Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0001510 | Msa0008600 | -0.800779 | 1.228018e-48 | -8.615850e-47 |
| Msa0004180 | Msa0008600 | -0.816745 | 4.720406e-52 | -8.615850e-47 |
| Msa0008600 | Msa0021240 | -0.818115 | 2.319767e-52 | -8.615850e-47 |
| Msa0008600 | Msa0027020 | -0.818960 | 1.492113e-52 | -8.615850e-47 |
| Msa0008600 | Msa0032700 | -0.807946 | 3.942371e-50 | -8.615850e-47 |
| Msa0008600 | Msa0033970 | 0.804378 | 2.223663e-49 | -8.615850e-47 |
| Msa0008600 | Msa0037040 | -0.809812 | 1.572892e-50 | -8.615850e-47 |
| Msa0008600 | Msa0037780 | -0.822656 | 2.108236e-53 | -8.615850e-47 |
| Msa0008600 | Msa0042950 | -0.815389 | 9.479223e-52 | -8.615850e-47 |
| Msa0008600 | Msa0046020 | -0.817297 | 3.546975e-52 | -8.615850e-47 |
| Msa0008600 | Msa0056910 | 0.884435 | 1.922782e-71 | -8.615850e-47 |
| Msa0008600 | Msa0057000 | 0.983386 | 1.336903e-157 | -8.615850e-47 |
| Msa0008600 | Msa0064490 | -0.814129 | 1.802446e-51 | -8.615850e-47 |
| Msa0008600 | Msa0069150 | -0.825012 | 5.909747e-54 | -8.615850e-47 |
| Msa0008600 | Msa0069230 | -0.802005 | 6.889305e-49 | -8.615850e-47 |
| Msa0008600 | Msa0072440 | 0.803680 | 3.105836e-49 | -8.615850e-47 |
| Msa0008600 | Msa0075080 | -0.808065 | 3.719588e-50 | -8.615850e-47 |
| Msa0008600 | Msa0078990 | 0.809538 | 1.801298e-50 | -8.615850e-47 |
| Msa0008600 | Msa0079100 | -0.813389 | 2.624084e-51 | -8.615850e-47 |
| Msa0008600 | Msa0081440 | -0.807729 | 4.383488e-50 | -8.615850e-47 |
| Msa0008600 | Msa0085470 | -0.820108 | 8.162018e-53 | -8.615850e-47 |
| Msa0008600 | Msa0089700 | -0.823773 | 1.156347e-53 | -8.615850e-47 |
| Msa0008600 | Msa0097470 | -0.824832 | 6.517433e-54 | -8.615850e-47 |
| Msa0008600 | Msa0112880 | -0.812290 | 4.566068e-51 | -8.615850e-47 |
| Msa0008600 | Msa0118700 | -0.819353 | 1.214369e-52 | -8.615850e-47 |
| Msa0008600 | Msa0122930 | -0.809461 | 1.870405e-50 | -8.615850e-47 |
| Msa0008600 | Msa0123960 | -0.829867 | 4.048117e-55 | -8.615850e-47 |
| Msa0008600 | Msa0127350 | -0.830318 | 3.142179e-55 | -8.615850e-47 |
| Msa0008600 | Msa0136090 | 0.801562 | 8.492495e-49 | -8.615850e-47 |
| Msa0008600 | Msa0138340 | -0.805936 | 1.049390e-49 | -8.615850e-47 |
| Msa0008600 | Msa0138680 | -0.807197 | 5.686594e-50 | -8.615850e-47 |
| Msa0008600 | Msa0140870 | -0.809921 | 1.489771e-50 | -8.615850e-47 |
| Msa0008600 | Msa0142340 | -0.824407 | 8.210245e-54 | -8.615850e-47 |
| Msa0008600 | Msa0145050 | 0.801588 | 8.390236e-49 | -8.615850e-47 |
| Msa0008600 | Msa0145590 | -0.809081 | 2.256860e-50 | -8.615850e-47 |
| Msa0008600 | Msa0147960 | -0.806658 | 7.393711e-50 | -8.615850e-47 |
| Msa0008600 | Msa0164530 | -0.807767 | 4.303184e-50 | -8.615850e-47 |
| Msa0008600 | Msa0167160 | -0.813017 | 3.166205e-51 | -8.615850e-47 |
| Msa0008600 | Msa0167570 | -0.832552 | 8.856865e-56 | -8.615850e-47 |
| Msa0008600 | Msa0188670 | -0.803628 | 3.183424e-49 | -8.615850e-47 |
| Msa0008600 | Msa0195810 | -0.822666 | 2.096887e-53 | -8.615850e-47 |
| Msa0008600 | Msa0211590 | -0.812445 | 4.223821e-51 | -8.615850e-47 |
| Msa0008600 | Msa0224180 | -0.817871 | 2.633094e-52 | -8.615850e-47 |
| Msa0008600 | Msa0225080 | -0.816296 | 5.949800e-52 | -8.615850e-47 |
| Msa0008600 | Msa0237650 | -0.811695 | 6.157029e-51 | -8.615850e-47 |
| Msa0008600 | Msa0255770 | -0.826224 | 3.050622e-54 | -8.615850e-47 |
| Msa0008600 | Msa0259450 | -0.808091 | 3.672208e-50 | -8.615850e-47 |
| Msa0008600 | Msa0259570 | -0.810213 | 1.288743e-50 | -8.615850e-47 |
| Msa0008600 | Msa0266330 | -0.803895 | 2.801888e-49 | -8.615850e-47 |
| Msa0008600 | Msa0270230 | -0.800978 | 1.118306e-48 | -8.615850e-47 |
| Msa0008600 | Msa0270730 | -0.805305 | 1.423573e-49 | -8.615850e-47 |
| Msa0008600 | Msa0271970 | -0.811764 | 5.947013e-51 | -8.615850e-47 |
| Msa0008600 | Msa0275250 | -0.821910 | 3.139966e-53 | -8.615850e-47 |
| Msa0008600 | Msa0298820 | -0.808960 | 2.395485e-50 | -8.615850e-47 |
| Msa0008600 | Msa0305630 | -0.806097 | 9.705572e-50 | -8.615850e-47 |
| Msa0008600 | Msa0307820 | -0.818551 | 1.848200e-52 | -8.615850e-47 |
| Msa0008600 | Msa0315720 | -0.825618 | 4.248448e-54 | -8.615850e-47 |
| Msa0008600 | Msa0333350 | -0.800798 | 1.217160e-48 | -8.615850e-47 |
| Msa0008600 | Msa0341950 | -0.802850 | 4.613519e-49 | -8.615850e-47 |
| Msa0008600 | Msa0343230 | -0.809704 | 1.658523e-50 | -8.615850e-47 |
| Msa0008600 | Msa0358750 | -0.800467 | 1.422026e-48 | -8.615850e-47 |
| Msa0008600 | Msa0367380 | -0.828760 | 7.516656e-55 | -8.615850e-47 |
| Msa0008600 | Msa0371010 | -0.843238 | 1.584812e-58 | -8.615850e-47 |
| Msa0008600 | Msa0372570 | -0.835180 | 1.949717e-56 | -8.615850e-47 |
| Msa0008600 | Msa0377990 | -0.808049 | 3.748333e-50 | -8.615850e-47 |
| Msa0008600 | Msa0380270 | -0.823372 | 1.434864e-53 | -8.615850e-47 |
| Msa0008600 | Msa0380470 | -0.815372 | 9.561438e-52 | -8.615850e-47 |
| Msa0008600 | Msa0382020 | -0.803451 | 3.463694e-49 | -8.615850e-47 |
| Msa0008600 | Msa0382050 | -0.853408 | 2.438069e-61 | -8.615850e-47 |
| Msa0008600 | Msa0383110 | -0.811409 | 7.104182e-51 | -8.615850e-47 |
| Msa0008600 | Msa0384140 | -0.827605 | 1.426813e-54 | -8.615850e-47 |
| Msa0008600 | Msa0386230 | -0.805582 | 1.245320e-49 | -8.615850e-47 |
| Msa0008600 | Msa0390760 | -0.817313 | 3.517686e-52 | -8.615850e-47 |
| Msa0008600 | Msa0392120 | -0.814054 | 1.873010e-51 | -8.615850e-47 |
| Msa0008600 | Msa0397420 | -0.824845 | 6.473000e-54 | -8.615850e-47 |
| Msa0008600 | Msa0405200 | 0.810494 | 1.120862e-50 | -8.615850e-47 |
| Msa0008600 | Msa0415060 | -0.804155 | 2.474539e-49 | -8.615850e-47 |
| Msa0008600 | Msa0415860 | -0.828126 | 1.068803e-54 | -8.615850e-47 |
| Msa0008600 | Msa0419150 | -0.840953 | 6.374470e-58 | -8.615850e-47 |
| Msa0008600 | Msa0420300 | -0.821720 | 3.475353e-53 | -8.615850e-47 |
| Msa0008600 | Msa0422230 | -0.809201 | 2.127489e-50 | -8.615850e-47 |
| Msa0008600 | Msa0427600 | -0.808379 | 3.188667e-50 | -8.615850e-47 |
| Msa0008600 | Msa0428300 | -0.803269 | 3.778290e-49 | -8.615850e-47 |
| Msa0008600 | Msa0428720 | -0.830758 | 2.451461e-55 | -8.615850e-47 |
| Msa0008600 | Msa0429490 | -0.802229 | 6.195291e-49 | -8.615850e-47 |
| Msa0008600 | Msa0431270 | -0.812882 | 3.389045e-51 | -8.615850e-47 |
| Msa0008600 | Msa0431550 | -0.841661 | 4.151442e-58 | -8.615850e-47 |
| Msa0008600 | Msa0433890 | -0.827527 | 1.489743e-54 | -8.615850e-47 |
| Msa0008600 | Msa0434830 | -0.842668 | 2.246447e-58 | -8.615850e-47 |
| Msa0008600 | Msa0436660 | -0.820109 | 8.157523e-53 | -8.615850e-47 |
| Msa0008600 | Msa0437820 | -0.821339 | 4.254711e-53 | -8.615850e-47 |
