Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0580025078.01.T01 | XP_024640929.1 | 94.705 | 491 | 26 | 0 | 1 | 491 | 1 | 491 | 0 | 966 |
| MsG0580025078.01.T02 | XP_024640929.1 | 94.705 | 491 | 26 | 0 | 1 | 491 | 1 | 491 | 0 | 966 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0580025078.01.T01 | Q8GXC7 | 26.479 | 355 | 212 | 14 | 39 | 379 | 36 | 355 | 1.94E-20 | 97.1 |
| MsG0580025078.01.T02 | Q8GXC7 | 26.479 | 355 | 212 | 14 | 39 | 379 | 36 | 355 | 1.94E-20 | 97.1 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0580025078.01.T01 | A0A072UCQ7 | 94.705 | 491 | 26 | 0 | 1 | 491 | 1 | 491 | 0.0 | 966 |
| MsG0580025078.01.T02 | A0A072UCQ7 | 94.705 | 491 | 26 | 0 | 1 | 491 | 1 | 491 | 0.0 | 966 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0180005285.01 | MsG0580025078.01 | 0.836279 | 1.026838e-56 | 1.288080e-53 |
| MsG0580025078.01 | MsG0580029541.01 | 0.811005 | 8.692734e-51 | 5.320294e-48 |
PPI
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0580025078.01.T01 | MTR_5g021880 | 94.705 | 491 | 26 | 0 | 1 | 491 | 1 | 491 | 0.0 | 966 |
| MsG0580025078.01.T01 | MTR_5g021880 | 93.443 | 488 | 30 | 1 | 1 | 486 | 1 | 488 | 0.0 | 942 |
| MsG0580025078.01.T01 | MTR_5g021880 | 94.926 | 473 | 24 | 0 | 1 | 473 | 1 | 473 | 0.0 | 936 |
| MsG0580025078.01.T01 | MTR_5g021860 | 81.391 | 489 | 77 | 4 | 1 | 489 | 1 | 475 | 0.0 | 805 |
| MsG0580025078.01.T01 | MTR_4g027370 | 80.453 | 486 | 81 | 4 | 1 | 486 | 1 | 472 | 0.0 | 790 |
| MsG0580025078.01.T01 | MTR_5g021860 | 81.607 | 473 | 73 | 4 | 1 | 473 | 1 | 459 | 0.0 | 782 |
| MsG0580025078.01.T01 | MTR_5g022900 | 73.790 | 496 | 113 | 7 | 1 | 493 | 1 | 482 | 0.0 | 714 |
| MsG0580025078.01.T01 | MTR_5g007940 | 72.617 | 493 | 90 | 5 | 1 | 493 | 1 | 448 | 0.0 | 687 |
| MsG0580025078.01.T01 | MTR_5g022040 | 66.068 | 501 | 151 | 5 | 1 | 493 | 1 | 490 | 0.0 | 648 |
| MsG0580025078.01.T01 | MTR_5g022045 | 61.677 | 501 | 142 | 7 | 1 | 493 | 1 | 459 | 0.0 | 597 |
| MsG0580025078.01.T01 | MTR_7g117100 | 75.773 | 388 | 54 | 2 | 101 | 488 | 1 | 348 | 0.0 | 593 |
| MsG0580025078.01.T01 | MTR_7g090810 | 60.373 | 482 | 127 | 8 | 1 | 472 | 1 | 428 | 0.0 | 555 |
| MsG0580025078.01.T01 | MTR_7g117100 | 87.636 | 275 | 34 | 0 | 101 | 375 | 1 | 275 | 8.17e-180 | 505 |
| MsG0580025078.01.T01 | MTR_5g010610 | 56.364 | 495 | 162 | 13 | 1 | 483 | 1 | 453 | 3.91e-172 | 496 |
| MsG0580025078.01.T01 | MTR_5g010550 | 54.389 | 524 | 174 | 9 | 1 | 493 | 1 | 490 | 1.00e-171 | 493 |
| MsG0580025078.01.T01 | MTR_0627s0010 | 58.228 | 474 | 130 | 13 | 1 | 461 | 1 | 419 | 1.94e-170 | 487 |
| MsG0580025078.01.T01 | MTR_5g010550 | 55.488 | 492 | 172 | 7 | 15 | 493 | 19 | 476 | 2.29e-168 | 484 |
| MsG0580025078.01.T01 | MTR_6g046320 | 63.524 | 403 | 109 | 7 | 1 | 387 | 1 | 381 | 6.62e-168 | 482 |
| MsG0580025078.01.T01 | MTR_5g022090 | 55.208 | 480 | 128 | 10 | 1 | 473 | 1 | 400 | 9.71e-168 | 479 |
| MsG0580025078.01.T01 | MTR_5g010560 | 55.601 | 491 | 169 | 10 | 15 | 493 | 19 | 472 | 1.16e-166 | 479 |
| MsG0580025078.01.T01 | MTR_7g090810 | 69.767 | 301 | 78 | 3 | 198 | 493 | 13 | 305 | 4.53e-150 | 431 |
| MsG0580025078.01.T01 | MTR_5g022750 | 48.606 | 502 | 148 | 12 | 1 | 493 | 1 | 401 | 4.15e-140 | 410 |
| MsG0580025078.01.T01 | MTR_5g010660 | 49.791 | 478 | 146 | 12 | 1 | 473 | 1 | 389 | 2.14e-135 | 399 |
| MsG0580025078.01.T01 | MTR_5g027370 | 47.200 | 500 | 197 | 15 | 1 | 492 | 1 | 441 | 5.78e-134 | 395 |
| MsG0580025078.01.T01 | MTR_5g027330 | 47.200 | 500 | 197 | 15 | 1 | 492 | 12 | 452 | 6.19e-134 | 395 |
| MsG0580025078.01.T01 | MTR_5g021920 | 60.900 | 289 | 77 | 6 | 1 | 275 | 1 | 267 | 8.54e-110 | 327 |
| MsG0580025078.01.T01 | MTR_4g134560 | 24.601 | 439 | 287 | 14 | 38 | 460 | 30 | 440 | 6.10e-27 | 113 |
| MsG0580025078.01.T01 | MTR_3g014540 | 26.559 | 433 | 235 | 17 | 11 | 433 | 2 | 361 | 4.44e-25 | 107 |
| MsG0580025078.01.T01 | MTR_3g006670 | 26.772 | 381 | 206 | 14 | 39 | 413 | 49 | 362 | 1.53e-24 | 105 |
| MsG0580025078.01.T01 | MTR_3g436150 | 27.551 | 392 | 210 | 15 | 34 | 413 | 27 | 356 | 6.35e-24 | 103 |
| MsG0580025078.01.T01 | MTR_7g407070 | 27.481 | 393 | 215 | 13 | 34 | 413 | 27 | 362 | 7.37e-23 | 100 |
| MsG0580025078.01.T01 | MTR_4g055060 | 26.110 | 383 | 210 | 11 | 39 | 413 | 30 | 347 | 1.82e-22 | 99.8 |
| MsG0580025078.01.T01 | MTR_3g007360 | 25.882 | 425 | 227 | 16 | 43 | 456 | 56 | 403 | 2.07e-22 | 99.8 |
| MsG0580025078.01.T01 | MTR_3g463170 | 46.000 | 100 | 54 | 0 | 1 | 100 | 54 | 153 | 4.28e-22 | 93.2 |
| MsG0580025078.01.T01 | MTR_5g074870 | 50.000 | 100 | 50 | 0 | 1 | 100 | 44 | 143 | 5.95e-22 | 92.4 |
| MsG0580025078.01.T01 | MTR_5g022420 | 26.846 | 447 | 236 | 17 | 13 | 450 | 2 | 366 | 1.21e-21 | 97.1 |
| MsG0580025078.01.T01 | MTR_3g007410 | 25.647 | 425 | 228 | 16 | 43 | 456 | 56 | 403 | 1.86e-21 | 96.7 |
| MsG0580025078.01.T01 | MTR_2g046800 | 27.820 | 399 | 225 | 17 | 39 | 424 | 14 | 362 | 4.28e-21 | 95.5 |
| MsG0580025078.01.T01 | MTR_3g006570 | 26.629 | 353 | 182 | 12 | 39 | 382 | 21 | 305 | 4.87e-21 | 95.1 |
| MsG0580025078.01.T01 | MTR_2g021155 | 27.157 | 394 | 208 | 17 | 39 | 423 | 33 | 356 | 7.50e-21 | 96.7 |
| MsG0580025078.01.T01 | MTR_3g024040 | 27.297 | 370 | 191 | 17 | 45 | 413 | 37 | 329 | 7.85e-21 | 94.4 |
| MsG0580025078.01.T01 | MTR_3g007270 | 26.410 | 390 | 215 | 18 | 34 | 413 | 42 | 369 | 1.41e-19 | 91.3 |
| MsG0580025078.01.T01 | MTR_8g101580 | 29.143 | 350 | 163 | 16 | 43 | 379 | 50 | 327 | 1.42e-19 | 90.9 |
| MsG0580025078.01.T01 | MTR_5g007610 | 26.016 | 369 | 177 | 17 | 38 | 382 | 40 | 336 | 1.50e-19 | 90.9 |
| MsG0580025078.01.T01 | MTR_3g014570 | 25.909 | 440 | 230 | 18 | 30 | 455 | 21 | 378 | 1.55e-19 | 90.9 |
| MsG0580025078.01.T01 | MTR_3g013770 | 26.722 | 363 | 197 | 14 | 39 | 393 | 33 | 334 | 2.05e-19 | 90.5 |
| MsG0580025078.01.T01 | MTR_0064s0160 | 23.282 | 451 | 280 | 13 | 20 | 457 | 23 | 420 | 2.29e-19 | 90.9 |
| MsG0580025078.01.T01 | MTR_0115s0020 | 24.603 | 378 | 204 | 15 | 31 | 382 | 2 | 324 | 5.72e-19 | 89.4 |
| MsG0580025078.01.T01 | MTR_1g017970 | 54.545 | 77 | 32 | 1 | 119 | 192 | 49 | 125 | 7.36e-19 | 82.8 |
| MsG0580025078.01.T01 | MTR_1g017970 | 42.478 | 113 | 56 | 3 | 1 | 109 | 1 | 108 | 8.75e-15 | 71.2 |
| MsG0580025078.01.T01 | MTR_3g013740 | 25.500 | 400 | 232 | 15 | 38 | 428 | 43 | 385 | 8.55e-19 | 89.0 |
| MsG0580025078.01.T01 | MTR_4g116330 | 27.297 | 370 | 187 | 16 | 19 | 378 | 6 | 303 | 8.67e-19 | 88.6 |
| MsG0580025078.01.T01 | MTR_4g061340 | 25.691 | 362 | 193 | 13 | 38 | 389 | 25 | 320 | 1.14e-18 | 88.2 |
