AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0480018915.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0480018915.01.T01 MTR_4g030110 50.424 236 102 6 1 222 69 303 2.81e-65 208
MsG0480018915.01.T01 MTR_3g464470 48.291 234 99 5 1 222 46 269 5.90e-62 199
MsG0480018915.01.T01 MTR_4g030830 46.639 238 106 9 1 222 48 280 1.38e-58 191
MsG0480018915.01.T01 MTR_3g464500 46.639 238 100 6 1 222 66 292 3.96e-58 190
MsG0480018915.01.T01 MTR_4g030980 43.774 265 103 7 1 221 54 316 4.15e-58 191
MsG0480018915.01.T01 MTR_4g031020 43.233 266 105 7 1 222 54 317 2.44e-57 189
MsG0480018915.01.T01 MTR_4g019990 45.000 240 110 6 1 222 45 280 4.50e-57 187
MsG0480018915.01.T01 MTR_4g024890 45.339 236 104 11 1 222 49 273 3.70e-51 171
MsG0480018915.01.T01 MTR_1g112010 44.493 227 91 7 1 220 19 217 9.34e-51 169
MsG0480018915.01.T01 MTR_6g055210 41.841 239 115 8 2 220 62 296 1.14e-47 164
MsG0480018915.01.T01 MTR_4g030090 42.292 253 122 10 1 238 53 296 6.98e-47 160
MsG0480018915.01.T01 MTR_3g080370 40.408 245 113 8 1 220 60 296 2.29e-43 152
MsG0480018915.01.T01 MTR_6g016285 42.276 246 107 11 1 220 60 296 6.94e-43 151
MsG0480018915.01.T01 MTR_7g056503 40.336 238 115 7 1 220 60 288 2.51e-42 149
MsG0480018915.01.T01 MTR_8g101940 48.165 218 92 11 1 204 41 251 3.36e-42 148
MsG0480018915.01.T01 MTR_2g047892 40.598 234 106 9 1 214 61 281 3.88e-42 148
MsG0480018915.01.T01 MTR_2g461450 41.667 228 102 9 1 222 57 259 5.72e-41 144
MsG0480018915.01.T01 MTR_4g030760 42.291 227 99 10 1 219 112 314 3.54e-40 144
MsG0480018915.01.T01 MTR_7g060940 38.683 243 112 8 1 222 61 287 3.96e-40 143
MsG0480018915.01.T01 MTR_5g056020 37.402 254 120 12 2 220 57 306 4.20e-40 145
MsG0480018915.01.T01 MTR_8g066440 37.603 242 129 6 1 222 62 301 1.27e-38 139
MsG0480018915.01.T01 MTR_4g024870 43.439 221 102 11 1 204 83 297 7.59e-38 137
MsG0480018915.01.T01 MTR_7g056003 39.583 240 111 7 1 218 55 282 5.06e-37 135
MsG0480018915.01.T01 MTR_7g070830 38.298 235 107 6 23 222 83 314 1.92e-36 134
MsG0480018915.01.T01 MTR_7g066100 37.698 252 109 9 2 220 51 287 3.67e-36 132
MsG0480018915.01.T01 MTR_7g062060 37.647 255 113 12 1 220 51 294 5.60e-36 132
MsG0480018915.01.T01 MTR_4g030790 41.624 197 92 6 55 238 74 260 5.68e-36 130
MsG0480018915.01.T01 MTR_7g055987 38.197 233 115 9 1 222 60 274 8.99e-36 131
MsG0480018915.01.T01 MTR_4g006350 36.287 237 129 9 2 222 535 765 1.19e-35 135
MsG0480018915.01.T01 MTR_2g047200 38.075 239 115 10 1 218 59 285 1.56e-35 130
MsG0480018915.01.T01 MTR_1g088120 36.735 245 124 9 1 220 49 287 3.44e-35 130
MsG0480018915.01.T01 MTR_7g070880 35.938 256 126 6 2 222 61 313 7.30e-35 129
MsG0480018915.01.T01 MTR_0707s0020 34.050 279 117 9 1 220 65 335 7.33e-35 130
MsG0480018915.01.T01 MTR_7g066010 35.366 246 108 7 1 212 60 288 9.07e-35 128
MsG0480018915.01.T01 MTR_6g086920 34.432 273 112 9 1 214 77 341 9.51e-35 130
MsG0480018915.01.T01 MTR_7g056390 35.985 264 116 11 1 227 58 305 1.14e-34 129
MsG0480018915.01.T01 MTR_7g077910 43.182 176 77 6 57 218 42 208 1.55e-34 127
MsG0480018915.01.T01 MTR_7g070937 42.331 163 89 2 88 247 3 163 2.10e-34 122
MsG0480018915.01.T01 MTR_2g043410 34.884 258 123 10 1 227 61 304 2.77e-34 128
MsG0480018915.01.T01 MTR_4g013180 37.759 241 118 9 1 220 50 279 5.69e-34 128
MsG0480018915.01.T01 MTR_7g056290 35.632 261 121 10 1 227 62 309 6.16e-34 127
MsG0480018915.01.T01 MTR_7g066030 36.220 254 111 8 1 220 60 296 8.49e-34 126
MsG0480018915.01.T01 MTR_7g050480 37.447 235 117 9 2 222 62 280 9.06e-34 126
MsG0480018915.01.T01 MTR_7g050520 37.447 235 117 9 2 222 62 280 1.87e-33 125
MsG0480018915.01.T01 MTR_0128s0010 34.252 254 136 9 1 237 60 299 2.37e-33 125
MsG0480018915.01.T01 MTR_4g013185 37.850 214 106 7 27 220 93 299 1.11e-32 124
MsG0480018915.01.T01 MTR_5g011350 37.931 232 107 10 2 222 24 229 1.21e-32 120
MsG0480018915.01.T01 MTR_3g072470 35.385 260 122 10 1 227 59 305 3.35e-32 122
MsG0480018915.01.T01 MTR_7g028660 36.000 250 117 10 1 225 50 281 3.96e-32 121
MsG0480018915.01.T01 MTR_7g066000 36.555 238 109 12 2 214 65 285 9.22e-32 120
MsG0480018915.01.T01 MTR_7g077070 34.252 254 126 11 1 220 55 301 1.15e-31 121
MsG0480018915.01.T01 MTR_4g020000 47.518 141 69 3 83 222 99 235 1.59e-31 119
MsG0480018915.01.T01 MTR_2g043400 34.109 258 125 9 1 227 62 305 1.71e-31 120
MsG0480018915.01.T01 MTR_7g066040 39.306 173 82 4 57 206 25 197 1.76e-31 117
MsG0480018915.01.T01 MTR_3g437520 34.340 265 129 10 1 227 63 320 1.81e-31 121
MsG0480018915.01.T01 MTR_0097s0030 35.772 246 109 7 2 222 54 275 3.06e-31 119
MsG0480018915.01.T01 MTR_2g047240 35.772 246 109 7 2 222 54 275 3.06e-31 119
MsG0480018915.01.T01 MTR_7g060960 41.361 191 82 9 49 226 98 271 3.20e-31 119
MsG0480018915.01.T01 MTR_7g078840 35.496 262 122 9 1 220 49 305 3.26e-31 120
