AlfalfaGEDB | Msa0104770

M. sativa cultivar zhongmu-4 / Msa0104770

KEGG: -
GO: GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0005575 GO:0005623 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0008150 GO:0008152 GO:0009987 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0036211 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0071704 GO:0071944 GO:0140096 GO:1901564
PFAM: PF19160.3

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0104770	RHN77890.1	93.689	206	12	1	1	206	46	250	5.06e-138	397

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0104770	sp\|O04086\|Y1105_ARATH	42.246	187	101	4	25	205	26	211	3.67e-35	134

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0104770	A0A396JI08	93.689	206	12	1	1	206	46	250	2.42e-138	397

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
Msa0010150	Msa0104770	0.811505	6.771202e-51	-8.615850e-47
Msa0011010	Msa0104770	0.878083	3.740061e-69	-8.615850e-47
Msa0011040	Msa0104770	0.874397	6.973706e-68	-8.615850e-47
Msa0013270	Msa0104770	0.837914	3.922752e-57	-8.615850e-47
Msa0017710	Msa0104770	0.813792	2.139390e-51	-8.615850e-47
Msa0024650	Msa0104770	0.817596	3.038313e-52	-8.615850e-47
Msa0025570	Msa0104770	0.835416	1.699776e-56	-8.615850e-47
Msa0045810	Msa0104770	0.808267	3.368144e-50	-8.615850e-47
Msa0046200	Msa0104770	0.807080	6.020490e-50	-8.615850e-47
Msa0048380	Msa0104770	0.881892	1.644689e-70	-8.615850e-47
Msa0062190	Msa0104770	0.834237	3.365451e-56	-8.615850e-47
Msa0063540	Msa0104770	0.808491	3.017689e-50	-8.615850e-47
Msa0073110	Msa0104770	0.832908	7.226449e-56	-8.615850e-47
Msa0078170	Msa0104770	-0.803699	3.077119e-49	-8.615850e-47
Msa0095910	Msa0104770	0.813700	2.241199e-51	-8.615850e-47
Msa0104770	Msa0106540	0.813949	1.975557e-51	-8.615850e-47
Msa0104770	Msa0107830	0.805682	1.186514e-49	-8.615850e-47
Msa0104770	Msa0120450	0.825971	3.504393e-54	-8.615850e-47
Msa0104770	Msa0121320	0.835882	1.295449e-56	-8.615850e-47
Msa0104770	Msa0127350	-0.810201	1.296574e-50	-8.615850e-47
Msa0104770	Msa0143640	0.806965	6.367470e-50	-8.615850e-47
Msa0104770	Msa0155510	0.816552	5.214160e-52	-8.615850e-47
Msa0104770	Msa0155730	0.828762	7.505749e-55	-8.615850e-47
Msa0104770	Msa0163690	0.832488	9.185687e-56	-8.615850e-47
Msa0104770	Msa0166180	0.827506	1.506816e-54	-8.615850e-47
Msa0104770	Msa0185040	0.811258	7.658997e-51	-8.615850e-47
Msa0104770	Msa0186240	0.806708	7.213353e-50	-8.615850e-47
Msa0104770	Msa0189150	-0.806565	7.734101e-50	-8.615850e-47
Msa0104770	Msa0218060	0.807843	4.146959e-50	-8.615850e-47
Msa0104770	Msa0220090	0.803925	2.761571e-49	-8.615850e-47
Msa0104770	Msa0224870	0.815010	1.151010e-51	-8.615850e-47
Msa0104770	Msa0242720	0.815333	9.753141e-52	-8.615850e-47
Msa0104770	Msa0242830	0.831809	1.352344e-55	-8.615850e-47
Msa0104770	Msa0248320	0.810326	1.218512e-50	-8.615850e-47
Msa0104770	Msa0253230	-0.811164	8.028947e-51	-8.615850e-47
Msa0104770	Msa0258010	0.808585	2.881428e-50	-8.615850e-47
Msa0104770	Msa0261020	-0.803947	2.732861e-49	-8.615850e-47
Msa0104770	Msa0265650	0.812073	5.093732e-51	-8.615850e-47
Msa0104770	Msa0267510	-0.800779	1.228069e-48	-8.615850e-47