| MsG0580025078.01.T01 | MTR_3g009240 | 25.773 | 388 | 210 | 15 | 1 | 382 | 1 | 316 | 1.81e-18 | 87.4 |
| MsG0580025078.01.T01 | MTR_5g070080 | 27.378 | 347 | 200 | 12 | 39 | 378 | 10 | 311 | 1.96e-18 | 87.4 |
| MsG0580025078.01.T01 | MTR_2g021190 | 27.174 | 368 | 192 | 16 | 25 | 382 | 7 | 308 | 2.05e-18 | 87.4 |
| MsG0580025078.01.T01 | MTR_1g050542 | 28.488 | 344 | 170 | 14 | 39 | 377 | 58 | 330 | 3.74e-18 | 87.0 |
| MsG0580025078.01.T01 | MTR_3g024110 | 25.281 | 356 | 189 | 13 | 38 | 388 | 100 | 383 | 4.15e-18 | 87.0 |
| MsG0580025078.01.T01 | MTR_3g009310 | 25.000 | 388 | 215 | 13 | 34 | 415 | 37 | 354 | 4.59e-18 | 86.7 |
| MsG0580025078.01.T01 | MTR_3g011060 | 26.050 | 357 | 193 | 15 | 38 | 382 | 27 | 324 | 7.77e-18 | 85.9 |
| MsG0580025078.01.T01 | MTR_5g070088 | 27.642 | 369 | 211 | 12 | 39 | 397 | 7 | 329 | 1.34e-17 | 85.1 |
| MsG0580025078.01.T01 | MTR_2g046920 | 26.377 | 345 | 186 | 11 | 39 | 379 | 24 | 304 | 1.45e-17 | 84.7 |
| MsG0580025078.01.T01 | MTR_3g083640 | 26.136 | 352 | 190 | 11 | 34 | 382 | 50 | 334 | 1.87e-17 | 84.7 |
| MsG0580025078.01.T01 | MTR_5g057790 | 26.997 | 363 | 182 | 14 | 38 | 389 | 45 | 335 | 2.20e-17 | 84.3 |
| MsG0580025078.01.T01 | MTR_6g065980 | 26.724 | 348 | 176 | 13 | 38 | 382 | 15 | 286 | 2.88e-17 | 83.6 |
| MsG0580025078.01.T01 | MTR_2g021150 | 24.942 | 429 | 243 | 15 | 39 | 458 | 14 | 372 | 6.56e-17 | 82.8 |
| MsG0580025078.01.T01 | MTR_3g007330 | 26.446 | 363 | 179 | 17 | 38 | 388 | 47 | 333 | 6.60e-17 | 82.8 |
| MsG0580025078.01.T01 | MTR_3g007430 | 24.928 | 349 | 188 | 13 | 42 | 382 | 46 | 328 | 6.92e-17 | 82.8 |
| MsG0580025078.01.T01 | MTR_3g011020 | 25.521 | 384 | 203 | 14 | 38 | 415 | 27 | 333 | 9.04e-17 | 82.4 |
| MsG0580025078.01.T01 | MTR_2g025420 | 26.359 | 368 | 200 | 13 | 37 | 382 | 4 | 322 | 9.27e-17 | 82.8 |
| MsG0580025078.01.T01 | MTR_3g011100 | 24.675 | 385 | 220 | 15 | 38 | 413 | 234 | 557 | 1.49e-16 | 82.8 |
| MsG0580025078.01.T01 | MTR_3g036290 | 25.762 | 361 | 180 | 13 | 39 | 391 | 22 | 302 | 1.57e-16 | 81.6 |
| MsG0580025078.01.T01 | MTR_6g027910 | 26.039 | 361 | 195 | 16 | 43 | 387 | 13 | 317 | 1.82e-16 | 81.6 |
| MsG0580025078.01.T01 | MTR_5g048160 | 25.337 | 371 | 205 | 14 | 36 | 382 | 1 | 323 | 1.84e-16 | 81.6 |
| MsG0580025078.01.T01 | MTR_3g034180 | 25.564 | 399 | 199 | 13 | 3 | 378 | 92 | 415 | 1.94e-16 | 82.0 |
| MsG0580025078.01.T01 | MTR_5g046300 | 25.926 | 351 | 182 | 15 | 39 | 382 | 4 | 283 | 2.65e-16 | 80.5 |
| MsG0580025078.01.T01 | MTR_5g046290 | 25.926 | 351 | 182 | 15 | 39 | 382 | 4 | 283 | 2.65e-16 | 80.5 |
| MsG0580025078.01.T01 | MTR_3g058440 | 26.994 | 326 | 171 | 11 | 34 | 348 | 30 | 299 | 3.03e-16 | 79.7 |
| MsG0580025078.01.T01 | MTR_3g036335 | 25.556 | 360 | 180 | 12 | 38 | 382 | 40 | 326 | 3.16e-16 | 80.9 |
| MsG0580025078.01.T01 | MTR_3g034130 | 24.157 | 356 | 191 | 8 | 39 | 378 | 9 | 301 | 3.30e-16 | 80.5 |
| MsG0580025078.01.T01 | MTR_0760s0010 | 27.011 | 348 | 168 | 16 | 44 | 382 | 52 | 322 | 3.64e-16 | 80.9 |
| MsG0580025078.01.T01 | MTR_4g031770 | 24.079 | 353 | 192 | 13 | 39 | 382 | 4 | 289 | 5.40e-16 | 80.1 |
| MsG0580025078.01.T01 | MTR_3g010430 | 24.176 | 364 | 181 | 11 | 38 | 382 | 35 | 322 | 1.06e-15 | 79.3 |
| MsG0580025078.01.T01 | MTR_6g007135 | 25.762 | 361 | 187 | 15 | 36 | 380 | 23 | 318 | 1.78e-15 | 78.6 |
| MsG0580025078.01.T01 | MTR_6g053240 | 24.937 | 397 | 216 | 15 | 34 | 417 | 23 | 350 | 2.81e-15 | 78.2 |
| MsG0580025078.01.T01 | MTR_1g054575 | 27.479 | 353 | 164 | 15 | 39 | 377 | 52 | 326 | 2.85e-15 | 79.0 |
| MsG0580025078.01.T01 | MTR_3g006530 | 24.784 | 347 | 200 | 10 | 39 | 382 | 40 | 328 | 4.21e-15 | 77.4 |
| MsG0580025078.01.T01 | MTR_3g083010 | 24.938 | 405 | 216 | 17 | 37 | 414 | 4 | 347 | 1.08e-14 | 76.3 |
| MsG0580025078.01.T01 | MTR_1g055375 | 25.145 | 346 | 196 | 15 | 43 | 382 | 8 | 296 | 1.36e-14 | 75.5 |
| MsG0580025078.01.T01 | MTR_4g116330 | 25.000 | 364 | 164 | 13 | 19 | 378 | 6 | 264 | 2.15e-14 | 74.7 |
| MsG0580025078.01.T01 | MTR_2g031720 | 23.077 | 403 | 222 | 16 | 39 | 425 | 6 | 336 | 3.04e-14 | 74.7 |
| MsG0580025078.01.T01 | MTR_1g112930 | 25.145 | 346 | 183 | 13 | 38 | 377 | 24 | 299 | 3.18e-14 | 74.7 |
| MsG0580025078.01.T01 | MTR_2g028130 | 24.936 | 393 | 222 | 14 | 39 | 414 | 5 | 341 | 4.25e-14 | 74.3 |
| MsG0580025078.01.T01 | MTR_1g114700 | 25.635 | 433 | 242 | 22 | 34 | 455 | 24 | 387 | 5.23e-14 | 73.9 |
| MsG0580025078.01.T01 | MTR_6g048120 | 25.341 | 367 | 181 | 15 | 38 | 382 | 35 | 330 | 5.55e-14 | 73.9 |
| MsG0580025078.01.T01 | MTR_3g030350 | 24.064 | 374 | 194 | 15 | 38 | 399 | 34 | 329 | 1.21e-13 | 72.8 |
| MsG0580025078.01.T01 | MTR_5g096910 | 24.869 | 382 | 229 | 14 | 39 | 413 | 17 | 347 | 1.27e-13 | 72.8 |
| MsG0580025078.01.T01 | MTR_6g048140 | 25.210 | 357 | 196 | 11 | 34 | 382 | 34 | 327 | 4.38e-13 | 71.2 |
| MsG0580025078.01.T01 | MTR_4g070550 | 23.706 | 367 | 201 | 13 | 39 | 382 | 5 | 315 | 5.60e-12 | 67.8 |
| MsG0580025078.01.T01 | MTR_2g426070 | 24.390 | 410 | 226 | 18 | 37 | 425 | 4 | 350 | 7.87e-12 | 67.4 |
| MsG0580025078.01.T01 | MTR_1g068860 | 26.068 | 234 | 156 | 7 | 177 | 400 | 85 | 311 | 1.09e-11 | 67.0 |
| MsG0580025078.01.T01 | MTR_4g133170 | 21.245 | 273 | 187 | 8 | 177 | 438 | 84 | 339 | 1.51e-11 | 66.6 |
| MsG0580025078.01.T01 | MTR_2g426090 | 24.185 | 368 | 196 | 17 | 37 | 382 | 4 | 310 | 1.78e-11 | 66.2 |
| MsG0580025078.01.T01 | MTR_2g426060 | 23.515 | 404 | 222 | 16 | 37 | 418 | 4 | 342 | 1.84e-11 | 66.2 |
| MsG0580025078.01.T01 | MTR_2g034700 | 22.190 | 347 | 216 | 10 | 39 | 382 | 14 | 309 | 1.90e-11 | 66.2 |
| MsG0580025078.01.T01 | MTR_6g053260 | 26.877 | 253 | 139 | 12 | 180 | 417 | 433 | 654 | 2.36e-11 | 66.6 |
| MsG0580025078.01.T01 | MTR_3g010450 | 31.613 | 155 | 90 | 8 | 179 | 330 | 85 | 226 | 4.92e-11 | 63.5 |
| MsG0580025078.01.T01 | MTR_8g433030 | 46.154 | 91 | 41 | 2 | 39 | 128 | 40 | 123 | 6.29e-11 | 64.3 |
| MsG0580025078.01.T01 | MTR_7g066000 | 27.273 | 242 | 109 | 11 | 181 | 382 | 118 | 332 | 7.86e-11 | 64.3 |
| MsG0580025078.01.T01 | MTR_3g009300 | 28.270 | 237 | 145 | 9 | 182 | 413 | 98 | 314 | 9.12e-11 | 63.9 |
| MsG0580025078.01.T02 | MTR_5g021880 | 94.705 | 491 | 26 | 0 | 1 | 491 | 1 | 491 | 0.0 | 966 |
| MsG0580025078.01.T02 | MTR_5g021880 | 93.443 | 488 | 30 | 1 | 1 | 486 | 1 | 488 | 0.0 | 942 |
| MsG0580025078.01.T02 | MTR_5g021880 | 94.926 | 473 | 24 | 0 | 1 | 473 | 1 | 473 | 0.0 | 936 |
| MsG0580025078.01.T02 | MTR_5g021860 | 81.391 | 489 | 77 | 4 | 1 | 489 | 1 | 475 | 0.0 | 805 |
| MsG0580025078.01.T02 | MTR_4g027370 | 80.453 | 486 | 81 | 4 | 1 | 486 | 1 | 472 | 0.0 | 790 |
