AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0480018492.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0480018492.01.T01 MTR_4g013185 72.333 300 59 6 2 283 6 299 1.37e-144 415
MsG0480018492.01.T01 MTR_1g088120 69.930 286 74 5 2 281 6 285 2.22e-131 381
MsG0480018492.01.T01 MTR_4g013175 69.595 296 74 4 2 283 6 299 9.22e-129 375
MsG0480018492.01.T01 MTR_4g008790 57.282 309 83 4 2 283 35 321 1.60e-99 301
MsG0480018492.01.T01 MTR_4g013180 51.342 298 94 8 5 281 10 277 8.34e-87 269
MsG0480018492.01.T01 MTR_7g078840 49.038 312 119 9 1 283 5 305 5.39e-85 263
MsG0480018492.01.T01 MTR_7g077070 48.026 304 124 8 1 283 11 301 2.46e-84 261
MsG0480018492.01.T01 MTR_7g078900 50.000 300 114 9 5 283 11 295 3.59e-83 258
MsG0480018492.01.T01 MTR_7g078860 47.176 301 117 10 2 283 5 282 7.59e-78 244
MsG0480018492.01.T01 MTR_7g078040 46.557 305 118 8 8 283 11 299 2.73e-76 241
MsG0480018492.01.T01 MTR_7g079160 46.688 317 124 12 2 283 4 310 2.31e-74 237
MsG0480018492.01.T01 MTR_7g077970 45.847 301 121 10 6 283 7 288 9.70e-73 231
MsG0480018492.01.T01 MTR_0242s0060 44.262 305 126 10 1 283 4 286 6.00e-69 221
MsG0480018492.01.T01 MTR_0242s0040 44.262 305 126 10 1 283 4 286 6.00e-69 221
MsG0480018492.01.T01 MTR_7g022600 42.509 287 150 8 8 282 25 308 1.67e-63 207
MsG0480018492.01.T01 MTR_7g060940 44.558 294 121 10 2 281 18 283 2.05e-63 206
MsG0480018492.01.T01 MTR_1g029650 46.021 289 119 9 2 278 4 267 7.80e-63 205
MsG0480018492.01.T01 MTR_6g055210 42.105 304 151 9 1 294 17 305 2.06e-62 205
MsG0480018492.01.T01 MTR_7g061090 44.330 291 138 8 2 281 18 295 3.15e-62 204
MsG0480018492.01.T01 MTR_7g057270 41.176 289 149 7 4 283 24 300 5.83e-62 203
MsG0480018492.01.T01 MTR_1g071010 43.262 282 133 9 2 279 11 269 6.34e-62 202
MsG0480018492.01.T01 MTR_0128s0010 43.087 311 157 9 6 312 21 315 8.25e-61 200
MsG0480018492.01.T01 MTR_8g066440 42.612 291 148 10 2 283 19 299 9.73e-61 200
MsG0480018492.01.T01 MTR_7g078940 42.071 309 132 10 8 282 34 329 1.00e-60 200
MsG0480018492.01.T01 MTR_1g442850 42.955 291 125 11 4 281 3 265 1.62e-60 198
MsG0480018492.01.T01 MTR_7g091630 41.319 288 149 6 4 283 30 305 4.18e-60 199
MsG0480018492.01.T01 MTR_7g077990 43.206 287 125 10 8 283 19 278 5.34e-60 198
MsG0480018492.01.T01 MTR_7g062060 39.355 310 137 11 2 283 8 294 4.11e-59 196
MsG0480018492.01.T01 MTR_3g080370 44.000 275 126 9 20 281 35 294 7.21e-59 196
MsG0480018492.01.T01 MTR_3g013470 45.091 275 98 7 25 283 14 251 1.67e-58 193
MsG0480018492.01.T01 MTR_7g037670 42.279 272 111 5 4 270 21 251 6.85e-58 190
MsG0480018492.01.T01 MTR_5g096710 44.815 270 133 8 8 275 25 280 6.96e-58 192
MsG0480018492.01.T01 MTR_7g050520 41.869 289 131 9 5 285 21 280 1.29e-57 191
MsG0480018492.01.T01 MTR_2g043410 41.391 302 134 9 8 293 24 298 2.44e-57 191
MsG0480018492.01.T01 MTR_3g437520 41.554 296 141 9 8 283 25 308 3.18e-57 192
MsG0480018492.01.T01 MTR_7g050480 41.522 289 132 9 5 285 21 280 4.79e-57 190
MsG0480018492.01.T01 MTR_7g056760 41.115 287 135 8 4 276 21 287 5.88e-57 190
MsG0480018492.01.T01 MTR_7g055870 39.490 314 130 10 8 283 15 306 1.30e-56 190
MsG0480018492.01.T01 MTR_3g464500 43.902 287 137 8 2 283 23 290 1.80e-56 189
MsG0480018492.01.T01 MTR_1g015730 42.667 300 117 11 1 283 4 265 2.56e-56 188
MsG0480018492.01.T01 MTR_5g056020 41.722 302 142 12 8 287 19 308 4.80e-56 190
MsG0480018492.01.T01 MTR_7g056290 37.415 294 146 9 8 283 24 297 5.11e-56 188
MsG0480018492.01.T01 MTR_7g055987 42.500 280 128 12 8 283 22 272 9.38e-56 186
MsG0480018492.01.T01 MTR_7g056503 40.878 296 137 12 2 283 17 288 1.73e-55 186
MsG0480018492.01.T01 MTR_4g033495 40.956 293 137 12 2 281 23 292 3.85e-55 186
MsG0480018492.01.T01 MTR_7g055930 39.490 314 130 11 8 283 15 306 4.56e-55 186
MsG0480018492.01.T01 MTR_3g464470 42.553 282 145 7 2 283 3 267 1.26e-54 183
MsG0480018492.01.T01 MTR_0128s0020 42.553 282 128 9 8 279 20 277 1.31e-54 184
MsG0480018492.01.T01 MTR_7g061060 42.756 283 140 10 3 281 10 274 1.57e-54 184
MsG0480018492.01.T01 MTR_7g061050 42.606 284 136 10 3 281 10 271 1.64e-54 183
MsG0480018492.01.T01 MTR_0464s0020 39.865 296 143 9 8 283 25 305 3.61e-54 183
MsG0480018492.01.T01 MTR_7g070830 41.137 299 143 10 8 283 23 311 4.09e-54 183
MsG0480018492.01.T01 MTR_7g056003 39.721 287 143 10 8 283 17 284 4.13e-54 182
MsG0480018492.01.T01 MTR_4g011660 40.193 311 146 10 8 295 21 314 4.62e-54 183
MsG0480018492.01.T01 MTR_4g030830 39.649 285 152 9 3 281 6 276 5.55e-54 182
MsG0480018492.01.T01 MTR_6g016285 40.972 288 140 10 8 281 23 294 7.18e-54 183
MsG0480018492.01.T01 MTR_7g091640 40.000 295 139 10 4 283 33 304 8.85e-54 181
MsG0480018492.01.T01 MTR_4g031020 39.617 313 150 11 2 283 11 315 8.94e-54 182
MsG0480018492.01.T01 MTR_5g069760 38.225 293 140 10 1 283 1 262 1.28e-53 180
MsG0480018492.01.T01 MTR_7g077910 49.321 221 90 10 70 283 5 210 2.15e-53 179
MsG0480018492.01.T01 MTR_7g070880 41.806 299 141 11 8 283 23 311 2.39e-53 181
MsG0480018492.01.T01 MTR_7g060960 41.463 287 101 11 8 285 34 262 3.63e-53 179
MsG0480018492.01.T01 MTR_4g030980 38.535 314 154 10 1 283 10 315 3.72e-53 181
MsG0480018492.01.T01 MTR_2g047892 40.864 301 144 12 2 293 18 293 4.15e-53 180
MsG0480018492.01.T01 MTR_5g069930 36.860 293 149 9 1 283 1 267 4.87e-53 179
MsG0480018492.01.T01 MTR_4g024890 41.053 285 148 8 1 283 5 271 5.48e-53 179
MsG0480018492.01.T01 MTR_7g052150 41.869 289 132 10 2 281 18 279 5.73e-53 179
MsG0480018492.01.T01 MTR_7g056390 36.577 298 151 9 4 283 16 293 5.78e-53 180
MsG0480018492.01.T01 MTR_7g028660 39.000 300 155 7 2 293 7 286 7.25e-53 179