| Msa0008600 | Msa0444770 | -0.837144 | 6.182554e-57 | -8.615850e-47 |
| Msa0008600 | Msa0446110 | -0.802758 | 4.820101e-49 | -8.615850e-47 |
| Msa0008600 | Msa0449500 | 0.811022 | 8.617655e-51 | -8.615850e-47 |
| Msa0008600 | Msa0460170 | -0.822851 | 1.898770e-53 | -8.615850e-47 |
| Msa0008600 | Msa0464980 | -0.838697 | 2.465728e-57 | -8.615850e-47 |
| Msa0008600 | Msa0470080 | -0.803097 | 4.102090e-49 | -8.615850e-47 |
| Msa0008600 | Msa0474290 | -0.827374 | 1.620422e-54 | -8.615850e-47 |
| Msa0008600 | Msa0474660 | -0.805481 | 1.307431e-49 | -8.615850e-47 |
| Msa0008600 | Msa0476560 | -0.844509 | 7.236883e-59 | -8.615850e-47 |
| Msa0008600 | Msa0492330 | -0.853997 | 1.650085e-61 | -8.615850e-47 |
| Msa0008600 | Msa0497680 | 0.824424 | 8.132197e-54 | -8.615850e-47 |
| Msa0008600 | Msa0500580 | -0.821615 | 3.675216e-53 | -8.615850e-47 |
| Msa0008600 | Msa0503220 | 0.810788 | 9.685276e-51 | -8.615850e-47 |
| Msa0008600 | Msa0506700 | -0.810392 | 1.179182e-50 | -8.615850e-47 |
| Msa0008600 | Msa0512950 | -0.833711 | 4.557873e-56 | -8.615850e-47 |
| Msa0008600 | Msa0514630 | -0.803898 | 2.798513e-49 | -8.615850e-47 |
| Msa0008600 | Msa0518150 | -0.818427 | 1.970999e-52 | -8.615850e-47 |
| Msa0008600 | Msa0518720 | -0.816112 | 6.541900e-52 | -8.615850e-47 |
| Msa0008600 | Msa0519070 | -0.808683 | 2.745695e-50 | -8.615850e-47 |
| Msa0008600 | Msa0520550 | -0.830587 | 2.699657e-55 | -8.615850e-47 |
| Msa0008600 | Msa0522820 | -0.800654 | 1.302111e-48 | -8.615850e-47 |
| Msa0008600 | Msa0524470 | -0.838659 | 2.521789e-57 | -8.615850e-47 |
| Msa0008600 | Msa0524570 | -0.810177 | 1.312325e-50 | -8.615850e-47 |
| Msa0008600 | Msa0526990 | 0.800310 | 1.530171e-48 | -8.615850e-47 |
| Msa0008600 | Msa0527210 | -0.810023 | 1.416291e-50 | -8.615850e-47 |
| Msa0008600 | Msa0528830 | -0.800370 | 1.488206e-48 | -8.615850e-47 |
| Msa0008600 | Msa0531270 | -0.835404 | 1.711406e-56 | -8.615850e-47 |
| Msa0008600 | Msa0536970 | -0.824069 | 9.855425e-54 | -8.615850e-47 |
| Msa0008600 | Msa0538020 | -0.816530 | 5.273115e-52 | -8.615850e-47 |
| Msa0008600 | Msa0548420 | 0.837632 | 4.634975e-57 | -8.615850e-47 |
| Msa0008600 | Msa0549700 | -0.800387 | 1.475906e-48 | -8.615850e-47 |
| Msa0008600 | Msa0550770 | -0.802959 | 4.379167e-49 | -8.615850e-47 |
| Msa0008600 | Msa0550800 | -0.808648 | 2.793749e-50 | -8.615850e-47 |
| Msa0008600 | Msa0557440 | -0.814481 | 1.507337e-51 | -8.615850e-47 |
| Msa0008600 | Msa0560380 | -0.802002 | 6.897524e-49 | -8.615850e-47 |
| Msa0008600 | Msa0565370 | -0.809525 | 1.812302e-50 | -8.615850e-47 |
| Msa0008600 | Msa0565430 | -0.813957 | 1.967579e-51 | -8.615850e-47 |
| Msa0008600 | Msa0567190 | -0.802011 | 6.869452e-49 | -8.615850e-47 |
| Msa0008600 | Msa0570600 | 0.815851 | 7.478433e-52 | -8.615850e-47 |
| Msa0008600 | Msa0576480 | -0.836215 | 1.066092e-56 | -8.615850e-47 |
| Msa0008600 | Msa0580890 | -0.818868 | 1.566014e-52 | -8.615850e-47 |
| Msa0008600 | Msa0581350 | 0.821794 | 3.341164e-53 | -8.615850e-47 |
| Msa0008600 | Msa0583270 | -0.804243 | 2.372092e-49 | -8.615850e-47 |
| Msa0008600 | Msa0588110 | -0.803166 | 3.968929e-49 | -8.615850e-47 |
| Msa0008600 | Msa0597370 | -0.812115 | 4.985894e-51 | -8.615850e-47 |
| Msa0008600 | Msa0603310 | 0.840593 | 7.921447e-58 | -8.615850e-47 |
| Msa0008600 | Msa0608720 | -0.805551 | 1.263823e-49 | -8.615850e-47 |
| Msa0008600 | Msa0610300 | -0.817156 | 3.815834e-52 | -8.615850e-47 |
| Msa0008600 | Msa0615780 | 0.817360 | 3.433076e-52 | -8.615850e-47 |
| Msa0008600 | Msa0619450 | -0.818077 | 2.365862e-52 | -8.615850e-47 |
| Msa0008600 | Msa0619530 | -0.803212 | 3.881761e-49 | -8.615850e-47 |
| Msa0008600 | Msa0619960 | -0.805631 | 1.216268e-49 | -8.615850e-47 |
| Msa0008600 | Msa0620050 | -0.806968 | 6.356781e-50 | -8.615850e-47 |
| Msa0008600 | Msa0628440 | -0.843375 | 1.456628e-58 | -8.615850e-47 |
| Msa0008600 | Msa0634900 | -0.817820 | 2.704222e-52 | -8.615850e-47 |
| Msa0008600 | Msa0644220 | -0.814097 | 1.832696e-51 | -8.615850e-47 |
| Msa0008600 | Msa0644340 | 0.845045 | 5.186872e-59 | -8.615850e-47 |
| Msa0008600 | Msa0651000 | -0.829756 | 4.307727e-55 | -8.615850e-47 |
| Msa0008600 | Msa0655200 | 0.805859 | 1.089153e-49 | -8.615850e-47 |
| Msa0008600 | Msa0659580 | -0.815709 | 8.045327e-52 | -8.615850e-47 |
| Msa0008600 | Msa0673620 | -0.823750 | 1.170576e-53 | -8.615850e-47 |
| Msa0008600 | Msa0676570 | -0.807546 | 4.795935e-50 | -8.615850e-47 |
| Msa0008600 | Msa0684030 | -0.833503 | 5.136396e-56 | -8.615850e-47 |
| Msa0008600 | Msa0685530 | -0.813608 | 2.348468e-51 | -8.615850e-47 |
| Msa0008600 | Msa0692480 | -0.814218 | 1.723436e-51 | -8.615850e-47 |
| Msa0008600 | Msa0693050 | -0.870202 | 1.743878e-66 | -8.615850e-47 |
| Msa0008600 | Msa0695140 | 0.803517 | 3.356478e-49 | -8.615850e-47 |
| Msa0008600 | Msa0695250 | -0.823357 | 1.446581e-53 | -8.615850e-47 |
| Msa0008600 | Msa0695470 | -0.802801 | 4.722555e-49 | -8.615850e-47 |
| Msa0008600 | Msa0704790 | -0.808296 | 3.321474e-50 | -8.615850e-47 |
| Msa0008600 | Msa0707860 | -0.832664 | 8.306246e-56 | -8.615850e-47 |
| Msa0008600 | Msa0713570 | -0.819246 | 1.284523e-52 | -8.615850e-47 |
| Msa0008600 | Msa0729130 | -0.804947 | 1.691176e-49 | -8.615850e-47 |
| Msa0008600 | Msa0750200 | -0.811744 | 6.007364e-51 | -8.615850e-47 |
| Msa0008600 | Msa0751490 | -0.805123 | 1.553947e-49 | -8.615850e-47 |
| Msa0008600 | Msa0754880 | -0.822413 | 2.401209e-53 | -8.615850e-47 |
| Msa0008600 | Msa0755550 | -0.818939 | 1.508931e-52 | -8.615850e-47 |
| Msa0008600 | Msa0770050 | -0.805374 | 1.377028e-49 | -8.615850e-47 |
| Msa0008600 | Msa0790380 | -0.813241 | 2.827142e-51 | -8.615850e-47 |
| Msa0008600 | Msa0793130 | -0.818931 | 1.514911e-52 | -8.615850e-47 |
| Msa0008600 | Msa0793530 | -0.814369 | 1.595327e-51 | -8.615850e-47 |
| Msa0008600 | Msa0794900 | -0.823854 | 1.107126e-53 | -8.615850e-47 |
| Msa0008600 | Msa0796840 | -0.803245 | 3.821641e-49 | -8.615850e-47 |
| Msa0008600 | Msa0797180 | -0.802864 | 4.583217e-49 | -8.615850e-47 |
| Msa0008600 | Msa0800150 | 0.808837 | 2.545105e-50 | -8.615850e-47 |
| Msa0008600 | Msa0801920 | -0.804529 | 2.068046e-49 | -8.615850e-47 |
| Msa0008600 | Msa0820130 | -0.805085 | 1.582493e-49 | -8.615850e-47 |
| Msa0008600 | Msa0833980 | -0.837742 | 4.343809e-57 | -8.615850e-47 |
| Msa0008600 | Msa0835050 | -0.817561 | 3.094366e-52 | -8.615850e-47 |
| Msa0008600 | Msa0838120 | -0.803786 | 2.952663e-49 | -8.615850e-47 |
| Msa0008600 | Msa0866320 | -0.817607 | 3.021474e-52 | -8.615850e-47 |
| Msa0008600 | Msa0868510 | -0.808066 | 3.717842e-50 | -8.615850e-47 |