| MsG0580025078.01.T02 | MTR_5g021860 | 81.607 | 473 | 73 | 4 | 1 | 473 | 1 | 459 | 0.0 | 782 |
| MsG0580025078.01.T02 | MTR_5g022900 | 73.790 | 496 | 113 | 7 | 1 | 493 | 1 | 482 | 0.0 | 714 |
| MsG0580025078.01.T02 | MTR_5g007940 | 72.617 | 493 | 90 | 5 | 1 | 493 | 1 | 448 | 0.0 | 687 |
| MsG0580025078.01.T02 | MTR_5g022040 | 66.068 | 501 | 151 | 5 | 1 | 493 | 1 | 490 | 0.0 | 648 |
| MsG0580025078.01.T02 | MTR_5g022045 | 61.677 | 501 | 142 | 7 | 1 | 493 | 1 | 459 | 0.0 | 597 |
| MsG0580025078.01.T02 | MTR_7g117100 | 75.773 | 388 | 54 | 2 | 101 | 488 | 1 | 348 | 0.0 | 593 |
| MsG0580025078.01.T02 | MTR_7g090810 | 60.373 | 482 | 127 | 8 | 1 | 472 | 1 | 428 | 0.0 | 555 |
| MsG0580025078.01.T02 | MTR_7g117100 | 87.636 | 275 | 34 | 0 | 101 | 375 | 1 | 275 | 8.17e-180 | 505 |
| MsG0580025078.01.T02 | MTR_5g010610 | 56.364 | 495 | 162 | 13 | 1 | 483 | 1 | 453 | 3.91e-172 | 496 |
| MsG0580025078.01.T02 | MTR_5g010550 | 54.389 | 524 | 174 | 9 | 1 | 493 | 1 | 490 | 1.00e-171 | 493 |
| MsG0580025078.01.T02 | MTR_0627s0010 | 58.228 | 474 | 130 | 13 | 1 | 461 | 1 | 419 | 1.94e-170 | 487 |
| MsG0580025078.01.T02 | MTR_5g010550 | 55.488 | 492 | 172 | 7 | 15 | 493 | 19 | 476 | 2.29e-168 | 484 |
| MsG0580025078.01.T02 | MTR_6g046320 | 63.524 | 403 | 109 | 7 | 1 | 387 | 1 | 381 | 6.62e-168 | 482 |
| MsG0580025078.01.T02 | MTR_5g022090 | 55.208 | 480 | 128 | 10 | 1 | 473 | 1 | 400 | 9.71e-168 | 479 |
| MsG0580025078.01.T02 | MTR_5g010560 | 55.601 | 491 | 169 | 10 | 15 | 493 | 19 | 472 | 1.16e-166 | 479 |
| MsG0580025078.01.T02 | MTR_7g090810 | 69.767 | 301 | 78 | 3 | 198 | 493 | 13 | 305 | 4.53e-150 | 431 |
| MsG0580025078.01.T02 | MTR_5g022750 | 48.606 | 502 | 148 | 12 | 1 | 493 | 1 | 401 | 4.15e-140 | 410 |
| MsG0580025078.01.T02 | MTR_5g010660 | 49.791 | 478 | 146 | 12 | 1 | 473 | 1 | 389 | 2.14e-135 | 399 |
| MsG0580025078.01.T02 | MTR_5g027370 | 47.200 | 500 | 197 | 15 | 1 | 492 | 1 | 441 | 5.78e-134 | 395 |
| MsG0580025078.01.T02 | MTR_5g027330 | 47.200 | 500 | 197 | 15 | 1 | 492 | 12 | 452 | 6.19e-134 | 395 |
| MsG0580025078.01.T02 | MTR_5g021920 | 60.900 | 289 | 77 | 6 | 1 | 275 | 1 | 267 | 8.54e-110 | 327 |
| MsG0580025078.01.T02 | MTR_4g134560 | 24.601 | 439 | 287 | 14 | 38 | 460 | 30 | 440 | 6.10e-27 | 113 |
| MsG0580025078.01.T02 | MTR_3g014540 | 26.559 | 433 | 235 | 17 | 11 | 433 | 2 | 361 | 4.44e-25 | 107 |
| MsG0580025078.01.T02 | MTR_3g006670 | 26.772 | 381 | 206 | 14 | 39 | 413 | 49 | 362 | 1.53e-24 | 105 |
| MsG0580025078.01.T02 | MTR_3g436150 | 27.551 | 392 | 210 | 15 | 34 | 413 | 27 | 356 | 6.35e-24 | 103 |
| MsG0580025078.01.T02 | MTR_7g407070 | 27.481 | 393 | 215 | 13 | 34 | 413 | 27 | 362 | 7.37e-23 | 100 |
| MsG0580025078.01.T02 | MTR_4g055060 | 26.110 | 383 | 210 | 11 | 39 | 413 | 30 | 347 | 1.82e-22 | 99.8 |
| MsG0580025078.01.T02 | MTR_3g007360 | 25.882 | 425 | 227 | 16 | 43 | 456 | 56 | 403 | 2.07e-22 | 99.8 |
| MsG0580025078.01.T02 | MTR_3g463170 | 46.000 | 100 | 54 | 0 | 1 | 100 | 54 | 153 | 4.28e-22 | 93.2 |
| MsG0580025078.01.T02 | MTR_5g074870 | 50.000 | 100 | 50 | 0 | 1 | 100 | 44 | 143 | 5.95e-22 | 92.4 |
| MsG0580025078.01.T02 | MTR_5g022420 | 26.846 | 447 | 236 | 17 | 13 | 450 | 2 | 366 | 1.21e-21 | 97.1 |
| MsG0580025078.01.T02 | MTR_3g007410 | 25.647 | 425 | 228 | 16 | 43 | 456 | 56 | 403 | 1.86e-21 | 96.7 |
| MsG0580025078.01.T02 | MTR_2g046800 | 27.820 | 399 | 225 | 17 | 39 | 424 | 14 | 362 | 4.28e-21 | 95.5 |
| MsG0580025078.01.T02 | MTR_3g006570 | 26.629 | 353 | 182 | 12 | 39 | 382 | 21 | 305 | 4.87e-21 | 95.1 |
| MsG0580025078.01.T02 | MTR_2g021155 | 27.157 | 394 | 208 | 17 | 39 | 423 | 33 | 356 | 7.50e-21 | 96.7 |
| MsG0580025078.01.T02 | MTR_3g024040 | 27.297 | 370 | 191 | 17 | 45 | 413 | 37 | 329 | 7.85e-21 | 94.4 |
| MsG0580025078.01.T02 | MTR_3g007270 | 26.410 | 390 | 215 | 18 | 34 | 413 | 42 | 369 | 1.41e-19 | 91.3 |
| MsG0580025078.01.T02 | MTR_8g101580 | 29.143 | 350 | 163 | 16 | 43 | 379 | 50 | 327 | 1.42e-19 | 90.9 |
| MsG0580025078.01.T02 | MTR_5g007610 | 26.016 | 369 | 177 | 17 | 38 | 382 | 40 | 336 | 1.50e-19 | 90.9 |
| MsG0580025078.01.T02 | MTR_3g014570 | 25.909 | 440 | 230 | 18 | 30 | 455 | 21 | 378 | 1.55e-19 | 90.9 |
| MsG0580025078.01.T02 | MTR_3g013770 | 26.722 | 363 | 197 | 14 | 39 | 393 | 33 | 334 | 2.05e-19 | 90.5 |
| MsG0580025078.01.T02 | MTR_0064s0160 | 23.282 | 451 | 280 | 13 | 20 | 457 | 23 | 420 | 2.29e-19 | 90.9 |
| MsG0580025078.01.T02 | MTR_0115s0020 | 24.603 | 378 | 204 | 15 | 31 | 382 | 2 | 324 | 5.72e-19 | 89.4 |
| MsG0580025078.01.T02 | MTR_1g017970 | 54.545 | 77 | 32 | 1 | 119 | 192 | 49 | 125 | 7.36e-19 | 82.8 |
| MsG0580025078.01.T02 | MTR_1g017970 | 42.478 | 113 | 56 | 3 | 1 | 109 | 1 | 108 | 8.75e-15 | 71.2 |
| MsG0580025078.01.T02 | MTR_3g013740 | 25.500 | 400 | 232 | 15 | 38 | 428 | 43 | 385 | 8.55e-19 | 89.0 |
| MsG0580025078.01.T02 | MTR_4g116330 | 27.297 | 370 | 187 | 16 | 19 | 378 | 6 | 303 | 8.67e-19 | 88.6 |
| MsG0580025078.01.T02 | MTR_4g061340 | 25.691 | 362 | 193 | 13 | 38 | 389 | 25 | 320 | 1.14e-18 | 88.2 |
| MsG0580025078.01.T02 | MTR_3g009240 | 25.773 | 388 | 210 | 15 | 1 | 382 | 1 | 316 | 1.81e-18 | 87.4 |
| MsG0580025078.01.T02 | MTR_5g070080 | 27.378 | 347 | 200 | 12 | 39 | 378 | 10 | 311 | 1.96e-18 | 87.4 |
| MsG0580025078.01.T02 | MTR_2g021190 | 27.174 | 368 | 192 | 16 | 25 | 382 | 7 | 308 | 2.05e-18 | 87.4 |
| MsG0580025078.01.T02 | MTR_1g050542 | 28.488 | 344 | 170 | 14 | 39 | 377 | 58 | 330 | 3.74e-18 | 87.0 |
| MsG0580025078.01.T02 | MTR_3g024110 | 25.281 | 356 | 189 | 13 | 38 | 388 | 100 | 383 | 4.15e-18 | 87.0 |
| MsG0580025078.01.T02 | MTR_3g009310 | 25.000 | 388 | 215 | 13 | 34 | 415 | 37 | 354 | 4.59e-18 | 86.7 |
| MsG0580025078.01.T02 | MTR_3g011060 | 26.050 | 357 | 193 | 15 | 38 | 382 | 27 | 324 | 7.77e-18 | 85.9 |
| MsG0580025078.01.T02 | MTR_5g070088 | 27.642 | 369 | 211 | 12 | 39 | 397 | 7 | 329 | 1.34e-17 | 85.1 |
| MsG0580025078.01.T02 | MTR_2g046920 | 26.377 | 345 | 186 | 11 | 39 | 379 | 24 | 304 | 1.45e-17 | 84.7 |
| MsG0580025078.01.T02 | MTR_3g083640 | 26.136 | 352 | 190 | 11 | 34 | 382 | 50 | 334 | 1.87e-17 | 84.7 |
| MsG0580025078.01.T02 | MTR_5g057790 | 26.997 | 363 | 182 | 14 | 38 | 389 | 45 | 335 | 2.20e-17 | 84.3 |
| MsG0580025078.01.T02 | MTR_6g065980 | 26.724 | 348 | 176 | 13 | 38 | 382 | 15 | 286 | 2.88e-17 | 83.6 |
| MsG0580025078.01.T02 | MTR_2g021150 | 24.942 | 429 | 243 | 15 | 39 | 458 | 14 | 372 | 6.56e-17 | 82.8 |
| MsG0580025078.01.T02 | MTR_3g007330 | 26.446 | 363 | 179 | 17 | 38 | 388 | 47 | 333 | 6.60e-17 | 82.8 |
