AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0480018181.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0480018181.01.T01 MTR_4g030830 44.815 270 87 8 104 323 138 395 1.19e-58 194
MsG0480018181.01.T01 MTR_2g461450 47.034 236 84 5 104 305 129 357 2.39e-56 186
MsG0480018181.01.T01 MTR_4g031020 44.569 267 91 6 104 322 171 428 5.50e-55 185
MsG0480018181.01.T01 MTR_4g030980 43.609 266 95 6 104 322 171 428 1.15e-54 184
MsG0480018181.01.T01 MTR_4g019990 42.029 276 100 7 96 323 127 390 3.40e-53 179
MsG0480018181.01.T01 MTR_3g464500 44.130 247 84 5 121 322 166 403 1.22e-51 176
MsG0480018181.01.T01 MTR_4g030760 46.400 250 91 10 104 323 196 432 1.48e-51 176
MsG0480018181.01.T01 MTR_3g464470 43.396 265 93 7 104 322 127 380 5.32e-51 173
MsG0480018181.01.T01 MTR_4g024890 43.243 259 99 8 104 322 135 385 2.50e-50 172
MsG0480018181.01.T01 MTR_4g020000 42.213 244 81 6 108 305 98 327 4.85e-49 167
MsG0480018181.01.T01 MTR_4g030110 46.330 218 91 4 117 310 170 385 1.74e-46 161
MsG0480018181.01.T01 MTR_8g101940 42.745 255 100 7 104 323 126 369 1.39e-42 151
MsG0480018181.01.T01 MTR_1g112010 38.346 266 79 8 104 323 100 326 2.53e-40 144
MsG0480018181.01.T01 MTR_5g056020 35.357 280 117 10 104 322 145 421 9.89e-38 140
MsG0480018181.01.T01 MTR_6g016285 37.262 263 104 7 117 323 162 419 2.00e-37 139
MsG0480018181.01.T01 MTR_6g017305 35.227 264 124 7 104 322 21 282 2.39e-37 135
MsG0480018181.01.T01 MTR_4g030090 38.023 263 115 9 104 322 142 400 2.72e-36 135
MsG0480018181.01.T01 MTR_6g017280 34.091 264 121 8 104 322 133 388 1.33e-34 130
MsG0480018181.01.T01 MTR_7g066100 36.145 249 94 9 121 322 164 394 1.54e-34 130
MsG0480018181.01.T01 MTR_6g017270 36.564 227 116 7 104 322 135 341 1.92e-34 129
MsG0480018181.01.T01 MTR_7g066000 35.686 255 108 8 114 323 161 404 1.05e-33 128
MsG0480018181.01.T01 MTR_8g066440 35.918 245 95 6 122 321 174 401 1.09e-33 128
MsG0480018181.01.T01 MTR_6g055210 35.294 255 113 8 121 323 167 421 1.25e-33 129
MsG0480018181.01.T01 MTR_7g056503 32.184 261 126 6 105 322 146 398 1.74e-33 127
MsG0480018181.01.T01 MTR_7g009265 35.124 242 113 7 122 321 84 323 2.93e-33 125
MsG0480018181.01.T01 MTR_2g437110 33.865 251 121 8 104 321 154 392 3.35e-32 125
MsG0480018181.01.T01 MTR_5g058620 33.878 245 115 7 103 304 13 253 4.04e-32 121
MsG0480018181.01.T01 MTR_1g058870 33.878 245 115 7 103 304 13 253 4.04e-32 121
MsG0480018181.01.T01 MTR_7g056173 32.549 255 109 6 118 320 22 265 6.45e-32 122
MsG0480018181.01.T01 MTR_4g013185 32.171 258 113 7 121 321 173 425 2.99e-31 122
MsG0480018181.01.T01 MTR_7g055830 34.800 250 106 10 122 322 116 357 3.53e-31 120
MsG0480018181.01.T01 MTR_7g055930 35.200 250 105 10 122 322 184 425 3.69e-31 121
MsG0480018181.01.T01 MTR_2g010935 35.023 217 108 9 128 321 43 249 8.91e-31 117
MsG0480018181.01.T01 MTR_7g055870 34.800 250 106 10 122 322 184 425 1.13e-30 120
MsG0480018181.01.T01 MTR_7g057270 32.540 252 114 7 117 321 171 413 1.22e-30 120
MsG0480018181.01.T01 MTR_3g080370 35.472 265 110 7 114 322 159 418 1.34e-30 120
MsG0480018181.01.T01 MTR_7g445890 32.927 246 119 6 122 322 139 383 3.12e-30 118
MsG0480018181.01.T01 MTR_0128s0020 35.521 259 118 12 96 320 149 392 3.45e-30 118
MsG0480018181.01.T01 MTR_7g070830 33.730 252 110 10 117 321 179 420 4.54e-30 118
MsG0480018181.01.T01 MTR_7g091630 32.319 263 107 8 121 322 179 431 5.52e-30 118
MsG0480018181.01.T01 MTR_7g078040 31.418 261 118 6 119 321 175 432 1.00e-29 117
MsG0480018181.01.T01 MTR_6g088385 34.783 253 101 6 121 322 80 319 2.87e-29 114
MsG0480018181.01.T01 MTR_7g070880 33.730 252 110 9 117 321 179 420 3.75e-29 116
MsG0480018181.01.T01 MTR_2g010920 31.008 258 123 7 112 321 174 424 4.76e-29 115
MsG0480018181.01.T01 MTR_7g055953 33.750 240 107 7 121 321 88 314 7.80e-29 113
MsG0480018181.01.T01 MTR_0707s0020 33.333 252 106 5 120 322 206 444 8.19e-29 115
MsG0480018181.01.T01 MTR_7g078960 32.558 301 120 11 84 321 6 286 1.09e-28 112
MsG0480018181.01.T01 MTR_7g078840 33.103 290 114 9 104 321 150 431 1.37e-28 114
MsG0480018181.01.T01 MTR_4g013180 34.335 233 93 5 120 303 152 373 3.15e-28 114
MsG0480018181.01.T01 MTR_2g010950 30.709 254 115 7 117 321 163 404 3.19e-28 113
MsG0480018181.01.T01 MTR_2g043400 30.451 266 106 6 117 322 172 418 3.62e-28 113
MsG0480018181.01.T01 MTR_4g024910 36.574 216 77 6 104 319 108 263 5.25e-28 111
MsG0480018181.01.T01 MTR_6g086920 33.716 261 107 8 120 322 218 470 5.53e-28 113
MsG0480018181.01.T01 MTR_7g062060 33.475 236 109 6 120 321 178 399 6.75e-28 112
MsG0480018181.01.T01 MTR_7g060940 33.942 274 101 9 104 323 148 395 9.34e-28 112
