000 200 100 8 141 331 113 283 1.44e-12 68.6
MsG0780039763.01.T01 MTR_2g025960 25.500 200 122 7 139 334 67 243 1.84e-12 68.2
MsG0780039763.01.T01 MTR_4g013190 51.613 62 30 0 45 106 1 62 1.87e-12 64.3
MsG0780039763.01.T01 MTR_1g056280 30.244 205 109 9 150 339 2 187 2.05e-12 66.2
MsG0780039763.01.T01 MTR_4g108810 31.544 149 89 6 200 348 75 210 5.02e-12 65.9
MsG0780039763.01.T01 MTR_5g070088 24.561 342 179 10 8 302 7 316 5.92e-12 67.0
MsG0780039763.01.T01 MTR_4g109280 25.212 353 197 12 1 330 1 309 6.76e-12 66.6
MsG0780039763.01.T01 MTR_7g056560 58.491 53 21 1 204 255 129 181 6.86e-12 64.7
MsG0780039763.01.T01 MTR_3g083660 29.341 167 88 6 138 302 74 212 9.74e-12 65.5
MsG0780039763.01.T01 MTR_4g116330 26.966 267 150 10 8 249 23 269 1.41e-11 65.5
MsG0780039763.01.T01 MTR_6g014720 25.917 409 229 17 2 388 20 376 1.66e-11 65.5
MsG0780039763.01.T01 MTR_3g436150 31.551 187 94 10 131 304 170 335 1.67e-11 65.9
MsG0780039763.01.T01 MTR_7g066830 31.844 179 86 8 29 185 16 180 3.57e-11 62.4
MsG0780039763.01.T01 MTR_1g055065 28.244 262 136 12 137 385 64 286 3.59e-11 63.9
MsG0780039763.01.T01 MTR_8g013010 25.357 280 170 11 8 268 54 313 3.85e-11 63.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0780039763.01.T01 AT3G23880 26.101 318 180 9 8 300 14 301 4.21e-15 76.6

Find 80 sgRNAs with CRISPR-Local

Find 107 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CATAATCTATTTGAAGATTT+TGG 0.128034 7:+68739415 None:intergenic
GGCGATTTCAATTTCAAATT+TGG 0.136021 7:-68739912 MsG0780039763.01.T01:CDS
GTTATCGTTTCTCTTGATTT+AGG 0.143220 7:-68739627 MsG0780039763.01.T01:CDS
ATATGGCAGATGAAGAAATT+TGG 0.238984 7:-68739477 MsG0780039763.01.T01:CDS
TTATCGTTTCTCTTGATTTA+GGG 0.241108 7:-68739626 MsG0780039763.01.T01:CDS
TTATCTAGTAAATGACTTAT+AGG 0.249943 7:+68740191 None:intergenic
TATGGCAGATGAAGAAATTT+GGG 0.259918 7:-68739476 MsG0780039763.01.T01:CDS
TCTAATATTCTTAACACTAT+AGG 0.262876 7:+68739662 None:intergenic
GTTCCTCTTCGTTTGGACTA+TGG 0.263395 7:-68739762 MsG0780039763.01.T01:CDS
TTTGGACCACTTTCGGAGTA+TGG 0.266117 7:-68739936 MsG0780039763.01.T01:CDS
CCCTGTTGTTCCTCTTCGTT+TGG 0.272243 7:-68739769 MsG0780039763.01.T01:CDS
GAACCAACCGTTGGTGTGTT+GGG 0.282576 7:-68739546 MsG0780039763.01.T01:CDS
ATAGAAGAAGAATCACAAAT+TGG 0.305493 7:-68739230 MsG0780039763.01.T01:CDS
TTCTTACAAGGAAACTGATT+TGG 0.310145 7:-68739502 MsG0780039763.01.T01:CDS
AGGAAACTGATTTGGTTATA+TGG 0.320738 7:-68739494 MsG0780039763.01.T01:CDS
CAATTCAACTGATACTTATA+AGG 0.326988 7:-68739883 MsG0780039763.01.T01:CDS