MsG0480018492.01.T01 MTR_7g066850 41.071 280 138 9 8 283 25 281 1.55e-52 180
MsG0480018492.01.T01 MTR_0097s0030 40.893 291 138 11 1 283 9 273 2.31e-52 177
MsG0480018492.01.T01 MTR_2g047240 40.893 291 138 11 1 283 9 273 2.31e-52 177
MsG0480018492.01.T01 MTR_4g030110 41.379 290 148 9 2 283 26 301 2.71e-52 177
MsG0480018492.01.T01 MTR_7g066030 41.195 318 141 11 5 301 20 312 4.59e-52 177
MsG0480018492.01.T01 MTR_0649s0020 39.735 302 150 11 9 299 14 294 6.58e-52 176
MsG0480018492.01.T01 MTR_7g066100 38.411 302 147 9 1 283 6 287 9.36e-52 176
MsG0480018492.01.T01 MTR_2g010920 39.803 304 140 13 6 281 20 308 1.21e-51 177
MsG0480018492.01.T01 MTR_7g066840 39.643 280 142 8 3 276 20 278 2.25e-51 175
MsG0480018492.01.T01 MTR_2g043400 38.832 291 141 7 8 283 25 293 2.82e-51 176
MsG0480018492.01.T01 MTR_7g062100 43.750 272 128 7 8 275 26 276 4.41e-51 174
MsG0480018492.01.T01 MTR_2g010950 38.246 285 151 10 6 281 20 288 7.97e-51 174
MsG0480018492.01.T01 MTR_4g129190 39.731 297 144 12 8 293 8 280 8.12e-51 174
MsG0480018492.01.T01 MTR_7g066010 41.554 296 131 11 5 280 20 293 8.35e-51 173
MsG0480018492.01.T01 MTR_2g047200 38.305 295 150 11 8 293 22 293 8.44e-51 174
MsG0480018492.01.T01 MTR_0707s0020 36.533 323 149 9 5 283 25 335 1.10e-50 175
MsG0480018492.01.T01 MTR_2g047878 39.203 301 130 10 2 295 17 271 1.74e-50 172
MsG0480018492.01.T01 MTR_6g086920 36.533 323 149 9 5 283 37 347 2.21e-50 175
MsG0480018492.01.T01 MTR_7g445750 37.000 300 155 7 2 283 19 302 3.22e-50 170
MsG0480018492.01.T01 MTR_4g019990 38.411 302 159 10 1 293 1 284 3.30e-50 172
MsG0480018492.01.T01 MTR_0128s0070 40.071 282 134 9 8 279 24 280 3.80e-50 172
MsG0480018492.01.T01 MTR_7g056260 39.931 288 136 8 8 283 16 278 6.43e-50 169
MsG0480018492.01.T01 MTR_7g061010 41.786 280 129 9 9 281 25 277 3.74e-49 169
MsG0480018492.01.T01 MTR_7g056200 40.068 292 126 11 1 283 18 269 5.14e-49 169
MsG0480018492.01.T01 MTR_2g010900 38.951 267 140 10 24 281 1 253 7.31e-49 168
MsG0480018492.01.T01 MTR_7g056737 40.141 284 135 10 5 281 21 276 1.19e-48 168
MsG0480018492.01.T01 MTR_7g056570 40.893 291 139 11 1 285 13 276 2.28e-48 168
MsG0480018492.01.T01 MTR_7g055977 39.322 295 148 10 4 293 5 273 2.61e-48 167
MsG0480018492.01.T01 MTR_3g072470 37.793 299 145 11 4 283 17 293 3.05e-48 167
MsG0480018492.01.T01 MTR_7g056797 39.007 282 148 5 4 277 21 286 7.11e-48 166
MsG0480018492.01.T01 MTR_7g056710 40.418 287 135 12 2 281 14 271 3.72e-47 164
MsG0480018492.01.T01 MTR_5g068040 38.644 295 130 10 1 283 11 266 6.49e-47 163
MsG0480018492.01.T01 MTR_7g056170 35.962 317 143 7 2 276 71 369 7.71e-47 165
MsG0480018492.01.T01 MTR_7g056717 38.721 297 143 12 4 293 20 284 8.86e-47 163
MsG0480018492.01.T01 MTR_4g030090 39.493 276 148 10 4 275 12 272 3.27e-45 159
MsG0480018492.01.T01 MTR_7g061100 40.580 276 107 12 3 276 10 230 1.22e-44 155
MsG0480018492.01.T01 MTR_6g092560 38.127 299 148 14 9 294 15 289 1.35e-44 159
MsG0480018492.01.T01 MTR_7g066000 37.063 286 137 11 5 274 24 282 4.42e-44 156
MsG0480018492.01.T01 MTR_4g128320 48.235 170 76 5 119 283 29 191 1.02e-42 149
MsG0480018492.01.T01 MTR_4g034860 38.235 272 126 11 33 283 49 299 1.64e-42 152
MsG0480018492.01.T01 MTR_7g445890 37.415 294 136 10 8 293 18 271 1.74e-41 149
MsG0480018492.01.T01 MTR_5g011350 41.204 216 96 7 70 281 37 225 2.21e-40 142
MsG0480018492.01.T01 MTR_1g047490 34.459 296 145 11 4 293 20 272 5.30e-40 143
MsG0480018492.01.T01 MTR_5g043160 36.842 304 139 14 7 277 51 334 7.03e-40 146
MsG0480018492.01.T01 MTR_7g050490 43.284 201 89 6 5 199 7 188 8.54e-40 139
MsG0480018492.01.T01 MTR_7g066080 36.700 297 153 10 2 283 12 288 2.63e-39 144
MsG0480018492.01.T01 MTR_7g052670 37.294 303 155 11 5 283 20 311 1.29e-38 142
MsG0480018492.01.T01 MTR_5g058620 51.974 152 59 4 138 283 11 154 1.35e-38 139
MsG0480018492.01.T01 MTR_1g058870 51.974 152 59 4 138 283 11 154 1.35e-38 139
MsG0480018492.01.T01 MTR_1g015740 36.184 304 91 12 1 293 3 214 2.30e-38 139
MsG0480018492.01.T01 MTR_7g066060 37.329 292 152 11 5 283 22 295 2.36e-38 143
MsG0480018492.01.T01 MTR_4g024870 38.060 268 144 9 8 268 46 298 2.36e-37 139
MsG0480018492.01.T01 MTR_2g461450 38.028 284 120 13 2 276 14 250 2.59e-37 137
MsG0480018492.01.T01 MTR_7g056820 33.115 305 159 11 2 293 3 275 4.73e-37 137
MsG0480018492.01.T01 MTR_6g017280 35.088 285 155 9 8 283 11 274 5.09e-37 137
MsG0480018492.01.T01 MTR_4g030760 37.975 237 124 8 8 239 75 293 1.54e-36 137
MsG0480018492.01.T01 MTR_7g078050 41.573 178 87 4 1 178 1 161 2.99e-36 131
MsG0480018492.01.T01 MTR_6g017270 39.070 215 111 8 8 210 11 217 7.26e-36 133
MsG0480018492.01.T01 MTR_1g046600 46.023 176 54 7 23 175 69 226 1.85e-35 131
MsG0480018492.01.T01 MTR_4g129160 35.889 287 147 11 9 271 10 283 2.36e-35 132
MsG0480018492.01.T01 MTR_7g035295 34.035 285 130 9 10 283 20 257 4.02e-35 132
MsG0480018492.01.T01 MTR_4g037465 32.517 286 170 8 2 283 17 283 1.79e-34 130
MsG0480018492.01.T01 MTR_2g047895 40.394 203 94 7 93 283 26 213 1.88e-34 129
MsG0480018492.01.T01 MTR_7g056023 34.035 285 126 8 1 280 24 251 3.05e-34 127
MsG0480018492.01.T01 MTR_4g030790 36.765 272 110 11 9 275 22 236 7.08e-34 127
MsG0480018492.01.T01 MTR_7g066040 43.915 189 81 8 99 271 20 199 1.38e-33 124
MsG0480018492.01.T01 MTR_7g113500 40.500 200 99 7 92 283 81 268 3.97e-33 126
MsG0480018492.01.T01 MTR_4g013190 55.285 123 39 3 43 152 1 120 6.82e-33 119
MsG0480018492.01.T01 MTR_8g101940 37.591 274 135 13 8 269 4 253 8.63e-33 125
MsG0480018492.01.T01 MTR_6g065510 45.679 162 62 6 132 283 73 218 1.14e-32 124
MsG0480018492.01.T01 MTR_7g022670 33.101 287 120 13 8 289 25 244 3.85e-32 123