MsG0480018181.01.T01 MTR_5g068040 34.568 243 106 5 121 321 149 380 1.35e-27 111
MsG0480018181.01.T01 MTR_0128s0010 29.719 249 129 6 108 322 162 398 1.57e-27 111
MsG0480018181.01.T01 MTR_1g015740 36.937 222 103 7 121 320 119 325 4.27e-27 108
MsG0480018181.01.T01 MTR_7g078900 32.567 261 103 7 121 321 175 422 4.87e-27 110
MsG0480018181.01.T01 MTR_2g043410 30.651 261 103 7 121 322 176 417 4.94e-27 110
MsG0480018181.01.T01 MTR_1g016960 37.321 209 86 8 118 321 87 255 7.98e-27 106
MsG0480018181.01.T01 MTR_6g092560 32.061 262 110 9 113 322 151 396 8.40e-27 109
MsG0480018181.01.T01 MTR_7g077070 32.534 292 107 12 104 321 154 429 2.27e-26 108
MsG0480018181.01.T01 MTR_7g066010 35.681 213 107 7 121 322 177 370 4.48e-26 107
MsG0480018181.01.T01 MTR_4g013175 33.047 233 99 7 121 304 173 397 5.00e-26 107
MsG0480018181.01.T01 MTR_7g077910 31.985 272 101 11 119 322 81 336 5.41e-26 105
MsG0480018181.01.T01 MTR_7g062100 33.197 244 106 9 120 322 170 397 5.91e-26 107
MsG0480018181.01.T01 MTR_6g081280 30.252 238 124 9 117 321 12 240 6.27e-26 103
MsG0480018181.01.T01 MTR_0128s0070 32.927 246 118 10 109 320 163 395 7.80e-26 106
MsG0480018181.01.T01 MTR_7g056793 33.180 217 114 10 112 320 37 230 1.09e-25 102
MsG0480018181.01.T01 MTR_7g056170 34.199 231 105 9 122 323 249 461 1.62e-25 106
MsG0480018181.01.T01 MTR_5g069930 32.218 239 99 8 123 319 157 374 2.51e-25 104
MsG0480018181.01.T01 MTR_7g079160 35.000 240 97 10 113 304 176 404 2.81e-25 105
MsG0480018181.01.T01 MTR_4g024870 38.249 217 85 10 104 314 170 343 2.85e-25 105
MsG0480018181.01.T01 MTR_7g034310 32.932 249 83 8 121 321 15 227 3.11e-25 101
MsG0480018181.01.T01 MTR_5g096710 30.043 233 125 4 123 322 172 399 4.45e-25 104
MsG0480018181.01.T01 MTR_6g065510 32.271 251 94 8 123 321 104 330 4.81e-25 103
MsG0480018181.01.T01 MTR_7g077970 30.116 259 118 6 121 321 168 421 5.34e-25 104
MsG0480018181.01.T01 MTR_7g056290 32.692 260 107 9 117 322 176 421 6.07e-25 104
MsG0480018181.01.T01 MTR_7g113500 32.530 249 117 8 117 321 140 381 6.27e-25 103
MsG0480018181.01.T01 MTR_5g043160 30.325 277 138 8 95 322 188 458 8.95e-25 104
MsG0480018181.01.T01 MTR_7g056390 33.205 259 105 9 117 321 172 416 9.85e-25 103
MsG0480018181.01.T01 MTR_1g029650 32.000 250 110 9 121 320 163 402 1.09e-24 103
MsG0480018181.01.T01 MTR_2g047892 30.800 250 104 7 121 322 169 397 1.17e-24 103
MsG0480018181.01.T01 MTR_7g060960 33.333 249 89 8 121 323 152 369 1.42e-24 102
MsG0480018181.01.T01 MTR_4g006350 31.020 245 113 8 123 320 638 873 2.38e-24 103
MsG0480018181.01.T01 MTR_5g069760 31.621 253 99 9 115 321 145 369 5.51e-24 100
MsG0480018181.01.T01 MTR_7g056200 34.081 223 86 9 152 322 169 382 5.73e-24 101
MsG0480018181.01.T01 MTR_7g056760 29.289 239 122 7 123 322 175 405 3.57e-23 99.4
MsG0480018181.01.T01 MTR_1g088120 31.679 262 114 11 118 321 156 410 4.86e-23 99.0
MsG0480018181.01.T01 MTR_7g078860 31.646 237 93 8 123 307 164 383 5.46e-23 98.6
MsG0480018181.01.T01 MTR_7g061050 32.922 243 98 9 123 321 162 383 9.55e-23 97.8
MsG0480018181.01.T01 MTR_4g008790 32.189 233 88 6 117 303 208 416 1.04e-22 98.6
MsG0480018181.01.T01 MTR_7g070900 39.894 188 79 10 108 276 223 395 1.04e-22 98.6
MsG0480018181.01.T01 MTR_3g437520 30.962 239 110 4 121 311 183 414 1.26e-22 98.2
MsG0480018181.01.T01 MTR_7g022600 29.084 251 125 7 121 323 178 423 1.36e-22 97.8
MsG0480018181.01.T01 MTR_7g056710 31.873 251 105 11 113 320 152 379 1.67e-22 97.1
MsG0480018181.01.T01 MTR_4g128320 31.674 221 112 7 108 304 56 261 1.89e-22 95.1
MsG0480018181.01.T01 MTR_6g017295 30.303 264 114 10 104 302 71 329 2.14e-22 97.8
MsG0480018181.01.T01 MTR_0464s0020 32.308 260 105 9 121 322 183 429 2.23e-22 97.1
MsG0480018181.01.T01 MTR_0097s0030 30.000 260 99 8 118 322 157 388 3.52e-22 96.3
MsG0480018181.01.T01 MTR_2g047240 30.000 260 99 8 118 322 157 388 3.52e-22 96.3
MsG0480018181.01.T01 MTR_3g013470 32.287 223 103 7 122 304 135 349 3.72e-22 95.9
MsG0480018181.01.T01 MTR_7g066030 32.510 243 107 7 121 322 177 403 5.84e-22 95.9
MsG0480018181.01.T01 MTR_2g006360 34.649 228 105 9 119 320 152 361 7.50e-22 95.1
MsG0480018181.01.T01 MTR_7g091610 35.912 181 69 4 185 322 71 247 7.90e-22 92.8
MsG0480018181.01.T01 MTR_0242s0060 28.462 260 120 7 119 321 167 417 8.31e-22 95.5
MsG0480018181.01.T01 MTR_0242s0040 28.462 260 120 7 119 321 167 417 8.31e-22 95.5
MsG0480018181.01.T01 MTR_0649s0020 32.558 258 96 9 120 322 154 388 1.68e-21 94.4
MsG0480018181.01.T01 MTR_7g028660 31.325 249 97 9 122 321 155 378 2.28e-21 94.0