CTAATATTCTTAACACTATA+GGG 0.341529 7:+68739663 None:intergenic
TTGAAGCAATTATCTATCAT+TGG 0.341763 7:-68739308 MsG0780039763.01.T01:CDS
TGAGGTACTTTCCTTTCTTC+CGG 0.341771 7:-68740420 MsG0780039763.01.T01:CDS
TAAGTTCGAGTGATCATGTT+TGG 0.354838 7:-68739809 MsG0780039763.01.T01:CDS
TATCTAGTAAATGACTTATA+GGG 0.383442 7:+68740192 None:intergenic
GAATCACAAATTGGGTATGT+TGG 0.393615 7:-68739221 MsG0780039763.01.T01:CDS
TCCAAACGAAGAGGAACAAC+AGG 0.401510 7:+68739768 None:intergenic
CCATTGTTTCTTTCTAAAGA+TGG 0.405019 7:-68739363 MsG0780039763.01.T01:CDS
AATCACAAATTGGGTATGTT+GGG 0.414739 7:-68739220 MsG0780039763.01.T01:CDS
ACCTCAGCGATGAGATCGTC+GGG 0.430282 7:+68740437 None:intergenic
AATTTGGGGTTGAAGACTCT+TGG 0.432781 7:-68739461 MsG0780039763.01.T01:CDS
ATCCCCGGAGAGTCACTCTA+TGG 0.451398 7:-68740257 MsG0780039763.01.T01:CDS
TCAAGAGTGTTAGTAAGTCT+TGG 0.455719 7:-68740379 MsG0780039763.01.T01:CDS
TATGGTGGTGTTTACTTAAG+TGG 0.459882 7:-68739720 MsG0780039763.01.T01:CDS
AACCAACCGTTGGTGTGTTG+GGG 0.473449 7:-68739545 MsG0780039763.01.T01:CDS
AGTAAATGACTTATAGGGTA+TGG 0.478730 7:+68740197 None:intergenic
TAGAAGAAGAATCACAAATT+GGG 0.478974 7:-68739229 MsG0780039763.01.T01:CDS
AAGAGGTTTCACCGGAAGAA+AGG 0.481770 7:+68740409 None:intergenic
AGTAAGGATCGTCTAAAAGA+AGG 0.489569 7:+68740156 None:intergenic
TAGTAAGTGACGTGATAGTA+AGG 0.511791 7:+68740140 None:intergenic
GCCTGCAATGACTCCATCGT+TGG 0.512545 7:-68740468 None:intergenic
CATAGTGAAAATAGTGTGTA+TGG 0.514786 7:-68739738 MsG0780039763.01.T01:CDS
CACTATAGGGAAGGTCGTTG+TGG 0.530599 7:+68739676 None:intergenic
AGGTGCAATTTCACGAATGT+GGG 0.532483 7:+68740338 None:intergenic
CCAACGGTTGGTTCTGCAGA+TGG 0.532556 7:+68739555 None:intergenic
CTAAAAGAAGGGAGAATGAC+AGG 0.533693 7:+68740168 None:intergenic
CAATTTCACGAATGTGGGAT+CGG 0.542722 7:+68740343 None:intergenic
ACCAACCGTTGGTGTGTTGG+GGG 0.543587 7:-68739544 MsG0780039763.01.T01:CDS
TCATAAGTAATAGTTCTACT+TGG 0.546022 7:+68739252 None:intergenic
TCGCCTCCATACTCCGAAAG+TGG 0.547934 7:+68739930 None:intergenic
AGAACCAACCGTTGGTGTGT+TGG 0.548095 7:-68739547 MsG0780039763.01.T01:CDS
GTAAGGATCGTCTAAAAGAA+GGG 0.548589 7:+68740157 None:intergenic
AACTGATACTTATAAGGTGG+TGG 0.549120 7:-68739877 MsG0780039763.01.T01:CDS
CGTTTCTCTTGATTTAGGGA+CGG 0.550017 7:-68739622 MsG0780039763.01.T01:CDS
CCTCACTTCACCCTAATCAC+GGG 0.550589 7:-68740293 MsG0780039763.01.T01:CDS
AATCGAAGAAGAGGTTTCAC+CGG 0.552153 7:+68740401 None:intergenic
GAGGTGCAATTTCACGAATG+TGG 0.557018 7:+68740337 None:intergenic
TCCTCACTTCACCCTAATCA+CGG 0.567686 7:-68740294 MsG0780039763.01.T01:CDS