MsG0480018915.01.T01 MTR_7g445750 34.783 253 118 10 2 220 63 302 3.42e-31 118
MsG0480018915.01.T01 MTR_7g062100 37.849 251 108 12 1 223 63 293 3.95e-31 119
MsG0480018915.01.T01 MTR_7g078900 37.500 184 96 5 49 218 115 293 5.83e-31 119
MsG0480018915.01.T01 MTR_7g057270 34.252 254 136 11 1 228 65 313 7.62e-31 119
MsG0480018915.01.T01 MTR_7g070900 46.032 126 65 1 94 216 234 359 3.41e-30 117
MsG0480018915.01.T01 MTR_6g088385 44.253 174 72 7 71 225 53 220 3.92e-30 115
MsG0480018915.01.T01 MTR_1g047490 33.607 244 98 7 2 220 62 266 6.33e-30 114
MsG0480018915.01.T01 MTR_7g022600 36.992 246 115 12 1 212 62 301 6.70e-30 116
MsG0480018915.01.T01 MTR_7g445890 40.828 169 76 6 57 208 87 248 7.72e-30 115
MsG0480018915.01.T01 MTR_4g013175 36.681 229 111 8 23 225 89 309 7.94e-30 116
MsG0480018915.01.T01 MTR_6g092560 33.745 243 125 9 1 220 51 280 1.82e-29 115
MsG0480018915.01.T01 MTR_7g091630 34.274 248 127 12 1 222 71 308 1.99e-29 115
MsG0480018915.01.T01 MTR_7g066060 34.711 242 126 7 2 220 63 295 2.33e-29 115
MsG0480018915.01.T01 MTR_7g055930 33.208 265 122 9 1 220 52 306 3.42e-29 114
MsG0480018915.01.T01 MTR_0649s0020 34.008 247 126 9 1 224 50 282 3.93e-29 113
MsG0480018915.01.T01 MTR_2g047895 38.660 194 82 7 46 214 26 207 6.24e-29 112
MsG0480018915.01.T01 MTR_7g056260 36.777 242 119 11 1 222 53 280 6.58e-29 111
MsG0480018915.01.T01 MTR_7g066080 36.626 243 120 10 2 220 56 288 9.88e-29 113
MsG0480018915.01.T01 MTR_7g078940 36.502 263 128 13 22 253 115 369 1.72e-28 112
MsG0480018915.01.T01 MTR_7g055870 33.208 265 122 9 1 220 52 306 1.97e-28 112
MsG0480018915.01.T01 MTR_7g052150 33.333 237 127 11 1 221 61 282 7.62e-28 110
MsG0480018915.01.T01 MTR_7g061010 35.865 237 121 9 1 222 61 281 7.65e-28 110
MsG0480018915.01.T01 MTR_7g056760 34.454 238 121 10 1 214 62 288 1.05e-27 110
MsG0480018915.01.T01 MTR_7g056023 35.961 203 104 9 25 214 59 248 1.67e-27 107
MsG0480018915.01.T01 MTR_7g079160 33.613 238 111 9 27 225 91 320 2.20e-27 110
MsG0480018915.01.T01 MTR_5g096710 34.375 256 134 11 1 238 62 301 3.81e-27 108
MsG0480018915.01.T01 MTR_7g066850 34.234 222 118 10 1 208 62 269 4.95e-27 108
MsG0480018915.01.T01 MTR_5g058620 40.909 132 72 3 91 220 27 154 1.60e-26 104
MsG0480018915.01.T01 MTR_1g058870 40.909 132 72 3 91 220 27 154 1.60e-26 104
MsG0480018915.01.T01 MTR_4g129190 35.510 245 122 11 1 222 45 276 1.73e-26 106
MsG0480018915.01.T01 MTR_2g010900 30.081 246 139 9 1 222 22 258 1.86e-26 106
MsG0480018915.01.T01 MTR_5g043160 32.210 267 122 9 2 222 90 343 2.14e-26 107
MsG0480018915.01.T01 MTR_7g091640 31.950 241 140 8 1 222 71 306 2.53e-26 105
MsG0480018915.01.T01 MTR_0128s0020 34.483 232 109 8 1 207 57 270 3.57e-26 105
MsG0480018915.01.T01 MTR_7g078860 36.747 166 96 4 57 218 120 280 4.07e-26 105
MsG0480018915.01.T01 MTR_7g055977 33.621 232 120 10 1 214 46 261 7.33e-26 104
MsG0480018915.01.T01 MTR_0464s0020 32.210 267 129 11 1 227 63 317 7.70e-26 105
MsG0480018915.01.T01 MTR_4g033495 30.579 242 133 6 1 220 66 294 8.46e-26 105
MsG0480018915.01.T01 MTR_4g034860 28.625 269 146 10 1 238 61 314 9.10e-26 104
MsG0480018915.01.T01 MTR_4g008790 37.019 208 96 6 27 220 135 321 1.96e-25 104
MsG0480018915.01.T01 MTR_7g061090 30.736 231 135 5 22 238 93 312 2.46e-25 103
MsG0480018915.01.T01 MTR_7g078040 34.632 231 120 9 39 244 106 330 3.06e-25 103
MsG0480018915.01.T01 MTR_6g017295 33.668 199 111 6 25 208 10 202 3.35e-25 104
MsG0480018915.01.T01 MTR_7g077970 33.071 254 121 13 1 218 46 286 3.40e-25 103
MsG0480018915.01.T01 MTR_7g113500 31.633 196 116 5 41 222 79 270 4.91e-25 102
MsG0480018915.01.T01 MTR_0242s0060 32.143 280 138 15 1 241 48 314 5.73e-25 102
MsG0480018915.01.T01 MTR_0242s0040 32.143 280 138 15 1 241 48 314 5.73e-25 102
MsG0480018915.01.T01 MTR_2g010950 30.120 249 133 10 1 222 59 293 6.71e-25 102
MsG0480018915.01.T01 MTR_1g442850 32.636 239 127 9 1 220 44 267 7.07e-25 102
MsG0480018915.01.T01 MTR_7g056717 34.400 250 133 10 1 237 61 292 1.36e-24 101
MsG0480018915.01.T01 MTR_4g129160 40.107 187 81 11 57 224 119 293 1.59e-24 100
MsG0480018915.01.T01 MTR_7g061050 32.340 235 131 7 1 220 52 273 1.61e-24 100
MsG0480018915.01.T01 MTR_7g009265 34.000 200 108 8 26 208 1 193 1.83e-24 100
MsG0480018915.01.T01 MTR_7g077990 33.471 242 120 11 1 220 56 278 1.85e-24 100
MsG0480018915.01.T01 MTR_7g061060 34.872 195 98 6 57 237 111 290 1.94e-24 100
MsG0480018915.01.T01 MTR_6g017305 38.776 147 73 5 71 208 13 151 2.51e-24 99.0
MsG0480018915.01.T01 MTR_4g128320 41.290 155 78 6 71 218 41 189 3.51e-24 98.2
MsG0480018915.01.T01 MTR_0128s0070 32.468 231 114 8 1 207 61 273 4.46e-24 100
MsG0480018915.01.T01 MTR_1g029650 35.000 200 99 6 27 213 84 265 4.63e-24 100
MsG0480018915.01.T01 MTR_5g069760 33.624 229 108 9 1 209 45 249 5.54e-24 99.4