MsG0480018492.01.T01 MTR_1g112010 36.330 267 108 12 28 283 2 217 4.03e-32 122
MsG0480018492.01.T01 MTR_2g437110 37.705 244 125 7 5 228 21 257 4.46e-31 122
MsG0480018492.01.T01 MTR_6g088385 44.512 164 74 4 131 283 53 210 2.13e-30 118
MsG0480018492.01.T01 MTR_7g070440 31.615 291 140 12 3 275 4 253 3.83e-30 118
MsG0480018492.01.T01 MTR_7g009265 37.229 231 115 9 76 295 2 213 7.56e-30 116
MsG0480018492.01.T01 MTR_7g078960 40.394 203 80 10 111 299 1 176 7.84e-30 115
MsG0480018492.01.T01 MTR_7g055830 39.560 182 75 5 126 283 68 238 2.68e-29 115
MsG0480018492.01.T01 MTR_8g030660 35.565 239 107 7 5 207 26 253 3.33e-29 113
MsG0480018492.01.T01 MTR_6g017295 36.744 215 117 6 76 283 12 214 3.87e-29 117
MsG0480018492.01.T01 MTR_2g006360 33.562 292 102 13 2 283 42 251 1.77e-27 110
MsG0480018492.01.T01 MTR_4g107820 31.429 280 144 11 8 279 38 277 2.37e-27 110
MsG0480018492.01.T01 MTR_4g107780 31.429 280 144 11 8 279 38 277 2.37e-27 110
MsG0480018492.01.T01 MTR_4g107820 31.786 280 143 12 8 279 38 277 3.23e-27 110
MsG0480018492.01.T01 MTR_4g107780 31.786 280 143 12 8 279 38 277 3.67e-27 110
MsG0480018492.01.T01 MTR_7g055850 33.913 230 121 9 2 215 8 222 8.93e-27 107
MsG0480018492.01.T01 MTR_2g055970 32.302 291 148 18 5 287 210 459 7.00e-26 108
MsG0480018492.01.T01 MTR_7g066830 37.778 180 90 7 29 203 18 180 7.47e-26 102
MsG0480018492.01.T01 MTR_7g055953 45.669 127 54 3 157 283 90 201 1.78e-25 104
MsG0480018492.01.T01 MTR_4g006840 35.769 260 119 10 9 264 2 217 3.09e-25 102
MsG0480018492.01.T01 MTR_8g467140 31.208 298 154 16 5 293 31 286 3.86e-25 103
MsG0480018492.01.T01 MTR_4g006350 29.286 280 180 6 9 283 497 763 3.96e-25 107
MsG0480018492.01.T01 MTR_2g046900 31.164 292 158 10 3 283 25 284 4.23e-25 104
MsG0480018492.01.T01 MTR_1g097330 30.403 273 143 9 8 274 18 249 1.08e-24 103
MsG0480018492.01.T01 MTR_7g021580 34.956 226 105 10 5 228 32 217 1.26e-24 102
MsG0480018492.01.T01 MTR_7g006360 35.468 203 64 6 8 204 11 152 1.97e-24 101
MsG0480018492.01.T01 MTR_3g007360 32.721 272 140 13 9 270 55 293 2.84e-24 102
MsG0480018492.01.T01 MTR_6g007135 30.070 286 159 11 4 278 24 279 3.77e-24 102
MsG0480018492.01.T01 MTR_3g007410 33.824 272 137 14 9 270 55 293 3.77e-24 102
MsG0480018492.01.T01 MTR_6g017305 42.466 146 70 5 136 275 18 155 5.03e-24 100
MsG0480018492.01.T01 MTR_5g057710 31.879 298 151 14 9 294 49 306 5.63e-24 101
MsG0480018492.01.T01 MTR_1g094210 29.412 289 153 12 2 283 53 297 6.03e-24 102
MsG0480018492.01.T01 MTR_1g050542 29.371 286 153 14 5 285 57 298 6.60e-24 101
MsG0480018492.01.T01 MTR_1g094210 29.412 289 153 12 2 283 53 297 7.06e-24 101
MsG0480018492.01.T01 MTR_2g079810 30.909 275 145 10 1 264 1 241 8.79e-24 99.8
MsG0480018492.01.T01 MTR_3g007330 31.119 286 143 11 9 283 51 293 9.93e-24 100
MsG0480018492.01.T01 MTR_5g011200 31.985 272 141 9 9 270 20 257 1.19e-23 100
MsG0480018492.01.T01 MTR_1g054575 32.197 264 134 15 13 271 59 282 1.54e-23 102
MsG0480018492.01.T01 MTR_4g061340 29.286 280 142 12 9 270 29 270 1.92e-23 100
MsG0480018492.01.T01 MTR_4g063955 36.813 182 101 6 5 180 26 199 2.00e-23 98.2
MsG0480018492.01.T01 MTR_0267s0050 31.408 277 169 10 1 270 1 263 3.09e-23 99.8
MsG0480018492.01.T01 MTR_3g014540 29.856 278 138 11 9 270 32 268 4.87e-23 99.0
MsG0480018492.01.T01 MTR_2g021150 31.148 305 149 15 5 293 13 272 8.51e-23 98.2
MsG0480018492.01.T01 MTR_7g022580 44.248 113 52 3 46 158 2 103 9.76e-23 93.6
MsG0480018492.01.T01 MTR_3g009240 29.091 275 148 9 9 274 39 275 9.79e-23 98.2
MsG0480018492.01.T01 MTR_1g097560 30.137 292 148 16 8 293 38 279 1.02e-22 97.8
MsG0480018492.01.T01 MTR_4g024910 39.634 164 88 5 24 186 1 154 1.27e-22 97.1
MsG0480018492.01.T01 MTR_5g057790 31.864 295 155 14 9 294 49 306 1.89e-22 97.4
MsG0480018492.01.T01 MTR_2g027820 28.846 260 112 7 24 283 1 187 2.45e-22 95.9
MsG0480018492.01.T01 MTR_6g065980 29.818 275 136 11 9 275 19 244 3.16e-22 96.3
MsG0480018492.01.T01 MTR_7g013590 32.808 317 140 17 9 297 39 310 3.39e-22 96.7
MsG0480018492.01.T01 MTR_7g070937 42.537 134 67 5 155 283 10 138 4.53e-22 91.7
MsG0480018492.01.T01 MTR_5g022420 30.435 276 139 12 5 273 26 255 5.00e-22 95.9
MsG0480018492.01.T01 MTR_2g078900 30.112 269 140 10 9 270 36 263 7.23e-22 95.1
MsG0480018492.01.T01 MTR_2g043420 42.609 115 66 0 2 116 22 136 8.53e-22 90.9
MsG0480018492.01.T01 MTR_2g046920 27.931 290 159 11 3 283 21 269 9.41e-22 95.1
MsG0480018492.01.T01 MTR_7g070900 44.615 130 62 6 154 278 234 358 1.56e-21 95.5
MsG0480018492.01.T01 MTR_7g070900 32.018 228 98 6 4 219 13 195 3.33e-20 91.7
MsG0480018492.01.T01 MTR_3g036290 29.259 270 146 9 9 274 25 253 1.59e-21 94.4
MsG0480018492.01.T01 MTR_0064s0060 42.593 108 62 0 4 111 15 122 1.64e-21 89.4
MsG0480018492.01.T01 MTR_2g046800 28.716 296 146 12 8 271 16 278 2.25e-21 94.4
MsG0480018492.01.T01 MTR_3g013950 30.742 283 165 12 1 270 1 265 2.41e-21 94.4
MsG0480018492.01.T01 MTR_3g006530 30.961 281 134 13 9 270 43 282 2.85e-21 94.0
MsG0480018492.01.T01 MTR_3g011060 29.078 282 145 11 9 270 31 277 3.26e-21 94.0
MsG0480018492.01.T01 MTR_3g009310 31.522 276 141 10 9 273 45 283 3.94e-21 93.6
MsG0480018492.01.T01 MTR_2g029990 29.520 271 145 11 9 270 54 287 4.32e-21 93.6
MsG0480018492.01.T01 MTR_8g062660 28.254 315 132 12 2 277 18 277 4.64e-21 94.7
MsG0480018492.01.T01 MTR_3g011100 31.183 279 141 13 9 271 238 481 6.03e-21 94.4
MsG0480018492.01.T01 MTR_2g021190 31.071 280 144 13 9 277 24 265 8.65e-21 92.4
MsG0480018492.01.T01 MTR_3g007270 28.777 278 153 9 9 270 50 298 1.06e-20 92.4
MsG0480018492.01.T01 MTR_4g053510 39.450 109 65 1 4 112 20 127 1.10e-20 86.7