| MsG0580025078.01.T02 | MTR_3g007430 | 24.928 | 349 | 188 | 13 | 42 | 382 | 46 | 328 | 6.92e-17 | 82.8 |
| MsG0580025078.01.T02 | MTR_3g011020 | 25.521 | 384 | 203 | 14 | 38 | 415 | 27 | 333 | 9.04e-17 | 82.4 |
| MsG0580025078.01.T02 | MTR_2g025420 | 26.359 | 368 | 200 | 13 | 37 | 382 | 4 | 322 | 9.27e-17 | 82.8 |
| MsG0580025078.01.T02 | MTR_3g011100 | 24.675 | 385 | 220 | 15 | 38 | 413 | 234 | 557 | 1.49e-16 | 82.8 |
| MsG0580025078.01.T02 | MTR_3g036290 | 25.762 | 361 | 180 | 13 | 39 | 391 | 22 | 302 | 1.57e-16 | 81.6 |
| MsG0580025078.01.T02 | MTR_6g027910 | 26.039 | 361 | 195 | 16 | 43 | 387 | 13 | 317 | 1.82e-16 | 81.6 |
| MsG0580025078.01.T02 | MTR_5g048160 | 25.337 | 371 | 205 | 14 | 36 | 382 | 1 | 323 | 1.84e-16 | 81.6 |
| MsG0580025078.01.T02 | MTR_3g034180 | 25.564 | 399 | 199 | 13 | 3 | 378 | 92 | 415 | 1.94e-16 | 82.0 |
| MsG0580025078.01.T02 | MTR_5g046300 | 25.926 | 351 | 182 | 15 | 39 | 382 | 4 | 283 | 2.65e-16 | 80.5 |
| MsG0580025078.01.T02 | MTR_5g046290 | 25.926 | 351 | 182 | 15 | 39 | 382 | 4 | 283 | 2.65e-16 | 80.5 |
| MsG0580025078.01.T02 | MTR_3g058440 | 26.994 | 326 | 171 | 11 | 34 | 348 | 30 | 299 | 3.03e-16 | 79.7 |
| MsG0580025078.01.T02 | MTR_3g036335 | 25.556 | 360 | 180 | 12 | 38 | 382 | 40 | 326 | 3.16e-16 | 80.9 |
| MsG0580025078.01.T02 | MTR_3g034130 | 24.157 | 356 | 191 | 8 | 39 | 378 | 9 | 301 | 3.30e-16 | 80.5 |
| MsG0580025078.01.T02 | MTR_0760s0010 | 27.011 | 348 | 168 | 16 | 44 | 382 | 52 | 322 | 3.64e-16 | 80.9 |
| MsG0580025078.01.T02 | MTR_4g031770 | 24.079 | 353 | 192 | 13 | 39 | 382 | 4 | 289 | 5.40e-16 | 80.1 |
| MsG0580025078.01.T02 | MTR_3g010430 | 24.176 | 364 | 181 | 11 | 38 | 382 | 35 | 322 | 1.06e-15 | 79.3 |
| MsG0580025078.01.T02 | MTR_6g007135 | 25.762 | 361 | 187 | 15 | 36 | 380 | 23 | 318 | 1.78e-15 | 78.6 |
| MsG0580025078.01.T02 | MTR_6g053240 | 24.937 | 397 | 216 | 15 | 34 | 417 | 23 | 350 | 2.81e-15 | 78.2 |
| MsG0580025078.01.T02 | MTR_1g054575 | 27.479 | 353 | 164 | 15 | 39 | 377 | 52 | 326 | 2.85e-15 | 79.0 |
| MsG0580025078.01.T02 | MTR_3g006530 | 24.784 | 347 | 200 | 10 | 39 | 382 | 40 | 328 | 4.21e-15 | 77.4 |
| MsG0580025078.01.T02 | MTR_3g083010 | 24.938 | 405 | 216 | 17 | 37 | 414 | 4 | 347 | 1.08e-14 | 76.3 |
| MsG0580025078.01.T02 | MTR_1g055375 | 25.145 | 346 | 196 | 15 | 43 | 382 | 8 | 296 | 1.36e-14 | 75.5 |
| MsG0580025078.01.T02 | MTR_4g116330 | 25.000 | 364 | 164 | 13 | 19 | 378 | 6 | 264 | 2.15e-14 | 74.7 |
| MsG0580025078.01.T02 | MTR_2g031720 | 23.077 | 403 | 222 | 16 | 39 | 425 | 6 | 336 | 3.04e-14 | 74.7 |
| MsG0580025078.01.T02 | MTR_1g112930 | 25.145 | 346 | 183 | 13 | 38 | 377 | 24 | 299 | 3.18e-14 | 74.7 |
| MsG0580025078.01.T02 | MTR_2g028130 | 24.936 | 393 | 222 | 14 | 39 | 414 | 5 | 341 | 4.25e-14 | 74.3 |
| MsG0580025078.01.T02 | MTR_1g114700 | 25.635 | 433 | 242 | 22 | 34 | 455 | 24 | 387 | 5.23e-14 | 73.9 |
| MsG0580025078.01.T02 | MTR_6g048120 | 25.341 | 367 | 181 | 15 | 38 | 382 | 35 | 330 | 5.55e-14 | 73.9 |
| MsG0580025078.01.T02 | MTR_3g030350 | 24.064 | 374 | 194 | 15 | 38 | 399 | 34 | 329 | 1.21e-13 | 72.8 |
| MsG0580025078.01.T02 | MTR_5g096910 | 24.869 | 382 | 229 | 14 | 39 | 413 | 17 | 347 | 1.27e-13 | 72.8 |
| MsG0580025078.01.T02 | MTR_6g048140 | 25.210 | 357 | 196 | 11 | 34 | 382 | 34 | 327 | 4.38e-13 | 71.2 |
| MsG0580025078.01.T02 | MTR_4g070550 | 23.706 | 367 | 201 | 13 | 39 | 382 | 5 | 315 | 5.60e-12 | 67.8 |
| MsG0580025078.01.T02 | MTR_2g426070 | 24.390 | 410 | 226 | 18 | 37 | 425 | 4 | 350 | 7.87e-12 | 67.4 |
| MsG0580025078.01.T02 | MTR_1g068860 | 26.068 | 234 | 156 | 7 | 177 | 400 | 85 | 311 | 1.09e-11 | 67.0 |
| MsG0580025078.01.T02 | MTR_4g133170 | 21.245 | 273 | 187 | 8 | 177 | 438 | 84 | 339 | 1.51e-11 | 66.6 |
| MsG0580025078.01.T02 | MTR_2g426090 | 24.185 | 368 | 196 | 17 | 37 | 382 | 4 | 310 | 1.78e-11 | 66.2 |
| MsG0580025078.01.T02 | MTR_2g426060 | 23.515 | 404 | 222 | 16 | 37 | 418 | 4 | 342 | 1.84e-11 | 66.2 |
| MsG0580025078.01.T02 | MTR_2g034700 | 22.190 | 347 | 216 | 10 | 39 | 382 | 14 | 309 | 1.90e-11 | 66.2 |
| MsG0580025078.01.T02 | MTR_6g053260 | 26.877 | 253 | 139 | 12 | 180 | 417 | 433 | 654 | 2.36e-11 | 66.6 |
| MsG0580025078.01.T02 | MTR_3g010450 | 31.613 | 155 | 90 | 8 | 179 | 330 | 85 | 226 | 4.92e-11 | 63.5 |
| MsG0580025078.01.T02 | MTR_8g433030 | 46.154 | 91 | 41 | 2 | 39 | 128 | 40 | 123 | 6.29e-11 | 64.3 |
| MsG0580025078.01.T02 | MTR_7g066000 | 27.273 | 242 | 109 | 11 | 181 | 382 | 118 | 332 | 7.86e-11 | 64.3 |
| MsG0580025078.01.T02 | MTR_3g009300 | 28.270 | 237 | 145 | 9 | 182 | 413 | 98 | 314 | 9.12e-11 | 63.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0580025078.01.T01 | AT3G06240 | 26.479 | 355 | 212 | 14 | 39 | 379 | 36 | 355 | 1.98e-21 | 97.1 |
| MsG0580025078.01.T01 | AT3G07870 | 25.503 | 447 | 229 | 15 | 36 | 447 | 25 | 402 | 3.35e-20 | 93.2 |
| MsG0580025078.01.T02 | AT3G06240 | 26.479 | 355 | 212 | 14 | 39 | 379 | 36 | 355 | 1.98e-21 | 97.1 |
| MsG0580025078.01.T02 | AT3G07870 | 25.503 | 447 | 229 | 15 | 36 | 447 | 25 | 402 | 3.35e-20 | 93.2 |
Find 54 sgRNAs with CRISPR-Local
Find 219 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AACGCTTTACCATCGAAATT+AGG | 0.209192 | 5:-13606231 | MsG0580025078.01.T01:five_prime_UTR |
| TTATCTGATGGTGAAGAATT+TGG | 0.226645 | 5:-13603702 | MsG0580025078.01.T01:three_prime_UTR |
| CAGTAGGCAGGGTTATAATT+TGG | 0.280923 | 5:-13603434 | MsG0580025078.01.T01:three_prime_UTR |
| TAGATAACTCATTACAATTC+AGG | 0.296350 | 5:+13603150 | None:intergenic |
| ACGCTTTACCATCGAAATTA+GGG | 0.307518 | 5:-13606230 | MsG0580025078.01.T01:five_prime_UTR |
| AAAGCAGACGTACTCTTCTT+AGG | 0.317939 | 5:+13603665 | None:intergenic |
| TAGACTTCGTCATGTAATAT+TGG | 0.329666 | 5:-13603590 | MsG0580025078.01.T01:intron |
| TCGTCCGTTGCTGAGGCTTT+TGG | 0.335887 | 5:-13603490 | MsG0580025078.01.T01:three_prime_UTR |
| ACTCATTACAATTCAGGCTT+AGG | 0.354361 | 5:+13603156 | None:intergenic |
| GTTGAGAGGGAATGGGGTTA+AGG | 0.355421 | 5:+13606287 | None:intergenic |
| CATTCTTTCATCAATCTTGT+TGG | 0.355950 | 5:-13606254 | MsG0580025078.01.T01:five_prime_UTR |
| GTGTGCAAAGTTTAAATTGC+GGG | 0.372520 | 5:-13603825 | MsG0580025078.01.T01:CDS |
| AGGGAATGGGGTTAAGGGTG+AGG | 0.386076 | 5:+13606293 | None:intergenic |
| GAAGAGTACAACTGATTAGA+AGG | 0.397370 | 5:-13603466 | MsG0580025078.01.T01:three_prime_UTR |
| TCATTAACTGCTCCTTGAAA+AGG | 0.399355 | 5:-13603190 | MsG0580025078.01.T01:three_prime_UTR |
| TTGAGAGGGAATGGGGTTAA+GGG | 0.404148 | 5:+13606288 | None:intergenic |