MsG0480018915.01.T01 MTR_7g056570 35.021 237 122 9 1 222 57 276 7.28e-24 99.8
MsG0480018915.01.T01 MTR_7g056710 34.468 235 121 9 1 220 57 273 1.53e-23 98.2
MsG0480018915.01.T01 MTR_7g056737 36.082 194 94 8 57 237 116 292 2.22e-23 98.2
MsG0480018915.01.T01 MTR_4g006840 35.407 209 96 8 2 201 39 217 2.26e-23 95.1
MsG0480018915.01.T01 MTR_7g066840 36.082 194 100 9 27 209 94 274 2.50e-23 97.8
MsG0480018915.01.T01 MTR_2g010920 28.462 260 143 11 1 222 59 313 2.55e-23 98.2
MsG0480018915.01.T01 MTR_7g056170 31.343 268 119 10 1 214 114 370 5.23e-23 97.4
MsG0480018915.01.T01 MTR_2g047878 34.759 187 78 4 46 218 101 257 5.98e-23 96.7
MsG0480018915.01.T01 MTR_7g078960 37.500 160 68 6 71 218 18 157 2.85e-22 93.6
MsG0480018915.01.T01 MTR_7g055830 36.994 173 76 5 73 220 74 238 3.69e-22 94.4
MsG0480018915.01.T01 MTR_4g037465 29.114 237 142 8 1 222 60 285 7.55e-22 94.0
MsG0480018915.01.T01 MTR_4g024910 44.030 134 62 5 1 123 22 153 1.11e-21 92.4
MsG0480018915.01.T01 MTR_7g052670 33.028 218 112 9 26 212 89 303 1.71e-21 93.2
MsG0480018915.01.T01 MTR_7g056173 41.007 139 56 5 89 214 19 144 2.02e-21 91.7
MsG0480018915.01.T01 MTR_6g017280 30.693 202 109 8 26 208 73 262 2.03e-21 92.4
MsG0480018915.01.T01 MTR_5g069930 30.870 230 118 8 1 209 45 254 2.29e-21 92.4
MsG0480018915.01.T01 MTR_5g068040 31.624 234 111 11 1 214 55 259 2.84e-21 92.0
MsG0480018915.01.T01 MTR_1g071010 36.036 222 112 9 1 207 54 260 3.36e-21 92.0
MsG0480018915.01.T01 MTR_7g037670 37.888 161 77 5 57 207 104 251 4.40e-21 90.9
MsG0480018915.01.T01 MTR_7g056200 30.453 243 115 10 1 222 62 271 9.29e-21 90.5
MsG0480018915.01.T01 MTR_7g061100 36.184 152 85 3 57 208 86 225 2.94e-20 88.6
MsG0480018915.01.T01 MTR_6g065510 35.404 161 79 6 73 222 74 220 4.58e-20 88.2
MsG0480018915.01.T01 MTR_6g017270 34.568 162 89 5 1 146 48 208 5.20e-20 88.2
MsG0480018915.01.T01 MTR_3g013470 29.046 241 127 9 1 220 34 251 2.16e-19 86.7
MsG0480018915.01.T01 MTR_2g006360 31.897 232 97 10 19 220 51 251 3.44e-19 85.9
MsG0480018915.01.T01 MTR_7g056820 33.728 169 101 5 59 222 109 271 1.25e-18 84.7
MsG0480018915.01.T01 MTR_2g437110 33.529 170 87 8 25 168 88 257 1.84e-18 84.7
MsG0480018915.01.T01 MTR_1g050542 31.818 198 97 9 21 208 116 285 1.92e-18 84.3
MsG0480018915.01.T01 MTR_8g030660 30.769 208 95 6 3 165 64 267 5.41e-18 81.3
MsG0480018915.01.T01 MTR_7g055953 37.209 129 61 4 98 222 91 203 1.09e-17 81.3
MsG0480018915.01.T01 MTR_2g017720 45.217 115 50 4 107 220 89 191 1.50e-17 81.6
MsG0480018915.01.T01 MTR_4g030880 49.505 101 42 4 118 216 42 135 1.55e-17 82.0
MsG0480018915.01.T01 MTR_1g054575 29.817 218 115 9 2 208 92 282 1.94e-17 82.0
MsG0480018915.01.T01 MTR_7g056797 31.064 235 129 10 1 213 62 285 4.25e-17 80.5
MsG0480018915.01.T01 MTR_1g097330 30.366 191 108 6 23 208 76 246 1.30e-16 79.0
MsG0480018915.01.T01 MTR_7g070440 29.961 257 128 11 2 229 47 280 1.36e-16 78.6
MsG0480018915.01.T01 MTR_3g007430 32.544 169 79 7 57 207 132 283 1.38e-16 79.0
MsG0480018915.01.T01 MTR_4g011660 29.461 241 116 7 22 225 86 309 1.51e-16 79.0
MsG0480018915.01.T01 MTR_3g007270 31.481 162 85 7 58 207 151 298 1.12e-15 76.3
MsG0480018915.01.T01 MTR_3g010390 30.275 218 122 9 6 207 78 281 2.49e-15 75.1
MsG0480018915.01.T01 MTR_2g029990 29.630 216 123 10 2 207 91 287 5.28e-15 74.3
MsG0480018915.01.T01 MTR_7g030040 30.396 227 80 10 6 214 81 247 6.63e-15 73.6
MsG0480018915.01.T01 MTR_0267s0050 28.070 228 134 8 1 207 45 263 1.04e-14 73.6
MsG0480018915.01.T01 MTR_1g097560 31.288 163 81 7 52 208 124 261 1.78e-14 72.8
MsG0480018915.01.T01 MTR_1g055070 31.250 192 108 9 2 171 90 279 2.43e-14 72.4
MsG0480018915.01.T01 MTR_4g031770 32.704 159 84 5 57 207 98 241 2.89e-14 72.0
MsG0480018915.01.T01 MTR_7g445570 42.169 83 40 2 95 170 8 89 4.17e-14 66.6
MsG0480018915.01.T01 MTR_1g097520 29.114 158 88 5 57 208 5 144 5.97e-14 68.2
MsG0480018915.01.T01 MTR_6g065980 31.579 152 77 6 60 207 111 239 6.44e-14 70.9
MsG0480018915.01.T01 MTR_1g094210 29.114 158 88 5 57 211 152 288 7.58e-14 70.9
MsG0480018915.01.T01 MTR_1g094210 29.114 158 88 5 57 211 152 288 8.60e-14 70.9
MsG0480018915.01.T01 MTR_4g107820 24.771 218 135 5 2 211 76 272 8.88e-14 70.9
MsG0480018915.01.T01 MTR_4g107820 24.771 218 135 5 2 211 76 272 8.91e-14 70.5
MsG0480018915.01.T01 MTR_4g107780 24.771 218 135 5 2 211 76 272 8.91e-14 70.5
MsG0480018915.01.T01 MTR_7g034310 38.655 119 59 4 96 214 16 120 9.00e-14 68.9
MsG0480018915.01.T01 MTR_4g107780 24.771 218 135 5 2 211 76 272 1.03e-13 70.5
MsG0480018915.01.T01 MTR_3g009290 33.987 153 77 8 58 201 120 257 1.28e-13 68.9
MsG0480018915.01.T01 MTR_8g101580 29.114 158 91 4 57 208 138 280 2.35e-13 69.3
MsG0480018915.01.T01 MTR_2g055970 29.193 161 88 6 56 208 304 446 3.46e-13 69.3