MsG0480018492.01.T01 MTR_6g081280 42.857 126 65 4 152 276 13 132 1.32e-20 89.7
MsG0480018492.01.T01 MTR_3g014570 29.496 278 139 11 9 270 32 268 1.84e-20 91.7
MsG0480018492.01.T01 MTR_8g101580 29.964 277 141 15 10 274 50 285 1.91e-20 91.7
MsG0480018492.01.T01 MTR_3g013770 28.623 276 149 8 9 270 36 277 2.69e-20 91.3
MsG0480018492.01.T01 MTR_7g056173 41.176 136 63 5 152 280 22 147 3.15e-20 90.1
MsG0480018492.01.T01 MTR_7g407070 28.014 282 152 9 9 270 35 285 6.86e-20 90.1
MsG0480018492.01.T01 MTR_4g108820 29.286 280 123 11 5 279 41 250 8.45e-20 89.0
MsG0480018492.01.T01 MTR_6g027910 32.042 284 140 14 9 270 12 264 1.23e-19 89.4
MsG0480018492.01.T01 MTR_6g004660 29.592 294 167 12 10 293 20 283 1.52e-19 89.0
MsG0480018492.01.T01 MTR_2g046830 30.325 277 145 11 3 271 22 258 1.63e-19 89.0
MsG0480018492.01.T01 MTR_5g057690 29.530 298 144 13 9 293 49 293 1.69e-19 89.0
MsG0480018492.01.T01 MTR_3g030310 28.467 274 151 9 9 270 24 264 2.16e-19 88.6
MsG0480018492.01.T01 MTR_3g006570 27.306 271 149 10 9 270 24 255 2.36e-19 88.6
MsG0480018492.01.T01 MTR_3g058480 32.759 232 130 9 9 229 42 258 2.42e-19 87.8
MsG0480018492.01.T01 MTR_1g055070 29.720 286 143 11 9 270 52 303 2.66e-19 88.2
MsG0480018492.01.T01 MTR_3g013740 28.873 284 146 12 9 270 47 296 3.69e-19 88.2
MsG0480018492.01.T01 MTR_3g006670 28.417 278 145 13 9 270 52 291 4.27e-19 87.8
MsG0480018492.01.T01 MTR_2g047832 29.720 286 155 13 3 271 26 282 6.21e-19 87.4
MsG0480018492.01.T01 MTR_8g073550 29.208 202 122 4 5 200 29 215 6.36e-19 84.7
MsG0480018492.01.T01 MTR_3g024150 28.986 276 143 11 9 275 38 269 7.17e-19 87.0
MsG0480018492.01.T01 MTR_6g460450 42.609 115 63 2 2 114 25 138 8.79e-19 82.0
MsG0480018492.01.T01 MTR_3g007430 28.727 275 146 12 9 270 46 283 1.31e-18 86.3
MsG0480018492.01.T01 MTR_5g070380 37.719 114 65 3 33 146 43 150 1.33e-18 82.8
MsG0480018492.01.T01 MTR_6g053260 33.624 229 126 9 9 229 340 550 1.46e-18 87.0
MsG0480018492.01.T01 MTR_0044s0300 26.909 275 158 10 9 276 41 279 2.18e-18 85.9
MsG0480018492.01.T01 MTR_4g053470 27.018 285 147 8 4 283 20 248 2.37e-18 84.7
MsG0480018492.01.T01 MTR_1g055055 28.571 273 137 11 9 274 29 250 2.41e-18 85.1
MsG0480018492.01.T01 MTR_4g031770 29.329 283 140 12 9 275 7 245 2.71e-18 85.1
MsG0480018492.01.T01 MTR_2g021155 27.599 279 139 9 9 270 39 271 3.25e-18 86.3
MsG0480018492.01.T01 MTR_8g069515 34.969 163 72 8 6 150 16 162 3.55e-18 81.6
MsG0480018492.01.T01 MTR_1g054725 32.734 278 134 18 9 270 23 263 3.78e-18 84.7
MsG0480018492.01.T01 MTR_7g078880 41.525 118 61 4 170 284 93 205 3.89e-18 85.1
MsG0480018492.01.T01 MTR_7g078880 44.444 99 35 2 4 101 7 86 1.48e-13 71.2
MsG0480018492.01.T01 MTR_2g078850 28.996 269 149 12 9 270 33 266 4.66e-18 84.7
MsG0480018492.01.T01 MTR_7g056723 37.107 159 76 7 80 231 10 151 4.89e-18 80.9
MsG0480018492.01.T01 MTR_6g021880 29.119 261 151 11 18 270 32 266 9.11e-18 84.0
MsG0480018492.01.T01 MTR_2g028130 28.387 310 173 12 4 293 3 283 1.07e-17 84.0
MsG0480018492.01.T01 MTR_6g004210 31.227 269 152 13 19 270 38 290 1.33e-17 83.6
MsG0480018492.01.T01 MTR_3g436150 28.571 280 149 12 9 270 35 281 1.44e-17 83.2
MsG0480018492.01.T01 MTR_3g058470 34.123 211 117 9 9 208 40 239 1.86e-17 82.8
MsG0480018492.01.T01 MTR_6g053240 31.967 244 123 12 9 233 31 250 2.54e-17 82.8
MsG0480018492.01.T01 MTR_2g021252 29.299 314 154 16 9 310 50 307 2.94e-17 82.4
MsG0480018492.01.T01 MTR_3g058440 30.182 275 148 14 9 273 38 278 3.07e-17 81.3
MsG0480018492.01.T01 MTR_7g056727 42.754 138 63 6 46 174 3 133 3.27e-17 80.1
MsG0480018492.01.T01 MTR_6g048120 29.448 326 171 17 9 316 39 323 5.67e-17 81.6
MsG0480018492.01.T01 MTR_0760s0010 29.787 282 132 12 11 278 52 281 7.48e-17 81.3
MsG0480018492.01.T01 MTR_3g083640 29.520 271 142 9 9 270 58 288 8.11e-17 81.3
MsG0480018492.01.T01 MTR_5g046300 28.253 269 147 12 9 270 7 236 8.70e-17 80.5
MsG0480018492.01.T01 MTR_5g046290 28.253 269 147 12 9 270 7 236 8.70e-17 80.5
MsG0480018492.01.T01 MTR_5g057040 27.300 337 186 16 9 328 49 343 8.70e-17 82.0
MsG0480018492.01.T01 MTR_5g057643 33.333 201 108 10 9 201 49 231 9.08e-17 79.3
MsG0480018492.01.T01 MTR_1g055135 31.837 245 126 10 5 234 12 230 9.10e-17 80.9
MsG0480018492.01.T01 MTR_7g077930 54.098 61 28 0 8 68 21 81 1.27e-16 74.7
MsG0480018492.01.T01 MTR_3g036430 27.612 268 125 7 9 270 23 227 1.32e-16 80.1
MsG0480018492.01.T01 MTR_3g103020 28.000 275 152 8 9 274 23 260 1.60e-16 80.1
MsG0480018492.01.T01 MTR_3g010590 27.698 278 138 10 9 275 42 267 1.96e-16 80.1
MsG0480018492.01.T01 MTR_5g057020 29.851 268 134 11 9 270 49 268 2.26e-16 79.3
MsG0480018492.01.T01 MTR_1g097490 29.304 273 145 11 9 274 52 283 3.54e-16 79.3
MsG0480018492.01.T01 MTR_7g007300 30.000 270 135 11 9 270 106 329 4.27e-16 79.3
MsG0480018492.01.T01 MTR_1g055375 28.344 314 176 13 9 310 7 283 4.67e-16 78.6
MsG0480018492.01.T01 MTR_5g070130 29.268 246 141 8 2 234 7 232 6.46e-16 78.6
MsG0480018492.01.T01 MTR_1g056710 30.249 281 132 15 9 270 37 272 6.68e-16 78.6
MsG0480018492.01.T01 MTR_2g028160 27.986 293 153 12 9 275 8 268 7.93e-16 78.2
MsG0480018492.01.T01 MTR_4g070550 27.491 291 155 11 9 275 8 266 8.40e-16 78.2
MsG0480018492.01.T01 MTR_8g099460 27.915 283 144 12 9 270 8 251 8.96e-16 78.2
MsG0480018492.01.T01 MTR_3g010970 27.941 272 136 9 9 270 51 272 1.19e-15 77.8
MsG0480018492.01.T01 MTR_3g007300 28.832 274 113 15 9 269 52 256 1.57e-15 77.0
MsG0480018492.01.T01 MTR_3g024110 26.642 274 153 9 9 277 104 334 1.70e-15 77.4
MsG0480018492.01.T01 MTR_2g028140 27.304 293 159 10 9 275 8 272 1.80e-15 77.4