| GTTTAAATTGCGGGAAGAAA+AGG | 0.420012 | 5:-13603816 | MsG0580025078.01.T01:CDS |
| CTTTCAAGTCTCAAACAATC+TGG | 0.423332 | 5:+13603774 | None:intergenic |
| CTCATTACAATTCAGGCTTA+GGG | 0.426523 | 5:+13603157 | None:intergenic |
| ACGTCTGCTTTCGTATTGAT+TGG | 0.428365 | 5:-13603653 | MsG0580025078.01.T01:intron |
| TATCTATGCTTTAACGAGGC+TGG | 0.431747 | 5:-13603314 | MsG0580025078.01.T01:three_prime_UTR |
| CATTAACTGCTCCTTGAAAA+GGG | 0.435707 | 5:-13603189 | MsG0580025078.01.T01:three_prime_UTR |
| AGGAATTTCAAACAGTAGGC+AGG | 0.441998 | 5:-13603446 | MsG0580025078.01.T01:three_prime_UTR |
| GGAATGGGGTTAAGGGTGAG+GGG | 0.456953 | 5:+13606295 | None:intergenic |
| GGAATTACCTCGAAGAAGTT+CGG | 0.464418 | 5:+13606205 | None:intergenic |
| CCAACGCTGTTGAGAGGGAA+TGG | 0.464537 | 5:+13606279 | None:intergenic |
| CAGTTAATGACTAGGAATCT+AGG | 0.468133 | 5:+13603203 | None:intergenic |
| ACCTTCGTCGTCCGTTGCTG+AGG | 0.487104 | 5:-13603497 | MsG0580025078.01.T01:three_prime_UTR |
| AGAAAAGCACATAGGAGATC+GGG | 0.488544 | 5:+13603242 | None:intergenic |
| GGGAATGGGGTTAAGGGTGA+GGG | 0.496108 | 5:+13606294 | None:intergenic |
| CAACGCTGTTGAGAGGGAAT+GGG | 0.498245 | 5:+13606280 | None:intergenic |
| ACGTACTCTTCTTAGGAAGC+AGG | 0.510696 | 5:+13603672 | None:intergenic |
| AAGAAAAGCACATAGGAGAT+CGG | 0.512540 | 5:+13603241 | None:intergenic |
| ACCTAAAATTGTAATAAGCA+AGG | 0.525144 | 5:+13603621 | None:intergenic |
| TCAAGGAGCAGTTAATGACT+AGG | 0.525661 | 5:+13603195 | None:intergenic |
| TAGGGTTCCGAACTTCTTCG+AGG | 0.533017 | 5:-13606212 | MsG0580025078.01.T01:intron |
| AAATTCTTCACCATCAGATA+AGG | 0.539351 | 5:+13603704 | None:intergenic |
| TAGAAGGAATTTCAAACAGT+AGG | 0.551313 | 5:-13603450 | MsG0580025078.01.T01:three_prime_UTR |
| CCATTCCCTCTCAACAGCGT+TGG | 0.559605 | 5:-13606279 | MsG0580025078.01.T01:five_prime_UTR |
| GGAATTTCAAACAGTAGGCA+GGG | 0.562476 | 5:-13603445 | MsG0580025078.01.T01:three_prime_UTR |
| CCTAAAATTGTAATAAGCAA+GGG | 0.563713 | 5:+13603622 | None:intergenic |
| GTTCGGAACCCTAATTTCGA+TGG | 0.567456 | 5:+13606222 | None:intergenic |
| ATATCCTCCTCCTTATCTGA+TGG | 0.569667 | 5:-13603714 | MsG0580025078.01.T01:three_prime_UTR |
| TAAATTGCGGGAAGAAAAGG+AGG | 0.577260 | 5:-13603813 | MsG0580025078.01.T01:CDS |
| AATGAACCAACGCTGTTGAG+AGG | 0.578260 | 5:+13606273 | None:intergenic |
| ATGAACCAACGCTGTTGAGA+GGG | 0.583742 | 5:+13606274 | None:intergenic |
| GCCTCAGCAACGGACGACGA+AGG | 0.599318 | 5:+13603496 | None:intergenic |
| TTCTTCACCATCAGATAAGG+AGG | 0.602336 | 5:+13603707 | None:intergenic |
| AACGCTGTTGAGAGGGAATG+GGG | 0.610242 | 5:+13606281 | None:intergenic |
| TTCACCATCAGATAAGGAGG+AGG | 0.612634 | 5:+13603710 | None:intergenic |
| TTCACCAAAAGCCTCAGCAA+CGG | 0.613207 | 5:+13603486 | None:intergenic |
| ATTGATGAAGAAAAGCACAT+AGG | 0.622452 | 5:+13603234 | None:intergenic |
| GGTGTGCAAAGTTTAAATTG+CGG | 0.672393 | 5:-13603826 | MsG0580025078.01.T01:CDS |
| TCATTATCTATGCTTTAACG+AGG | 0.675983 | 5:-13603318 | MsG0580025078.01.T01:three_prime_UTR |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TATAAATTAAAACAATATTG+GGG | + | Chr5:13605625-13605644 | None:intergenic | 10.0% |
| !! | AAAATAGTTTCAAATATAAC+TGG | + | Chr5:13605190-13605209 | None:intergenic | 15.0% |
| !! | AAATTTGATAAATATCATAG+AGG | + | Chr5:13603546-13603565 | None:intergenic | 15.0% |
| !! | AACTTTAATTGAAGAAATTT+GGG | + | Chr5:13603431-13603450 | None:intergenic | 15.0% |
| !! | TAACTTTAATTGAAGAAATT+TGG | + | Chr5:13603432-13603451 | None:intergenic | 15.0% |
| !!! | AAAAATACATTTCTAGTTTT+AGG | - | Chr5:13606083-13606102 | MsG0580025078.01.T01:intron | 15.0% |
| !!! | ATATTGGTGTTATTTTATAT+AGG | - | Chr5:13605899-13605918 | MsG0580025078.01.T01:intron | 15.0% |
| !! | ACCTAAAACTAATGAATATA+AGG | - | Chr5:13604335-13604354 | MsG0580025078.01.T01:intron | 20.0% |
| !! | CAAGTAATTAAAAGGAAATT+TGG | + | Chr5:13603376-13603395 | None:intergenic | 20.0% |
| !!! | AATCATAATAATGGATTTCT+TGG | - | Chr5:13604624-13604643 | MsG0580025078.01.T01:CDS | 20.0% |
| !!! | ACCTTATATTCATTAGTTTT+AGG | + | Chr5:13604339-13604358 | None:intergenic | 20.0% |
| !!! | TATATTCATTAGTTTTAGGT+TGG | + | Chr5:13604335-13604354 | None:intergenic | 20.0% |
| ! | AAAACAATATTGGGGAATAT+TGG | + | Chr5:13605617-13605636 | None:intergenic | 25.0% |
| ! | AAAGATGCAATAAAGCAAAA+GGG | - | Chr5:13603677-13603696 | MsG0580025078.01.T01:intron | 25.0% |
| ! | AACAAAATTGAAGTGAAAGA+AGG | + | Chr5:13603292-13603311 | None:intergenic | 25.0% |
| ! | AACACAAGAATACAAAAAGT+TGG | + | Chr5:13603501-13603520 | None:intergenic | 25.0% |
| ! | AAGTGATGCAAGTAATTAAA+AGG | + | Chr5:13603384-13603403 | None:intergenic | 25.0% |
| ! | AATATAAGGTGATAAACATG+TGG | - | Chr5:13604349-13604368 | MsG0580025078.01.T01:intron | 25.0% |
| ! | ACCTAAAATTGTAATAAGCA+AGG | + | Chr5:13605855-13605874 | None:intergenic | 25.0% |
| ! | ACGGAAGATTATCAAAATAA+GGG | + | Chr5:13603735-13603754 | None:intergenic | 25.0% |
| ! | ACTACACTAAGTTGTAAAAA+AGG | + | Chr5:13603613-13603632 | None:intergenic | 25.0% |
| ! | AGGTGGTATATATTAGATAA+CGG | + | Chr5:13605355-13605374 | None:intergenic | 25.0% |
| ! | ATAGTAGATAAAACAATTGC+AGG | + | Chr5:13604886-13604905 | None:intergenic | 25.0% |
| ! | ATATAAGGTGATAAACATGT+GGG | - | Chr5:13604350-13604369 | MsG0580025078.01.T01:intron | 25.0% |
| ! | ATGTCTGGAAATCATAATAA+TGG | - | Chr5:13604615-13604634 | MsG0580025078.01.T01:CDS | 25.0% |
| ! | CAATTACTATGACTTTGTAA+GGG | + | Chr5:13605114-13605133 | None:intergenic | 25.0% |
| ! | CATTGAAACATCAGATAAAA+AGG | + | Chr5:13604706-13604725 | None:intergenic | 25.0% |
| ! | CCTAAAATTGTAATAAGCAA+GGG | + | Chr5:13605854-13605873 | None:intergenic | 25.0% |
| ! | GTAGTCATGAAAAGAAAAAA+AGG | - | Chr5:13603628-13603647 | MsG0580025078.01.T01:intron | 25.0% |
| ! | TAGATAACTCATTACAATTC+AGG | + | Chr5:13606326-13606345 | None:intergenic | 25.0% |
| ! | TCAAATATAACTGGTAACAT+AGG | + | Chr5:13605181-13605200 | None:intergenic | 25.0% |
| ! | TCAATTACTATGACTTTGTA+AGG | + | Chr5:13605115-13605134 | None:intergenic | 25.0% |
| ! | TCCTTTAATTACATCTAGAA+TGG | + | Chr5:13605214-13605233 | None:intergenic | 25.0% |
| ! | TTAATGGAAAAAAAATCACG+TGG | - | Chr5:13605402-13605421 | MsG0580025078.01.T01:CDS | 25.0% |
| ! | TTATGAATGAATATGGCATT+GGG | - | Chr5:13604730-13604749 | MsG0580025078.01.T01:CDS | 25.0% |
| ! | TTATTTGCAATTGAATCTGA+TGG | - | Chr5:13605080-13605099 | MsG0580025078.01.T01:CDS | 25.0% |
| ! | TTGTTGTAATCTCAGTTATT+TGG | - | Chr5:13605507-13605526 | MsG0580025078.01.T01:CDS | 25.0% |
| ! | TTTATCTGATGTTTCAATGT+GGG | - | Chr5:13604707-13604726 | MsG0580025078.01.T01:CDS | 25.0% |