MsG0480018915.01.T01 MTR_1g097370 35.833 120 56 5 99 212 136 240 3.90e-13 68.9
MsG0480018915.01.T01 MTR_8g030630 37.383 107 42 2 114 220 269 350 4.06e-13 68.9
MsG0480018915.01.T01 MTR_8g030630 46.154 78 39 1 143 220 73 147 5.91e-13 68.6
MsG0480018915.01.T01 MTR_7g078880 32.407 108 67 2 110 214 93 197 5.58e-13 68.2
MsG0480018915.01.T01 MTR_6g081280 29.545 132 79 4 88 213 9 132 6.17e-13 67.0
MsG0480018915.01.T01 MTR_0760s0010 30.719 153 83 4 57 208 146 276 6.73e-13 68.2
MsG0480018915.01.T01 MTR_2g021190 29.012 162 88 5 56 207 115 259 8.24e-13 67.8
MsG0480018915.01.T01 MTR_1004s0010 31.333 150 80 4 60 208 119 246 1.17e-12 67.4
MsG0480018915.01.T01 MTR_7g066830 32.692 156 84 6 1 144 34 180 2.22e-12 64.3
MsG0480018915.01.T01 MTR_3g030250 29.817 218 111 10 2 207 77 264 2.25e-12 66.6
MsG0480018915.01.T01 MTR_4g061340 26.961 204 102 7 27 207 91 270 2.53e-12 66.2
MsG0480018915.01.T01 MTR_3g007390 35.345 116 53 5 97 207 2 100 2.63e-12 64.7
MsG0480018915.01.T01 MTR_6g053260 27.568 185 106 7 2 169 377 550 2.69e-12 66.6
MsG0480018915.01.T01 MTR_5g011200 29.121 182 110 6 2 172 58 231 3.20e-12 65.9
MsG0480018915.01.T01 MTR_3g007330 29.012 162 86 6 59 207 137 282 3.64e-12 65.9
MsG0480018915.01.T01 MTR_2g079810 27.354 223 122 10 1 205 45 245 8.63e-12 64.3
MsG0480018915.01.T01 MTR_3g030320 35.032 157 70 8 60 207 46 179 9.44e-12 64.3
MsG0480018915.01.T01 MTR_8g062660 30.319 188 69 8 57 212 116 273 1.58e-11 64.3
MsG0480018915.01.T01 MTR_6g004210 33.333 168 91 9 56 207 128 290 1.68e-11 63.9
MsG0480018915.01.T01 MTR_3g009300 27.607 163 86 7 58 208 98 240 4.48e-11 62.4
MsG0480018915.01.T01 MTR_3g024110 28.218 202 120 7 2 193 141 327 6.15e-11 62.4
MsG0480018915.01.T01 MTR_3g011060 29.480 173 92 8 22 173 91 254 6.26e-11 62.4
MsG0480018915.01.T01 MTR_3g030330 27.854 219 125 10 2 212 60 253 6.42e-11 62.0
MsG0480018915.01.T01 MTR_0044s0300 27.411 197 111 6 27 213 105 279 7.81e-11 62.0
MsG0480018915.01.T01 MTR_2g078870 30.000 120 74 2 75 194 78 187 7.90e-11 61.6
MsG0480018915.01.T01 MTR_5g007610 31.325 166 93 7 44 189 120 284 8.71e-11 62.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score

Find 48 sgRNAs with CRISPR-Local

Find 206 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGATCAGGAATGAAACTATT+TGG 0.210561 4:+11623866 MsG0480018915.01.T01:CDS
ATTTGAGTGGTACTATTAAT+TGG 0.270342 4:+11624202 MsG0480018915.01.T01:CDS
GCCCATAAAAGTGGAATAAC+AGG 0.274827 4:-11624153 None:intergenic
TACTTTGACCGAAACTTATA+AGG 0.298186 4:+11624029 MsG0480018915.01.T01:CDS
TGCCATGCTCCTTCGCTATA+CGG 0.306574 4:-11624062 None:intergenic
CTCGTGTACTCGATAATTCA+TGG 0.345622 4:+11623809 MsG0480018915.01.T01:CDS
TTATCGAGTACACGAGAAAC+TGG 0.362989 4:-11623802 None:intergenic
AGCTACCACCTTATAAGTTT+CGG 0.377876 4:-11624037 None:intergenic
TCATCTAAAGCAGTTGCATT+TGG 0.402790 4:-11627531 None:intergenic
GAAACTATTTGGATGGTTGC+TGG 0.403322 4:+11623877 MsG0480018915.01.T01:CDS
TCGATCAACACCACAAGCTT+TGG 0.433042 4:-11624375 None:intergenic
TCAGATTTAGTCCTAGTGGC+TGG 0.441379 4:-11623955 None:intergenic
TCAGTTATGTGCTTCTGAAA+AGG 0.445574 4:+11627473 MsG0480018915.01.T01:intron
ATCATTTCCATGGATTGATC+AGG 0.448227 4:+11623851 MsG0480018915.01.T01:CDS
ATGCAATGGATTAATCTACT+TGG 0.481053 4:+11623903 MsG0480018915.01.T01:CDS
ATTCACTATGATCATTTCCA+TGG 0.483139 4:+11623841 MsG0480018915.01.T01:CDS
AAGTTGAGTGTGTGTGTCAA+TGG 0.487692 4:-11624313 None:intergenic
GGATGTTATTGCTTTAAATG+AGG 0.492389 4:+11627494 MsG0480018915.01.T01:CDS
AACAATGGTGTTTATTTGAG+TGG 0.493766 4:+11624189 MsG0480018915.01.T01:CDS
ATGGTTGCTGGTTCATGCAA+TGG 0.497160 4:+11623889 MsG0480018915.01.T01:CDS
ATCAACACCACAAGCTTTGG+CGG 0.500956 4:-11624372 None:intergenic
TAATGATAAGCCCATAAAAG+TGG 0.513411 4:-11624162 None:intergenic
CAGATTTAGTCCTAGTGGCT+GGG 0.534977 4:-11623954 None:intergenic
ACGTCATCCGCCAAAGCTTG+TGG 0.543308 4:+11624365 MsG0480018915.01.T01:CDS
TTGGCTGTCAGCGATTACTT+TGG 0.551456 4:+11624225 MsG0480018915.01.T01:CDS
AAAAGTGGAATAACAGGGAA+AGG 0.552944 4:-11624147 None:intergenic
GAGTGGTACTATTAATTGGT+TGG 0.558351 4:+11624206 MsG0480018915.01.T01:CDS
TGCTTTAGATGATGATGAAG+TGG 0.562355 4:+11627542 MsG0480018915.01.T01:CDS
TTTCATTCCTGATCAATCCA+TGG 0.566834 4:-11623858 None:intergenic
ACAAGCTTTGGCGGATGACG+TGG 0.568789 4:-11624363 None:intergenic
GCAAAGTTAGAGCTAGGTGC+GGG 0.573232 4:-11623750 None:intergenic
CTCCGTATAGCGAAGGAGCA+TGG 0.574442 4:+11624060 MsG0480018915.01.T01:CDS
TCCAAGCGCATTTCTCAATG+TGG 0.577661 4:-11627579 None:intergenic
GCTTATCATTATTATAACAA+TGG 0.582217 4:+11624174 MsG0480018915.01.T01:CDS
CCCATAAAAGTGGAATAACA+GGG 0.585451 4:-11624152 None:intergenic
AAAATCAGATTTAGTCCTAG+TGG 0.586212 4:-11623959 None:intergenic
TTGGTGGCAAAGTTAGAGCT+AGG 0.594916 4:-11623756 None:intergenic
CAGGAATGAAACTATTTGGA+TGG 0.605139 4:+11623870 MsG0480018915.01.T01:CDS