MsG0480018181.01.T01 MTR_7g066850 31.395 258 102 10 124 323 166 406 2.41e-21 94.4
MsG0480018181.01.T01 MTR_3g072470 31.298 262 109 9 117 322 172 418 2.63e-21 94.0
MsG0480018181.01.T01 MTR_4g037465 29.389 262 125 8 106 323 150 395 2.73e-21 94.0
MsG0480018181.01.T01 MTR_7g077990 30.120 249 105 8 125 318 156 390 2.79e-21 94.0
MsG0480018181.01.T01 MTR_0267s0050 30.568 229 98 7 122 306 158 369 6.50e-21 92.8
MsG0480018181.01.T01 MTR_7g061060 30.263 228 89 7 123 303 165 369 8.32e-21 92.4
MsG0480018181.01.T01 MTR_4g129160 33.636 220 94 9 104 279 149 360 8.45e-21 92.0
MsG0480018181.01.T01 MTR_1g442850 28.992 238 109 7 124 321 158 375 1.13e-20 91.7
MsG0480018181.01.T01 MTR_4g030790 37.634 186 72 8 104 250 109 289 1.69e-20 90.9
MsG0480018181.01.T01 MTR_4g011660 29.119 261 114 5 120 322 171 418 1.74e-20 91.7
MsG0480018181.01.T01 MTR_7g056570 30.709 254 99 9 113 321 161 382 1.88e-20 91.7
MsG0480018181.01.T01 MTR_0354s0030 44.792 96 52 1 228 322 1 96 2.00e-20 84.7
MsG0480018181.01.T01 MTR_7g056003 28.866 291 124 12 97 322 136 408 3.15e-20 90.9
MsG0480018181.01.T01 MTR_7g056820 29.880 251 104 10 115 320 150 373 3.55e-20 90.5
MsG0480018181.01.T01 MTR_7g035295 32.203 236 99 10 122 322 171 380 3.92e-20 90.5
MsG0480018181.01.T01 MTR_3g013950 29.258 229 101 8 122 306 160 371 5.30e-20 90.1
MsG0480018181.01.T01 MTR_7g056717 31.429 245 106 9 117 321 163 385 7.07e-20 89.7
MsG0480018181.01.T01 MTR_4g129190 28.839 267 106 9 116 321 146 389 7.95e-20 89.7
MsG0480018181.01.T01 MTR_2g047200 30.769 260 111 10 109 322 158 394 8.86e-20 89.4
MsG0480018181.01.T01 MTR_4g030880 36.923 195 93 8 128 307 22 201 1.07e-19 89.7
MsG0480018181.01.T01 MTR_1g015730 32.932 249 104 11 121 320 159 393 2.00e-19 88.6
MsG0480018181.01.T01 MTR_7g066040 43.878 98 48 2 121 215 82 175 5.89e-19 84.7
MsG0480018181.01.T01 MTR_7g061090 31.048 248 102 9 121 321 180 405 6.18e-19 87.0
MsG0480018181.01.T01 MTR_7g056797 30.290 241 115 9 123 322 175 403 9.87e-19 86.7
MsG0480018181.01.T01 MTR_2g060555 31.481 216 94 9 123 310 87 276 1.14e-18 84.7
MsG0480018181.01.T01 MTR_7g078940 28.689 244 123 8 104 322 185 402 1.48e-18 85.9
MsG0480018181.01.T01 MTR_7g050520 31.660 259 98 11 119 323 158 391 3.69e-18 84.7
MsG0480018181.01.T01 MTR_1g071010 28.030 264 129 9 104 322 140 387 3.87e-18 84.7
MsG0480018181.01.T01 MTR_2g047878 31.696 224 110 6 120 322 163 364 4.31e-18 84.3
MsG0480018181.01.T01 MTR_7g078880 30.144 209 104 6 151 318 104 311 1.02e-17 83.6
MsG0480018181.01.T01 MTR_7g070937 44.554 101 49 4 121 218 10 106 1.39e-17 79.3
MsG0480018181.01.T01 MTR_7g050480 31.967 244 94 10 124 320 170 388 1.58e-17 82.8
MsG0480018181.01.T01 MTR_2g017720 29.317 249 103 9 117 317 73 296 2.15e-17 82.8
MsG0480018181.01.T01 MTR_7g052150 29.150 247 105 9 124 320 172 398 4.58e-17 81.6
MsG0480018181.01.T01 MTR_4g033495 27.755 245 115 8 121 323 182 406 4.72e-17 81.6
MsG0480018181.01.T01 MTR_7g021580 29.167 216 96 6 106 321 142 300 7.16e-17 80.1
MsG0480018181.01.T01 MTR_8g030630 33.714 175 89 5 145 299 273 440 7.35e-17 81.3
MsG0480018181.01.T01 MTR_8g030630 30.811 185 78 5 167 307 67 245 1.33e-15 77.4
MsG0480018181.01.T01 MTR_7g052670 39.806 103 52 1 220 322 333 425 8.50e-17 81.3
MsG0480018181.01.T01 MTR_7g066060 30.800 250 103 10 123 322 178 407 8.57e-17 81.3
MsG0480018181.01.T01 MTR_7g022670 25.664 226 125 5 136 322 130 351 1.06e-16 80.1
MsG0480018181.01.T01 MTR_7g056737 29.150 247 104 9 104 302 147 370 1.23e-16 80.5
MsG0480018181.01.T01 MTR_7g055977 41.176 102 57 2 220 321 282 380 1.70e-16 79.7
MsG0480018181.01.T01 MTR_4g053470 31.737 167 95 4 133 287 145 304 3.16e-16 78.6
MsG0480018181.01.T01 MTR_4g034860 27.027 259 110 10 101 306 168 400 3.98e-16 79.0
MsG0480018181.01.T01 MTR_7g058630 42.157 102 55 2 221 322 83 180 1.74e-15 73.9
MsG0480018181.01.T01 MTR_7g037670 28.708 209 116 8 120 321 150 332 3.28e-15 75.5
MsG0480018181.01.T01 MTR_2g021150 27.234 235 113 8 123 322 158 369 4.11e-15 75.9
MsG0480018181.01.T01 MTR_6g048150 39.796 98 48 2 226 318 14 105 5.07e-14 68.6
MsG0480018181.01.T01 MTR_2g047895 26.909 275 110 11 96 316 68 305 2.22e-13 70.5
MsG0480018181.01.T01 MTR_7g061010 40.952 105 52 2 220 323 294 389 3.29e-13 70.1
MsG0480018181.01.T01 MTR_3g055000 37.624 101 45 3 221 321 44 126 3.58e-13 65.9
MsG0480018181.01.T01 MTR_2g021190 27.004 237 120 10 119 322 157 373 1.30e-12 68.2
MsG0480018181.01.T01 MTR_7g445570 38.372 86 44 2 119 197 6 89 2.06e-12 62.8
MsG0480018181.01.T01 MTR_7g445580 38.614 101 48 2 201 301 60 146 7.01e-12 62.8
MsG0480018181.01.T01 MTR_2g027820 38.318 107 57 3 220 323 202 302 7.57e-12 65.5