| !! | TTTTATCTGATGTTTCAATG+TGG | - | Chr5:13604706-13604725 | MsG0580025078.01.T01:CDS | 25.0% |
| AAATTAGACTTGGAATGTGT+GGG | + | Chr5:13604977-13604996 | None:intergenic | 30.0% | |
| AAATTCTTCACCATCAGATA+AGG | + | Chr5:13605772-13605791 | None:intergenic | 30.0% | |
| AATCTATTGCGGATCAAAAT+CGG | - | Chr5:13604277-13604296 | MsG0580025078.01.T01:intron | 30.0% | |
| AGACTCGAAAAAGAAATTTG+AGG | + | Chr5:13604474-13604493 | None:intergenic | 30.0% | |
| AGCCACAAAGATGTAATTAA+AGG | + | Chr5:13605375-13605394 | None:intergenic | 30.0% | |
| AGGTAGTAAATAGTTTCTTG+AGG | - | Chr5:13605546-13605565 | MsG0580025078.01.T01:CDS | 30.0% | |
| ATCATAAGACGAGTATTCAA+AGG | - | Chr5:13605140-13605159 | MsG0580025078.01.T01:CDS | 30.0% | |
| ATTAGCATGGGAGAATTAAA+GGG | - | Chr5:13604657-13604676 | MsG0580025078.01.T01:CDS | 30.0% | |
| CAAAGATGCAATAAAGCAAA+AGG | - | Chr5:13603676-13603695 | MsG0580025078.01.T01:intron | 30.0% | |
| CAAATGAGAAGAGACTTAAA+TGG | + | Chr5:13603790-13603809 | None:intergenic | 30.0% | |
| CACAAAGATGTAATTAAAGG+TGG | + | Chr5:13605372-13605391 | None:intergenic | 30.0% | |
| CACCTTTAATTACATCTTTG+TGG | - | Chr5:13605370-13605389 | MsG0580025078.01.T01:CDS | 30.0% | |
| CATTCTTTCATCAATCTTGT+TGG | - | Chr5:13603219-13603238 | MsG0580025078.01.T01:three_prime_UTR | 30.0% | |
| CTTCATTGGATAAGATTTGA+TGG | - | Chr5:13604522-13604541 | MsG0580025078.01.T01:CDS | 30.0% | |
| GACGGAAGATTATCAAAATA+AGG | + | Chr5:13603736-13603755 | None:intergenic | 30.0% | |
| GATATTGTGAATTCTTGCAA+TGG | - | Chr5:13604171-13604190 | MsG0580025078.01.T01:intron | 30.0% | |
| GCAGGAATGATATAACAATA+TGG | + | Chr5:13604868-13604887 | None:intergenic | 30.0% | |
| GCCATTCTAGATGTAATTAA+AGG | - | Chr5:13605210-13605229 | MsG0580025078.01.T01:CDS | 30.0% | |
| GTAAATGTGTGTGCAAAATT+TGG | - | Chr5:13603809-13603828 | MsG0580025078.01.T01:CDS | 30.0% | |
| GTTATGAATGAATATGGCAT+TGG | - | Chr5:13604729-13604748 | MsG0580025078.01.T01:CDS | 30.0% | |
| TACTATGAACCTGAGAAATA+TGG | - | Chr5:13604900-13604919 | MsG0580025078.01.T01:CDS | 30.0% | |
| TAGAAGGAATTTCAAACAGT+AGG | - | Chr5:13606023-13606042 | MsG0580025078.01.T01:intron | 30.0% | |
| TAGACTTCGTCATGTAATAT+TGG | - | Chr5:13605883-13605902 | MsG0580025078.01.T01:intron | 30.0% | |
| TATGAATGAATATGGCATTG+GGG | - | Chr5:13604731-13604750 | MsG0580025078.01.T01:CDS | 30.0% | |
| TATTAGCATGGGAGAATTAA+AGG | - | Chr5:13604656-13604675 | MsG0580025078.01.T01:CDS | 30.0% | |
| TCATTATCTATGCTTTAACG+AGG | - | Chr5:13606155-13606174 | MsG0580025078.01.T01:intron | 30.0% | |
| TCCAAGTCTAATTTCATTGA+AGG | - | Chr5:13604983-13605002 | MsG0580025078.01.T01:CDS | 30.0% | |
| TCCTTCAATGAAATTAGACT+TGG | + | Chr5:13604987-13605006 | None:intergenic | 30.0% | |
| TTAAAGGAAGACATGTTGTT+AGG | - | Chr5:13605226-13605245 | MsG0580025078.01.T01:CDS | 30.0% | |
| TTATGATTTCCAGACATATG+TGG | + | Chr5:13604612-13604631 | None:intergenic | 30.0% | |
| TTTGAAAGGTGACAATATTG+AGG | - | Chr5:13605010-13605029 | MsG0580025078.01.T01:CDS | 30.0% | |
| ! | ATGTGGGTTATGAATGAATA+TGG | - | Chr5:13604723-13604742 | MsG0580025078.01.T01:CDS | 30.0% |
| ! | ATTGATGAAGAAAAGCACAT+AGG | + | Chr5:13606242-13606261 | None:intergenic | 30.0% |
| ! | CCCTTGCTTATTACAATTTT+AGG | - | Chr5:13605851-13605870 | MsG0580025078.01.T01:intron | 30.0% |
| ! | TCATGTTTTTCATCGTCTTA+TGG | - | Chr5:13605723-13605742 | MsG0580025078.01.T01:CDS | 30.0% |
| ! | TTATCTGATGGTGAAGAATT+TGG | - | Chr5:13605771-13605790 | MsG0580025078.01.T01:CDS | 30.0% |
| !! | ATAATGGATTTCTTGGTAGT+AGG | - | Chr5:13604631-13604650 | MsG0580025078.01.T01:CDS | 30.0% |
| !! | CCTTCTTCAAAGTGTTTTAT+CGG | + | Chr5:13604840-13604859 | None:intergenic | 30.0% |
| !! | CTTTTGCTTTATTGCATCTT+TGG | + | Chr5:13603678-13603697 | None:intergenic | 30.0% |
| !! | TCATTGAAGGATGTTTTGAA+AGG | - | Chr5:13604996-13605015 | MsG0580025078.01.T01:CDS | 30.0% |
| !! | TTCGAAGTTTTTCGAATTCA+CGG | - | Chr5:13604924-13604943 | MsG0580025078.01.T01:CDS | 30.0% |
| AAACGACGAGAACAGTTATA+TGG | - | Chr5:13604101-13604120 | MsG0580025078.01.T01:intron | 35.0% | |
| AACGACGAGAACAGTTATAT+GGG | - | Chr5:13604102-13604121 | MsG0580025078.01.T01:intron | 35.0% | |
| AACGCTTTACCATCGAAATT+AGG | - | Chr5:13603242-13603261 | MsG0580025078.01.T01:three_prime_UTR | 35.0% | |
| AAGACTTCCTGAATCTATTG+CGG | - | Chr5:13604266-13604285 | MsG0580025078.01.T01:intron | 35.0% | |
| ACGCTTTACCATCGAAATTA+GGG | - | Chr5:13603243-13603262 | MsG0580025078.01.T01:three_prime_UTR | 35.0% | |
| ACTCATTACAATTCAGGCTT+AGG | + | Chr5:13606320-13606339 | None:intergenic | 35.0% | |
| ACTTCGAATCCATATTTCTC+AGG | + | Chr5:13604912-13604931 | None:intergenic | 35.0% | |
| AGCTAAAACTGCAAATTGCA+GGG | + | Chr5:13605582-13605601 | None:intergenic | 35.0% | |
| ATCTATTGCGGATCAAAATC+GGG | - | Chr5:13604278-13604297 | MsG0580025078.01.T01:intron | 35.0% | |
| ATGGAAGTTGAAGCAGAATA+TGG | + | Chr5:13603771-13603790 | None:intergenic | 35.0% | |
| CAGTTAATGACTAGGAATCT+AGG | + | Chr5:13606273-13606292 | None:intergenic | 35.0% | |
| CATTAACTGCTCCTTGAAAA+GGG | - | Chr5:13606284-13606303 | MsG0580025078.01.T01:intron | 35.0% | |
| CCTTTATACTTTCGTGTTGA+TGG | - | Chr5:13605461-13605480 | MsG0580025078.01.T01:CDS | 35.0% | |
| CGATACTTCATTCAATCCTT+CGG | - | Chr5:13604779-13604798 | MsG0580025078.01.T01:CDS | 35.0% | |
| CTCATTACAATTCAGGCTTA+GGG | + | Chr5:13606319-13606338 | None:intergenic | 35.0% | |
| GAAATTAGACTTGGAATGTG+TGG | + | Chr5:13604978-13604997 | None:intergenic | 35.0% | |
| GGTACATTGTTCTTGAAACT+CGG | + | Chr5:13603921-13603940 | None:intergenic | 35.0% | |
| GGTGTGCAAAGTTTAAATTG+CGG | - | Chr5:13605647-13605666 | MsG0580025078.01.T01:CDS | 35.0% | |
| GTGTGCAAAGTTTAAATTGC+GGG | - | Chr5:13605648-13605667 | MsG0580025078.01.T01:CDS | 35.0% | |
| GTTTAAATTGCGGGAAGAAA+AGG | - | Chr5:13605657-13605676 | MsG0580025078.01.T01:CDS | 35.0% | |
| TAGCTAAAACTGCAAATTGC+AGG | + | Chr5:13605583-13605602 | None:intergenic | 35.0% | |
| TCATTAACTGCTCCTTGAAA+AGG | - | Chr5:13606283-13606302 | MsG0580025078.01.T01:five_prime_UTR | 35.0% | |
| TCCAAGTGTGTTTATCTCAA+GGG | + | Chr5:13604421-13604440 | None:intergenic | 35.0% | |
| TGAAACTCGGCTATATTCAT+TGG | + | Chr5:13603908-13603927 | None:intergenic | 35.0% | |
| TGGAAGTTGAAGCAGAATAT+GGG | + | Chr5:13603770-13603789 | None:intergenic | 35.0% | |
| TTATCCCTAAATGATCTGAG+AGG | + | Chr5:13604018-13604037 | None:intergenic | 35.0% | |
| TTCCAAGTGTGTTTATCTCA+AGG | + | Chr5:13604422-13604441 | None:intergenic | 35.0% | |