ACTACCATAGAGTGACTCTC+CGG 0.571473 7:+68740253 None:intergenic
TTTGTACTGCTGATCTCTTG+AGG 0.575698 7:+68740318 None:intergenic
CTACCATAGAGTGACTCTCC+GGG 0.576329 7:+68740254 None:intergenic
ACACTCTTGAATCGAAGAAG+AGG 0.586292 7:+68740392 None:intergenic
ATGGCAGATGAAGAAATTTG+GGG 0.601540 7:-68739475 MsG0780039763.01.T01:CDS
GGTATGTTGGGAATCTGCGA+AGG 0.615390 7:-68739208 MsG0780039763.01.T01:CDS
TACCTCAGCGATGAGATCGT+CGG 0.616259 7:+68740436 None:intergenic
GGACCACTTTCGGAGTATGG+AGG 0.625418 7:-68739933 MsG0780039763.01.T01:CDS
TGACCATAGTCCAAACGAAG+AGG 0.626299 7:+68739759 None:intergenic
CCCGTGATTAGGGTGAAGTG+AGG 0.633594 7:+68740293 None:intergenic
TTCAACTGATACTTATAAGG+TGG 0.633695 7:-68739880 MsG0780039763.01.T01:CDS
TATTCTTAACACTATAGGGA+AGG 0.634465 7:+68739667 None:intergenic
CCAACCGTTGGTGTGTTGGG+GGG 0.634599 7:-68739543 MsG0780039763.01.T01:CDS
TTCTTGTTAGTCGATTGTAA+CGG 0.638028 7:+68739850 None:intergenic
CCATCTGCAGAACCAACCGT+TGG 0.642821 7:-68739555 MsG0780039763.01.T01:CDS
CCATCTTTAGAAAGAAACAA+TGG 0.648916 7:+68739363 None:intergenic
TCGGGGAGCAACACCAACGA+TGG 0.649436 7:+68740455 None:intergenic
TAGTGACGATGAATCTGAGA+GGG 0.649929 7:-68740234 MsG0780039763.01.T01:CDS
CTCACTTCACCCTAATCACG+GGG 0.665521 7:-68740292 MsG0780039763.01.T01:CDS
CCCCGACGATCTCATCGCTG+AGG 0.681825 7:-68740438 MsG0780039763.01.T01:CDS
CCAAACGAAGAGGAACAACA+GGG 0.699729 7:+68739769 None:intergenic
AGTGAAAATAGTGTGTATGG+TGG 0.706642 7:-68739735 MsG0780039763.01.T01:CDS
TACCATAGAGTGACTCTCCG+GGG 0.710345 7:+68740255 None:intergenic
GTAGTGACGATGAATCTGAG+AGG 0.711732 7:-68740235 MsG0780039763.01.T01:CDS
CCTCAGCGATGAGATCGTCG+GGG 0.770568 7:+68740438 None:intergenic
GGCACTTCATCAAAACTACG+AGG 0.775587 7:+68739576 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! CTAATATTCTTAACACTATA+GGG + Chr7:68739977-68739996 None:intergenic 20.0%
!! TATCTAGTAAATGACTTATA+GGG + Chr7:68739448-68739467 None:intergenic 20.0%
!! TCTAATATTCTTAACACTAT+AGG + Chr7:68739978-68739997 None:intergenic 20.0%
!! TGTAAGAATAAGAAAAACAA+AGG + Chr7:68740123-68740142 None:intergenic 20.0%
!! TTATCTAGTAAATGACTTAT+AGG + Chr7:68739449-68739468 None:intergenic 20.0%
!!! CATAATCTATTTGAAGATTT+TGG + Chr7:68740225-68740244 None:intergenic 20.0%
!!! GATTTTGGTAACTAATTTTA+AGG + Chr7:68740210-68740229 None:intergenic 20.0%
!!! TTGTTTTTCTTATTCTTACA+AGG - Chr7:68740123-68740142 MsG0780039763.01.T01:intron 20.0%
!!! TTTGGGTATTTTTATGATTT+TGG - Chr7:68739683-68739702 MsG0780039763.01.T01:CDS 20.0%