MsG0480018492.01.T01 MTR_3g023930 28.571 273 139 11 9 276 37 258 2.04e-15 76.6
MsG0480018492.01.T01 MTR_4g023070 26.198 313 178 10 9 310 6 276 2.58e-15 76.6
MsG0480018492.01.T01 MTR_1g037540 27.234 235 125 9 4 206 3 223 3.18e-15 76.6
MsG0480018492.01.T01 MTR_5g070080 27.273 253 133 9 9 233 13 242 3.37e-15 76.3
MsG0480018492.01.T01 MTR_2g426060 30.864 243 122 12 9 228 9 228 3.48e-15 76.3
MsG0480018492.01.T01 MTR_2g021210 31.250 224 124 8 9 229 87 283 4.66e-15 76.3
MsG0480018492.01.T01 MTR_3g030250 25.735 272 149 10 9 272 40 266 4.79e-15 75.9
MsG0480018492.01.T01 MTR_3g034180 24.746 295 155 9 5 274 122 374 5.26e-15 76.3
MsG0480018492.01.T01 MTR_4g023120 26.814 317 175 13 9 312 6 278 5.94e-15 75.5
MsG0480018492.01.T01 MTR_3g030350 28.519 270 144 13 9 270 38 266 7.69e-15 75.1
MsG0480018492.01.T01 MTR_4g133170 26.481 287 141 12 9 274 7 244 1.55e-14 74.3
MsG0480018492.01.T01 MTR_3g030330 28.261 276 144 10 9 275 23 253 1.91e-14 73.9
MsG0480018492.01.T01 MTR_1g058760 51.351 74 25 2 4 66 9 82 2.50e-14 67.8
MsG0480018492.01.T01 MTR_7g056373 41.772 79 43 2 8 84 24 101 2.96e-14 68.9
MsG0480018492.01.T01 MTR_3g034130 26.174 298 159 12 5 282 8 264 3.12e-14 73.2
MsG0480018492.01.T01 MTR_3g083010 29.317 249 131 11 9 229 9 240 3.29e-14 73.6
MsG0480018492.01.T01 MTR_5g070088 27.799 259 145 9 2 236 3 243 3.95e-14 73.2
MsG0480018492.01.T01 MTR_3g010390 27.018 285 146 12 9 270 36 281 3.96e-14 73.2
MsG0480018492.01.T01 MTR_2g010935 38.525 122 44 3 162 282 43 134 3.98e-14 71.6
MsG0480018492.01.T01 MTR_1g068875 27.368 285 144 10 9 277 7 244 4.93e-14 72.8
MsG0480018492.01.T01 MTR_6g048140 28.622 283 135 15 9 270 42 278 5.58e-14 72.8
MsG0480018492.01.T01 MTR_8g013010 29.876 241 132 12 9 236 57 273 6.08e-14 72.0
MsG0480018492.01.T01 MTR_7g034310 40.323 124 57 5 157 280 17 123 6.73e-14 70.5
MsG0480018492.01.T01 MTR_3g024040 27.551 294 158 13 12 299 37 281 7.72e-14 72.0
MsG0480018492.01.T01 MTR_3g010520 26.866 268 138 10 9 270 28 243 8.06e-14 72.0
MsG0480018492.01.T01 MTR_2g025420 26.791 321 176 12 1 293 1 290 9.00e-14 72.0
MsG0480018492.01.T01 MTR_4g023090 25.786 318 181 10 5 310 15 289 1.03e-13 72.0
MsG0480018492.01.T01 MTR_3g006500 25.818 275 153 10 9 272 20 254 1.13e-13 71.6
MsG0480018492.01.T01 MTR_2g425980 30.165 242 125 12 9 228 8 227 1.19e-13 71.6
MsG0480018492.01.T01 MTR_2g426090 30.417 240 129 11 9 228 9 230 1.38e-13 71.6
MsG0480018492.01.T01 MTR_5g007610 26.263 297 149 13 9 277 44 298 1.41e-13 71.6
MsG0480018492.01.T01 MTR_3g030240 26.182 275 147 11 9 276 43 268 1.67e-13 71.2
MsG0480018492.01.T01 MTR_3g036335 27.778 270 154 13 9 270 44 280 2.18e-13 70.9
MsG0480018492.01.T01 MTR_5g069950 28.931 159 73 5 131 283 33 157 2.22e-13 68.9
MsG0480018492.01.T01 MTR_7g061940 41.071 112 48 3 159 270 79 172 2.34e-13 69.7
MsG0480018492.01.T01 MTR_2g048580 26.449 276 150 10 4 274 6 233 2.79e-13 70.1
MsG0480018492.01.T01 MTR_2g060555 30.481 187 76 8 125 293 38 188 3.49e-13 69.3
MsG0480018492.01.T01 MTR_1g068835 26.761 284 148 12 9 277 7 245 3.89e-13 70.1
MsG0480018492.01.T01 MTR_1g023400 29.137 278 138 14 9 270 6 240 5.91e-13 69.3
MsG0480018492.01.T01 MTR_1g100763 27.757 263 125 10 12 270 4 205 7.69e-13 68.6
MsG0480018492.01.T01 MTR_3g010870 26.596 282 143 15 9 275 40 272 8.24e-13 68.9
MsG0480018492.01.T01 MTR_4g116330 28.352 261 131 12 9 249 26 250 1.02e-12 68.6
MsG0480018492.01.T01 MTR_3g023940 26.855 283 149 11 9 275 37 277 1.02e-12 68.9
MsG0480018492.01.T01 MTR_4g116330 27.368 285 136 13 9 273 26 259 1.15e-12 68.6
MsG0480018492.01.T01 MTR_5g046260 24.889 225 127 9 9 229 7 193 1.34e-12 67.8
MsG0480018492.01.T01 MTR_4g117850 29.502 261 140 13 9 256 26 255 1.37e-12 68.6
MsG0480018492.01.T01 MTR_4g122850 28.632 234 129 9 18 236 13 223 1.94e-12 68.2
MsG0480018492.01.T01 MTR_3g010920 29.044 272 137 14 9 275 47 267 2.08e-12 67.8
MsG0480018492.01.T01 MTR_7g061012 44.048 84 43 3 36 117 4 85 2.21e-12 65.1
MsG0480018492.01.T01 MTR_7g067680 25.735 272 134 9 9 270 52 265 2.60e-12 67.8
MsG0480018492.01.T01 MTR_8g433040 31.100 209 99 9 9 201 21 200 3.25e-12 67.4
MsG0480018492.01.T01 MTR_8g032380 31.100 209 99 9 9 201 21 200 3.25e-12 67.4
MsG0480018492.01.T01 MTR_4g118380 29.707 239 124 12 19 236 21 236 3.45e-12 67.0
MsG0480018492.01.T01 MTR_0667s0010 26.102 295 165 12 1 280 1 257 4.23e-12 67.0
MsG0480018492.01.T01 MTR_4g020000 41.905 105 51 3 155 257 111 207 4.49e-12 66.6
MsG0480018492.01.T01 MTR_3g034160 24.828 290 161 9 5 274 8 260 4.74e-12 66.6
MsG0480018492.01.T01 MTR_6g060650 26.812 276 155 10 19 282 21 261 5.86e-12 66.6
MsG0480018492.01.T01 MTR_3g010450 29.044 272 133 14 12 273 3 224 6.78e-12 65.1
MsG0480018492.01.T01 MTR_3g010620 27.391 230 127 10 9 229 39 237 7.29e-12 66.2
MsG0480018492.01.T01 MTR_2g426020 27.237 257 137 12 1 232 1 232 7.45e-12 66.2
MsG0480018492.01.T01 MTR_2g021050 30.244 205 113 8 9 211 8 184 8.46e-12 66.2
MsG0480018492.01.T01 MTR_1g068860 28.085 235 124 10 9 228 7 211 8.90e-12 65.9
MsG0480018492.01.T01 MTR_4g121580 27.907 215 116 9 3 200 8 200 9.67e-12 65.9
MsG0480018492.01.T01 MTR_2g426070 29.762 252 119 13 9 228 9 234 1.18e-11 65.9
MsG0480018492.01.T01 MTR_3g010430 26.923 286 155 13 9 274 39 290 1.43e-11 65.5
MsG0480018492.01.T01 MTR_4g089125 48.333 60 30 1 2 61 8 66 1.86e-11 60.5
MsG0480018492.01.T01 MTR_4g023080 26.335 281 147 12 5 274 8 239 2.26e-11 64.7
MsG0480018492.01.T01 MTR_2g024110 25.368 272 150 11 9 270 7 235 2.38e-11 64.7
MsG0480018492.01.T01 MTR_2g022170 35.075 134 61 4 9 142 7 114 2.54e-11 61.2
MsG0480018492.01.T01 MTR_4g021785 27.240 279 150 13 5 275 8 241 2.65e-11 64.3