| TTGGATCTTCTTTAGTTGCT+AGG | - | Chr5:13605526-13605545 | MsG0580025078.01.T01:CDS | 35.0% | |
| ! | AAGAAAAGCACATAGGAGAT+CGG | + | Chr5:13606235-13606254 | None:intergenic | 35.0% |
| ! | CCATCAACACGAAAGTATAA+AGG | + | Chr5:13605464-13605483 | None:intergenic | 35.0% |
| ! | CCGATAAAACACTTTGAAGA+AGG | - | Chr5:13604837-13604856 | MsG0580025078.01.T01:CDS | 35.0% |
| ! | CTTCCAATCTCAAACTTTTC+AGG | + | Chr5:13603958-13603977 | None:intergenic | 35.0% |
| ! | CTTTCAAGTCTCAAACAATC+TGG | + | Chr5:13605702-13605721 | None:intergenic | 35.0% |
| ! | GAAGAGTACAACTGATTAGA+AGG | - | Chr5:13606007-13606026 | MsG0580025078.01.T01:intron | 35.0% |
| ! | GATCCTGAAAAGTTTGAGAT+TGG | - | Chr5:13603952-13603971 | MsG0580025078.01.T01:intron | 35.0% |
| ! | TAAGATTTGATGGTCTGCAA+AGG | - | Chr5:13604532-13604551 | MsG0580025078.01.T01:CDS | 35.0% |
| ! | TGTGCTTTTCTTCATCAATC+TGG | - | Chr5:13606243-13606262 | MsG0580025078.01.T01:five_prime_UTR | 35.0% |
| ! | TTATACTTTCGTGTTGATGG+AGG | - | Chr5:13605464-13605483 | MsG0580025078.01.T01:CDS | 35.0% |
| ! | TTTTGATCCGCAATAGATTC+AGG | + | Chr5:13604276-13604295 | None:intergenic | 35.0% |
| !! | ACTAATGGGTTTCCAAAAGA+TGG | + | Chr5:13604216-13604235 | None:intergenic | 35.0% |
| !! | CTAATGGGTTTCCAAAAGAT+GGG | + | Chr5:13604215-13604234 | None:intergenic | 35.0% |
| !! | TCGAAGTTTTTCGAATTCAC+GGG | - | Chr5:13604925-13604944 | MsG0580025078.01.T01:CDS | 35.0% |
| !! | TTTGTGGCTCTGATAGTTAA+TGG | - | Chr5:13605386-13605405 | MsG0580025078.01.T01:CDS | 35.0% |
| AAAGCAGACGTACTCTTCTT+AGG | + | Chr5:13605811-13605830 | None:intergenic | 40.0% | |
| AAGTATCCCACTTGTGTGAA+TGG | - | Chr5:13604495-13604514 | MsG0580025078.01.T01:CDS | 40.0% | |
| ACCCTTGAGATAAACACACT+TGG | - | Chr5:13604417-13604436 | MsG0580025078.01.T01:intron | 40.0% | |
| ACTAATCTCACAGCACGAAA+AGG | + | Chr5:13604072-13604091 | None:intergenic | 40.0% | |
| ACTTCAACATTTCTCCAGGA+TGG | + | Chr5:13604447-13604466 | None:intergenic | 40.0% | |
| AGCAAAAGGGAAAGTTGTTG+AGG | - | Chr5:13603690-13603709 | MsG0580025078.01.T01:three_prime_UTR | 40.0% | |
| AGCTACATTCTTACCTTGAG+TGG | + | Chr5:13605046-13605065 | None:intergenic | 40.0% | |
| AGCTTCCTCTCAGATCATTT+AGG | - | Chr5:13604010-13604029 | MsG0580025078.01.T01:intron | 40.0% | |
| AGGAATTTCAAACAGTAGGC+AGG | - | Chr5:13606027-13606046 | MsG0580025078.01.T01:intron | 40.0% | |
| ATATCCTCCTCCTTATCTGA+TGG | - | Chr5:13605759-13605778 | MsG0580025078.01.T01:CDS | 40.0% | |
| ATATGGGCAATAACGTGAGA+CGG | + | Chr5:13603754-13603773 | None:intergenic | 40.0% | |
| ATCCACTTCAACATTTCTCC+AGG | + | Chr5:13604451-13604470 | None:intergenic | 40.0% | |
| ATCCTGGAGAAATGTTGAAG+TGG | - | Chr5:13604446-13604465 | MsG0580025078.01.T01:CDS | 40.0% | |
| ATGGAGGAGACGAAAATGAA+TGG | - | Chr5:13605480-13605499 | MsG0580025078.01.T01:CDS | 40.0% | |
| ATGTTAAACGTGCCAATGTG+TGG | - | Chr5:13604379-13604398 | MsG0580025078.01.T01:intron | 40.0% | |
| CAGTAGGCAGGGTTATAATT+TGG | - | Chr5:13606039-13606058 | MsG0580025078.01.T01:intron | 40.0% | |
| CTAATCTCACAGCACGAAAA+GGG | + | Chr5:13604071-13604090 | None:intergenic | 40.0% | |
| CTTCAACATTTCTCCAGGAT+GGG | + | Chr5:13604446-13604465 | None:intergenic | 40.0% | |
| GCTAAAACTGCAAATTGCAG+GGG | + | Chr5:13605581-13605600 | None:intergenic | 40.0% | |
| GCTTCCTCTCAGATCATTTA+GGG | - | Chr5:13604011-13604030 | MsG0580025078.01.T01:intron | 40.0% | |
| GGAATTACCTCGAAGAAGTT+CGG | + | Chr5:13603271-13603290 | None:intergenic | 40.0% | |
| GGAATTTCAAACAGTAGGCA+GGG | - | Chr5:13606028-13606047 | MsG0580025078.01.T01:intron | 40.0% | |
| GGTAGTAGGCATATTAGCAT+GGG | - | Chr5:13604645-13604664 | MsG0580025078.01.T01:CDS | 40.0% | |
| TAAATTGCGGGAAGAAAAGG+AGG | - | Chr5:13605660-13605679 | MsG0580025078.01.T01:CDS | 40.0% | |
| TATCTATGCTTTAACGAGGC+TGG | - | Chr5:13606159-13606178 | MsG0580025078.01.T01:intron | 40.0% | |
| TCAAGGAGCAGTTAATGACT+AGG | + | Chr5:13606281-13606300 | None:intergenic | 40.0% | |
| TGATTTCCAGACATATGTGG+AGG | + | Chr5:13604609-13604628 | None:intergenic | 40.0% | |
| TGGTAGTAGGCATATTAGCA+TGG | - | Chr5:13604644-13604663 | MsG0580025078.01.T01:CDS | 40.0% | |
| TGGTCTGCAAAGGTCAATAT+TGG | - | Chr5:13604542-13604561 | MsG0580025078.01.T01:CDS | 40.0% | |
| TGTTAAACGTGCCAATGTGT+GGG | - | Chr5:13604380-13604399 | MsG0580025078.01.T01:intron | 40.0% | |
| TTATAAACTCCCCAGTGACT+GGG | + | Chr5:13604248-13604267 | None:intergenic | 40.0% | |
| TTCAACATTTCTCCAGGATG+GGG | + | Chr5:13604445-13604464 | None:intergenic | 40.0% | |
| TTCTTCACCATCAGATAAGG+AGG | + | Chr5:13605769-13605788 | None:intergenic | 40.0% | |
| TTTCAGGATCACACTCAAGA+AGG | + | Chr5:13603942-13603961 | None:intergenic | 40.0% | |
| ! | AATATGGCATTGGGGAATCA+TGG | - | Chr5:13604739-13604758 | MsG0580025078.01.T01:CDS | 40.0% |
| ! | ACGTCTGCTTTCGTATTGAT+TGG | - | Chr5:13605820-13605839 | MsG0580025078.01.T01:CDS | 40.0% |
| ! | AGAAAAGCACATAGGAGATC+GGG | + | Chr5:13606234-13606253 | None:intergenic | 40.0% |
| ! | GGTTTCAGAAACCCTTTTCA+AGG | + | Chr5:13606298-13606317 | None:intergenic | 40.0% |
| ! | TGTTTGTCTGACCCATCTTT+TGG | - | Chr5:13604201-13604220 | MsG0580025078.01.T01:intron | 40.0% |
| !! | AGGTTCTGAATATCCACTCA+AGG | - | Chr5:13605030-13605049 | MsG0580025078.01.T01:CDS | 40.0% |
| !! | GTGCTGTGAGATTAGTTTCA+GGG | - | Chr5:13604076-13604095 | MsG0580025078.01.T01:intron | 40.0% |
| AAACTGCAAATTGCAGGGGA+TGG | + | Chr5:13605577-13605596 | None:intergenic | 45.0% | |
| AAGTGCACCATTCACACAAG+TGG | + | Chr5:13604505-13604524 | None:intergenic | 45.0% | |
| AATGAACCAACGCTGTTGAG+AGG | + | Chr5:13603203-13603222 | None:intergenic | 45.0% | |
| ACGTACTCTTCTTAGGAAGC+AGG | + | Chr5:13605804-13605823 | None:intergenic | 45.0% | |
| ACTGGGTTGCAGATCACTAA+TGG | + | Chr5:13604231-13604250 | None:intergenic | 45.0% | |
| AGTGCACCATTCACACAAGT+GGG | + | Chr5:13604504-13604523 | None:intergenic | 45.0% | |
| ATGAACCAACGCTGTTGAGA+GGG | + | Chr5:13603202-13603221 | None:intergenic | 45.0% | |
| CAAAATCGGGTAAGAAGGCT+AGG | - | Chr5:13604291-13604310 | MsG0580025078.01.T01:intron | 45.0% | |
| CACGGAGATATGGTTTAAGC+TGG | - | Chr5:13604814-13604833 | MsG0580025078.01.T01:CDS | 45.0% | |
| CAGCTTAAACCATATCTCCG+TGG | + | Chr5:13604816-13604835 | None:intergenic | 45.0% | |
| CGGATCAAAATCGGGTAAGA+AGG | - | Chr5:13604286-13604305 | MsG0580025078.01.T01:intron | 45.0% | |
| CTGAGAGGAAGCTTGAACAT+AGG | + | Chr5:13604003-13604022 | None:intergenic | 45.0% | |
| CTGGGTTGCAGATCACTAAT+GGG | + | Chr5:13604230-13604249 | None:intergenic | 45.0% | |