MsG0480018181.01.T01 MTR_7g056260 29.515 227 102 8 67 245 101 317 9.74e-12 65.1
MsG0480018181.01.T01 MTR_2g078870 25.108 231 120 9 123 322 100 308 1.31e-11 64.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score

Find 84 sgRNAs with CRISPR-Local

Find 178 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTCCCATCAAACTTATAAAT+TGG 0.193182 4:-1262648 None:intergenic
AAATGGCAGATGAAGGATTT+TGG 0.223624 4:+1262933 MsG0480018181.01.T01:CDS
CTAGACGATTTGACAATATT+AGG 0.231482 4:-1263091 None:intergenic
CATCTGCCATTTAACTAAAT+AGG 0.239720 4:-1262922 None:intergenic
AGGAAACCTATTTAGTTAAA+TGG 0.256280 4:+1262916 MsG0480018181.01.T01:intron
ATTTAAATGATCATTCATAT+TGG 0.265341 4:+1262733 MsG0480018181.01.T01:CDS
TTTAAATGATCATTCATATT+GGG 0.266288 4:+1262734 MsG0480018181.01.T01:CDS
TATCTTTCGATGGTTGAAAT+TGG 0.304233 4:+1263037 MsG0480018181.01.T01:CDS
ATTTGAATGGTACTATTAAC+TGG 0.318599 4:+1262688 MsG0480018181.01.T01:CDS
TAGACGATTTGACAATATTA+GGG 0.361144 4:-1263090 None:intergenic
CTTCCAATTTATAAGTTTGA+TGG 0.368644 4:+1262645 MsG0480018181.01.T01:CDS
AACGAAAATAACCATTCAAA+TGG 0.381893 4:-1262473 None:intergenic
CATGTATTACGTGGAAAGTA+TGG 0.386648 4:+1263196 MsG0480018181.01.T01:CDS
CCATTGTGTCTTTCTAAGAA+TGG 0.405889 4:+1263062 MsG0480018181.01.T01:CDS
ACGAAAATAACCATTCAAAT+GGG 0.410797 4:-1262472 None:intergenic
TTACGTGGAAAGTATGGTTT+CGG 0.432010 4:+1263202 MsG0480018181.01.T01:CDS
ATTAACTGGTTGGCCCTTTG+CGG 0.433642 4:+1262702 MsG0480018181.01.T01:CDS
TAAATATTTGTATCCGCAAA+GGG 0.455121 4:-1262715 None:intergenic
TTTAGTTAAATGGCAGATGA+AGG 0.457570 4:+1262926 MsG0480018181.01.T01:CDS
TTCCAATTTATAAGTTTGAT+GGG 0.477964 4:+1262646 MsG0480018181.01.T01:CDS
CGGCGGAGGATGGGATTGTT+CGG 0.481176 4:+1260837 MsG0480018181.01.T01:CDS
AATCTGCACCTGTGGATCTC+CGG 0.484150 4:-1260897 None:intergenic
TCCTCCTCTGTCTCTAGCTC+CGG 0.487582 4:-1261074 None:intergenic
CAGAGGATGATGCGTTCAAT+CGG 0.488458 4:+1261029 MsG0480018181.01.T01:CDS
CGATCGAAGACGGCGGAGGA+TGG 0.493352 4:+1260827 MsG0480018181.01.T01:CDS
CGGAAGAGGATGCGATCGAC+CGG 0.501705 4:+1260878 MsG0480018181.01.T01:CDS
GAATGGTACTATTAACTGGT+TGG 0.506614 4:+1262692 MsG0480018181.01.T01:CDS
AAGAGAGGTGTCTATTTGAA+TGG 0.507247 4:+1262675 MsG0480018181.01.T01:CDS
TAATTCCACGGGAACTTATG+AGG 0.507903 4:+1262512 MsG0480018181.01.T01:CDS
TTAAATATTTGTATCCGCAA+AGG 0.509508 4:-1262716 None:intergenic
TGAATTGCGATCGGAGACTC+AGG 0.511952 4:+1260798 MsG0480018181.01.T01:CDS
GATCAGAGATCCGCCGGAGA+AGG 0.516945 4:+1260982 MsG0480018181.01.T01:intron
GGATTGACGGTGGGAATGAT+CGG 0.518420 4:+1261003 MsG0480018181.01.T01:CDS
CATACTTTCCACGTAATACA+TGG 0.519191 4:-1263195 None:intergenic
GATCGAAGACGGCGGAGGAT+GGG 0.522091 4:+1260828 MsG0480018181.01.T01:CDS
GCTCCTTATCATGCTCAATA+CGG 0.523538 4:-1262545 None:intergenic
TCCCACCGTCAATCCTTCTC+CGG 0.525857 4:-1260995 None:intergenic
TTAAATGATCATTCATATTG+GGG 0.526298 4:+1262735 MsG0480018181.01.T01:CDS
GAGGATACGTCGATCGGAGA+TGG 0.528014 4:+1261092 MsG0480018181.01.T01:CDS
TGAGAAGTTTCGATCGGAAG+AGG 0.531346 4:+1260864 MsG0480018181.01.T01:CDS
GCGATCGACCGGAGATCCAC+AGG 0.531927 4:+1260889 MsG0480018181.01.T01:CDS
ATCCGCCGGAGAAGGATTGA+CGG 0.539040 4:+1260990 MsG0480018181.01.T01:CDS
GATACGTCGATCGGAGATGG+TGG 0.543439 4:+1261095 MsG0480018181.01.T01:CDS
CAGGAGGATGCGATCGAAGA+CGG 0.543505 4:+1260817 MsG0480018181.01.T01:CDS
TCCTCTGTCTCTAGCTCCGG+TGG 0.547712 4:-1261071 None:intergenic
GTTCCGTATTGAGCATGATA+AGG 0.549420 4:+1262542 MsG0480018181.01.T01:CDS
CGGAGGAGATAGAGATCCAC+CGG 0.554678 4:+1261055 MsG0480018181.01.T01:CDS
TTTGGTTATGATAATTCCAC+GGG 0.561775 4:+1262501 MsG0480018181.01.T01:CDS
ATCGGAGATGGTGGAAGAAG+AGG 0.564298 4:+1261104 MsG0480018181.01.T01:CDS
AGGTCGCACGGAGGAAGTGA+TGG 0.566882 4:+1261124 MsG0480018181.01.T01:CDS
GATGCGATCGAAGACGGCGG+AGG 0.580572 4:+1260823 MsG0480018181.01.T01:CDS
GTGATCGATCAGAGATCCGC+CGG 0.584722 4:+1260976 MsG0480018181.01.T01:intron
GAACAAGGTGTATCTTTCGA+TGG 0.585530 4:+1263027 MsG0480018181.01.T01:CDS
TTCTCTGGAACCCAGCCACT+AGG 0.589206 4:+1262424 MsG0480018181.01.T01:intron
TATTCATACTACAAATATCG+TGG 0.595238 4:+1263005 MsG0480018181.01.T01:CDS
ACAGAGGAGGATACGTCGAT+CGG 0.603335 4:+1261086 MsG0480018181.01.T01:CDS
GTCGCTGATTGAATTGCGAT+CGG 0.603771 4:+1260789 MsG0480018181.01.T01:CDS
GAGGTGAAAGTTCTCAGCGT+GGG 0.613885 4:+1262585 MsG0480018181.01.T01:CDS
TGGTGGAAGAAGAGGTCGCA+CGG 0.614853 4:+1261112 MsG0480018181.01.T01:CDS
CACCGTCAATCCTTCTCCGG+CGG 0.616306 4:-1260992 None:intergenic
AGGTGAAAGTTCTCAGCGTG+GGG 0.616971 4:+1262586 MsG0480018181.01.T01:CDS