GTACAAATGACATCAAACAT+TGG 0.617606 4:-11623775 None:intergenic
ATGGAAATGATCATAGTGAA+TGG 0.632781 4:-11623839 None:intergenic
GGCAAAGTTAGAGCTAGGTG+CGG 0.634267 4:-11623751 None:intergenic
TTTGACCGAAACTTATAAGG+TGG 0.640873 4:+11624032 MsG0480018915.01.T01:CDS
CAAATGACATCAAACATTGG+TGG 0.641220 4:-11623772 None:intergenic
TATCGAGTACACGAGAAACT+GGG 0.653367 4:-11623801 None:intergenic
GGTAGCTCTCCGTATAGCGA+AGG 0.662340 4:+11624053 MsG0480018915.01.T01:CDS
GAAATGATCATAGTGAATGG+TGG 0.703630 4:-11623836 None:intergenic
GAGTACACGAGAAACTGGGA+TGG 0.722948 4:-11623797 None:intergenic
GGCAGCTTATTAAAGCCCTG+AGG 0.740574 4:-11624342 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAGCTTATAAAATAAAATAT+TGG + Chr4:11626847-11626866 MsG0480018915.01.T01:intron 10.0%
!! ATATTTAAATACAAGTTTAA+GGG - Chr4:11627338-11627357 None:intergenic 10.0%
!! AAAAAAAAATAGAGAGAATT+CGG - Chr4:11627422-11627441 None:intergenic 15.0%
!! ACTAAAAATATAAGTGATAT+AGG - Chr4:11625094-11625113 None:intergenic 15.0%
!! CATATTTAAATACAAGTTTA+AGG - Chr4:11627339-11627358 None:intergenic 15.0%
!!! ATAAGCTTTAAATACAAATT+AGG - Chr4:11625059-11625078 None:intergenic 15.0%
!!! ATTGACTTTATCATAAATTA+AGG - Chr4:11625009-11625028 None:intergenic 15.0%
!!! TTCTTAATCTATTACTATTT+TGG - Chr4:11626633-11626652 None:intergenic 15.0%
!! AAACAAAGGAAGTTAATATA+TGG + Chr4:11626669-11626688 MsG0480018915.01.T01:intron 20.0%
!! ATAAACTCAAACAAGTAATA+TGG - Chr4:11624736-11624755 None:intergenic 20.0%
!! GAATTACTGATAAAATATTC+TGG + Chr4:11624648-11624667 MsG0480018915.01.T01:intron 20.0%
!! GCTTATCATTATTATAACAA+TGG + Chr4:11624174-11624193 MsG0480018915.01.T01:CDS 20.0%
!! TAAACTCAAACAAGTAATAT+GGG - Chr4:11624735-11624754 None:intergenic 20.0%
!! TATTTCATTCCTGAAAAATA+AGG + Chr4:11626503-11626522 MsG0480018915.01.T01:intron 20.0%
!! TTCTATATATAGAGATTAGT+TGG - Chr4:11627016-11627035 None:intergenic 20.0%
!!! AATAACTTTTTAGAAACGTT+TGG - Chr4:11626606-11626625 None:intergenic 20.0%
!!! ATTTTTAATATGGCAAATGA+AGG + Chr4:11624431-11624450 MsG0480018915.01.T01:intron 20.0%
!!! CTGTCATTTTTTCTTTTTAT+AGG + Chr4:11625537-11625556 MsG0480018915.01.T01:intron 20.0%
!!! TGTGTTGTAATTTTAATAGA+TGG + Chr4:11625946-11625965 MsG0480018915.01.T01:intron 20.0%
!!! TTGAGCAAACATTTTTAATA+TGG + Chr4:11624421-11624440 MsG0480018915.01.T01:intron 20.0%
! AAACTCAAACAAGTAATATG+GGG - Chr4:11624734-11624753 None:intergenic 25.0%
! ACTCATTCAACAATATAAAC+AGG - Chr4:11624842-11624861 None:intergenic 25.0%
! AGAATAAACTAGAGTTAGAT+AGG + Chr4:11626943-11626962 MsG0480018915.01.T01:intron 25.0%
! AGTGAACTTACAATTTAAAC+AGG - Chr4:11624942-11624961 None:intergenic 25.0%
! AGTTTAGTTAGAGTTAGTTA+GGG + Chr4:11626981-11627000 MsG0480018915.01.T01:intron 25.0%
! ATGTAATTATTCATATGCAC+TGG - Chr4:11626111-11626130 None:intergenic 25.0%
! ATTTGAGTGGTACTATTAAT+TGG + Chr4:11624202-11624221 MsG0480018915.01.T01:CDS 25.0%
! GATTAAGAAAATTGCAGTAA+TGG + Chr4:11626644-11626663 MsG0480018915.01.T01:intron 25.0%
! TACTGATAAAATATTCTGGT+CGG + Chr4:11624652-11624671 MsG0480018915.01.T01:intron 25.0%
! TAGTTTAGTTAGAGTTAGTT+AGG + Chr4:11626980-11626999 MsG0480018915.01.T01:intron 25.0%
! TTAGAACCAAATATTGTTGA+TGG + Chr4:11625253-11625272 MsG0480018915.01.T01:intron 25.0%
!! AAATTGAAAGATTTTGCTCA+TGG - Chr4:11626378-11626397 None:intergenic 25.0%
!! AATTGAAAGATTTTGCTCAT+GGG - Chr4:11626377-11626396 None:intergenic 25.0%
!! ATATTTATACTCTCCGTTTT+TGG + Chr4:11623929-11623948 MsG0480018915.01.T01:CDS 25.0%
!! ATTGTGCAAATTTTCACTTT+GGG + Chr4:11624099-11624118 MsG0480018915.01.T01:CDS 25.0%
!! TAACAATTTCTTTTCAGCAA+TGG + Chr4:11624499-11624518 MsG0480018915.01.T01:intron 25.0%
!! TGTTATGTAACTCTTAGTTT+TGG - Chr4:11626808-11626827 None:intergenic 25.0%
!! TTTTGAATTTATTGCGTTAG+TGG + Chr4:11625165-11625184 MsG0480018915.01.T01:intron 25.0%
!!! ATCTTGTTACCTTATTTTTC+AGG - Chr4:11626515-11626534 None:intergenic 25.0%
!!! TGTTTTTTAACAGTGTAACT+TGG + Chr4:11625922-11625941 MsG0480018915.01.T01:intron 25.0%
AAAATCAGATTTAGTCCTAG+TGG - Chr4:11623962-11623981 None:intergenic 30.0%
AACAATATAAACAGGCTAAG+AGG - Chr4:11624834-11624853 None:intergenic 30.0%
AACAATGGTGTTTATTTGAG+TGG + Chr4:11624189-11624208 MsG0480018915.01.T01:CDS 30.0%
AACATGGTAACTTGAAATTC+TGG + Chr4:11626545-11626564 MsG0480018915.01.T01:intron 30.0%
ACAAACACAAATCATCTTAG+TGG + Chr4:11626008-11626027 MsG0480018915.01.T01:intron 30.0%
AGTTATCATTTGATCAGTGA+TGG - Chr4:11624985-11625004 None:intergenic 30.0%
ATGGAAATGATCATAGTGAA+TGG - Chr4:11623842-11623861 None:intergenic 30.0%
ATTCACTATGATCATTTCCA+TGG + Chr4:11623841-11623860 MsG0480018915.01.T01:CDS 30.0%
CATCAAAACAAATTCCATGA+TGG + Chr4:11626904-11626923 MsG0480018915.01.T01:intron 30.0%