| CTTATAAACTCCCCAGTGAC+TGG | + | Chr5:13604249-13604268 | None:intergenic | 45.0% | |
| GTAAGAAGGCTAGGACAAAC+TGG | - | Chr5:13604300-13604319 | MsG0580025078.01.T01:intron | 45.0% | |
| GTGTGAATGGTGCACTTCAT+TGG | - | Chr5:13604508-13604527 | MsG0580025078.01.T01:CDS | 45.0% | |
| GTTCGGAACCCTAATTTCGA+TGG | + | Chr5:13603254-13603273 | None:intergenic | 45.0% | |
| TTCACCAAAAGCCTCAGCAA+CGG | + | Chr5:13605990-13606009 | None:intergenic | 45.0% | |
| TTCACCATCAGATAAGGAGG+AGG | + | Chr5:13605766-13605785 | None:intergenic | 45.0% | |
| TTGAGAGGGAATGGGGTTAA+GGG | + | Chr5:13603188-13603207 | None:intergenic | 45.0% | |
| !! | AGGCTAGGACAAACTGGTTT+TGG | - | Chr5:13604306-13604325 | MsG0580025078.01.T01:intron | 45.0% |
| !! | CGTGCTGTGAGATTAGTTTC+AGG | - | Chr5:13604075-13604094 | MsG0580025078.01.T01:intron | 45.0% |
| !! | ATATAAATTAAAACAATATT+GGG | + | Chr5:13605626-13605645 | None:intergenic | 5.0% |
| !! | TATATAAATTAAAACAATAT+TGG | + | Chr5:13605627-13605646 | None:intergenic | 5.0% |
| !!! | AATATTGTTTTAATTTATAT+AGG | - | Chr5:13605626-13605645 | MsG0580025078.01.T01:CDS | 5.0% |
| AACGCTGTTGAGAGGGAATG+GGG | + | Chr5:13603195-13603214 | None:intergenic | 50.0% | |
| AAGGTTCAATTGCCCCTGCT+AGG | - | Chr5:13603647-13603666 | MsG0580025078.01.T01:intron | 50.0% | |
| ACGCTCAAACTCCCACACAT+TGG | + | Chr5:13604394-13604413 | None:intergenic | 50.0% | |
| AGGTTCAATTGCCCCTGCTA+GGG | - | Chr5:13603648-13603667 | MsG0580025078.01.T01:intron | 50.0% | |
| AGTCGTGTTCCACGGAGATA+TGG | - | Chr5:13604804-13604823 | MsG0580025078.01.T01:CDS | 50.0% | |
| CAACGCTGTTGAGAGGGAAT+GGG | + | Chr5:13603196-13603215 | None:intergenic | 50.0% | |
| CCAGACATATGTGGAGGAGA+AGG | + | Chr5:13604603-13604622 | None:intergenic | 50.0% | |
| CCTTCTCCTCCACATATGTC+TGG | - | Chr5:13604600-13604619 | MsG0580025078.01.T01:CDS | 50.0% | |
| CTTCGGAAAGTCGTGTTCCA+CGG | - | Chr5:13604796-13604815 | MsG0580025078.01.T01:CDS | 50.0% | |
| GTTCGAATCACGAGACTGAG+TGG | + | Chr5:13603886-13603905 | None:intergenic | 50.0% | |
| GTTGAGAGGGAATGGGGTTA+AGG | + | Chr5:13603189-13603208 | None:intergenic | 50.0% | |
| TAGGGTTCCGAACTTCTTCG+AGG | - | Chr5:13603261-13603280 | MsG0580025078.01.T01:three_prime_UTR | 50.0% | |
| TGATCTGCAACCCAGTCACT+GGG | - | Chr5:13604235-13604254 | MsG0580025078.01.T01:intron | 50.0% | |
| ACACACTTGGAACCCCATCC+TGG | - | Chr5:13604430-13604449 | MsG0580025078.01.T01:intron | 55.0% | |
| AGGGAATGGGGTTAAGGGTG+AGG | + | Chr5:13603183-13603202 | None:intergenic | 55.0% | |
| ATCTTTGGCCAGCCCTAGCA+GGG | + | Chr5:13603663-13603682 | None:intergenic | 55.0% | |
| CCAACGCTGTTGAGAGGGAA+TGG | + | Chr5:13603197-13603216 | None:intergenic | 55.0% | |
| CCATTCCCTCTCAACAGCGT+TGG | - | Chr5:13603194-13603213 | MsG0580025078.01.T01:three_prime_UTR | 55.0% | |
| CGTGGAACACGACTTTCCGA+AGG | + | Chr5:13604798-13604817 | None:intergenic | 55.0% | |
| GATCTGCAACCCAGTCACTG+GGG | - | Chr5:13604236-13604255 | MsG0580025078.01.T01:intron | 55.0% | |
| GGAATGGGGTTAAGGGTGAG+GGG | + | Chr5:13603181-13603200 | None:intergenic | 55.0% | |
| GGGAATGGGGTTAAGGGTGA+GGG | + | Chr5:13603182-13603201 | None:intergenic | 55.0% | |
| GTGATCTGCAACCCAGTCAC+TGG | - | Chr5:13604234-13604253 | MsG0580025078.01.T01:intron | 55.0% | |
| ! | TCGTCCGTTGCTGAGGCTTT+TGG | - | Chr5:13605983-13606002 | MsG0580025078.01.T01:intron | 55.0% |
| ACCTTCGTCGTCCGTTGCTG+AGG | - | Chr5:13605976-13605995 | MsG0580025078.01.T01:intron | 60.0% | |
| CATCTTTGGCCAGCCCTAGC+AGG | + | Chr5:13603664-13603683 | None:intergenic | 60.0% | |
| TCAATTGCCCCTGCTAGGGC+TGG | - | Chr5:13603652-13603671 | MsG0580025078.01.T01:intron | 60.0% | |
| TCTTTGGCCAGCCCTAGCAG+GGG | + | Chr5:13603662-13603681 | None:intergenic | 60.0% | |
| !! | CACAGCACGAAAAGGGCGCT+TGG | + | Chr5:13604064-13604083 | None:intergenic | 60.0% |
| GCCTCAGCAACGGACGACGA+AGG | + | Chr5:13605980-13605999 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr5 | gene | 13603099 | 13606396 | 13603099 | ID=MsG0580025078.01;Name=MsG0580025078.01 |
| Chr5 | mRNA | 13603099 | 13606396 | 13603099 | ID=MsG0580025078.01.T01;Parent=MsG0580025078.01;Name=MsG0580025078.01.T01;_AED=0.31;_eAED=0.31;_QI=166|1|1|1|0|0|5|582|493 |
| Chr5 | exon | 13603099 | 13603574 | 13603099 | ID=MsG0580025078.01.T01:exon:5566;Parent=MsG0580025078.01.T01 |
| Chr5 | exon | 13603678 | 13603847 | 13603678 | ID=MsG0580025078.01.T01:exon:5565;Parent=MsG0580025078.01.T01 |
| Chr5 | exon | 13606213 | 13606302 | 13606213 | ID=MsG0580025078.01.T01:exon:5563;Parent=MsG0580025078.01.T01 |
| Chr5 | exon | 13606323 | 13606396 | 13606323 | ID=MsG0580025078.01.T01:exon:5562;Parent=MsG0580025078.01.T01 |
| Chr5 | five_prime_UTR | 13606323 | 13606396 | 13606323 | ID=MsG0580025078.01.T01:five_prime_utr;Parent=MsG0580025078.01.T01 |
| Chr5 | five_prime_UTR | 13606213 | 13606302 | 13606213 | ID=MsG0580025078.01.T01:five_prime_utr;Parent=MsG0580025078.01.T01 |
| Chr5 | five_prime_UTR | 13605862 | 13605863 | 13605862 | ID=MsG0580025078.01.T01:five_prime_utr;Parent=MsG0580025078.01.T01 |
| Chr5 | CDS | 13604444 | 13605861 | 13604444 | ID=MsG0580025078.01.T01:cds;Parent=MsG0580025078.01.T01 |
| Chr5 | CDS | 13603784 | 13603847 | 13603784 | ID=MsG0580025078.01.T01:cds;Parent=MsG0580025078.01.T01 |
| Chr5 | three_prime_UTR | 13603678 | 13603783 | 13603678 | ID=MsG0580025078.01.T01:three_prime_utr;Parent=MsG0580025078.01.T01 |
| Chr5 | three_prime_UTR | 13603099 | 13603574 | 13603099 | ID=MsG0580025078.01.T01:three_prime_utr;Parent=MsG0580025078.01.T01 |
| Chr5 | mRNA | 13603281 | 13606360 | 13603281 | ID=MsG0580025078.01.T02;Parent=MsG0580025078.01;Name=MsG0580025078.01.T02;_AED=0.31;_eAED=0.31;_QI=150|1|1|1|0|0|3|503|493 |
| Chr5 | exon | 13603281 | 13603847 | 13603281 | ID=MsG0580025078.01.T02:exon:5568;Parent=MsG0580025078.01.T02 |
| Chr5 | exon | 13606213 | 13606360 | 13606213 | ID=MsG0580025078.01.T02:exon:5567;Parent=MsG0580025078.01.T02 |
| Chr5 | five_prime_UTR | 13606213 | 13606360 | 13606213 | ID=MsG0580025078.01.T02:five_prime_utr;Parent=MsG0580025078.01.T02 |
| Chr5 | five_prime_UTR | 13605862 | 13605863 | 13605862 | ID=MsG0580025078.01.T02:five_prime_utr;Parent=MsG0580025078.01.T02 |
| Chr5 | CDS | 13604444 | 13605861 | 13604444 | ID=MsG0580025078.01.T02:cds;Parent=MsG0580025078.01.T02 |
| Chr5 | CDS | 13603784 | 13603847 | 13603784 | ID=MsG0580025078.01.T02:cds;Parent=MsG0580025078.01.T02 |
| Chr5 | three_prime_UTR | 13603281 | 13603783 | 13603281 | ID=MsG0580025078.01.T02:three_prime_utr;Parent=MsG0580025078.01.T02 |
| Gene Sequence |
| Protein sequence |