| Msa0008600 | Msa0868520 | -0.804787 | 1.826706e-49 | -8.615850e-47 |
| Msa0008600 | Msa0879820 | -0.816319 | 5.880731e-52 | -8.615850e-47 |
| Msa0008600 | Msa0881880 | -0.831823 | 1.341583e-55 | -8.615850e-47 |
| Msa0008600 | Msa0888460 | -0.823627 | 1.251134e-53 | -8.615850e-47 |
| Msa0008600 | Msa0892820 | -0.829267 | 5.662909e-55 | -8.615850e-47 |
| Msa0008600 | Msa0933320 | -0.820857 | 5.495526e-53 | -8.615850e-47 |
| Msa0008600 | Msa0935840 | -0.803390 | 3.566573e-49 | -8.615850e-47 |
| Msa0008600 | Msa0941420 | -0.808251 | 3.395077e-50 | -8.615850e-47 |
| Msa0008600 | Msa0945160 | -0.823345 | 1.456418e-53 | -8.615850e-47 |
| Msa0008600 | Msa0968060 | -0.811810 | 5.810811e-51 | -8.615850e-47 |
| Msa0008600 | Msa0971100 | -0.811983 | 5.328110e-51 | -8.615850e-47 |
| Msa0008600 | Msa0978540 | -0.805360 | 1.386014e-49 | -8.615850e-47 |
| Msa0008600 | Msa0978550 | -0.810157 | 1.325518e-50 | -8.615850e-47 |
| Msa0008600 | Msa0978560 | -0.810358 | 1.199280e-50 | -8.615850e-47 |
| Msa0008600 | Msa1001930 | -0.837005 | 6.707794e-57 | -8.615850e-47 |
| Msa0008600 | Msa1001940 | -0.823493 | 1.344442e-53 | -8.615850e-47 |
| Msa0008600 | Msa1002550 | -0.821273 | 4.408284e-53 | -8.615850e-47 |
| Msa0008600 | Msa1015220 | -0.819504 | 1.121731e-52 | -8.615850e-47 |
| Msa0008600 | Msa1028150 | 0.829300 | 5.560209e-55 | -8.615850e-47 |
| Msa0008600 | Msa1031190 | -0.808523 | 2.970413e-50 | -8.615850e-47 |
| Msa0008600 | Msa1033250 | -0.808984 | 2.367421e-50 | -8.615850e-47 |
| Msa0008600 | Msa1041570 | -0.812636 | 3.836447e-51 | -8.615850e-47 |
| Msa0008600 | Msa1047300 | 0.815003 | 1.154830e-51 | -8.615850e-47 |
| Msa0008600 | Msa1047340 | 0.815147 | 1.072988e-51 | -8.615850e-47 |
| Msa0008600 | Msa1062070 | 0.807028 | 6.173281e-50 | -8.615850e-47 |
| Msa0008600 | Msa1066770 | 0.832322 | 1.010010e-55 | -8.615850e-47 |
| Msa0008600 | Msa1067000 | 0.807965 | 3.906049e-50 | -8.615850e-47 |
| Msa0008600 | Msa1070370 | -0.807188 | 5.711101e-50 | -8.615850e-47 |
| Msa0008600 | Msa1072850 | -0.806776 | 6.980204e-50 | -8.615850e-47 |
| Msa0008600 | Msa1076120 | -0.820759 | 5.788984e-53 | -8.615850e-47 |
| Msa0008600 | Msa1080610 | -0.845123 | 4.940921e-59 | -8.615850e-47 |
| Msa0008600 | Msa1080680 | -0.845337 | 4.324141e-59 | -8.615850e-47 |
| Msa0008600 | Msa1089880 | -0.807736 | 4.370002e-50 | -8.615850e-47 |
| Msa0008600 | Msa1092770 | -0.801889 | 7.277568e-49 | -8.615850e-47 |
| Msa0008600 | Msa1095880 | -0.811944 | 5.433410e-51 | -8.615850e-47 |
| Msa0008600 | Msa1112190 | 0.834147 | 3.545715e-56 | -8.615850e-47 |
| Msa0008600 | Msa1113460 | -0.804776 | 1.836274e-49 | -8.615850e-47 |
| Msa0008600 | Msa1119420 | -0.806557 | 7.764849e-50 | -8.615850e-47 |
| Msa0008600 | Msa1126320 | -0.845053 | 5.162550e-59 | -8.615850e-47 |
| Msa0008600 | Msa1128200 | -0.808233 | 3.424583e-50 | -8.615850e-47 |
| Msa0008600 | Msa1129510 | -0.814045 | 1.881874e-51 | -8.615850e-47 |
| Msa0008600 | Msa1130150 | -0.819247 | 1.283675e-52 | -8.615850e-47 |
| Msa0008600 | Msa1131300 | -0.811906 | 5.537473e-51 | -8.615850e-47 |
| Msa0008600 | Msa1132250 | -0.818367 | 2.033628e-52 | -8.615850e-47 |
| Msa0008600 | Msa1133690 | 0.813456 | 2.536581e-51 | -8.615850e-47 |
| Msa0008600 | Msa1143060 | -0.810106 | 1.359076e-50 | -8.615850e-47 |
| Msa0008600 | Msa1146010 | 0.853847 | 1.822579e-61 | -8.615850e-47 |
| Msa0008600 | Msa1150750 | 0.810549 | 1.090855e-50 | -8.615850e-47 |
| Msa0008600 | Msa1156100 | -0.802126 | 6.503134e-49 | -8.615850e-47 |
| Msa0008600 | Msa1158180 | -0.808025 | 3.792025e-50 | -8.615850e-47 |
| Msa0008600 | Msa1161060 | -0.818426 | 1.972523e-52 | -8.615850e-47 |
| Msa0008600 | Msa1163130 | -0.800809 | 1.210693e-48 | -8.615850e-47 |
| Msa0008600 | Msa1163230 | -0.813480 | 2.506360e-51 | -8.615850e-47 |
| Msa0008600 | Msa1164720 | -0.807092 | 5.983976e-50 | -8.615850e-47 |
| Msa0008600 | Msa1166470 | -0.809819 | 1.567306e-50 | -8.615850e-47 |
| Msa0008600 | Msa1167150 | -0.843216 | 1.605785e-58 | -8.615850e-47 |
| Msa0008600 | Msa1199700 | -0.808950 | 2.407410e-50 | -8.615850e-47 |
| Msa0008600 | Msa1200060 | -0.822959 | 1.791565e-53 | -8.615850e-47 |
| Msa0008600 | Msa1203320 | -0.806402 | 8.371668e-50 | -8.615850e-47 |
| Msa0008600 | Msa1204870 | -0.817806 | 2.723768e-52 | -8.615850e-47 |
| Msa0008600 | Msa1204900 | -0.811874 | 5.629161e-51 | -8.615850e-47 |
| Msa0008600 | Msa1207660 | -0.809641 | 1.711029e-50 | -8.615850e-47 |
| Msa0008600 | Msa1207770 | -0.817116 | 3.896283e-52 | -8.615850e-47 |
| Msa0008600 | Msa1212150 | -0.800645 | 1.307514e-48 | -8.615850e-47 |
| Msa0008600 | Msa1221270 | 0.832002 | 1.212032e-55 | -8.615850e-47 |
| Msa0008600 | Msa1225280 | -0.805579 | 1.246712e-49 | -8.615850e-47 |
| Msa0008600 | Msa1228260 | -0.809112 | 2.222080e-50 | -8.615850e-47 |
| Msa0008600 | Msa1244380 | -0.800113 | 1.678611e-48 | -8.615850e-47 |
| Msa0008600 | Msa1247200 | -0.836788 | 7.618761e-57 | -8.615850e-47 |
| Msa0008600 | Msa1252210 | -0.818000 | 2.462397e-52 | -8.615850e-47 |
| Msa0008600 | Msa1255480 | -0.816799 | 4.591222e-52 | -8.615850e-47 |
| Msa0008600 | Msa1256490 | -0.813249 | 2.816361e-51 | -8.615850e-47 |
| Msa0008600 | Msa1257860 | -0.825468 | 4.610457e-54 | -8.615850e-47 |
| Msa0008600 | Msa1265300 | 0.814534 | 1.466851e-51 | -8.615850e-47 |
| Msa0008600 | Msa1266750 | -0.819818 | 9.513245e-53 | -8.615850e-47 |
| Msa0008600 | Msa1267560 | -0.808214 | 3.456479e-50 | -8.615850e-47 |
| Msa0008600 | Msa1271220 | -0.811507 | 6.763523e-51 | -8.615850e-47 |
| Msa0008600 | Msa1288380 | -0.804330 | 2.275582e-49 | -8.615850e-47 |
| Msa0008600 | Msa1291070 | -0.806731 | 7.135650e-50 | -8.615850e-47 |
| Msa0008600 | Msa1295200 | 0.803462 | 3.446457e-49 | -8.615850e-47 |
| Msa0008600 | Msa1296810 | -0.812108 | 5.004851e-51 | -8.615850e-47 |
| Msa0008600 | Msa1297490 | -0.818109 | 2.327388e-52 | -8.615850e-47 |
| Msa0008600 | Msa1297550 | -0.808811 | 2.577447e-50 | -8.615850e-47 |
| Msa0008600 | Msa1298170 | -0.811336 | 7.368430e-51 | -8.615850e-47 |
| Msa0008600 | Msa1301610 | -0.802361 | 5.819880e-49 | -8.615850e-47 |
| Msa0008600 | Msa1303690 | -0.824134 | 9.515582e-54 | -8.615850e-47 |
| Msa0008600 | Msa1306220 | 0.984635 | 3.891148e-161 | -8.615850e-47 |
| Msa0008600 | Msa1308430 | -0.801022 | 1.095540e-48 | -8.615850e-47 |
| Msa0008600 | Msa1325260 | -0.807792 | 4.250353e-50 | -8.615850e-47 |
| Msa0008600 | Msa1325560 | -0.838572 | 2.655557e-57 | -8.615850e-47 |
| Msa0008600 | Msa1329080 | -0.818733 | 1.679999e-52 | -8.615850e-47 |
| Msa0008600 | Msa1331530 | -0.830781 | 2.419898e-55 | -8.615850e-47 |