MsG0480018492.01.T01 MTR_4g117780 28.936 235 131 9 9 234 14 221 3.56e-11 63.9
MsG0480018492.01.T01 MTR_3g009290 26.909 275 127 11 9 264 38 257 3.70e-11 63.2
MsG0480018492.01.T01 MTR_5g097210 27.686 242 137 9 5 234 8 223 4.12e-11 63.9
MsG0480018492.01.T01 MTR_6g013270 27.341 267 160 11 9 270 32 269 5.13e-11 63.5
MsG0480018492.01.T01 MTR_3g010870 26.923 234 121 13 9 227 40 238 5.55e-11 63.2
MsG0480018492.01.T01 MTR_4g023380 25.714 280 135 9 20 285 30 250 5.92e-11 63.5
MsG0480018492.01.T01 MTR_4g023440 27.132 258 148 10 5 249 17 247 6.28e-11 63.2
MsG0480018492.01.T01 MTR_2g031720 25.000 284 156 9 1 270 1 241 6.84e-11 63.2
MsG0480018492.01.T01 MTR_7g091610 40.000 105 52 4 191 293 44 139 7.14e-11 62.0
MsG0480018492.01.T01 MTR_2g031700 26.446 242 133 9 1 230 1 209 9.31e-11 62.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0480018492.01.T01 AT3G23880 28.821 229 130 7 9 226 17 223 9.81e-16 77.8
MsG0480018492.01.T01 AT1G33530 28.102 274 143 10 8 276 99 323 1.67e-11 65.5
MsG0480018492.01.T01 AT2G16220 27.138 269 163 11 1 264 1 241 2.80e-11 64.7

Find 73 sgRNAs with CRISPR-Local

Find 109 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CGTGGTTTCGTCTTCAATTT+TGG 0.131051 4:-5737391 MsG0480018492.01.T01:CDS
GAGATGGAATTTCACGAAAT+TGG 0.158889 4:+5737729 None:intergenic
TGTTATTGTTTCACTTGATT+TGG 0.216403 4:-5737092 MsG0480018492.01.T01:CDS
CATATTGATGTGTTTCTTAA+TGG 0.253455 4:-5737202 MsG0480018492.01.T01:CDS
TTCTTAATGGCAGGCTTAAC+TGG 0.261478 4:-5737189 MsG0480018492.01.T01:CDS
GTGATTACTGGCTCCGTATA+TGG 0.288331 4:-5737462 MsG0480018492.01.T01:CDS
CAAAACAATTGATCTTGCTT+TGG 0.289348 4:+5736283 None:intergenic
CATTTCAGATGCTTCATTCA+TGG 0.310922 4:-5736352 MsG0480018492.01.T01:CDS
AAAACAATTGATCTTGCTTT+GGG 0.322351 4:+5736284 None:intergenic
GTTATTGTTTCACTTGATTT+GGG 0.331532 4:-5737091 MsG0480018492.01.T01:CDS
AGATGGAATTTCACGAAATT+GGG 0.345963 4:+5737730 None:intergenic
AGTAAACGAGGTATAGGATA+TGG 0.361499 4:+5737628 None:intergenic
TGCAAAGGAAAAGGAAGAAC+CGG 0.364378 4:+5737241 None:intergenic
TCAGTTTAGGGGATAATGTT+TGG 0.366420 4:-5737282 MsG0480018492.01.T01:CDS
CTAATCACTCAGTATGAGTA+TGG 0.378030 4:-5737673 MsG0480018492.01.T01:CDS
CAAACAGATCAACCCGTTAC+AGG 0.379382 4:+5737528 None:intergenic
ATGATTATGAGTGTGATTAC+TGG 0.379401 4:-5737474 MsG0480018492.01.T01:CDS
CACCGCCGGATCATTATAAT+AGG 0.381134 4:+5737138 None:intergenic
CTTTGCATTATGATAGACTT+TGG 0.394741 4:-5737225 MsG0480018492.01.T01:CDS
TAGTGGCTGGGTTCCATATA+CGG 0.402234 4:+5737449 None:intergenic
GAGAAACATTGAAAGTTTCC+CGG 0.410829 4:-5737260 MsG0480018492.01.T01:CDS
GATACATGCAACCACACAAC+TGG 0.438231 4:+5737007 None:intergenic
ATATAGCTGGTTCCTGTAAC+GGG 0.441421 4:-5737540 MsG0480018492.01.T01:CDS
TCAAATGTGTAAGTAATCCT+TGG 0.442326 4:-5737771 MsG0480018492.01.T01:CDS
CATATAGCTGGTTCCTGTAA+CGG 0.447969 4:-5737541 MsG0480018492.01.T01:CDS
TATAGGATATGGAATGATAC+TGG 0.455344 4:+5737639 None:intergenic
TTGATTACATGTATGCCTAA+AGG 0.456192 4:-5736251 None:intergenic
TTATCGAGTAAACGAGGTAT+AGG 0.462047 4:+5737622 None:intergenic
TTGATGTGTTTCTTAATGGC+AGG 0.467959 4:-5737198 MsG0480018492.01.T01:CDS
AGATGCTTCATTCATGGAAG+AGG 0.478896 4:-5736346 MsG0480018492.01.T01:CDS
GATCATTATAATAGGTGATC+GGG 0.481333 4:+5737146 None:intergenic
CTATCATAATGCAAAGGAAA+AGG 0.498332 4:+5737232 None:intergenic
TAATGGCAGGCTTAACTGGT+TGG 0.499134 4:-5737185 MsG0480018492.01.T01:CDS
AAAGATTGCTCTCATATAGC+TGG 0.505549 4:-5737553 MsG0480018492.01.T01:CDS
CCATCAGTATCGGTTGCCTA+GGG 0.511039 4:-5737056 MsG0480018492.01.T01:CDS
GGAGATATTATACAGGAGAA+TGG 0.519760 4:-5736312 MsG0480018492.01.T01:CDS
ACCATCAGTATCGGTTGCCT+AGG 0.522764 4:-5737057 MsG0480018492.01.T01:CDS
CGATGTTGGAGATATTATAC+AGG 0.526413 4:-5736319 MsG0480018492.01.T01:CDS
TTTGGCTGTGATAATTCCAC+TGG 0.526851 4:-5737373 MsG0480018492.01.T01:CDS
TTATAATGATCCGGCGGTGA+AGG 0.527766 4:-5737134 MsG0480018492.01.T01:CDS
ATGGAAGAGGAAAACGATGT+TGG 0.531219 4:-5736333 MsG0480018492.01.T01:CDS
GATCACCTATTATAATGATC+CGG 0.543531 4:-5737143 MsG0480018492.01.T01:CDS
TCAGCAACAAGGGTAAAAGA+AGG 0.551448 4:+5737598 None:intergenic
GGATCATTATAATAGGTGAT+CGG 0.556497 4:+5737145 None:intergenic
AACGGGTTGATCTGTTTGAC+TGG 0.563020 4:-5737523 MsG0480018492.01.T01:CDS
GTGGTTGCATGTATCAATAA+AGG 0.570300 4:-5736999 MsG0480018492.01.T01:intron
AAACGAAGAAGTGATTTCAC+AGG 0.571861 4:+5737793 None:intergenic
GAATTTCACGAAATTGGGAT+CGG 0.574210 4:+5737735 None:intergenic
GGAGAAGAACGCCCGCGACA+TGG 0.584898 4:+5737849 None:intergenic
GTATATGGAACCCAGCCACT+AGG 0.585863 4:-5737447 MsG0480018492.01.T01:CDS
TGAGTGATTAGTTTGAATTG+TGG 0.590892 4:+5737685 None:intergenic
GAGAGTGAGGATCAGCAACA+AGG 0.595003 4:+5737587 None:intergenic
CTGAGACATACCATCAGTAT+CGG 0.596123 4:-5737066 MsG0480018492.01.T01:CDS
CATACAATCAGCCATGTCGC+GGG 0.601841 4:-5737860 None:intergenic
AGAGTGAGGATCAGCAACAA+GGG 0.603277 4:+5737588 None:intergenic
TCATACAATCAGCCATGTCG+CGG 0.612187 4:-5737861 None:intergenic
CAGCAACAAGGGTAAAAGAA+GGG 0.615329 4:+5737599 None:intergenic
ATTTCACAGGAAGTAATGAA+AGG 0.617690 4:+5737806 None:intergenic
ACAGTAATATCCTTCACCGC+CGG 0.627048 4:+5737124 None:intergenic
TAAACTGAAAACTCTCACAT+CGG 0.628181 4:+5737297 None:intergenic
CAAAGTCTATCATAATGCAA+AGG 0.636014 4:+5737226 None:intergenic
GAACTCTGTGAGGAGATCGT+CGG 0.638698 4:+5737828 None:intergenic
GCAAAGGAAAAGGAAGAACC+GGG 0.644840 4:+5737242 None:intergenic
CCCTAGGCAACCGATACTGA+TGG 0.652040 4:+5737056 None:intergenic
CGCATGTGGAGCCAGTTGTG+TGG 0.658385 4:-5737018 MsG0480018492.01.T01:CDS
CATCAGTATCGGTTGCCTAG+GGG 0.667162 4:-5737055 MsG0480018492.01.T01:CDS