GGAGACTGAGAAGTTTCGAT+CGG 0.619418 4:+1260858 MsG0480018181.01.T01:CDS
AAATTACGAATGACATATCG+TGG 0.621490 4:+1263165 MsG0480018181.01.T01:CDS
ACTACAAATATCGTGGAACA+AGG 0.623167 4:+1263012 MsG0480018181.01.T01:CDS
TTTGATGGGAGTCAAAAGAG+AGG 0.625315 4:+1262660 MsG0480018181.01.T01:CDS
GCCGGAGAAGGATTGACGGT+GGG 0.628199 4:+1260994 MsG0480018181.01.T01:CDS
CGAAAATAACCATTCAAATG+GGG 0.629835 4:-1262471 None:intergenic
TCGCACGGAGGAAGTGATGG+TGG 0.631136 4:+1261127 MsG0480018181.01.T01:CDS
CGCCGGAGAAGGATTGACGG+TGG 0.633631 4:+1260993 MsG0480018181.01.T01:CDS
ATGATGCGTTCAATCGGAGA+CGG 0.638702 4:+1261035 MsG0480018181.01.T01:CDS
TCCACCGGAGCTAGAGACAG+AGG 0.651482 4:+1261070 MsG0480018181.01.T01:CDS
ATGCGTTCAATCGGAGACGG+AGG 0.652092 4:+1261038 MsG0480018181.01.T01:CDS
GTGGGAATGATCGGAGACAG+AGG 0.653542 4:+1261012 MsG0480018181.01.T01:CDS
ACCGGAGCTAGAGACAGAGG+AGG 0.671704 4:+1261073 MsG0480018181.01.T01:CDS
TACCACCTCATAAGTTCCCG+TGG 0.674913 4:-1262517 None:intergenic
GCTAGATGCCATGTATTACG+TGG 0.674997 4:+1263187 MsG0480018181.01.T01:CDS
ATTGCGATCGGAGACTCAGG+AGG 0.681339 4:+1260801 MsG0480018181.01.T01:CDS
TTCCACGGGAACTTATGAGG+TGG 0.684464 4:+1262515 MsG0480018181.01.T01:CDS
GCATGATATTGCAAGAAGCG+AGG 0.685659 4:+1262566 MsG0480018181.01.T01:CDS
CGAGGTGAAAGTTCTCAGCG+TGG 0.691221 4:+1262584 MsG0480018181.01.T01:CDS
GGTGAAAGTTCTCAGCGTGG+GGG 0.699914 4:+1262587 MsG0480018181.01.T01:CDS
GAGGATGCGATCGAAGACGG+CGG 0.712158 4:+1260820 MsG0480018181.01.T01:CDS
CCATTCTTAGAAAGACACAA+TGG 0.722619 4:-1263062 None:intergenic
TGGAAGAAGAGGTCGCACGG+AGG 0.797353 4:+1261115 MsG0480018181.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATAACAAATATTTTTTTTGA+AGG - Chr4:1261233-1261252 None:intergenic 10.0%
!! ATTTAAATGATCATTCATAT+TGG + Chr4:1262733-1262752 MsG0480018181.01.T01:CDS 15.0%
!! TTTAAATGATCATTCATATT+GGG + Chr4:1262734-1262753 MsG0480018181.01.T01:CDS 15.0%
!! TTAAATGATCATTCATATTG+GGG + Chr4:1262735-1262754 MsG0480018181.01.T01:CDS 20.0%
!! TTATGTTGTTGAAATTGTTA+AGG + Chr4:1261557-1261576 MsG0480018181.01.T01:intron 20.0%
!! TTCCAATTTATAAGTTTGAT+GGG + Chr4:1262646-1262665 MsG0480018181.01.T01:CDS 20.0%
!!! AGATTGTTCAGAATTTTTTT+TGG - Chr4:1261788-1261807 None:intergenic 20.0%
!!! TTTCTGTTTGTTTTTTTATG+AGG - Chr4:1262006-1262025 None:intergenic 20.0%
! AACGAAAATAACCATTCAAA+TGG - Chr4:1262476-1262495 None:intergenic 25.0%
! ACGAAAATAACCATTCAAAT+GGG - Chr4:1262475-1262494 None:intergenic 25.0%
! AGGAAACCTATTTAGTTAAA+TGG + Chr4:1262916-1262935 MsG0480018181.01.T01:intron 25.0%
! ATAGTAAGGATCATATTGAA+TGG - Chr4:1262311-1262330 None:intergenic 25.0%
! ATTTGAATGGTACTATTAAC+TGG + Chr4:1262688-1262707 MsG0480018181.01.T01:CDS 25.0%
! CTCGATTATGTAATCTAAAA+AGG - Chr4:1261829-1261848 None:intergenic 25.0%
! CTTCCAATTTATAAGTTTGA+TGG + Chr4:1262645-1262664 MsG0480018181.01.T01:CDS 25.0%
! TAAATATTTGTATCCGCAAA+GGG - Chr4:1262718-1262737 None:intergenic 25.0%
! TAGACGATTTGACAATATTA+GGG - Chr4:1263093-1263112 None:intergenic 25.0%
! TATTCATACTACAAATATCG+TGG + Chr4:1263005-1263024 MsG0480018181.01.T01:CDS 25.0%
! TCTCAAATAAACGAGAAATT+GGG - Chr4:1262276-1262295 None:intergenic 25.0%
! TCTCATAGTCTATTCTTATT+GGG - Chr4:1261931-1261950 None:intergenic 25.0%
! TTAAATATTTGTATCCGCAA+AGG - Chr4:1262719-1262738 None:intergenic 25.0%
! TTCTCAAATAAACGAGAAAT+TGG - Chr4:1262277-1262296 None:intergenic 25.0%
! TTCTCATAGTCTATTCTTAT+TGG - Chr4:1261932-1261951 None:intergenic 25.0%
!! ATGCTACCAAATTTTTGATA+CGG - Chr4:1261335-1261354 None:intergenic 25.0%
!!! ATAGTATCAACCGTATTTTT+TGG + Chr4:1262025-1262044 MsG0480018181.01.T01:intron 25.0%
!!! TCGATTTGTTGAAATTGTTA+AGG + Chr4:1261608-1261627 MsG0480018181.01.T01:intron 25.0%
!!! TCTTTGTTTTTGTCATGATT+TGG + Chr4:1262893-1262912 MsG0480018181.01.T01:intron 25.0%
!!! TTGTTCAGAATTTTTTTTGG+TGG - Chr4:1261785-1261804 None:intergenic 25.0%
!!! TTTTGGTTATGATAATTCCA+CGG + Chr4:1262500-1262519 MsG0480018181.01.T01:CDS 25.0%
AAATTACGAATGACATATCG+TGG + Chr4:1263165-1263184 MsG0480018181.01.T01:CDS 30.0%
AGAAGAAAATAATGTGTGCA+AGG + Chr4:1261422-1261441 MsG0480018181.01.T01:intron 30.0%
ATGATCCTTACTATGATTTG+AGG + Chr4:1262317-1262336 MsG0480018181.01.T01:intron 30.0%
CAAATGGGGTGAAAAAAATA+CGG - Chr4:1262460-1262479 None:intergenic 30.0%
CAAGATTGTTCAGAATACAA+AGG - Chr4:1261687-1261706 None:intergenic 30.0%
CGAAAATAACCATTCAAATG+GGG - Chr4:1262474-1262493 None:intergenic 30.0%
CTAGACGATTTGACAATATT+AGG - Chr4:1263094-1263113 None:intergenic 30.0%
CTCCCATCAAACTTATAAAT+TGG - Chr4:1262651-1262670 None:intergenic 30.0%