| Msa0008600 | Msa1341710 | -0.819232 | 1.294276e-52 | -8.615850e-47 |
| Msa0008600 | Msa1342110 | -0.809354 | 1.972046e-50 | -8.615850e-47 |
| Msa0008600 | Msa1348180 | -0.815588 | 8.560146e-52 | -8.615850e-47 |
| Msa0008600 | Msa1350130 | -0.843299 | 1.525864e-58 | -8.615850e-47 |
| Msa0008600 | Msa1350550 | -0.810878 | 9.257329e-51 | -8.615850e-47 |
| Msa0008600 | Msa1350590 | -0.817592 | 3.044203e-52 | -8.615850e-47 |
| Msa0008600 | Msa1357090 | -0.818488 | 1.909975e-52 | -8.615850e-47 |
| Msa0008600 | Msa1357710 | -0.809851 | 1.542244e-50 | -8.615850e-47 |
| Msa0008600 | Msa1360070 | -0.806719 | 7.175103e-50 | -8.615850e-47 |
| Msa0008600 | Msa1361580 | -0.821662 | 3.584238e-53 | -8.615850e-47 |
| Msa0008600 | Msa1363170 | -0.824767 | 6.750872e-54 | -8.615850e-47 |
| Msa0008600 | Msa1367560 | -0.837868 | 4.031979e-57 | -8.615850e-47 |
| Msa0008600 | Msa1371540 | -0.815641 | 8.331026e-52 | -8.615850e-47 |
| Msa0008600 | Msa1373420 | -0.818439 | 1.959572e-52 | -8.615850e-47 |
| Msa0008600 | Msa1375570 | -0.814849 | 1.249577e-51 | -8.615850e-47 |
| Msa0008600 | Msa1375980 | -0.824433 | 8.093449e-54 | -8.615850e-47 |
| Msa0008600 | Msa1376680 | -0.828573 | 8.338517e-55 | -8.615850e-47 |
| Msa0008600 | Msa1381340 | -0.816363 | 5.748689e-52 | -8.615850e-47 |
| Msa0008600 | Msa1386910 | -0.805877 | 1.079897e-49 | -8.615850e-47 |
| Msa0008600 | Msa1388010 | -0.841691 | 4.075915e-58 | -8.615850e-47 |
| Msa0008600 | Msa1395380 | -0.847971 | 8.248157e-60 | -8.615850e-47 |
| Msa0008600 | Msa1398150 | -0.813511 | 2.466612e-51 | -8.615850e-47 |
| Msa0008600 | Msa1400830 | -0.873187 | 1.785435e-67 | -8.615850e-47 |
| Msa0008600 | Msa1401640 | -0.817981 | 2.486725e-52 | -8.615850e-47 |
| Msa0008600 | Msa1403590 | -0.835190 | 1.938335e-56 | -8.615850e-47 |
| Msa0008600 | Msa1403820 | -0.834752 | 2.499673e-56 | -8.615850e-47 |
| Msa0008600 | Msa1408230 | -0.822100 | 2.838235e-53 | -8.615850e-47 |
| Msa0008600 | Msa1408280 | -0.802103 | 6.576208e-49 | -8.615850e-47 |
| Msa0008600 | Msa1411930 | -0.830741 | 2.475566e-55 | -8.615850e-47 |
| Msa0008600 | Msa1415510 | -0.823245 | 1.536485e-53 | -8.615850e-47 |
| Msa0008600 | Msa1423560 | -0.815512 | 8.901939e-52 | -8.615850e-47 |
| Msa0008600 | Msa1424250 | -0.805024 | 1.629954e-49 | -8.615850e-47 |
| Msa0008600 | Msa1430460 | -0.806005 | 1.014770e-49 | -8.615850e-47 |
| Msa0008600 | Msa1431510 | -0.805337 | 1.401259e-49 | -8.615850e-47 |
| Msa0008600 | Msa1440990 | -0.819022 | 1.444667e-52 | -8.615850e-47 |
| Msa0008600 | Msa1443280 | -0.826059 | 3.338728e-54 | -8.615850e-47 |
| Msa0008600 | Msa1444690 | -0.807158 | 5.795916e-50 | -8.615850e-47 |
| Msa0008600 | Msa1452800 | -0.808810 | 2.579269e-50 | -8.615850e-47 |
| Msa0008600 | Msa1454300 | -0.847582 | 1.055709e-59 | -8.615850e-47 |
| Msa0008600 | Msa1462210 | -0.809863 | 1.533165e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0008600 | MtrunA17_Chr1g0147511 | 99.138 | 232 | 2 | 0 | 1 | 232 | 1 | 232 | 8.44e-174 | 476 |
| Msa0008600 | MtrunA17_Chr3g0139261 | 83.621 | 232 | 36 | 1 | 1 | 232 | 1 | 230 | 3.43e-147 | 409 |
| Msa0008600 | MtrunA17_Chr1g0188581 | 72.152 | 237 | 61 | 2 | 1 | 232 | 1 | 237 | 2.59e-125 | 354 |
| Msa0008600 | MtrunA17_Chr6g0477471 | 68.103 | 232 | 74 | 0 | 1 | 232 | 1 | 232 | 3.46e-118 | 336 |
| Msa0008600 | MtrunA17_Chr6g0477661 | 58.772 | 228 | 92 | 1 | 1 | 228 | 1 | 226 | 1.42e-95 | 279 |
| Msa0008600 | MtrunA17_Chr6g0477681 | 53.448 | 232 | 105 | 1 | 1 | 232 | 1 | 229 | 1.06e-87 | 259 |
| Msa0008600 | MtrunA17_Chr5g0428761 | 37.229 | 231 | 138 | 2 | 5 | 229 | 3 | 232 | 8.68e-51 | 166 |
| Msa0008600 | MtrunA17_Chr8g0392461 | 37.864 | 206 | 123 | 2 | 8 | 213 | 6 | 206 | 6.13e-41 | 139 |
| Msa0008600 | MtrunA17_Chr7g0244961 | 37.963 | 216 | 131 | 1 | 7 | 222 | 43 | 255 | 3.83e-39 | 136 |
| Msa0008600 | MtrunA17_Chr2g0282971 | 34.286 | 175 | 107 | 3 | 40 | 212 | 1 | 169 | 3.15e-22 | 90.5 |
| Msa0008600 | MtrunA17_Chr8g0392481 | 45.122 | 82 | 45 | 0 | 7 | 88 | 6 | 87 | 6.82e-22 | 87.0 |
| Msa0008600 | MtrunA17_Chr8g0392471 | 32.515 | 163 | 103 | 3 | 52 | 213 | 93 | 249 | 1.29e-15 | 74.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0008600 | AT4G31330.1 | 70.464 | 237 | 63 | 2 | 1 | 231 | 1 | 236 | 2.10e-125 | 355 |
| Msa0008600 | AT5G10580.3 | 69.874 | 239 | 63 | 2 | 1 | 230 | 1 | 239 | 1.17e-120 | 343 |
| Msa0008600 | AT5G10580.1 | 70.638 | 235 | 60 | 2 | 1 | 226 | 1 | 235 | 1.05e-119 | 341 |
| Msa0008600 | AT5G10580.4 | 70.638 | 235 | 60 | 2 | 1 | 226 | 1 | 235 | 1.05e-119 | 341 |
| Msa0008600 | AT5G10580.2 | 70.270 | 185 | 47 | 1 | 1 | 177 | 1 | 185 | 7.73e-95 | 276 |
| Msa0008600 | AT5G24790.1 | 62.727 | 220 | 77 | 2 | 1 | 215 | 1 | 220 | 2.92e-89 | 264 |
| Msa0008600 | AT5G24600.1 | 34.728 | 239 | 142 | 2 | 4 | 230 | 2 | 238 | 4.13e-47 | 156 |
| Msa0008600 | AT5G24600.2 | 36.036 | 222 | 128 | 2 | 4 | 213 | 2 | 221 | 5.60e-45 | 150 |
| Msa0008600 | AT3G18215.1 | 36.493 | 211 | 134 | 0 | 3 | 213 | 2 | 212 | 8.48e-45 | 150 |
| Msa0008600 | AT5G43180.1 | 36.889 | 225 | 127 | 3 | 9 | 218 | 8 | 232 | 1.38e-36 | 129 |
| Msa0008600 | AT5G46060.1 | 33.649 | 211 | 136 | 2 | 4 | 213 | 6 | 213 | 5.97e-22 | 91.3 |
| Msa0008600 | AT3G18215.2 | 34.286 | 140 | 92 | 0 | 74 | 213 | 1 | 140 | 5.18e-20 | 84.3 |
Find 59 sgRNAs with CRISPR-Local
Find 238 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGAATATATATTTGAAATTT+TGG | 0.097168 | 1_1:-12383428 | Msa0008600:CDS |
| ATGCTAGTGGTCGTAGAAAT+TGG | 0.222133 | 1_1:-12384793 | Msa0008600:CDS |
| CTGGACTTCCTTTGTTGCTT+TGG | 0.242448 | 1_1:-12383360 | Msa0008600:CDS |
| AATTGAGGTTGTGGCCATTA+AGG | 0.286915 | 1_1:+12383681 | None:intergenic |
| CCACTAAATGATGCAATATA+TGG | 0.301604 | 1_1:-12383604 | Msa0008600:CDS |
| ATGCTATTTGGATGTGATAT+TGG | 0.304552 | 1_1:-12384906 | Msa0008600:CDS |
| AATATAACAAACTACCTATT+AGG | 0.319343 | 1_1:-12384955 | Msa0008600:five_prime_UTR |
| TTAGCATTGGTTACCATGTT+TGG | 0.319355 | 1_1:-12384865 | Msa0008600:CDS |
| ATCACTAAGGAACACAATAA+TGG | 0.320459 | 1_1:-12383710 | Msa0008600:CDS |
| CCATATATTGCATCATTTAG+TGG | 0.330574 | 1_1:+12383604 | None:intergenic |
| TTGGTTACCATGTTTGGCTT+TGG | 0.343248 | 1_1:-12384859 | Msa0008600:CDS |
| CCATGTTTGGCTTTGGCATA+AGG | 0.345477 | 1_1:-12384852 | Msa0008600:CDS |
| GGAATGGAGGAAATGCTATT+TGG | 0.349081 | 1_1:-12384918 | Msa0008600:CDS |
| TCACTAAGGAACACAATAAT+GGG | 0.357357 | 1_1:-12383709 | Msa0008600:CDS |
| ACTTCTCTACTATATATATA+TGG | 0.369119 | 1_1:+12385048 | None:intergenic |
| GGATGTGATATTGGTTCCTT+TGG | 0.381322 | 1_1:-12384897 | Msa0008600:CDS |