TCGGAAATGAGAGTGTTCCA+AGG 0.672213 4:+5737754 None:intergenic
TTATGATGAGATGTCGCATG+TGG 0.672397 4:-5737032 MsG0480018492.01.T01:CDS
GACATCTCATCATAACCCCT+AGG 0.681472 4:+5737040 None:intergenic
CACCTATTATAATGATCCGG+CGG 0.684379 4:-5737140 MsG0480018492.01.T01:CDS
AACCACTTTAAAAGTGCCAG+TGG 0.684438 4:+5737357 None:intergenic
GAAGGGTTATCGAGTAAACG+AGG 0.721548 4:+5737616 None:intergenic
GTAATGAAAGGAACTCTGTG+AGG 0.735365 4:+5737818 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTAATTACTAACATACTTTT+TGG - Chr4:5737683-5737702 MsG0480018492.01.T01:CDS 15.0%
!! GACAGATAAAAAAGTTATAA+TGG + Chr4:5737654-5737673 None:intergenic 20.0%
! AAAACAATTGATCTTGCTTT+GGG + Chr4:5737820-5737839 None:intergenic 25.0%
! AGGAAAATATCTCCAAAAAT+TGG - Chr4:5736674-5736693 MsG0480018492.01.T01:intron 25.0%
! CATATTGATGTGTTTCTTAA+TGG - Chr4:5736899-5736918 MsG0480018492.01.T01:intron 25.0%
! GGAAAATATCTCCAAAAATT+GGG - Chr4:5736675-5736694 MsG0480018492.01.T01:intron 25.0%
! GTTATTGTTTCACTTGATTT+GGG - Chr4:5737010-5737029 MsG0480018492.01.T01:CDS 25.0%
! TGTTATTGTTTCACTTGATT+TGG - Chr4:5737009-5737028 MsG0480018492.01.T01:CDS 25.0%
!! TTATTTGCAACAAAGTTTTG+AGG + Chr4:5737263-5737282 None:intergenic 25.0%
!!! AAATAATGAGTCCATTTTTC+TGG - Chr4:5737277-5737296 MsG0480018492.01.T01:CDS 25.0%
!!! TATTTGCAACAAAGTTTTGA+GGG + Chr4:5737262-5737281 None:intergenic 25.0%
!!! TTTTTGGCATTTTATTAGCT+TGG - Chr4:5737699-5737718 MsG0480018492.01.T01:CDS 25.0%
AGATGGAATTTCACGAAATT+GGG + Chr4:5736374-5736393 None:intergenic 30.0%
ATGATTATGAGTGTGATTAC+TGG - Chr4:5736627-5736646 MsG0480018492.01.T01:intron 30.0%
ATTTCACAGGAAGTAATGAA+AGG + Chr4:5736298-5736317 None:intergenic 30.0%
CAAAACAATTGATCTTGCTT+TGG + Chr4:5737821-5737840 None:intergenic 30.0%
CAAAGTCTATCATAATGCAA+AGG + Chr4:5736878-5736897 None:intergenic 30.0%
CTATCATAATGCAAAGGAAA+AGG + Chr4:5736872-5736891 None:intergenic 30.0%
CTTTGCATTATGATAGACTT+TGG - Chr4:5736876-5736895 MsG0480018492.01.T01:intron 30.0%
GATCACCTATTATAATGATC+CGG - Chr4:5736958-5736977 MsG0480018492.01.T01:intron 30.0%
GATCATTATAATAGGTGATC+GGG + Chr4:5736958-5736977 None:intergenic 30.0%
GGATCATTATAATAGGTGAT+CGG + Chr4:5736959-5736978 None:intergenic 30.0%
TAAACTGAAAACTCTCACAT+CGG + Chr4:5736807-5736826 None:intergenic 30.0%
TATAGGATATGGAATGATAC+TGG + Chr4:5736465-5736484 None:intergenic 30.0%
TCAAATGTGTAAGTAATCCT+TGG - Chr4:5736330-5736349 MsG0480018492.01.T01:CDS 30.0%
! ATGTGAGAGTTTTCAGTTTA+GGG - Chr4:5736807-5736826 MsG0480018492.01.T01:intron 30.0%
! TCATGAAAACACCCAATTTT+TGG + Chr4:5736689-5736708 None:intergenic 30.0%
! TTTTCAATCAATAGAGAGTG+AGG + Chr4:5736530-5736549 None:intergenic 30.0%
!! TGAGTGATTAGTTTGAATTG+TGG + Chr4:5736419-5736438 None:intergenic 30.0%
!! TTTTGGAGATATTTTCCTAG+TGG + Chr4:5736672-5736691 None:intergenic 30.0%
!!! GTGATTTTGATTTCTTGAGA+TGG + Chr4:5736391-5736410 None:intergenic 30.0%
AAACGAAGAAGTGATTTCAC+AGG + Chr4:5736311-5736330 None:intergenic 35.0%
AAACGAGTGCTTTCAAATTG+CGG - Chr4:5737410-5737429 MsG0480018492.01.T01:CDS 35.0%
AAAGATTGCTCTCATATAGC+TGG - Chr4:5736548-5736567 MsG0480018492.01.T01:intron 35.0%
ACGATCAAATTCCACATAGT+AGG + Chr4:5737619-5737638 None:intergenic 35.0%
AGTAAACGAGGTATAGGATA+TGG + Chr4:5736476-5736495 None:intergenic 35.0%
CAATACATATCGAGTGTGTT+TGG + Chr4:5737390-5737409 None:intergenic 35.0%
CATTTCAGATGCTTCATTCA+TGG - Chr4:5737749-5737768 MsG0480018492.01.T01:CDS 35.0%
CGATGTTGGAGATATTATAC+AGG - Chr4:5737782-5737801 MsG0480018492.01.T01:CDS 35.0%
CTAATCACTCAGTATGAGTA+TGG - Chr4:5736428-5736447 MsG0480018492.01.T01:intron 35.0%
GAATTTCACGAAATTGGGAT+CGG + Chr4:5736369-5736388 None:intergenic 35.0%
GAGAAACATTGAAAGTTTCC+CGG - Chr4:5736841-5736860 MsG0480018492.01.T01:intron 35.0%
GAGATGGAATTTCACGAAAT+TGG + Chr4:5736375-5736394 None:intergenic 35.0%
GGAGATATTATACAGGAGAA+TGG - Chr4:5737789-5737808 MsG0480018492.01.T01:CDS 35.0%
GTGGTTGCATGTATCAATAA+AGG - Chr4:5737102-5737121 MsG0480018492.01.T01:CDS 35.0%
TCAGTTTAGGGGATAATGTT+TGG - Chr4:5736819-5736838 MsG0480018492.01.T01:intron 35.0%
TGTTTCATTGACCTACTATG+TGG - Chr4:5737605-5737624 MsG0480018492.01.T01:CDS 35.0%
TTATCGAGTAAACGAGGTAT+AGG + Chr4:5736482-5736501 None:intergenic 35.0%
TTGATGTGTTTCTTAATGGC+AGG - Chr4:5736903-5736922 MsG0480018492.01.T01:intron 35.0%
TTGTCAAATAGCGTCTATAG+AGG - Chr4:5737503-5737522 MsG0480018492.01.T01:CDS 35.0%
! ACTCAGCTAATTTGTGTAAG+AGG - Chr4:5737213-5737232 MsG0480018492.01.T01:CDS 35.0%
! GATGTGAGAGTTTTCAGTTT+AGG - Chr4:5736806-5736825 MsG0480018492.01.T01:intron 35.0%
! GTAGCTCTATTGATACTGTT+GGG - Chr4:5737326-5737345 MsG0480018492.01.T01:CDS 35.0%
! TAGCTCTATTGATACTGTTG+GGG - Chr4:5737327-5737346 MsG0480018492.01.T01:CDS 35.0%
! TGTAGCTCTATTGATACTGT+TGG - Chr4:5737325-5737344 MsG0480018492.01.T01:CDS 35.0%
! TGTGAGAGTTTTCAGTTTAG+GGG - Chr4:5736808-5736827 MsG0480018492.01.T01:intron 35.0%
!! AATTAGCTTTGTGCAAAGTG+GGG - Chr4:5737155-5737174 MsG0480018492.01.T01:CDS 35.0%
!! ACAATTAGCTTTGTGCAAAG+TGG - Chr4:5737153-5737172 MsG0480018492.01.T01:CDS 35.0%
!! CAATTAGCTTTGTGCAAAGT+GGG - Chr4:5737154-5737173 MsG0480018492.01.T01:CDS 35.0%
!! CATTTTATTAGCTTGGTTGC+TGG - Chr4:5737706-5737725 MsG0480018492.01.T01:CDS 35.0%
!! TGATCAAACCGCTATTTTCT+GGG - Chr4:5737554-5737573 MsG0480018492.01.T01:CDS 35.0%
!! TTGATCAAACCGCTATTTTC+TGG - Chr4:5737553-5737572 MsG0480018492.01.T01:CDS 35.0%
AGATGCTTCATTCATGGAAG+AGG - Chr4:5737755-5737774 MsG0480018492.01.T01:CDS 40.0%
AGCTCTATTGATACTGTTGG+GGG - Chr4:5737328-5737347 MsG0480018492.01.T01:CDS 40.0%
ATGGAAGAGGAAAACGATGT+TGG - Chr4:5737768-5737787 MsG0480018492.01.T01:CDS 40.0%