CATCACGTTTATTATTTCCT+TGG - Chr4:11625228-11625247 None:intergenic 30.0%
CATCTAACAAATTGTTCTCA+AGG + Chr4:11626722-11626741 MsG0480018915.01.T01:intron 30.0%
CTAAAGCTCAAGAATTTAAG+TGG + Chr4:11625752-11625771 MsG0480018915.01.T01:intron 30.0%
CTAAATATAGTTCCAACCTT+AGG - Chr4:11625289-11625308 None:intergenic 30.0%
CTTTATGATTCACGTGTTAT+TGG - Chr4:11625595-11625614 None:intergenic 30.0%
GAACAATGTAATGAATGGAA+GGG - Chr4:11627146-11627165 None:intergenic 30.0%
GAATACTCTTTATGCATTTC+TGG - Chr4:11626751-11626770 None:intergenic 30.0%
GACAATAGAGTCAAGAAAAT+TGG + Chr4:11624626-11624645 MsG0480018915.01.T01:intron 30.0%
GTAAGTTCACTCCTATAAAT+TGG + Chr4:11624951-11624970 MsG0480018915.01.T01:intron 30.0%
GTACAAATGACATCAAACAT+TGG - Chr4:11623778-11623797 None:intergenic 30.0%
GTACTAGATCTTTATAGTCA+TGG + Chr4:11625473-11625492 MsG0480018915.01.T01:intron 30.0%
GTTATCATTTGATCAGTGAT+GGG - Chr4:11624984-11625003 None:intergenic 30.0%
GTTATTGTTAAACGATCACA+TGG + Chr4:11624577-11624596 MsG0480018915.01.T01:intron 30.0%
TAATGATAAGCCCATAAAAG+TGG - Chr4:11624165-11624184 None:intergenic 30.0%
TACAATTTAAACAGGCTAAG+AGG - Chr4:11624934-11624953 None:intergenic 30.0%
TACTTTGACCGAAACTTATA+AGG + Chr4:11624029-11624048 MsG0480018915.01.T01:CDS 30.0%
TATGTATGTAAGCTCATCTT+TGG - Chr4:11625314-11625333 None:intergenic 30.0%
TCATCTCCATCAACAATATT+TGG - Chr4:11625262-11625281 None:intergenic 30.0%
TGAGTTTATTTGTCTGCATA+AGG + Chr4:11625780-11625799 MsG0480018915.01.T01:intron 30.0%
TGATCAGGAATGAAACTATT+TGG + Chr4:11623866-11623885 MsG0480018915.01.T01:CDS 30.0%
TGTTTATGTTGAGTCAATGT+AGG - Chr4:11626318-11626337 None:intergenic 30.0%
TTAGTAACTCCAAAACCTAT+AGG - Chr4:11625359-11625378 None:intergenic 30.0%
TTGATACTATTTAGAAGCAG+AGG + Chr4:11625638-11625657 MsG0480018915.01.T01:intron 30.0%
TTGATGCTATCACAGTAAAA+AGG - Chr4:11626890-11626909 None:intergenic 30.0%
! AATATGGCAAATGAAGGTTT+TGG + Chr4:11624437-11624456 MsG0480018915.01.T01:intron 30.0%
! AGAAGCACATAACTGAAATT+AGG - Chr4:11627469-11627488 None:intergenic 30.0%
! ATTGAAAGATTTTGCTCATG+GGG - Chr4:11626376-11626395 None:intergenic 30.0%
! ATTTAGTTTCTCATTCCCAA+CGG + Chr4:11627241-11627260 MsG0480018915.01.T01:intron 30.0%
! CATTGTGCAAATTTTCACTT+TGG + Chr4:11624098-11624117 MsG0480018915.01.T01:CDS 30.0%
! GGATGTTATTGCTTTAAATG+AGG + Chr4:11627494-11627513 MsG0480018915.01.T01:CDS 30.0%
! TGAATGAGTATTTTGTGTGA+TGG + Chr4:11624853-11624872 MsG0480018915.01.T01:intron 30.0%
! TGTGTGAATATTTTGTGTGA+TGG + Chr4:11624803-11624822 MsG0480018915.01.T01:intron 30.0%
! TTGCAGTAATGGAAAAACAA+AGG + Chr4:11626655-11626674 MsG0480018915.01.T01:intron 30.0%
! TTGTGCAAATTTTCACTTTG+GGG + Chr4:11624100-11624119 MsG0480018915.01.T01:CDS 30.0%
!! AAGGGTATTGATTTGATTTG+TGG - Chr4:11626248-11626267 None:intergenic 30.0%
!! ATGCAATGGATTAATCTACT+TGG + Chr4:11623903-11623922 MsG0480018915.01.T01:CDS 30.0%
!! ATGTTGTTTCTTTCTGAGAA+TGG + Chr4:11624545-11624564 MsG0480018915.01.T01:intron 30.0%
!! ATTGATTTGATTTGTGGTGT+AGG - Chr4:11626242-11626261 None:intergenic 30.0%
!! TGTTGTTTCTTTCTGAGAAT+GGG + Chr4:11624546-11624565 MsG0480018915.01.T01:intron 30.0%
!! TTTCAAGTTACCATGTTAAC+TGG - Chr4:11626542-11626561 None:intergenic 30.0%
AAAAGTGGAATAACAGGGAA+AGG - Chr4:11624150-11624169 None:intergenic 35.0%
AAGCAAGTTCTTATTCTTGC+AGG - Chr4:11627116-11627135 None:intergenic 35.0%
AATCATCTTAGTGGAAAGTG+AGG + Chr4:11626017-11626036 MsG0480018915.01.T01:intron 35.0%
ACAACGATAGATCATTCACA+TGG - Chr4:11625570-11625589 None:intergenic 35.0%
ACTAAACCTAGTAGCGAAAA+TGG + Chr4:11625374-11625393 MsG0480018915.01.T01:intron 35.0%
AGCTACCACCTTATAAGTTT+CGG - Chr4:11624040-11624059 None:intergenic 35.0%
ATATGGTGAATTGCTGATAC+AGG + Chr4:11626686-11626705 MsG0480018915.01.T01:intron 35.0%
ATTCATGACTACATGCAAGA+GGG - Chr4:11625422-11625441 None:intergenic 35.0%
CAAATGACATCAAACATTGG+TGG - Chr4:11623775-11623794 None:intergenic 35.0%
CAAGATATGTCCAGTTAACA+TGG + Chr4:11626529-11626548 MsG0480018915.01.T01:intron 35.0%
CACATAACTGAAATTAGGCA+AGG - Chr4:11627464-11627483 None:intergenic 35.0%
CAGGAATGAAACTATTTGGA+TGG + Chr4:11623870-11623889 MsG0480018915.01.T01:CDS 35.0%
CCCATAAAAGTGGAATAACA+GGG - Chr4:11624155-11624174 None:intergenic 35.0%
CTATACTGTAATAGCCATCA+TGG - Chr4:11626921-11626940 None:intergenic 35.0%
GAAATGATCATAGTGAATGG+TGG - Chr4:11623839-11623858 None:intergenic 35.0%
GAGTGGTACTATTAATTGGT+TGG + Chr4:11624206-11624225 MsG0480018915.01.T01:CDS 35.0%
GATGAAGAACAAATCTACCA+AGG + Chr4:11625208-11625227 MsG0480018915.01.T01:intron 35.0%
GCTATCACAGTAAAAAGGAT+TGG - Chr4:11626885-11626904 None:intergenic 35.0%
GCTATGTAAGCTACATTGTA+AGG + Chr4:11625824-11625843 MsG0480018915.01.T01:intron 35.0%
GGAACAATGTAATGAATGGA+AGG - Chr4:11627147-11627166 None:intergenic 35.0%