| GAGCAAAGGAAAACCATAAC+AGG | 0.393179 | 1_1:+12383328 | None:intergenic |
| ATCTTTGTGTTTCTCCTAAT+AGG | 0.395961 | 1_1:+12384941 | None:intergenic |
| AAAATTTCAAATATATATTC+TGG | 0.418167 | 1_1:+12383430 | None:intergenic |
| TTTCCTTTGCTCTCTTGCTA+TGG | 0.429928 | 1_1:-12383317 | Msa0008600:CDS |
| TAAATCTTATTGCAAGAGAA+TGG | 0.439278 | 1_1:+12383509 | None:intergenic |
| CAGCCACACACAACCATTGT+TGG | 0.455340 | 1_1:-12384821 | Msa0008600:CDS |
| AATATTGTGACTGCAATTGT+TGG | 0.470712 | 1_1:-12383103 | Msa0008600:three_prime_UTR |
| AAAGATGAATGTGGATCAAA+AGG | 0.472647 | 1_1:-12383248 | Msa0008600:CDS |
| TGCTAGTGGTCGTAGAAATT+GGG | 0.473756 | 1_1:-12384792 | Msa0008600:CDS |
| TTTGTGTACACTAGTGGAAA+GGG | 0.482848 | 1_1:-12383271 | Msa0008600:CDS |
| TGGAGCACATGGTGAATTCA+TGG | 0.497913 | 1_1:-12383584 | Msa0008600:CDS |
| TCTGGTGTCACAAGTGACAT+AGG | 0.507387 | 1_1:+12383448 | None:intergenic |
| TTGGCAATGCTAATTAGCAT+TGG | 0.515120 | 1_1:-12384878 | Msa0008600:CDS |
| ACATAGTAAAATTGAGGTTG+TGG | 0.520784 | 1_1:+12383672 | None:intergenic |
| GGAGAAACACAAAGATGGAA+TGG | 0.530549 | 1_1:-12384934 | Msa0008600:exon |
| AATGGCAAAAGAATGAGAAG+AGG | 0.536492 | 1_1:+12383527 | None:intergenic |
| ACCTGAACATAGTAAAATTG+AGG | 0.548897 | 1_1:+12383666 | None:intergenic |
| TTGGGTTAATGCTATGATGA+AGG | 0.554864 | 1_1:-12384774 | Msa0008600:intron |
| TCCTAGCTGTGCAATCACTA+AGG | 0.556695 | 1_1:-12383723 | Msa0008600:CDS |
| TATTAGGAGAAACACAAAGA+TGG | 0.561176 | 1_1:-12384939 | Msa0008600:exon |
| TGGCATAAAGAGAGTACAAG+AGG | 0.564636 | 1_1:-12384990 | Msa0008600:five_prime_UTR |
| CCTTATGCCAAAGCCAAACA+TGG | 0.572427 | 1_1:+12384852 | None:intergenic |
| AAATCAAGATTGTAAAGCAC+AGG | 0.577484 | 1_1:+12383292 | None:intergenic |
| GATGAATGTGGATCAAAAGG+AGG | 0.581198 | 1_1:-12383245 | Msa0008600:CDS |
| GAACCATAGCAAGAGAGCAA+AGG | 0.582292 | 1_1:+12383314 | None:intergenic |
| CTGGTGTCACAAGTGACATA+GGG | 0.583728 | 1_1:+12383449 | None:intergenic |
| TCCTTAGTGATTGCACAGCT+AGG | 0.598866 | 1_1:+12383722 | None:intergenic |
| GAAACACAAAGATGGAATGG+AGG | 0.599964 | 1_1:-12384931 | Msa0008600:exon |
| ATATATACACAAAACAATTG+TGG | 0.602016 | 1_1:-12383143 | Msa0008600:three_prime_UTR |
| ATGAGAAGAGGAAAATTGTG+AGG | 0.605718 | 1_1:+12383539 | None:intergenic |
| ACAAGTGACATAGGGTCTTG+AGG | 0.610415 | 1_1:+12383457 | None:intergenic |
| ACATCAATGAAAGATGAATG+TGG | 0.624140 | 1_1:+12385100 | None:intergenic |
| CATAAAGAGAGTACAAGAGG+AGG | 0.628247 | 1_1:-12384987 | Msa0008600:five_prime_UTR |
| TGGAAAGGGAAAGATGAATG+TGG | 0.637565 | 1_1:-12383257 | Msa0008600:CDS |
| ATATATATGGCAAATACCAA+CGG | 0.639503 | 1_1:+12385061 | None:intergenic |
| ATTGTTGGCATCAATGCTAG+TGG | 0.645700 | 1_1:-12384806 | Msa0008600:CDS |
| CACTAAGGAACACAATAATG+GGG | 0.646915 | 1_1:-12383708 | Msa0008600:CDS |
| ACTAGCATTGATGCCAACAA+TGG | 0.649656 | 1_1:+12384808 | None:intergenic |
| ATGCTAATTAGCATTGCCAA+AGG | 0.660900 | 1_1:+12384881 | None:intergenic |
| GAACACATATACATCGCCGT+TGG | 0.668288 | 1_1:-12385077 | Msa0008600:five_prime_UTR |
| ATGCCAACAATGGTTGTGTG+TGG | 0.695851 | 1_1:+12384818 | None:intergenic |
| GATGCAATATATGGAGCACA+TGG | 0.696776 | 1_1:-12383595 | Msa0008600:CDS |
| ACTAAGGAACACAATAATGG+GGG | 0.700456 | 1_1:-12383707 | Msa0008600:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAAATGAAAAGAAATATAAA+TGG | + | chr1_1:12383737-12383756 | None:intergenic | 10.0% |
| !!! | GTTCTTTAATTTTTTATTTT+TGG | - | chr1_1:12383989-12384008 | Msa0008600:intron | 10.0% |
| !! | TAATATATCTTCAAAATAAT+AGG | - | chr1_1:12384171-12384190 | Msa0008600:intron | 10.0% |
| !!! | TCATATATAAGATTTTAAAA+GGG | + | chr1_1:12384260-12384279 | None:intergenic | 10.0% |
| !!! | ATCATATATAAGATTTTAAA+AGG | + | chr1_1:12384261-12384280 | None:intergenic | 10.0% |
| !! | AAAATTTCAAATATATATTC+TGG | + | chr1_1:12384613-12384632 | None:intergenic | 10.0% |
| !!! | AGAATATATATTTGAAATTT+TGG | - | chr1_1:12384612-12384631 | Msa0008600:intron | 10.0% |
| !! | TAAATGAAAAGAAATATAAA+TGG | + | chr1_1:12383737-12383756 | None:intergenic | 10.0% |
| !!! | GTTCTTTAATTTTTTATTTT+TGG | - | chr1_1:12383989-12384008 | Msa0008600:intron | 10.0% |
| !! | TAATATATCTTCAAAATAAT+AGG | - | chr1_1:12384171-12384190 | Msa0008600:intron | 10.0% |
| !!! | TCATATATAAGATTTTAAAA+GGG | + | chr1_1:12384260-12384279 | None:intergenic | 10.0% |
| !!! | ATCATATATAAGATTTTAAA+AGG | + | chr1_1:12384261-12384280 | None:intergenic | 10.0% |
| !! | AAAATTTCAAATATATATTC+TGG | + | chr1_1:12384613-12384632 | None:intergenic | 10.0% |
| !!! | AGAATATATATTTGAAATTT+TGG | - | chr1_1:12384612-12384631 | Msa0008600:intron | 10.0% |
| !! | CATAATGATAAAGATTTATA+GGG | + | chr1_1:12383335-12383354 | None:intergenic | 15.0% |
| !! | TCATAATGATAAAGATTTAT+AGG | + | chr1_1:12383336-12383355 | None:intergenic | 15.0% |
| !!! | ATTTTTTTTTCATTTGAAGA+AGG | + | chr1_1:12383413-12383432 | None:intergenic | 15.0% |
| !!! | AGAAATCATATATTTTATGA+TGG | - | chr1_1:12383472-12383491 | Msa0008600:CDS | 15.0% |
| !!! | GTATTTTATTGATTTTATGA+GGG | - | chr1_1:12383494-12383513 | Msa0008600:CDS | 15.0% |
| !! | TTTATTATTACATTAGTTAG+TGG | + | chr1_1:12383920-12383939 | None:intergenic | 15.0% |
| !! | GATATATTATTATAGAACTA+GGG | + | chr1_1:12384160-12384179 | None:intergenic | 15.0% |
| !! | AGATATATTATTATAGAACT+AGG | + | chr1_1:12384161-12384180 | None:intergenic | 15.0% |
| !! | TAAAAATTCTACAAATTGAA+AGG | - | chr1_1:12384960-12384979 | Msa0008600:five_prime_UTR | 15.0% |
| !!! | TATAAAAAAAAAGTGTAAGA+TGG | - | chr1_1:12385024-12385043 | Msa0008600:five_prime_UTR | 15.0% |
| !! | CATAATGATAAAGATTTATA+GGG | + | chr1_1:12383335-12383354 | None:intergenic | 15.0% |
| !! | TCATAATGATAAAGATTTAT+AGG | + | chr1_1:12383336-12383355 | None:intergenic | 15.0% |
| !!! | ATTTTTTTTTCATTTGAAGA+AGG | + | chr1_1:12383413-12383432 | None:intergenic | 15.0% |
| !!! | AGAAATCATATATTTTATGA+TGG | - | chr1_1:12383472-12383491 | Msa0008600:CDS | 15.0% |
| !!! | GTATTTTATTGATTTTATGA+GGG | - | chr1_1:12383494-12383513 | Msa0008600:CDS | 15.0% |
| !! | TTTATTATTACATTAGTTAG+TGG | + | chr1_1:12383920-12383939 | None:intergenic | 15.0% |
| !! | GATATATTATTATAGAACTA+GGG | + | chr1_1:12384160-12384179 | None:intergenic | 15.0% |
| !! | AGATATATTATTATAGAACT+AGG | + | chr1_1:12384161-12384180 | None:intergenic | 15.0% |
| !! | TAAAAATTCTACAAATTGAA+AGG | - | chr1_1:12384960-12384979 | Msa0008600:five_prime_UTR | 15.0% |
| !!! | TATAAAAAAAAAGTGTAAGA+TGG | - | chr1_1:12385024-12385043 | Msa0008600:five_prime_UTR | 15.0% |
| !! | ACTTCTCTACTATATATATA+TGG | + | chr1_1:12382995-12383014 | None:intergenic | 20.0% |