! ACAACACTATAGGAAAAATT+TGG - Chr7:68739665-68739684 MsG0780039763.01.T01:CDS 25.0%
! AGACTTCTTTAACTCATAAT+GGG - Chr7:68739585-68739604 MsG0780039763.01.T01:CDS 25.0%
! ATAGAAGAAGAATCACAAAT+TGG - Chr7:68740407-68740426 MsG0780039763.01.T01:CDS 25.0%
! CAACACTATAGGAAAAATTT+GGG - Chr7:68739666-68739685 MsG0780039763.01.T01:CDS 25.0%
! CAATTCAACTGATACTTATA+AGG - Chr7:68739754-68739773 MsG0780039763.01.T01:CDS 25.0%
! TAGAAGAAGAATCACAAATT+GGG - Chr7:68740408-68740427 MsG0780039763.01.T01:CDS 25.0%
! TTATCGTTTCTCTTGATTTA+GGG - Chr7:68740011-68740030 MsG0780039763.01.T01:intron 25.0%
! TTGAAGCAATTATCTATCAT+TGG - Chr7:68740329-68740348 MsG0780039763.01.T01:CDS 25.0%
!! TCATAAGTAATAGTTCTACT+TGG + Chr7:68740388-68740407 None:intergenic 25.0%
!!! TTTTGACACTTATTTTCGAT+TGG - Chr7:68740249-68740268 MsG0780039763.01.T01:CDS 25.0%
AATCACAAATTGGGTATGTT+GGG - Chr7:68740417-68740436 MsG0780039763.01.T01:CDS 30.0%
AGTAAATGACTTATAGGGTA+TGG + Chr7:68739443-68739462 None:intergenic 30.0%
ATATGGCAGATGAAGAAATT+TGG - Chr7:68740160-68740179 MsG0780039763.01.T01:CDS 30.0%
CATAGTGAAAATAGTGTGTA+TGG - Chr7:68739899-68739918 MsG0780039763.01.T01:CDS 30.0%
GAGACTTCTTTAACTCATAA+TGG - Chr7:68739584-68739603 MsG0780039763.01.T01:CDS 30.0%
GGCGATTTCAATTTCAAATT+TGG - Chr7:68739725-68739744 MsG0780039763.01.T01:CDS 30.0%
GTTATCGTTTCTCTTGATTT+AGG - Chr7:68740010-68740029 MsG0780039763.01.T01:intron 30.0%
TATGGCAGATGAAGAAATTT+GGG - Chr7:68740161-68740180 MsG0780039763.01.T01:CDS 30.0%
TATTCTTAACACTATAGGGA+AGG + Chr7:68739973-68739992 None:intergenic 30.0%
TTCAACTGATACTTATAAGG+TGG - Chr7:68739757-68739776 MsG0780039763.01.T01:CDS 30.0%
TTCTTACAAGGAAACTGATT+TGG - Chr7:68740135-68740154 MsG0780039763.01.T01:CDS 30.0%
TTCTTGTTAGTCGATTGTAA+CGG + Chr7:68739790-68739809 None:intergenic 30.0%
! CCATCTTTAGAAAGAAACAA+TGG + Chr7:68740277-68740296 None:intergenic 30.0%
! CCATTGTTTCTTTCTAAAGA+TGG - Chr7:68740274-68740293 MsG0780039763.01.T01:CDS 30.0%
! TTATGATTTTGGACCACTTT+CGG - Chr7:68739694-68739713 MsG0780039763.01.T01:CDS 30.0%
!! AGGAAACTGATTTGGTTATA+TGG - Chr7:68740143-68740162 MsG0780039763.01.T01:CDS 30.0%
!! ATAATGGGTATCAAGAGAAT+TGG - Chr7:68739600-68739619 MsG0780039763.01.T01:CDS 30.0%
AACTGATACTTATAAGGTGG+TGG - Chr7:68739760-68739779 MsG0780039763.01.T01:CDS 35.0%
AGTAAGGATCGTCTAAAAGA+AGG + Chr7:68739484-68739503 None:intergenic 35.0%
AGTGAAAATAGTGTGTATGG+TGG - Chr7:68739902-68739921 MsG0780039763.01.T01:CDS 35.0%
ATGGCAGATGAAGAAATTTG+GGG - Chr7:68740162-68740181 MsG0780039763.01.T01:CDS 35.0%