TACATAATCGAGACAAAATG+AGG + Chr4:1261837-1261856 MsG0480018181.01.T01:intron 30.0%
TACGATCCGTATCAAAAATT+TGG + Chr4:1261326-1261345 MsG0480018181.01.T01:intron 30.0%
TATAGTACGAACTTTGTTAG+AGG - Chr4:1261972-1261991 None:intergenic 30.0%
TATCTTTCGATGGTTGAAAT+TGG + Chr4:1263037-1263056 MsG0480018181.01.T01:CDS 30.0%
TGAACCCTAACCAAAAAATA+CGG - Chr4:1262038-1262057 None:intergenic 30.0%
TTCTTCCTCAAATCATAGTA+AGG - Chr4:1262325-1262344 None:intergenic 30.0%
TTTAGTTAAATGGCAGATGA+AGG + Chr4:1262926-1262945 MsG0480018181.01.T01:CDS 30.0%
TTTGGTTATGATAATTCCAC+GGG + Chr4:1262501-1262520 MsG0480018181.01.T01:CDS 30.0%
! CATCTGCCATTTAACTAAAT+AGG - Chr4:1262925-1262944 None:intergenic 30.0%
! CTACTGGGATGAATTTTTAT+CGG + Chr4:1262239-1262258 MsG0480018181.01.T01:intron 30.0%
!! ACAAGTATTGGGAATACATA+GGG - Chr4:1262858-1262877 None:intergenic 30.0%
!! GGTTATTTTCGTTACTCTTT+TGG + Chr4:1262483-1262502 MsG0480018181.01.T01:CDS 30.0%
!!! ATCAACCGTATTTTTTGGTT+AGG + Chr4:1262030-1262049 MsG0480018181.01.T01:intron 30.0%
!!! ATTTTGGAGTTCAAGAATCA+TGG + Chr4:1262949-1262968 MsG0480018181.01.T01:CDS 30.0%
!!! GTAGCAAACTACTAGTTTTT+TGG - Chr4:1261303-1261322 None:intergenic 30.0%
!!! TCAACCGTATTTTTTGGTTA+GGG + Chr4:1262031-1262050 MsG0480018181.01.T01:intron 30.0%
!!! TTCAGAATTTTTTTTGGTGG+TGG - Chr4:1261782-1261801 None:intergenic 30.0%
!!! TTGTTTTTGTCATGATTTGG+AGG + Chr4:1262896-1262915 MsG0480018181.01.T01:intron 30.0%
!!! TTTTTTTCACCCCATTTGAA+TGG + Chr4:1262462-1262481 MsG0480018181.01.T01:CDS 30.0%
ACTACAAATATCGTGGAACA+AGG + Chr4:1263012-1263031 MsG0480018181.01.T01:CDS 35.0%
AGATGCATTTGAACGAAGTA+AGG - Chr4:1262175-1262194 None:intergenic 35.0%
ATGAAACTTTCCTGAATGTC+AGG - Chr4:1261387-1261406 None:intergenic 35.0%
CATACTTTCCACGTAATACA+TGG - Chr4:1263198-1263217 None:intergenic 35.0%
CATGTATTACGTGGAAAGTA+TGG + Chr4:1263196-1263215 MsG0480018181.01.T01:CDS 35.0%
CATTTGAACGAAGTAAGGAT+CGG - Chr4:1262170-1262189 None:intergenic 35.0%
CCATTCTTAGAAAGACACAA+TGG - Chr4:1263065-1263084 None:intergenic 35.0%
CGATAAAAATTCATCCCAGT+AGG - Chr4:1262241-1262260 None:intergenic 35.0%
CTATGTATTCCCAATACTTG+TGG + Chr4:1262857-1262876 MsG0480018181.01.T01:intron 35.0%
GAATGGTACTATTAACTGGT+TGG + Chr4:1262692-1262711 MsG0480018181.01.T01:CDS 35.0%
GGAAGAATTATGACTCTACA+TGG + Chr4:1262338-1262357 MsG0480018181.01.T01:intron 35.0%
GTAAGGATCATATTGAATGG+TGG - Chr4:1262308-1262327 None:intergenic 35.0%
! AAATGGCAGATGAAGGATTT+TGG + Chr4:1262933-1262952 MsG0480018181.01.T01:CDS 35.0%
! AGACAAAATGAGGATTTTGG+AGG + Chr4:1261847-1261866 MsG0480018181.01.T01:intron 35.0%
! CCATTGTGTCTTTCTAAGAA+TGG + Chr4:1263062-1263081 MsG0480018181.01.T01:CDS 35.0%
! TCGAGACAAAATGAGGATTT+TGG + Chr4:1261844-1261863 MsG0480018181.01.T01:intron 35.0%
! TCTAGCGTATTTTCTTGTAG+TGG + Chr4:1261354-1261373 MsG0480018181.01.T01:intron 35.0%
! TTACGTGGAAAGTATGGTTT+CGG + Chr4:1263202-1263221 MsG0480018181.01.T01:CDS 35.0%
!! AAGAGAGGTGTCTATTTGAA+TGG + Chr4:1262675-1262694 MsG0480018181.01.T01:CDS 35.0%
!! CACAAGTATTGGGAATACAT+AGG - Chr4:1262859-1262878 None:intergenic 35.0%
!! TGGTTATTTTCCTGACATTC+AGG + Chr4:1261374-1261393 MsG0480018181.01.T01:intron 35.0%
AAGCTTAGAAACCTCCACTA+TGG + Chr4:1262057-1262076 MsG0480018181.01.T01:intron 40.0%
AATCGCATCAGAGATTTGAC+TGG - Chr4:1262112-1262131 None:intergenic 40.0%
ACAACGCATGGTAATATGCA+AGG + Chr4:1261738-1261757 MsG0480018181.01.T01:intron 40.0%
ATCGCATCAGAGATTTGACT+GGG - Chr4:1262111-1262130 None:intergenic 40.0%
ATCTTCAGCACTTTGTTCTC+TGG + Chr4:1262409-1262428 MsG0480018181.01.T01:intron 40.0%
CAATCAATTGCATCCTTCTG+TGG - Chr4:1260936-1260955 None:intergenic 40.0%
CACAGAAGGATGCAATTGAT+TGG + Chr4:1260934-1260953 MsG0480018181.01.T01:intron 40.0%
CATGGTAATATGCAAGGTAG+GGG + Chr4:1261744-1261763 MsG0480018181.01.T01:intron 40.0%
CCATCAGAACCACAAGTATT+GGG - Chr4:1262869-1262888 None:intergenic 40.0%
GAACAAGGTGTATCTTTCGA+TGG + Chr4:1263027-1263046 MsG0480018181.01.T01:CDS 40.0%
GCATGGTAATATGCAAGGTA+GGG + Chr4:1261743-1261762 MsG0480018181.01.T01:intron 40.0%
GCTCCTTATCATGCTCAATA+CGG - Chr4:1262548-1262567 None:intergenic 40.0%
GTTCCGTATTGAGCATGATA+AGG + Chr4:1262542-1262561 MsG0480018181.01.T01:CDS 40.0%
TAATTCCACGGGAACTTATG+AGG + Chr4:1262512-1262531 MsG0480018181.01.T01:CDS 40.0%
TCCATCAGAACCACAAGTAT+TGG - Chr4:1262870-1262889 None:intergenic 40.0%
TGACTCTACATGGTGTGTAT+TGG + Chr4:1262348-1262367 MsG0480018181.01.T01:intron 40.0%
TGCCAATACACTACTCTATG+CGG - Chr4:1261279-1261298 None:intergenic 40.0%