TAAAGACATGTAGCGATGAT+TGG + Chr4:11625610-11625629 MsG0480018915.01.T01:intron 35.0%
TAACTTTATGCCTCTAGCAT+AGG + Chr4:11625677-11625696 MsG0480018915.01.T01:intron 35.0%
TATGGTGAATTGCTGATACA+GGG + Chr4:11626687-11626706 MsG0480018915.01.T01:intron 35.0%
TCAAATGAAGCTCTATGTCA+AGG + Chr4:11627187-11627206 MsG0480018915.01.T01:intron 35.0%
TCAGGAATGAAATAAGTGTC+TGG - Chr4:11626497-11626516 None:intergenic 35.0%
TGATGGAGATGAAATACCTA+AGG + Chr4:11625270-11625289 MsG0480018915.01.T01:intron 35.0%
TGGAGGAACAATGTAATGAA+TGG - Chr4:11627151-11627170 None:intergenic 35.0%
TGGGTGATAAGCCAATTTAT+AGG - Chr4:11624965-11624984 None:intergenic 35.0%
TTGCATGTAGTCATGAATCA+TGG + Chr4:11625424-11625443 MsG0480018915.01.T01:intron 35.0%
TTTCATTCCTGATCAATCCA+TGG - Chr4:11623861-11623880 None:intergenic 35.0%
TTTGACCGAAACTTATAAGG+TGG + Chr4:11624032-11624051 MsG0480018915.01.T01:CDS 35.0%
! ACTTCAGAGTACTTGTGATT+TGG + Chr4:11626771-11626790 MsG0480018915.01.T01:intron 35.0%
! ATCATTTCCATGGATTGATC+AGG + Chr4:11623851-11623870 MsG0480018915.01.T01:CDS 35.0%
! CTTCAGAGTACTTGTGATTT+GGG + Chr4:11626772-11626791 MsG0480018915.01.T01:intron 35.0%
! GAATCTTTTCAGCACTCTTT+TGG + Chr4:11624000-11624019 MsG0480018915.01.T01:CDS 35.0%
! TCAGTTATGTGCTTCTGAAA+AGG + Chr4:11627473-11627492 MsG0480018915.01.T01:intron 35.0%
! TCATCTAAAGCAGTTGCATT+TGG - Chr4:11627534-11627553 None:intergenic 35.0%
! TGCTTTAGATGATGATGAAG+TGG + Chr4:11627542-11627561 MsG0480018915.01.T01:CDS 35.0%
! TGTGCAAATTTTCACTTTGG+GGG + Chr4:11624101-11624120 MsG0480018915.01.T01:CDS 35.0%
! TTGAAAGATTTTGCTCATGG+GGG - Chr4:11626375-11626394 None:intergenic 35.0%
!! CCCTGTTATTCCACTTTTAT+GGG + Chr4:11624152-11624171 MsG0480018915.01.T01:CDS 35.0%
!! GTTGTTTCTTTCTGAGAATG+GGG + Chr4:11624547-11624566 MsG0480018915.01.T01:intron 35.0%
!! TCCCTGTTATTCCACTTTTA+TGG + Chr4:11624151-11624170 MsG0480018915.01.T01:CDS 35.0%
!!! AAATGAAGGTTTTGGAGTTC+AGG + Chr4:11624445-11624464 MsG0480018915.01.T01:intron 35.0%
!!! ACTAGTTTTGTGAGGTTACA+AGG - Chr4:11626267-11626286 None:intergenic 35.0%
!!! CTAGTTTTGTGAGGTTACAA+GGG - Chr4:11626266-11626285 None:intergenic 35.0%
!!! GGAATGAAACTAGTTTTGTG+AGG - Chr4:11626275-11626294 None:intergenic 35.0%
!!! TTGCGATTTTGAGACTGATA+TGG + Chr4:11625028-11625047 MsG0480018915.01.T01:intron 35.0%
AACTCCAAAACCTATAGGCT+GGG - Chr4:11625354-11625373 None:intergenic 40.0%
AAGTTGAGTGTGTGTGTCAA+TGG - Chr4:11624316-11624335 None:intergenic 40.0%
ACATGCAATAAGCTGCCAAT+AGG + Chr4:11626216-11626235 MsG0480018915.01.T01:intron 40.0%
AGAGCTTCATTTGATGAGAG+TGG - Chr4:11627181-11627200 None:intergenic 40.0%
AGTTTAAACACGATCCAACG+AGG + Chr4:11626154-11626173 MsG0480018915.01.T01:intron 40.0%
ATTCAAGAACTCATGACCGT+TGG - Chr4:11627260-11627279 None:intergenic 40.0%
CAGCTTATTGCATGTTCTGT+AGG - Chr4:11626211-11626230 None:intergenic 40.0%
CTCGTGTACTCGATAATTCA+TGG + Chr4:11623809-11623828 MsG0480018915.01.T01:CDS 40.0%
CTTATTGCATGTTCTGTAGG+AGG - Chr4:11626208-11626227 None:intergenic 40.0%
GAAACTATTTGGATGGTTGC+TGG + Chr4:11623877-11623896 MsG0480018915.01.T01:CDS 40.0%
GATTCATGACTACATGCAAG+AGG - Chr4:11625423-11625442 None:intergenic 40.0%
GCCCATAAAAGTGGAATAAC+AGG - Chr4:11624156-11624175 None:intergenic 40.0%
GGAGATGAAATACCTAAGGT+TGG + Chr4:11625274-11625293 MsG0480018915.01.T01:intron 40.0%
GTAGTTATGATGTGGCTCAA+GGG + Chr4:11627216-11627235 MsG0480018915.01.T01:intron 40.0%
GTTCTTATTCTTGCAGGCTA+TGG - Chr4:11627110-11627129 None:intergenic 40.0%
TAACTCCAAAACCTATAGGC+TGG - Chr4:11625355-11625374 None:intergenic 40.0%
TATCGAGTACACGAGAAACT+GGG - Chr4:11623804-11623823 None:intergenic 40.0%
TCGCAATTACTCTCTCTACA+TGG - Chr4:11626473-11626492 None:intergenic 40.0%
TGTAAGCTACATTGTAAGGC+TGG + Chr4:11625828-11625847 MsG0480018915.01.T01:intron 40.0%
TGTAGTTATGATGTGGCTCA+AGG + Chr4:11627215-11627234 MsG0480018915.01.T01:intron 40.0%
TTATCGAGTACACGAGAAAC+TGG - Chr4:11623805-11623824 None:intergenic 40.0%
TTCAAGAACTCATGACCGTT+GGG - Chr4:11627259-11627278 None:intergenic 40.0%
TTGAGCCACATCATAACTAC+AGG - Chr4:11627216-11627235 None:intergenic 40.0%
! GATCGTGTTGATCATGTAGA+TGG - Chr4:11626296-11626315 None:intergenic 40.0%
! TCACTTTGGGGGATAATTCT+TGG + Chr4:11624112-11624131 MsG0480018915.01.T01:CDS 40.0%
! TCATCACCATTTTCGCTACT+AGG - Chr4:11625383-11625402 None:intergenic 40.0%
!!! GTTTTGGAGTTCAGGAATCT+TGG + Chr4:11624453-11624472 MsG0480018915.01.T01:intron 40.0%
AAGAGTTATGCCCAGCCTAT+AGG + Chr4:11625341-11625360 MsG0480018915.01.T01:intron 45.0%
AATATTCTGGTCGGAGACCA+AGG + Chr4:11624661-11624680 MsG0480018915.01.T01:intron 45.0%
CAAGGATTACGTCGAAAGTC+TGG + Chr4:11624679-11624698 MsG0480018915.01.T01:intron 45.0%
CACAAGCAATCCTATGCTAG+AGG - Chr4:11625690-11625709 None:intergenic 45.0%