GAATCACAAATTGGGTATGT+TGG - Chr7:68740416-68740435 MsG0780039763.01.T01:CDS 35.0%
GTAAGGATCGTCTAAAAGAA+GGG + Chr7:68739483-68739502 None:intergenic 35.0%
TAAGTTCGAGTGATCATGTT+TGG - Chr7:68739828-68739847 MsG0780039763.01.T01:CDS 35.0%
TAGTAAGTGACGTGATAGTA+AGG + Chr7:68739500-68739519 None:intergenic 35.0%
! ACTTAAGTGGCACTTTTAAC+TGG - Chr7:68739930-68739949 MsG0780039763.01.T01:CDS 35.0%
! CGTATAATTGGTTCATGCAA+TGG - Chr7:68739545-68739564 MsG0780039763.01.T01:CDS 35.0%
! TATGGTGGTGTTTACTTAAG+TGG - Chr7:68739917-68739936 MsG0780039763.01.T01:CDS 35.0%
!! ATGCAATGGATTGATCTGTT+TGG - Chr7:68739559-68739578 MsG0780039763.01.T01:CDS 35.0%
!! TCAAGAGTGTTAGTAAGTCT+TGG - Chr7:68739258-68739277 MsG0780039763.01.T01:CDS 35.0%
AATCGAAGAAGAGGTTTCAC+CGG + Chr7:68739239-68739258 None:intergenic 40.0%
ACACTCTTGAATCGAAGAAG+AGG + Chr7:68739248-68739267 None:intergenic 40.0%
AGGTGCAATTTCACGAATGT+GGG + Chr7:68739302-68739321 None:intergenic 40.0%
ATCCATCAGGACAACACTAT+AGG - Chr7:68739655-68739674 MsG0780039763.01.T01:CDS 40.0%
CAATTTCACGAATGTGGGAT+CGG + Chr7:68739297-68739316 None:intergenic 40.0%
CGTTTCTCTTGATTTAGGGA+CGG - Chr7:68740015-68740034 MsG0780039763.01.T01:intron 40.0%
CTAAAAGAAGGGAGAATGAC+AGG + Chr7:68739472-68739491 None:intergenic 40.0%
GACGTATGCTCTCGTATAAT+TGG - Chr7:68739533-68739552 MsG0780039763.01.T01:CDS 40.0%
TAGTGACGATGAATCTGAGA+GGG - Chr7:68739403-68739422 MsG0780039763.01.T01:CDS 40.0%
TATAGTGTTGTCCTGATGGA+TGG + Chr7:68739656-68739675 None:intergenic 40.0%
TTCCTATAGTGTTGTCCTGA+TGG + Chr7:68739660-68739679 None:intergenic 40.0%
TTTGTACTGCTGATCTCTTG+AGG + Chr7:68739322-68739341 None:intergenic 40.0%
! AATTTGGGGTTGAAGACTCT+TGG - Chr7:68740176-68740195 MsG0780039763.01.T01:CDS 40.0%
! AGAATTGGCGTAGAGAGTAT+TGG - Chr7:68739615-68739634 MsG0780039763.01.T01:CDS 40.0%
! ATAGTGTTGTCCTGATGGAT+GGG + Chr7:68739655-68739674 None:intergenic 40.0%
! TGAGGTACTTTCCTTTCTTC+CGG - Chr7:68739217-68739236 MsG0780039763.01.T01:CDS 40.0%
AAGAGGTTTCACCGGAAGAA+AGG + Chr7:68739231-68739250 None:intergenic 45.0%
ACTACCATAGAGTGACTCTC+CGG + Chr7:68739387-68739406 None:intergenic 45.0%
CCAAACGAAGAGGAACAACA+GGG + Chr7:68739871-68739890 None:intergenic 45.0%
GAGGTGCAATTTCACGAATG+TGG + Chr7:68739303-68739322 None:intergenic 45.0%
GGCACTTCATCAAAACTACG+AGG + Chr7:68740064-68740083 None:intergenic 45.0%
GGGCACGAAAAATTTATCCC+CGG - Chr7:68739365-68739384 MsG0780039763.01.T01:CDS 45.0%
GTAGTGACGATGAATCTGAG+AGG - Chr7:68739402-68739421 MsG0780039763.01.T01:CDS 45.0%