TTCAGCGATAACATCCATAG+TGG - Chr4:1262074-1262093 None:intergenic 40.0%
TTTGATGGGAGTCAAAAGAG+AGG + Chr4:1262660-1262679 MsG0480018181.01.T01:CDS 40.0%
! ATGATTTTGTCCTAGTGGCT+GGG - Chr4:1262437-1262456 None:intergenic 40.0%
! TACGGATGATTTTGTCCTAG+TGG - Chr4:1262442-1262461 None:intergenic 40.0%
!! CTACTCAACTGTTTCTACCT+CGG + Chr4:1262817-1262836 MsG0480018181.01.T01:intron 40.0%
!! GTGTGTATTGGTTCATGCAA+TGG + Chr4:1262360-1262379 MsG0480018181.01.T01:intron 40.0%
!! TACTCAACTGTTTCTACCTC+GGG + Chr4:1262818-1262837 MsG0480018181.01.T01:intron 40.0%
!! TCTACCTCGGGGTTTTAATA+AGG + Chr4:1262830-1262849 MsG0480018181.01.T01:intron 40.0%
!!! AATTTTTTTTGGTGGTGGCC+AGG - Chr4:1261777-1261796 None:intergenic 40.0%
!!! ATTTTTTTTGGTGGTGGCCA+GGG - Chr4:1261776-1261795 None:intergenic 40.0%
AGCGATAACATCCATAGTGG+AGG - Chr4:1262071-1262090 None:intergenic 45.0%
ATCCACAGGTGCAGATTGAT+CGG + Chr4:1260903-1260922 MsG0480018181.01.T01:intron 45.0%
ATGATGCGTTCAATCGGAGA+CGG + Chr4:1261035-1261054 MsG0480018181.01.T01:CDS 45.0%
CAGAGGATGATGCGTTCAAT+CGG + Chr4:1261029-1261048 MsG0480018181.01.T01:CDS 45.0%
CGCATGGTAATATGCAAGGT+AGG + Chr4:1261742-1261761 MsG0480018181.01.T01:intron 45.0%
CTTCGTGAGCTTAACTCAGT+TGG + Chr4:1261710-1261729 MsG0480018181.01.T01:intron 45.0%
GCATGATATTGCAAGAAGCG+AGG + Chr4:1262566-1262585 MsG0480018181.01.T01:CDS 45.0%
GCCAATACACTACTCTATGC+GGG - Chr4:1261278-1261297 None:intergenic 45.0%
GCTAGATGCCATGTATTACG+TGG + Chr4:1263187-1263206 MsG0480018181.01.T01:CDS 45.0%
GGAGACTGAGAAGTTTCGAT+CGG + Chr4:1260858-1260877 MsG0480018181.01.T01:CDS 45.0%
TCAATTGCATCCTTCTGTGG+TGG - Chr4:1260933-1260952 None:intergenic 45.0%
TCCCGCATAGAGTAGTGTAT+TGG + Chr4:1261274-1261293 MsG0480018181.01.T01:intron 45.0%
TGAGAAGTTTCGATCGGAAG+AGG + Chr4:1260864-1260883 MsG0480018181.01.T01:CDS 45.0%
TGATCGATCACATCCTTCTC+TGG - Chr4:1260967-1260986 None:intergenic 45.0%
TTCATCCCAGTAGGTTTCAG+CGG - Chr4:1262232-1262251 None:intergenic 45.0%
! ATTAACTGGTTGGCCCTTTG+CGG + Chr4:1262702-1262721 MsG0480018181.01.T01:CDS 45.0%
! GATGATTTTGTCCTAGTGGC+TGG - Chr4:1262438-1262457 None:intergenic 45.0%
! GTCGCTGATTGAATTGCGAT+CGG + Chr4:1260789-1260808 MsG0480018181.01.T01:CDS 45.0%
!! ACTCAACTGTTTCTACCTCG+GGG + Chr4:1262819-1262838 MsG0480018181.01.T01:intron 45.0%
!! CCCAATACTTGTGGTTCTGA+TGG + Chr4:1262866-1262885 MsG0480018181.01.T01:intron 45.0%
AATCTGCACCTGTGGATCTC+CGG - Chr4:1260900-1260919 None:intergenic 50.0%
ACACTACCGCTGAAACCTAC+TGG + Chr4:1262223-1262242 MsG0480018181.01.T01:intron 50.0%
ACAGAGGAGGATACGTCGAT+CGG + Chr4:1261086-1261105 MsG0480018181.01.T01:CDS 50.0%
AGGTGAAAGTTCTCAGCGTG+GGG + Chr4:1262586-1262605 MsG0480018181.01.T01:CDS 50.0%
CACTACCGCTGAAACCTACT+GGG + Chr4:1262224-1262243 MsG0480018181.01.T01:intron 50.0%
GACTCGTACGAAGTGTAGAG+TGG + Chr4:1261869-1261888 MsG0480018181.01.T01:intron 50.0%
GAGGTGAAAGTTCTCAGCGT+GGG + Chr4:1262585-1262604 MsG0480018181.01.T01:CDS 50.0%
GATTGGAGATCCACCAGAGA+AGG + Chr4:1260951-1260970 MsG0480018181.01.T01:intron 50.0%
GGATTGACGGTGGGAATGAT+CGG + Chr4:1261003-1261022 MsG0480018181.01.T01:CDS 50.0%
GGCACCTTATTAAAACCCCG+AGG - Chr4:1262837-1262856 None:intergenic 50.0%
TACCACCTCATAAGTTCCCG+TGG - Chr4:1262520-1262539 None:intergenic 50.0%
TCGATCACATCCTTCTCTGG+TGG - Chr4:1260964-1260983 None:intergenic 50.0%
TGAATTGCGATCGGAGACTC+AGG + Chr4:1260798-1260817 MsG0480018181.01.T01:CDS 50.0%
TTCCACGGGAACTTATGAGG+TGG + Chr4:1262515-1262534 MsG0480018181.01.T01:CDS 50.0%
!! ATCGGAGATGGTGGAAGAAG+AGG + Chr4:1261104-1261123 MsG0480018181.01.T01:CDS 50.0%
!! CAGTTGGTAGAGACAACGCA+TGG + Chr4:1261726-1261745 MsG0480018181.01.T01:intron 50.0%
ATCCGCCGGAGAAGGATTGA+CGG + Chr4:1260990-1261009 MsG0480018181.01.T01:CDS 55.0%
ATGCGTTCAATCGGAGACGG+AGG + Chr4:1261038-1261057 MsG0480018181.01.T01:CDS 55.0%
ATTGCGATCGGAGACTCAGG+AGG + Chr4:1260801-1260820 MsG0480018181.01.T01:CDS 55.0%
CAAGGTAGGGGTTCAAACCC+TGG + Chr4:1261756-1261775 MsG0480018181.01.T01:intron 55.0%
CAGGAGGATGCGATCGAAGA+CGG + Chr4:1260817-1260836 MsG0480018181.01.T01:CDS 55.0%
CGAGGTGAAAGTTCTCAGCG+TGG + Chr4:1262584-1262603 MsG0480018181.01.T01:CDS 55.0%
CGGAGGAGATAGAGATCCAC+CGG + Chr4:1261055-1261074 MsG0480018181.01.T01:CDS 55.0%
CTCCGATCAATCTGCACCTG+TGG - Chr4:1260908-1260927 None:intergenic 55.0%
GAGGATACGTCGATCGGAGA+TGG + Chr4:1261092-1261111 MsG0480018181.01.T01:CDS 55.0%
GATACGTCGATCGGAGATGG+TGG + Chr4:1261095-1261114 MsG0480018181.01.T01:CDS 55.0%
GATCGGAGATCCACCACAGA+AGG + Chr4:1260920-1260939 MsG0480018181.01.T01:intron 55.0%