| !! | ATTAACTCCAAAAACAAAAT+TGG | - | chr1_1:12383024-12383043 | Msa0008600:three_prime_UTR | 20.0% |
| !! | AATATAACAAACTACCTATT+AGG | - | chr1_1:12383085-12383104 | Msa0008600:three_prime_UTR | 20.0% |
| !!! | GGTATTTTATTGATTTTATG+AGG | - | chr1_1:12383493-12383512 | Msa0008600:CDS | 20.0% |
| !!! | TTTTTCACTATCAAATTGTT+AGG | - | chr1_1:12383630-12383649 | Msa0008600:CDS | 20.0% |
| !! | TATATGGTATAAATACTCTA+TGG | + | chr1_1:12383703-12383722 | None:intergenic | 20.0% |
| !! | AATGGAATATGCAATATATA+TGG | + | chr1_1:12383719-12383738 | None:intergenic | 20.0% |
| !!! | ATATTTGAAATTTTGGAGAA+AGG | - | chr1_1:12384619-12384638 | Msa0008600:intron | 20.0% |
| !! | ATATATACACAAAACAATTG+TGG | - | chr1_1:12384897-12384916 | Msa0008600:CDS | 20.0% |
| !! | ACTTCTCTACTATATATATA+TGG | + | chr1_1:12382995-12383014 | None:intergenic | 20.0% |
| !! | ATTAACTCCAAAAACAAAAT+TGG | - | chr1_1:12383024-12383043 | Msa0008600:three_prime_UTR | 20.0% |
| !! | AATATAACAAACTACCTATT+AGG | - | chr1_1:12383085-12383104 | Msa0008600:three_prime_UTR | 20.0% |
| !!! | GGTATTTTATTGATTTTATG+AGG | - | chr1_1:12383493-12383512 | Msa0008600:CDS | 20.0% |
| !!! | TTTTTCACTATCAAATTGTT+AGG | - | chr1_1:12383630-12383649 | Msa0008600:CDS | 20.0% |
| !! | TATATGGTATAAATACTCTA+TGG | + | chr1_1:12383703-12383722 | None:intergenic | 20.0% |
| !! | AATGGAATATGCAATATATA+TGG | + | chr1_1:12383719-12383738 | None:intergenic | 20.0% |
| !!! | ATATTTGAAATTTTGGAGAA+AGG | - | chr1_1:12384619-12384638 | Msa0008600:intron | 20.0% |
| !! | ATATATACACAAAACAATTG+TGG | - | chr1_1:12384897-12384916 | Msa0008600:CDS | 20.0% |
| ! | ATATATATGGCAAATACCAA+CGG | + | chr1_1:12382982-12383001 | None:intergenic | 25.0% |
| !!! | TCCAAAAACAAAATTGGTTT+TGG | - | chr1_1:12383030-12383049 | Msa0008600:three_prime_UTR | 25.0% |
| !!! | TTTATGAGGGTATTTTATGA+TGG | - | chr1_1:12383507-12383526 | Msa0008600:CDS | 25.0% |
| ! | GCTTAAATTCTTCAACTATT+TGG | - | chr1_1:12383574-12383593 | Msa0008600:CDS | 25.0% |
| ! | TGTCCTCAAATATACTAAAT+GGG | + | chr1_1:12383607-12383626 | None:intergenic | 25.0% |
| ! | ATGTCCTCAAATATACTAAA+TGG | + | chr1_1:12383608-12383627 | None:intergenic | 25.0% |
| ! | TGTACGAACAAGAATAAATT+AGG | + | chr1_1:12383766-12383785 | None:intergenic | 25.0% |
| ! | TCTGTCTAAATGGTATAATT+TGG | - | chr1_1:12383838-12383857 | Msa0008600:intron | 25.0% |
| !! | ACGTTATTTATGATGATGTT+AGG | - | chr1_1:12384228-12384247 | Msa0008600:intron | 25.0% |
| ! | TAAATCTTATTGCAAGAGAA+TGG | + | chr1_1:12384534-12384553 | None:intergenic | 25.0% |
| ! | ATATATATGGCAAATACCAA+CGG | + | chr1_1:12382982-12383001 | None:intergenic | 25.0% |
| !!! | TCCAAAAACAAAATTGGTTT+TGG | - | chr1_1:12383030-12383049 | Msa0008600:three_prime_UTR | 25.0% |
| !!! | TTTATGAGGGTATTTTATGA+TGG | - | chr1_1:12383507-12383526 | Msa0008600:CDS | 25.0% |
| ! | GCTTAAATTCTTCAACTATT+TGG | - | chr1_1:12383574-12383593 | Msa0008600:CDS | 25.0% |
| ! | TGTCCTCAAATATACTAAAT+GGG | + | chr1_1:12383607-12383626 | None:intergenic | 25.0% |
| ! | ATGTCCTCAAATATACTAAA+TGG | + | chr1_1:12383608-12383627 | None:intergenic | 25.0% |
| ! | TGTACGAACAAGAATAAATT+AGG | + | chr1_1:12383766-12383785 | None:intergenic | 25.0% |
| ! | TCTGTCTAAATGGTATAATT+TGG | - | chr1_1:12383838-12383857 | Msa0008600:intron | 25.0% |
| !! | ACGTTATTTATGATGATGTT+AGG | - | chr1_1:12384228-12384247 | Msa0008600:intron | 25.0% |
| ! | TAAATCTTATTGCAAGAGAA+TGG | + | chr1_1:12384534-12384553 | None:intergenic | 25.0% |
| !!! | GCCAAAACCAATTTTGTTTT+TGG | + | chr1_1:12383034-12383053 | None:intergenic | 30.0% |
| ATCTTTGTGTTTCTCCTAAT+AGG | + | chr1_1:12383102-12383121 | None:intergenic | 30.0% | |
| TATTAGGAGAAACACAAAGA+TGG | - | chr1_1:12383101-12383120 | Msa0008600:three_prime_UTR | 30.0% | |
| ! | ATGCTATTTGGATGTGATAT+TGG | - | chr1_1:12383134-12383153 | Msa0008600:three_prime_UTR | 30.0% |
| TGTCCCATTTAGTATATTTG+AGG | - | chr1_1:12383601-12383620 | Msa0008600:CDS | 30.0% | |
| TAGCTTATCTTGAACATCAA+TGG | - | chr1_1:12383665-12383684 | Msa0008600:CDS | 30.0% | |
| ! | TTCTTTTGTGTTTGGTTGTT+AGG | + | chr1_1:12383803-12383822 | None:intergenic | 30.0% |
| ! | GTTTTGCTTTCTTTTGTGTT+TGG | + | chr1_1:12383811-12383830 | None:intergenic | 30.0% |
| AACAGAATGTTCTGTCTAAA+TGG | - | chr1_1:12383828-12383847 | Msa0008600:intron | 30.0% | |
| TTTGTACATGCACATTATCT+TGG | + | chr1_1:12383896-12383915 | None:intergenic | 30.0% | |
| AGAGATTGAAAACTATGTCT+AGG | + | chr1_1:12384099-12384118 | None:intergenic | 30.0% | |
| TTATAGAACTAGGGTTTAGA+AGG | + | chr1_1:12384151-12384170 | None:intergenic | 30.0% | |
| TCAAAATAATAGGTACCATG+AGG | - | chr1_1:12384181-12384200 | Msa0008600:intron | 30.0% | |
| TGTCATAAGTTATAACCTCA+TGG | + | chr1_1:12384199-12384218 | None:intergenic | 30.0% | |
| ATGATGTGTTTGAATATGAC+AGG | - | chr1_1:12384276-12384295 | Msa0008600:intron | 30.0% | |
| ATCACTAAGGAACACAATAA+TGG | - | chr1_1:12384330-12384349 | Msa0008600:intron | 30.0% | |
| TCACTAAGGAACACAATAAT+GGG | - | chr1_1:12384331-12384350 | Msa0008600:intron | 30.0% | |
| ACATAGTAAAATTGAGGTTG+TGG | + | chr1_1:12384371-12384390 | None:intergenic | 30.0% | |
| ! | ACCTCAATTTTACTATGTTC+AGG | - | chr1_1:12384373-12384392 | Msa0008600:intron | 30.0% |
| ACCTGAACATAGTAAAATTG+AGG | + | chr1_1:12384377-12384396 | None:intergenic | 30.0% | |
| CCATATATTGCATCATTTAG+TGG | + | chr1_1:12384439-12384458 | None:intergenic | 30.0% | |
| CCACTAAATGATGCAATATA+TGG | - | chr1_1:12384436-12384455 | Msa0008600:intron | 30.0% | |
| ! | TTTTGAATGCTGTTGGAAAT+AGG | - | chr1_1:12384647-12384666 | Msa0008600:intron | 30.0% |
| AAATCAAGATTGTAAAGCAC+AGG | + | chr1_1:12384751-12384770 | None:intergenic | 30.0% | |
| AAAGATGAATGTGGATCAAA+AGG | - | chr1_1:12384792-12384811 | Msa0008600:CDS | 30.0% | |
| AATATTGTGACTGCAATTGT+TGG | - | chr1_1:12384937-12384956 | Msa0008600:exon | 30.0% | |
| !!! | GCCAAAACCAATTTTGTTTT+TGG | + | chr1_1:12383034-12383053 | None:intergenic | 30.0% |
| ATCTTTGTGTTTCTCCTAAT+AGG | + | chr1_1:12383102-12383121 | None:intergenic | 30.0% | |
| TATTAGGAGAAACACAAAGA+TGG | - | chr1_1:12383101-12383120 | Msa0008600:three_prime_UTR | 30.0% | |
| ! | ATGCTATTTGGATGTGATAT+TGG | - | chr1_1:12383134-12383153 | Msa0008600:three_prime_UTR | 30.0% |
| TGTCCCATTTAGTATATTTG+AGG | - | chr1_1:12383601-12383620 | Msa0008600:CDS | 30.0% | |
| TAGCTTATCTTGAACATCAA+TGG | - | chr1_1:12383665-12383684 | Msa0008600:CDS | 30.0% | |
| ! | TTCTTTTGTGTTTGGTTGTT+AGG | + | chr1_1:12383803-12383822 | None:intergenic | 30.0% |
| ! | GTTTTGCTTTCTTTTGTGTT+TGG | + | chr1_1:12383811-12383830 | None:intergenic | 30.0% |