GTTCCTCTTCGTTTGGACTA+TGG - Chr7:68739875-68739894 MsG0780039763.01.T01:CDS 45.0%
TCCAAACGAAGAGGAACAAC+AGG + Chr7:68739872-68739891 None:intergenic 45.0%
TCCTCACTTCACCCTAATCA+CGG - Chr7:68739343-68739362 MsG0780039763.01.T01:CDS 45.0%
TGACCATAGTCCAAACGAAG+AGG + Chr7:68739881-68739900 None:intergenic 45.0%
TTTGGACCACTTTCGGAGTA+TGG - Chr7:68739701-68739720 MsG0780039763.01.T01:CDS 45.0%
! ATTTTTCGTGCCCCGTGATT+AGG + Chr7:68739358-68739377 None:intergenic 45.0%
! TGATGGATGGGTTCCAAACA+CGG + Chr7:68739643-68739662 None:intergenic 45.0%
! TTTTTCGTGCCCCGTGATTA+GGG + Chr7:68739357-68739376 None:intergenic 45.0%
!! GAGAGTATTGGTTCCGTGTT+TGG - Chr7:68739627-68739646 MsG0780039763.01.T01:CDS 45.0%
AACCAACCGTTGGTGTGTTG+GGG - Chr7:68740092-68740111 MsG0780039763.01.T01:intron 50.0%
AGAACCAACCGTTGGTGTGT+TGG - Chr7:68740090-68740109 MsG0780039763.01.T01:intron 50.0%
CACTATAGGGAAGGTCGTTG+TGG + Chr7:68739964-68739983 None:intergenic 50.0%
CCCTGTTGTTCCTCTTCGTT+TGG - Chr7:68739868-68739887 MsG0780039763.01.T01:CDS 50.0%
CCTCACTTCACCCTAATCAC+GGG - Chr7:68739344-68739363 MsG0780039763.01.T01:CDS 50.0%
CTACCATAGAGTGACTCTCC+GGG + Chr7:68739386-68739405 None:intergenic 50.0%
CTCACTTCACCCTAATCACG+GGG - Chr7:68739345-68739364 MsG0780039763.01.T01:CDS 50.0%
GAACCAACCGTTGGTGTGTT+GGG - Chr7:68740091-68740110 MsG0780039763.01.T01:intron 50.0%
GGTATGTTGGGAATCTGCGA+AGG - Chr7:68740429-68740448 MsG0780039763.01.T01:CDS 50.0%
TACCATAGAGTGACTCTCCG+GGG + Chr7:68739385-68739404 None:intergenic 50.0%
TACCTCAGCGATGAGATCGT+CGG + Chr7:68739204-68739223 None:intergenic 50.0%
! GTGTTTGGAACCCATCCATC+AGG - Chr7:68739642-68739661 MsG0780039763.01.T01:CDS 50.0%
ACCAACCGTTGGTGTGTTGG+GGG - Chr7:68740093-68740112 MsG0780039763.01.T01:intron 55.0%
ACCTCAGCGATGAGATCGTC+GGG + Chr7:68739203-68739222 None:intergenic 55.0%
ATCCCCGGAGAGTCACTCTA+TGG - Chr7:68739380-68739399 MsG0780039763.01.T01:CDS 55.0%
CCATCTGCAGAACCAACCGT+TGG - Chr7:68740082-68740101 MsG0780039763.01.T01:intron 55.0%
CCCGTGATTAGGGTGAAGTG+AGG + Chr7:68739347-68739366 None:intergenic 55.0%
GGACCACTTTCGGAGTATGG+AGG - Chr7:68739704-68739723 MsG0780039763.01.T01:CDS 55.0%
TCGCCTCCATACTCCGAAAG+TGG + Chr7:68739710-68739729 None:intergenic 55.0%
!! CCAACGGTTGGTTCTGCAGA+TGG + Chr7:68740085-68740104 None:intergenic 55.0%
CCAACCGTTGGTGTGTTGGG+GGG - Chr7:68740094-68740113 MsG0780039763.01.T01:intron 60.0%
CCTCAGCGATGAGATCGTCG+GGG + Chr7:68739202-68739221 None:intergenic 60.0%
TCGGGGAGCAACACCAACGA+TGG + Chr7:68739185-68739204 None:intergenic 60.0%