CAGACTTTCGACGTAATCCT+TGG - Chr4:11624681-11624700 None:intergenic 45.0%
CAGATTTAGTCCTAGTGGCT+GGG - Chr4:11623957-11623976 None:intergenic 45.0%
CTCTCTACATGGCTTACTGT+TGG - Chr4:11626462-11626481 None:intergenic 45.0%
GATTTGTGGTGTAGGCCTAT+TGG - Chr4:11626234-11626253 None:intergenic 45.0%
GCGGATATGTTGCTCATTAG+TGG - Chr4:11626349-11626368 None:intergenic 45.0%
GGACTCCTGTAGTTATGATG+TGG + Chr4:11627208-11627227 MsG0480018915.01.T01:intron 45.0%
TACATGGCTTACTGTTGGAC+TGG - Chr4:11626457-11626476 None:intergenic 45.0%
TAGTGGCTGGGTTCCAAAAA+CGG - Chr4:11623945-11623964 None:intergenic 45.0%
TCAGATTTAGTCCTAGTGGC+TGG - Chr4:11623958-11623977 None:intergenic 45.0%
TCCAGTGCACAAGAGAATGA+GGG - Chr4:11627086-11627105 None:intergenic 45.0%
TCGATCAACACCACAAGCTT+TGG - Chr4:11624378-11624397 None:intergenic 45.0%
TTCCAGTGCACAAGAGAATG+AGG - Chr4:11627087-11627106 None:intergenic 45.0%
TTGATGAGAGTGGAGATCGA+TGG - Chr4:11627171-11627190 None:intergenic 45.0%
TTGGCTGTCAGCGATTACTT+TGG + Chr4:11624225-11624244 MsG0480018915.01.T01:CDS 45.0%
! ACTCAACTTTTGCTGCCTCA+GGG + Chr4:11624327-11624346 MsG0480018915.01.T01:CDS 45.0%
! ATCAACACCACAAGCTTTGG+CGG - Chr4:11624375-11624394 None:intergenic 45.0%
! TATGCCCAGCCTATAGGTTT+TGG + Chr4:11625347-11625366 MsG0480018915.01.T01:intron 45.0%
! TTGGTGGCAAAGTTAGAGCT+AGG - Chr4:11623759-11623778 None:intergenic 45.0%
!! ATGGTTGCTGGTTCATGCAA+TGG + Chr4:11623889-11623908 MsG0480018915.01.T01:CDS 45.0%
!!! TCTATTTTTTTTTATAATTT+AGG + Chr4:11627429-11627448 MsG0480018915.01.T01:intron 5.0%
ATGAGAGTGGAGATCGATGG+AGG - Chr4:11627168-11627187 None:intergenic 50.0%
CTTTCGCTCTATAGCCTCGT+TGG - Chr4:11626171-11626190 None:intergenic 50.0%
GAGTACACGAGAAACTGGGA+TGG - Chr4:11623800-11623819 None:intergenic 50.0%
GCAAAGTTAGAGCTAGGTGC+GGG - Chr4:11623753-11623772 None:intergenic 50.0%
GGCAAAGTTAGAGCTAGGTG+CGG - Chr4:11623754-11623773 None:intergenic 50.0%
GGCAGCTTATTAAAGCCCTG+AGG - Chr4:11624345-11624364 None:intergenic 50.0%
TCCCTCATTCTCTTGTGCAC+TGG + Chr4:11627082-11627101 MsG0480018915.01.T01:intron 50.0%
TGCCATGCTCCTTCGCTATA+CGG - Chr4:11624065-11624084 None:intergenic 50.0%
! ACATTGTAAGGCTGGTGCTG+TGG + Chr4:11625836-11625855 MsG0480018915.01.T01:intron 50.0%
! ATTTTGCTCATGGGGGTCTG+CGG - Chr4:11626368-11626387 None:intergenic 50.0%
! CACTCAACTTTTGCTGCCTC+AGG + Chr4:11624326-11624345 MsG0480018915.01.T01:CDS 50.0%
!! CATTGTAAGGCTGGTGCTGT+GGG + Chr4:11625837-11625856 MsG0480018915.01.T01:intron 50.0%
!! TGGTGCTGTGGGTTTAAGCT+TGG + Chr4:11625848-11625867 MsG0480018915.01.T01:intron 50.0%
!!! GTTTTTGGAACCCAGCCACT+AGG + Chr4:11623944-11623963 MsG0480018915.01.T01:CDS 50.0%
ACGTCATCCGCCAAAGCTTG+TGG + Chr4:11624365-11624384 MsG0480018915.01.T01:CDS 55.0%
CTCCGTATAGCGAAGGAGCA+TGG + Chr4:11624060-11624079 MsG0480018915.01.T01:CDS 55.0%
GGTAGCTCTCCGTATAGCGA+AGG + Chr4:11624053-11624072 MsG0480018915.01.T01:CDS 55.0%
! ACAAGCTTTGGCGGATGACG+TGG - Chr4:11624366-11624385 None:intergenic 55.0%
Chromosome Type Strat End Strand Name
Chr4 gene 11623724 11627587 11623724 ID=MsG0480018915.01;Name=MsG0480018915.01
Chr4 mRNA 11623724 11627587 11623724 ID=MsG0480018915.01.T01;Parent=MsG0480018915.01;Name=MsG0480018915.01.T01;_AED=0.40;_eAED=0.40;_QI=0|0|0|1|1|1|2|0|257
Chr4 exon 11623724 11624386 11623724 ID=MsG0480018915.01.T01:exon:7284;Parent=MsG0480018915.01.T01
Chr4 exon 11627477 11627587 11627477 ID=MsG0480018915.01.T01:exon:7285;Parent=MsG0480018915.01.T01
Chr4 CDS 11623724 11624386 11623724 ID=MsG0480018915.01.T01:cds;Parent=MsG0480018915.01.T01
Chr4 CDS 11627477 11627587 11627477 ID=MsG0480018915.01.T01:cds;Parent=MsG0480018915.01.T01
Gene Sequence

>MsG0480018915.01.T01

ATGCATCTCGAGAAATCAACACGAAACCCGCACCTAGCTCTAACTTTGCCACCAATGTTTGATGTCATTTGTACCATCCCAGTTTCTCGTGTACTCGATAATTCATGGACGACCACCATTCACTATGATCATTTCCATGGATTGATCAGGAATGAAACTATTTGGATGGTTGCTGGTTCATGCAATGGATTAATCTACTTGGTTTATATTTATACTCTCCGTTTTTGGAACCCAGCCACTAGGACTAAATCTGATTTTATTTCAGTTTCTTTGAATGAATCTTTTCAGCACTCTTTTGGTTATGATACTTTGACCGAAACTTATAAGGTGGTAGCTCTCCGTATAGCGAAGGAGCATGGCAATGCAGCAAGAAGCATTGTGCAAATTTTCACTTTGGGGGATAATTCTTGGAGAAATATTCATCCTTTCCCTGTTATTCCACTTTTATGGGCTTATCATTATTATAACAATGGTGTTTATTTGAGTGGTACTATTAATTGGTTGGCTGTCAGCGATTACTTTGGTTCTGATTTTCTACGTGCGCGTGATGTTACGATTGATCAATATGTGATTCTTTCACTTCATCTCTCCATTGACACACACACTCAACTTTTGCTGCCTCAGGGCTTTAATAAGCTGCCACGTCATCCGCCAAAGCTTGTGTTATGTGCTTCTGAAAAGGATGTTATTGCTTTAAATGAGGAAATGCAAAATCTGCCAAATGCAACTGCTTTAGATGATGATGAAGTGGAAATTCTACTTGATCCACATTGA
Protein sequence

>MsG0480018915.01.T01

MHLEKSTRNPHLALTLPPMFDVICTIPVSRVLDNSWTTTIHYDHFHGLIRNETIWMVAGSCNGLIYLVYIYTLRFWNPATRTKSDFISVSLNESFQHSFGYDTLTETYKVVALRIAKEHGNAARSIVQIFTLGDNSWRNIHPFPVIPLLWAYHYYNNGVYLSGTINWLAVSDYFGSDFLRARDVTIDQYVILSLHLSIDTHTQLLLPQGFNKLPRHPPKLVLCASEKDVIALNEEMQNLPNATALDDDEVEILLDPH*