| AACAGAATGTTCTGTCTAAA+TGG | - | chr1_1:12383828-12383847 | Msa0008600:intron | 30.0% | |
| TTTGTACATGCACATTATCT+TGG | + | chr1_1:12383896-12383915 | None:intergenic | 30.0% | |
| AGAGATTGAAAACTATGTCT+AGG | + | chr1_1:12384099-12384118 | None:intergenic | 30.0% | |
| TTATAGAACTAGGGTTTAGA+AGG | + | chr1_1:12384151-12384170 | None:intergenic | 30.0% | |
| TCAAAATAATAGGTACCATG+AGG | - | chr1_1:12384181-12384200 | Msa0008600:intron | 30.0% | |
| TGTCATAAGTTATAACCTCA+TGG | + | chr1_1:12384199-12384218 | None:intergenic | 30.0% | |
| ATGATGTGTTTGAATATGAC+AGG | - | chr1_1:12384276-12384295 | Msa0008600:intron | 30.0% | |
| ATCACTAAGGAACACAATAA+TGG | - | chr1_1:12384330-12384349 | Msa0008600:intron | 30.0% | |
| TCACTAAGGAACACAATAAT+GGG | - | chr1_1:12384331-12384350 | Msa0008600:intron | 30.0% | |
| ACATAGTAAAATTGAGGTTG+TGG | + | chr1_1:12384371-12384390 | None:intergenic | 30.0% | |
| ! | ACCTCAATTTTACTATGTTC+AGG | - | chr1_1:12384373-12384392 | Msa0008600:intron | 30.0% |
| ACCTGAACATAGTAAAATTG+AGG | + | chr1_1:12384377-12384396 | None:intergenic | 30.0% | |
| CCATATATTGCATCATTTAG+TGG | + | chr1_1:12384439-12384458 | None:intergenic | 30.0% | |
| CCACTAAATGATGCAATATA+TGG | - | chr1_1:12384436-12384455 | Msa0008600:intron | 30.0% | |
| ! | TTTTGAATGCTGTTGGAAAT+AGG | - | chr1_1:12384647-12384666 | Msa0008600:intron | 30.0% |
| AAATCAAGATTGTAAAGCAC+AGG | + | chr1_1:12384751-12384770 | None:intergenic | 30.0% | |
| AAAGATGAATGTGGATCAAA+AGG | - | chr1_1:12384792-12384811 | Msa0008600:CDS | 30.0% | |
| AATATTGTGACTGCAATTGT+TGG | - | chr1_1:12384937-12384956 | Msa0008600:exon | 30.0% | |
| ATGCTAATTAGCATTGCCAA+AGG | + | chr1_1:12383162-12383181 | None:intergenic | 35.0% | |
| TTGGCAATGCTAATTAGCAT+TGG | - | chr1_1:12383162-12383181 | Msa0008600:three_prime_UTR | 35.0% | |
| !! | TTAGCATTGGTTACCATGTT+TGG | - | chr1_1:12383175-12383194 | Msa0008600:three_prime_UTR | 35.0% |
| TTGGGTTAATGCTATGATGA+AGG | - | chr1_1:12383266-12383285 | Msa0008600:CDS | 35.0% | |
| ! | TTCATTTGAAGAAGGTGTGA+GGG | + | chr1_1:12383405-12383424 | None:intergenic | 35.0% |
| ! | TTTCATTTGAAGAAGGTGTG+AGG | + | chr1_1:12383406-12383425 | None:intergenic | 35.0% |
| ! | TGTCGTGTTGATATGTCATT+TGG | + | chr1_1:12384055-12384074 | None:intergenic | 35.0% |
| TGAAAACTATGTCTAGGTAG+TGG | + | chr1_1:12384093-12384112 | None:intergenic | 35.0% | |
| CACTAAGGAACACAATAATG+GGG | - | chr1_1:12384332-12384351 | Msa0008600:intron | 35.0% | |
| ACTAAGGAACACAATAATGG+GGG | - | chr1_1:12384333-12384352 | Msa0008600:intron | 35.0% | |
| ATGAGAAGAGGAAAATTGTG+AGG | + | chr1_1:12384504-12384523 | None:intergenic | 35.0% | |
| AATGGCAAAAGAATGAGAAG+AGG | + | chr1_1:12384516-12384535 | None:intergenic | 35.0% | |
| ! | GGTTTCATTTTGAATGCTGT+TGG | - | chr1_1:12384640-12384659 | Msa0008600:intron | 35.0% |
| CCAAAAATCCAAAGCAACAA+AGG | + | chr1_1:12384691-12384710 | None:intergenic | 35.0% | |
| !!! | CCTTTGTTGCTTTGGATTTT+TGG | - | chr1_1:12384688-12384707 | Msa0008600:intron | 35.0% |
| !!! | TTGGATTTTTGGTCCTGTTA+TGG | - | chr1_1:12384699-12384718 | Msa0008600:intron | 35.0% |
| ! | CTTGATTTTGTGTACACTAG+TGG | - | chr1_1:12384763-12384782 | Msa0008600:intron | 35.0% |
| ! | TTTTGTGTACACTAGTGGAA+AGG | - | chr1_1:12384768-12384787 | Msa0008600:intron | 35.0% |
| TTTGTGTACACTAGTGGAAA+GGG | - | chr1_1:12384769-12384788 | Msa0008600:intron | 35.0% | |
| ATGCTAATTAGCATTGCCAA+AGG | + | chr1_1:12383162-12383181 | None:intergenic | 35.0% | |
| TTGGCAATGCTAATTAGCAT+TGG | - | chr1_1:12383162-12383181 | Msa0008600:three_prime_UTR | 35.0% | |
| !! | TTAGCATTGGTTACCATGTT+TGG | - | chr1_1:12383175-12383194 | Msa0008600:three_prime_UTR | 35.0% |
| TTGGGTTAATGCTATGATGA+AGG | - | chr1_1:12383266-12383285 | Msa0008600:CDS | 35.0% | |
| ! | TTCATTTGAAGAAGGTGTGA+GGG | + | chr1_1:12383405-12383424 | None:intergenic | 35.0% |
| ! | TTTCATTTGAAGAAGGTGTG+AGG | + | chr1_1:12383406-12383425 | None:intergenic | 35.0% |
| ! | TGTCGTGTTGATATGTCATT+TGG | + | chr1_1:12384055-12384074 | None:intergenic | 35.0% |
| TGAAAACTATGTCTAGGTAG+TGG | + | chr1_1:12384093-12384112 | None:intergenic | 35.0% | |
| CACTAAGGAACACAATAATG+GGG | - | chr1_1:12384332-12384351 | Msa0008600:intron | 35.0% | |
| ACTAAGGAACACAATAATGG+GGG | - | chr1_1:12384333-12384352 | Msa0008600:intron | 35.0% | |
| ATGAGAAGAGGAAAATTGTG+AGG | + | chr1_1:12384504-12384523 | None:intergenic | 35.0% | |
| AATGGCAAAAGAATGAGAAG+AGG | + | chr1_1:12384516-12384535 | None:intergenic | 35.0% | |
| ! | GGTTTCATTTTGAATGCTGT+TGG | - | chr1_1:12384640-12384659 | Msa0008600:intron | 35.0% |
| CCAAAAATCCAAAGCAACAA+AGG | + | chr1_1:12384691-12384710 | None:intergenic | 35.0% | |
| !!! | CCTTTGTTGCTTTGGATTTT+TGG | - | chr1_1:12384688-12384707 | Msa0008600:intron | 35.0% |
| !!! | TTGGATTTTTGGTCCTGTTA+TGG | - | chr1_1:12384699-12384718 | Msa0008600:intron | 35.0% |
| ! | CTTGATTTTGTGTACACTAG+TGG | - | chr1_1:12384763-12384782 | Msa0008600:intron | 35.0% |
| ! | TTTTGTGTACACTAGTGGAA+AGG | - | chr1_1:12384768-12384787 | Msa0008600:intron | 35.0% |
| TTTGTGTACACTAGTGGAAA+GGG | - | chr1_1:12384769-12384788 | Msa0008600:intron | 35.0% | |
| ! | TGGCATAAAGAGAGTACAAG+AGG | - | chr1_1:12383050-12383069 | Msa0008600:three_prime_UTR | 40.0% |
| ! | CATAAAGAGAGTACAAGAGG+AGG | - | chr1_1:12383053-12383072 | Msa0008600:three_prime_UTR | 40.0% |
| GGAGAAACACAAAGATGGAA+TGG | - | chr1_1:12383106-12383125 | Msa0008600:three_prime_UTR | 40.0% | |
| GAAACACAAAGATGGAATGG+AGG | - | chr1_1:12383109-12383128 | Msa0008600:three_prime_UTR | 40.0% | |
| GGAATGGAGGAAATGCTATT+TGG | - | chr1_1:12383122-12383141 | Msa0008600:three_prime_UTR | 40.0% | |
| !! | GGATGTGATATTGGTTCCTT+TGG | - | chr1_1:12383143-12383162 | Msa0008600:three_prime_UTR | 40.0% |
| ! | TTGGTTACCATGTTTGGCTT+TGG | - | chr1_1:12383181-12383200 | Msa0008600:three_prime_UTR | 40.0% |
| !! | ACTAGCATTGATGCCAACAA+TGG | + | chr1_1:12383235-12383254 | None:intergenic | 40.0% |
| ATTGTTGGCATCAATGCTAG+TGG | - | chr1_1:12383234-12383253 | Msa0008600:CDS | 40.0% | |
| ATGCTAGTGGTCGTAGAAAT+TGG | - | chr1_1:12383247-12383266 | Msa0008600:CDS | 40.0% | |
| TGCTAGTGGTCGTAGAAATT+GGG | - | chr1_1:12383248-12383267 | Msa0008600:CDS | 40.0% | |
| ! | TCATTTGAAGAAGGTGTGAG+GGG | + | chr1_1:12383404-12383423 | None:intergenic | 40.0% |
| TGGTGAATATCCTATTCGAG+TGG | - | chr1_1:12383858-12383877 | Msa0008600:intron | 40.0% | |
| GGTGAATATCCTATTCGAGT+GGG | - | chr1_1:12383859-12383878 | Msa0008600:intron | 40.0% | |
| TAACAACAACCCACTCGAAT+AGG | + | chr1_1:12383871-12383890 | None:intergenic | 40.0% | |
| ! | AATAATGGGGGCAACCTTAA+TGG | - | chr1_1:12384345-12384364 | Msa0008600:intron | 40.0% |