CCCCCCAACACACCAACGGT+TGG + Chr7:68740097-68740116 None:intergenic 65.0%
CCCCGACGATCTCATCGCTG+AGG - Chr7:68739199-68739218 MsG0780039763.01.T01:CDS 65.0%
GCAGCCCCCCAACACACCAA+CGG + Chr7:68740101-68740120 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
Chr7 gene 68739176 68740483 68739176 ID=MsG0780039763.01;Name=MsG0780039763.01
Chr7 mRNA 68739176 68740483 68739176 ID=MsG0780039763.01.T01;Parent=MsG0780039763.01;Name=MsG0780039763.01.T01;_AED=0.42;_eAED=0.42;_QI=0|0|0|1|1|1|2|0|388
Chr7 exon 68740124 68740483 68740124 ID=MsG0780039763.01.T01:exon:12147;Parent=MsG0780039763.01.T01
Chr7 exon 68739176 68739982 68739176 ID=MsG0780039763.01.T01:exon:12146;Parent=MsG0780039763.01.T01
Chr7 CDS 68740124 68740483 68740124 ID=MsG0780039763.01.T01:cds;Parent=MsG0780039763.01.T01
Chr7 CDS 68739176 68739982 68739176 ID=MsG0780039763.01.T01:cds;Parent=MsG0780039763.01.T01
Gene Sequence

>MsG0780039763.01.T01

ATGACTCCATCGTTGGTGTTGCTCCCCGACGATCTCATCGCTGAGGTACTTTCCTTTCTTCCGGTGAAACCTCTTCTTCGATTCAAGAGTGTTAGTAAGTCTTGGAAAGCACTCATCTCCGATCCCACATTCGTGAAATTGCACCTCAAGAGATCAGCAGTACAAAATCCTCACTTCACCCTAATCACGGGGCACGAAAAATTTATCCCCGGAGAGTCACTCTATGGTAGTGACGATGAATCTGAGAGGGATTACAATCTCGTTCCATACCCTATAAGTCATTTACTAGATAACCTGTCATTCTCCCTTCTTTTAGACGATCCTTACTATCACGTCACTTACTATCATGTGAACAACGACGAAAAATTTGGGTATTTTTATGATTTTGGACCACTTTCGGAGTATGGAGGCGATTTCAATTTCAAATTTGGTTTCGACAATTCAACTGATACTTATAAGGTGGTGGCGTTCCGTTACAATCGACTAACAAGAAATAGAAATATAAAGATTCTAAGTTCGAGTGATCATGTTTGGAGAGATATTGCATTTTTCCCTGTTGTTCCTCTTCGTTTGGACTATGGTCATAGTGAAAATAGTGTGTATGGTGGTGTTTACTTAAGTGGCACTTTTAACTGGTTAGCTATCCACAACGACCTTCCCTATAGTGTTAAGAATATTAGAGTTGAACATTTTGTTATCGTTTCTCTTGATTTAGGGACGGAGACATACAATCAATATCTGTTGCCTCGTAGTTTTGATGAAGTGCCATCTGCAGAACCAACCGTTGGTGTGTTGGGGGGCTGCCTTTGTTTTTCTTATTCTTACAAGGAAACTGATTTGGTTATATGGCAGATGAAGAAATTTGGGGTTGAAGACTCTTGGTCTCAATTCCTTAAAATTAGTTACCAAAATCTTCAAATAGATTATGACATTTTTGACACTTATTTTCGATTGGTGCCATTGTTTCTTTCTAAAGATGGTGATACATTGATACTTAAAAGCAGTCAAGAATTTGAAGCAATTATCTATCATTGGAAAGATAATAGAGTGCAGAGAACAAAAATTACTCCAAGTAGAACTATTACTTATGATAGAAGAAGAATCACAAATTGGGTATGTTGGGAATCTGCGAAGGATTATGTTGAAAGCTTAGTTCCAATTTTTTGA
Protein sequence

>MsG0780039763.01.T01

MTPSLVLLPDDLIAEVLSFLPVKPLLRFKSVSKSWKALISDPTFVKLHLKRSAVQNPHFTLITGHEKFIPGESLYGSDDESERDYNLVPYPISHLLDNLSFSLLLDDPYYHVTYYHVNNDEKFGYFYDFGPLSEYGGDFNFKFGFDNSTDTYKVVAFRYNRLTRNRNIKILSSSDHVWRDIAFFPVVPLRLDYGHSENSVYGGVYLSGTFNWLAIHNDLPYSVKNIRVEHFVIVSLDLGTETYNQYLLPRSFDEVPSAEPTVGVLGGCLCFSYSYKETDLVIWQMKKFGVEDSWSQFLKISYQNLQIDYDIFDTYFRLVPLFLSKDGDTLILKSSQEFEAIIYHWKDNRVQRTKITPSRTITYDRRRITNWVCWESAKDYVESLVPIF*