GGTGAAAGTTCTCAGCGTGG+GGG + Chr4:1262587-1262606 MsG0480018181.01.T01:CDS 55.0%
GTGATCGATCAGAGATCCGC+CGG + Chr4:1260976-1260995 MsG0480018181.01.T01:intron 55.0%
GTGGGAATGATCGGAGACAG+AGG + Chr4:1261012-1261031 MsG0480018181.01.T01:CDS 55.0%
TCAGCGGTAGTGTCAGCTGT+GGG - Chr4:1262216-1262235 None:intergenic 55.0%
TCAGCGTGGGGGATAGTTCT+TGG + Chr4:1262598-1262617 MsG0480018181.01.T01:CDS 55.0%
TCCCACCGTCAATCCTTCTC+CGG - Chr4:1260998-1261017 None:intergenic 55.0%
TGGTGGAAGAAGAGGTCGCA+CGG + Chr4:1261112-1261131 MsG0480018181.01.T01:CDS 55.0%
TTCAGCGGTAGTGTCAGCTG+TGG - Chr4:1262217-1262236 None:intergenic 55.0%
! TCCTCCTCTGTCTCTAGCTC+CGG - Chr4:1261077-1261096 None:intergenic 55.0%
!! TTCTCTGGAACCCAGCCACT+AGG + Chr4:1262424-1262443 MsG0480018181.01.T01:intron 55.0%
ACCGGAGCTAGAGACAGAGG+AGG + Chr4:1261073-1261092 MsG0480018181.01.T01:CDS 60.0%
AGGTCGCACGGAGGAAGTGA+TGG + Chr4:1261124-1261143 MsG0480018181.01.T01:CDS 60.0%
CACCGTCAATCCTTCTCCGG+CGG - Chr4:1260995-1261014 None:intergenic 60.0%
CGGAAGAGGATGCGATCGAC+CGG + Chr4:1260878-1260897 MsG0480018181.01.T01:CDS 60.0%
CGGCGGAGGATGGGATTGTT+CGG + Chr4:1260837-1260856 MsG0480018181.01.T01:CDS 60.0%
GAGGATGCGATCGAAGACGG+CGG + Chr4:1260820-1260839 MsG0480018181.01.T01:CDS 60.0%
GATCAGAGATCCGCCGGAGA+AGG + Chr4:1260982-1261001 MsG0480018181.01.T01:intron 60.0%
GATCGAAGACGGCGGAGGAT+GGG + Chr4:1260828-1260847 MsG0480018181.01.T01:CDS 60.0%
GCCGGAGAAGGATTGACGGT+GGG + Chr4:1260994-1261013 MsG0480018181.01.T01:CDS 60.0%
TCCACCGGAGCTAGAGACAG+AGG + Chr4:1261070-1261089 MsG0480018181.01.T01:CDS 60.0%
TCGCACGGAGGAAGTGATGG+TGG + Chr4:1261127-1261146 MsG0480018181.01.T01:CDS 60.0%
TGGAAGAAGAGGTCGCACGG+AGG + Chr4:1261115-1261134 MsG0480018181.01.T01:CDS 60.0%
! TCCTCTGTCTCTAGCTCCGG+TGG - Chr4:1261074-1261093 None:intergenic 60.0%
CGATCGAAGACGGCGGAGGA+TGG + Chr4:1260827-1260846 MsG0480018181.01.T01:CDS 65.0%
CGCCGGAGAAGGATTGACGG+TGG + Chr4:1260993-1261012 MsG0480018181.01.T01:CDS 65.0%
GATGCGATCGAAGACGGCGG+AGG + Chr4:1260823-1260842 MsG0480018181.01.T01:CDS 65.0%
GCGATCGACCGGAGATCCAC+AGG + Chr4:1260889-1260908 MsG0480018181.01.T01:CDS 65.0%
Chromosome Type Strat End Strand Name
Chr4 gene 1260787 1263232 1260787 ID=MsG0480018181.01;Name=MsG0480018181.01
Chr4 mRNA 1260787 1263232 1260787 ID=MsG0480018181.01.T01;Parent=MsG0480018181.01;Name=MsG0480018181.01.T01;_AED=0.65;_eAED=0.65;_QI=0|0|0|0.5|1|1|4|0|323
Chr4 exon 1260787 1260910 1260787 ID=MsG0480018181.01.T01:exon:865;Parent=MsG0480018181.01.T01
Chr4 exon 1260988 1261173 1260988 ID=MsG0480018181.01.T01:exon:866;Parent=MsG0480018181.01.T01
Chr4 exon 1262439 1262785 1262439 ID=MsG0480018181.01.T01:exon:867;Parent=MsG0480018181.01.T01
Chr4 exon 1262918 1263232 1262918 ID=MsG0480018181.01.T01:exon:868;Parent=MsG0480018181.01.T01
Chr4 CDS 1260787 1260910 1260787 ID=MsG0480018181.01.T01:cds;Parent=MsG0480018181.01.T01
Chr4 CDS 1260988 1261173 1260988 ID=MsG0480018181.01.T01:cds;Parent=MsG0480018181.01.T01
Chr4 CDS 1262439 1262785 1262439 ID=MsG0480018181.01.T01:cds;Parent=MsG0480018181.01.T01
Chr4 CDS 1262918 1263232 1262918 ID=MsG0480018181.01.T01:cds;Parent=MsG0480018181.01.T01
Gene Sequence

>MsG0480018181.01.T01

ATGTCGCTGATTGAATTGCGATCGGAGACTCAGGAGGATGCGATCGAAGACGGCGGAGGATGGGATTGTTCGGAGACTGAGAAGTTTCGATCGGAAGAGGATGCGATCGACCGGAGATCCACAGAGATCCGCCGGAGAAGGATTGACGGTGGGAATGATCGGAGACAGAGGATGATGCGTTCAATCGGAGACGGAGGAGATAGAGATCCACCGGAGCTAGAGACAGAGGAGGATACGTCGATCGGAGATGGTGGAAGAAGAGGTCGCACGGAGGAAGTGATGGTGGAAGAAACACGAAATTGTGAAAATTCCACTAGGACAAAATCATCCGTATTTTTTTCACCCCATTTGAATGGTTATTTTCGTTACTCTTTTGGTTATGATAATTCCACGGGAACTTATGAGGTGGTAGCGTTCCGTATTGAGCATGATAAGGAGCATGATATTGCAAGAAGCGAGGTGAAAGTTCTCAGCGTGGGGGATAGTTCTTGGAGAAATATTCAATGTTTCGATGAGCTTCCAATTTATAAGTTTGATGGGAGTCAAAAGAGAGGTGTCTATTTGAATGGTACTATTAACTGGTTGGCCCTTTGCGGATACAAATATTTAAATGATCATTCATATTGGGGTTATTCTAGTGCGACTGTTGAGCAACATGAAACCTATTTAGTTAAATGGCAGATGAAGGATTTTGGAGTTCAAGAATCATGGATTCAATTATTTAAAATTAGTTATCAGAGTTTCTATTCATACTACAAATATCGTGGAACAAGGTGTATCTTTCGATGGTTGAAATTGGTTCCATTGTGTCTTTCTAAGAATGGTGATACCCTAATATTGTCAAATCGTCTAGATGAGAAAGCATTTATCTATAACTGCAAAGACAATAGAGCAGAGCAAATTCAAATTACGAATGACATATCGTGGCTAGATGCCATGTATTACGTGGAAAGTATGGTTTCGGCTCATTAA
Protein sequence

>MsG0480018181.01.T01

MSLIELRSETQEDAIEDGGGWDCSETEKFRSEEDAIDRRSTEIRRRRIDGGNDRRQRMMRSIGDGGDRDPPELETEEDTSIGDGGRRGRTEEVMVEETRNCENSTRTKSSVFFSPHLNGYFRYSFGYDNSTGTYEVVAFRIEHDKEHDIARSEVKVLSVGDSSWRNIQCFDELPIYKFDGSQKRGVYLNGTINWLALCGYKYLNDHSYWGYSSATVEQHETYLVKWQMKDFGVQESWIQLFKISYQSFYSYYKYRGTRCIFRWLKLVPLCLSKNGDTLILSNRLDEKAFIYNCKDNRAEQIQITNDISWLDAMYYVESMVSAH*