| AATTGAGGTTGTGGCCATTA+AGG | + | chr1_1:12384362-12384381 | None:intergenic | 40.0% | |
| GATGCAATATATGGAGCACA+TGG | - | chr1_1:12384445-12384464 | Msa0008600:intron | 40.0% | |
| ! | GGAAATAGGCTTTTCTATGC+TGG | - | chr1_1:12384661-12384680 | Msa0008600:intron | 40.0% |
| GAGCAAAGGAAAACCATAAC+AGG | + | chr1_1:12384715-12384734 | None:intergenic | 40.0% | |
| TTTCCTTTGCTCTCTTGCTA+TGG | - | chr1_1:12384723-12384742 | Msa0008600:intron | 40.0% | |
| TGGAAAGGGAAAGATGAATG+TGG | - | chr1_1:12384783-12384802 | Msa0008600:CDS | 40.0% | |
| GATGAATGTGGATCAAAAGG+AGG | - | chr1_1:12384795-12384814 | Msa0008600:CDS | 40.0% | |
| ! | TGGCATAAAGAGAGTACAAG+AGG | - | chr1_1:12383050-12383069 | Msa0008600:three_prime_UTR | 40.0% |
| ! | CATAAAGAGAGTACAAGAGG+AGG | - | chr1_1:12383053-12383072 | Msa0008600:three_prime_UTR | 40.0% |
| GGAGAAACACAAAGATGGAA+TGG | - | chr1_1:12383106-12383125 | Msa0008600:three_prime_UTR | 40.0% | |
| GAAACACAAAGATGGAATGG+AGG | - | chr1_1:12383109-12383128 | Msa0008600:three_prime_UTR | 40.0% | |
| GGAATGGAGGAAATGCTATT+TGG | - | chr1_1:12383122-12383141 | Msa0008600:three_prime_UTR | 40.0% | |
| !! | GGATGTGATATTGGTTCCTT+TGG | - | chr1_1:12383143-12383162 | Msa0008600:three_prime_UTR | 40.0% |
| ! | TTGGTTACCATGTTTGGCTT+TGG | - | chr1_1:12383181-12383200 | Msa0008600:three_prime_UTR | 40.0% |
| !! | ACTAGCATTGATGCCAACAA+TGG | + | chr1_1:12383235-12383254 | None:intergenic | 40.0% |
| ATTGTTGGCATCAATGCTAG+TGG | - | chr1_1:12383234-12383253 | Msa0008600:CDS | 40.0% | |
| ATGCTAGTGGTCGTAGAAAT+TGG | - | chr1_1:12383247-12383266 | Msa0008600:CDS | 40.0% | |
| TGCTAGTGGTCGTAGAAATT+GGG | - | chr1_1:12383248-12383267 | Msa0008600:CDS | 40.0% | |
| ! | TCATTTGAAGAAGGTGTGAG+GGG | + | chr1_1:12383404-12383423 | None:intergenic | 40.0% |
| TGGTGAATATCCTATTCGAG+TGG | - | chr1_1:12383858-12383877 | Msa0008600:intron | 40.0% | |
| GGTGAATATCCTATTCGAGT+GGG | - | chr1_1:12383859-12383878 | Msa0008600:intron | 40.0% | |
| TAACAACAACCCACTCGAAT+AGG | + | chr1_1:12383871-12383890 | None:intergenic | 40.0% | |
| ! | AATAATGGGGGCAACCTTAA+TGG | - | chr1_1:12384345-12384364 | Msa0008600:intron | 40.0% |
| AATTGAGGTTGTGGCCATTA+AGG | + | chr1_1:12384362-12384381 | None:intergenic | 40.0% | |
| GATGCAATATATGGAGCACA+TGG | - | chr1_1:12384445-12384464 | Msa0008600:intron | 40.0% | |
| ! | GGAAATAGGCTTTTCTATGC+TGG | - | chr1_1:12384661-12384680 | Msa0008600:intron | 40.0% |
| GAGCAAAGGAAAACCATAAC+AGG | + | chr1_1:12384715-12384734 | None:intergenic | 40.0% | |
| TTTCCTTTGCTCTCTTGCTA+TGG | - | chr1_1:12384723-12384742 | Msa0008600:intron | 40.0% | |
| TGGAAAGGGAAAGATGAATG+TGG | - | chr1_1:12384783-12384802 | Msa0008600:CDS | 40.0% | |
| GATGAATGTGGATCAAAAGG+AGG | - | chr1_1:12384795-12384814 | Msa0008600:CDS | 40.0% | |
| GAACACATATACATCGCCGT+TGG | - | chr1_1:12382963-12382982 | Msa0008600:three_prime_UTR | 45.0% | |
| CCTTATGCCAAAGCCAAACA+TGG | + | chr1_1:12383191-12383210 | None:intergenic | 45.0% | |
| !! | CCATGTTTGGCTTTGGCATA+AGG | - | chr1_1:12383188-12383207 | Msa0008600:three_prime_UTR | 45.0% |
| ATGCCAACAATGGTTGTGTG+TGG | + | chr1_1:12383225-12383244 | None:intergenic | 45.0% | |
| ! | CATTTGAAGAAGGTGTGAGG+GGG | + | chr1_1:12383403-12383422 | None:intergenic | 45.0% |
| TCCTAGCTGTGCAATCACTA+AGG | - | chr1_1:12384317-12384336 | Msa0008600:intron | 45.0% | |
| TCCTTAGTGATTGCACAGCT+AGG | + | chr1_1:12384321-12384340 | None:intergenic | 45.0% | |
| TGGAGCACATGGTGAATTCA+TGG | - | chr1_1:12384456-12384475 | Msa0008600:intron | 45.0% | |
| ACAAGTGACATAGGGTCTTG+AGG | + | chr1_1:12384586-12384605 | None:intergenic | 45.0% | |
| !! | CTGGTGTCACAAGTGACATA+GGG | + | chr1_1:12384594-12384613 | None:intergenic | 45.0% |
| !! | TCTGGTGTCACAAGTGACAT+AGG | + | chr1_1:12384595-12384614 | None:intergenic | 45.0% |
| ! | CTGGACTTCCTTTGTTGCTT+TGG | - | chr1_1:12384680-12384699 | Msa0008600:intron | 45.0% |
| GAACCATAGCAAGAGAGCAA+AGG | + | chr1_1:12384729-12384748 | None:intergenic | 45.0% | |
| GAACACATATACATCGCCGT+TGG | - | chr1_1:12382963-12382982 | Msa0008600:three_prime_UTR | 45.0% | |
| CCTTATGCCAAAGCCAAACA+TGG | + | chr1_1:12383191-12383210 | None:intergenic | 45.0% | |
| !! | CCATGTTTGGCTTTGGCATA+AGG | - | chr1_1:12383188-12383207 | Msa0008600:three_prime_UTR | 45.0% |
| ATGCCAACAATGGTTGTGTG+TGG | + | chr1_1:12383225-12383244 | None:intergenic | 45.0% | |
| ! | CATTTGAAGAAGGTGTGAGG+GGG | + | chr1_1:12383403-12383422 | None:intergenic | 45.0% |
| TCCTAGCTGTGCAATCACTA+AGG | - | chr1_1:12384317-12384336 | Msa0008600:intron | 45.0% | |
| TCCTTAGTGATTGCACAGCT+AGG | + | chr1_1:12384321-12384340 | None:intergenic | 45.0% | |
| TGGAGCACATGGTGAATTCA+TGG | - | chr1_1:12384456-12384475 | Msa0008600:intron | 45.0% | |
| ACAAGTGACATAGGGTCTTG+AGG | + | chr1_1:12384586-12384605 | None:intergenic | 45.0% | |
| !! | CTGGTGTCACAAGTGACATA+GGG | + | chr1_1:12384594-12384613 | None:intergenic | 45.0% |
| !! | TCTGGTGTCACAAGTGACAT+AGG | + | chr1_1:12384595-12384614 | None:intergenic | 45.0% |
| ! | CTGGACTTCCTTTGTTGCTT+TGG | - | chr1_1:12384680-12384699 | Msa0008600:intron | 45.0% |
| GAACCATAGCAAGAGAGCAA+AGG | + | chr1_1:12384729-12384748 | None:intergenic | 45.0% | |
| !! | ATGTAATAATAAAAATTTAA+AGG | - | chr1_1:12383927-12383946 | Msa0008600:intron | 5.0% |
| !! | ATGTAATAATAAAAATTTAA+AGG | - | chr1_1:12383927-12383946 | Msa0008600:intron | 5.0% |
| CAGCCACACACAACCATTGT+TGG | - | chr1_1:12383219-12383238 | Msa0008600:exon | 50.0% | |
| CAGCCACACACAACCATTGT+TGG | - | chr1_1:12383219-12383238 | Msa0008600:exon | 50.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_1 | gene | 12382942 | 12385120 | 12382942 | ID=Msa0008600;Name=Msa0008600 |
| chr1_1 | mRNA | 12382942 | 12385120 | 12382942 | ID=Msa0008600-mRNA-1;Parent=Msa0008600;Name=Msa0008600-mRNA-1;_AED=0.00;_eAED=0.00;_QI=178|1|1|1|1|1|2|292|232 |
| chr1_1 | exon | 12382942 | 12383764 | 12382942 | ID=Msa0008600-mRNA-1:exon:4702;Parent=Msa0008600-mRNA-1 |
| chr1_1 | exon | 12384775 | 12385120 | 12384775 | ID=Msa0008600-mRNA-1:exon:4701;Parent=Msa0008600-mRNA-1 |
| chr1_1 | five_prime_UTR | 12384943 | 12385120 | 12384943 | ID=Msa0008600-mRNA-1:five_prime_utr;Parent=Msa0008600-mRNA-1 |
| chr1_1 | CDS | 12384775 | 12384942 | 12384775 | ID=Msa0008600-mRNA-1:cds;Parent=Msa0008600-mRNA-1 |
| chr1_1 | CDS | 12383234 | 12383764 | 12383234 | ID=Msa0008600-mRNA-1:cds;Parent=Msa0008600-mRNA-1 |
| chr1_1 | three_prime_UTR | 12382942 | 12383233 | 12382942 | ID=Msa0008600-mRNA-1:three_prime_utr;Parent=Msa0008600-mRNA-1 |
| Gene Sequence |
| Protein sequence |