CACCTATTATAATGATCCGG+CGG - Chr4:5736961-5736980 MsG0480018492.01.T01:intron 40.0%
CAGCAACAAGGGTAAAAGAA+GGG + Chr4:5736505-5736524 None:intergenic 40.0%
CTGAGACATACCATCAGTAT+CGG - Chr4:5737035-5737054 MsG0480018492.01.T01:CDS 40.0%
GCTCAACTCAACCAGAAAAA+TGG + Chr4:5737291-5737310 None:intergenic 40.0%
GGAATGAGTTGTCAAGTAAC+TGG - Chr4:5737361-5737380 MsG0480018492.01.T01:CDS 40.0%
GTAATGAAAGGAACTCTGTG+AGG + Chr4:5736286-5736305 None:intergenic 40.0%
TCAGCAACAAGGGTAAAAGA+AGG + Chr4:5736506-5736525 None:intergenic 40.0%
TCGAAGATCCCAGAAAATAG+CGG + Chr4:5737565-5737584 None:intergenic 40.0%
TGCAAAGGAAAAGGAAGAAC+CGG + Chr4:5736863-5736882 None:intergenic 40.0%
TTATGATGAGATGTCGCATG+TGG - Chr4:5737069-5737088 MsG0480018492.01.T01:CDS 40.0%
TTCTTAATGGCAGGCTTAAC+TGG - Chr4:5736912-5736931 MsG0480018492.01.T01:intron 40.0%
TTTGGCTGTGATAATTCCAC+TGG - Chr4:5736728-5736747 MsG0480018492.01.T01:intron 40.0%
! ATATAGCTGGTTCCTGTAAC+GGG - Chr4:5736561-5736580 MsG0480018492.01.T01:intron 40.0%
! ATTGGGTGTTTTCATGATCG+TGG - Chr4:5736692-5736711 MsG0480018492.01.T01:intron 40.0%
! CATATAGCTGGTTCCTGTAA+CGG - Chr4:5736560-5736579 MsG0480018492.01.T01:intron 40.0%
! CGTGGTTTCGTCTTCAATTT+TGG - Chr4:5736710-5736729 MsG0480018492.01.T01:intron 40.0%
! GAGATATTTTCCTAGTGGCT+GGG + Chr4:5736667-5736686 None:intergenic 40.0%
!! AACCACTTTAAAAGTGCCAG+TGG + Chr4:5736747-5736766 None:intergenic 40.0%
!! ATTAGCTTTGTGCAAAGTGG+GGG - Chr4:5737156-5737175 MsG0480018492.01.T01:CDS 40.0%
!! TTCCACTGGCACTTTTAAAG+TGG - Chr4:5736742-5736761 MsG0480018492.01.T01:intron 40.0%
ACAGTAATATCCTTCACCGC+CGG + Chr4:5736980-5736999 None:intergenic 45.0%
AGAGTGAGGATCAGCAACAA+GGG + Chr4:5736516-5736535 None:intergenic 45.0%
CAAACAGATCAACCCGTTAC+AGG + Chr4:5736576-5736595 None:intergenic 45.0%
CACCGCCGGATCATTATAAT+AGG + Chr4:5736966-5736985 None:intergenic 45.0%
GAAGGGTTATCGAGTAAACG+AGG + Chr4:5736488-5736507 None:intergenic 45.0%
GACATCTCATCATAACCCCT+AGG + Chr4:5737064-5737083 None:intergenic 45.0%
GATACATGCAACCACACAAC+TGG + Chr4:5737097-5737116 None:intergenic 45.0%
GCAAAGGAAAAGGAAGAACC+GGG + Chr4:5736862-5736881 None:intergenic 45.0%
TAATGGCAGGCTTAACTGGT+TGG - Chr4:5736916-5736935 MsG0480018492.01.T01:intron 45.0%
TAGTGGCTGGGTTCCATATA+CGG + Chr4:5736655-5736674 None:intergenic 45.0%
TTATAATGATCCGGCGGTGA+AGG - Chr4:5736967-5736986 MsG0480018492.01.T01:intron 45.0%
! GGAGATATTTTCCTAGTGGC+TGG + Chr4:5736668-5736687 None:intergenic 45.0%
!! AACGGGTTGATCTGTTTGAC+TGG - Chr4:5736578-5736597 MsG0480018492.01.T01:intron 45.0%
!! GTGATTACTGGCTCCGTATA+TGG - Chr4:5736639-5736658 MsG0480018492.01.T01:intron 45.0%
!! TCGGAAATGAGAGTGTTCCA+AGG + Chr4:5736350-5736369 None:intergenic 45.0%
ACTGTTGGGGGATGAAGCTT+TGG - Chr4:5737340-5737359 MsG0480018492.01.T01:CDS 50.0%
GAACTCTGTGAGGAGATCGT+CGG + Chr4:5736276-5736295 None:intergenic 50.0%
GAGAGTGAGGATCAGCAACA+AGG + Chr4:5736517-5736536 None:intergenic 50.0%
GTATATGGAACCCAGCCACT+AGG - Chr4:5736654-5736673 MsG0480018492.01.T01:intron 50.0%
!! ACCATCAGTATCGGTTGCCT+AGG - Chr4:5737044-5737063 MsG0480018492.01.T01:CDS 50.0%
!! CATCAGTATCGGTTGCCTAG+GGG - Chr4:5737046-5737065 MsG0480018492.01.T01:CDS 50.0%
!! CCATCAGTATCGGTTGCCTA+GGG - Chr4:5737045-5737064 MsG0480018492.01.T01:CDS 50.0%
CCCTAGGCAACCGATACTGA+TGG + Chr4:5737048-5737067 None:intergenic 55.0%
CGCATGTGGAGCCAGTTGTG+TGG - Chr4:5737083-5737102 MsG0480018492.01.T01:CDS 60.0%
Chromosome Type Strat End Strand Name
Chr4 gene 5736254 5737869 5736254 ID=MsG0480018492.01;Name=MsG0480018492.01
Chr4 mRNA 5736254 5737869 5736254 ID=MsG0480018492.01.T01;Parent=MsG0480018492.01;Name=MsG0480018492.01.T01;_AED=0.09;_eAED=0.09;_QI=0|0|0|0.5|1|1|2|0|340
Chr4 exon 5737000 5737869 5737000 ID=MsG0480018492.01.T01:exon:2080;Parent=MsG0480018492.01.T01
Chr4 exon 5736254 5736406 5736254 ID=MsG0480018492.01.T01:exon:2079;Parent=MsG0480018492.01.T01
Chr4 CDS 5737000 5737869 5737000 ID=MsG0480018492.01.T01:cds;Parent=MsG0480018492.01.T01
Chr4 CDS 5736254 5736406 5736254 ID=MsG0480018492.01.T01:cds;Parent=MsG0480018492.01.T01
Gene Sequence

>MsG0480018492.01.T01

ATGTCGCGGGCGTTCTTCTCCGACGATCTCCTCACAGAGTTCCTTTCATTACTTCCTGTGAAATCACTTCTTCGTTTCAAATGTGTAAGTAATCCTTGGAACACTCTCATTTCCGATCCCAATTTCGTGAAATTCCATCTCAAGAAATCAAAATCACAAAATCCACAATTCAAACTAATCACTCAGTATGAGTATGGTGATTTTGATGCCAGTATCATTCCATATCCTATACCTCGTTTACTCGATAACCCTTCTTTTACCCTTGTTGCTGATCCTCACTCTCTATTGATTGAAAAAGATTGCTCTCATATAGCTGGTTCCTGTAACGGGTTGATCTGTTTGACTGGTCATCGTTTCATTGATGCTGAATGTTATGATTATGAGTGTGATTACTGGCTCCGTATATGGAACCCAGCCACTAGGAAAATATCTCCAAAAATTGGGTGTTTTCATGATCGTGGTTTCGTCTTCAATTTTGGCTGTGATAATTCCACTGGCACTTTTAAAGTGGTTGCGTCACGTTACATTTATGATCATGATCAAGTGACAACCGATGTGAGAGTTTTCAGTTTAGGGGATAATGTTTGGAGAAACATTGAAAGTTTCCCGGTTCTTCCTTTTCCTTTGCATTATGATAGACTTTGGCATATTGATGTGTTTCTTAATGGCAGGCTTAACTGGTTGGCTATTCACAGTGACATCCCGATCACCTATTATAATGATCCGGCGGTGAAGGATATTACTGTTGATCAGATTGTTATTGTTTCACTTGATTTGGGAACTGAGACATACCATCAGTATCGGTTGCCTAGGGGTTATGATGAGATGTCGCATGTGGAGCCAGTTGTGTGGTTGCATGTATCAATAAAGCTTGGTTGCTGGTATAAGAAGTCATCAAGAAGCATTTCAGATGCTTCATTCATGGAAGAGGAAAACGATGTTGGAGATATTATACAGGAGAATGGAAAATCCCAAAGCAAGATCAATTGTTTTGTTTCTGCGTTTGATTACATGTATGCCTAA
Protein sequence

>MsG0480018492.01.T01

MSRAFFSDDLLTEFLSLLPVKSLLRFKCVSNPWNTLISDPNFVKFHLKKSKSQNPQFKLITQYEYGDFDASIIPYPIPRLLDNPSFTLVADPHSLLIEKDCSHIAGSCNGLICLTGHRFIDAECYDYECDYWLRIWNPATRKISPKIGCFHDRGFVFNFGCDNSTGTFKVVASRYIYDHDQVTTDVRVFSLGDNVWRNIESFPVLPFPLHYDRLWHIDVFLNGRLNWLAIHSDIPITYYNDPAVKDITVDQIVIVSLDLGTETYHQYRLPRGYDEMSHVEPVVWLHVSIKLGCWYKKSSRSISDASFMEEENDVGDIIQENGKSQSKINCFVSAFDYMYA*