Msa0104770	Msa0267700	0.807358	5.256763e-50	-8.615850e-47
Msa0104770	Msa0269710	0.800894	1.163273e-48	-8.615850e-47
Msa0104770	Msa0270730	-0.813992	1.932674e-51	-8.615850e-47
Msa0104770	Msa0271700	0.801401	9.161284e-49	-8.615850e-47
Msa0104770	Msa0274570	0.803410	3.532190e-49	-8.615850e-47
Msa0104770	Msa0279810	0.838021	3.682435e-57	-8.615850e-47
Msa0104770	Msa0287630	0.834211	3.417536e-56	-8.615850e-47
Msa0104770	Msa0290800	0.800229	1.589814e-48	-8.615850e-47
Msa0104770	Msa0299030	0.808523	2.970817e-50	-8.615850e-47
Msa0104770	Msa0299130	-0.800978	1.118296e-48	-8.615850e-47
Msa0104770	Msa0303900	0.816407	5.620228e-52	-8.615850e-47
Msa0104770	Msa0307630	0.824501	7.799696e-54	-8.615850e-47
Msa0104770	Msa0310190	0.808053	3.741531e-50	-8.615850e-47
Msa0104770	Msa0319220	0.843814	1.111859e-58	-8.615850e-47
Msa0104770	Msa0320170	0.808259	3.382281e-50	-8.615850e-47
Msa0104770	Msa0324810	0.829178	5.951068e-55	-8.615850e-47
Msa0104770	Msa0333770	0.829642	4.591711e-55	-8.615850e-47
Msa0104770	Msa0336550	-0.810988	8.764260e-51	-8.615850e-47
Msa0104770	Msa0340700	-0.802411	5.681947e-49	-8.615850e-47
Msa0104770	Msa0345050	0.808887	2.483053e-50	-8.615850e-47
Msa0104770	Msa0346170	0.804255	2.358535e-49	-8.615850e-47
Msa0104770	Msa0348370	0.803498	3.387605e-49	-8.615850e-47
Msa0104770	Msa0349910	0.809176	2.153442e-50	-8.615850e-47
Msa0104770	Msa0354600	0.823631	1.248256e-53	-8.615850e-47
Msa0104770	Msa0356240	0.808022	3.798657e-50	-8.615850e-47
Msa0104770	Msa0356270	0.809230	2.097318e-50	-8.615850e-47
Msa0104770	Msa0364030	-0.824565	7.533407e-54	-8.615850e-47
Msa0104770	Msa0364910	-0.815038	1.134478e-51	-8.615850e-47
Msa0104770	Msa0366510	0.806080	9.785432e-50	-8.615850e-47
Msa0104770	Msa0369990	0.804625	1.974633e-49	-8.615850e-47
Msa0104770	Msa0370620	0.809714	1.650415e-50	-8.615850e-47
Msa0104770	Msa0374470	0.834986	2.182673e-56	-8.615850e-47
Msa0104770	Msa0374600	0.832574	8.749309e-56	-8.615850e-47
Msa0104770	Msa0382020	-0.804647	1.953438e-49	-8.615850e-47
Msa0104770	Msa0386910	0.801296	9.629373e-49	-8.615850e-47
Msa0104770	Msa0390160	0.812945	3.283051e-51	-8.615850e-47
Msa0104770	Msa0390170	0.806902	6.564532e-50	-8.615850e-47
Msa0104770	Msa0390200	0.804325	2.279993e-49	-8.615850e-47
Msa0104770	Msa0396790	0.801963	7.026526e-49	-8.615850e-47
Msa0104770	Msa0400010	0.801043	1.084529e-48	-8.615850e-47
Msa0104770	Msa0403740	-0.822673	2.088410e-53	-8.615850e-47
Msa0104770	Msa0405200	0.823652	1.234543e-53	-8.615850e-47
Msa0104770	Msa0412580	-0.803621	3.194269e-49	-8.615850e-47
Msa0104770	Msa0417400	0.806990	6.288277e-50	-8.615850e-47
Msa0104770	Msa0423630	0.813785	2.147192e-51	-8.615850e-47
Msa0104770	Msa0427230	-0.804884	1.743099e-49	-8.615850e-47
Msa0104770	Msa0428720	-0.803478	3.419355e-49	-8.615850e-47
Msa0104770	Msa0434400	0.800593	1.339948e-48	-8.615850e-47
Msa0104770	Msa0449490	0.812366	4.395430e-51	-8.615850e-47
Msa0104770	Msa0449500	0.815448	9.196523e-52	-8.615850e-47
Msa0104770	Msa0454770	0.822053	2.910093e-53	-8.615850e-47
Msa0104770	Msa0456450	-0.818316	2.088772e-52	-8.615850e-47
Msa0104770	Msa0457070	-0.801980	6.970790e-49	-8.615850e-47
Msa0104770	Msa0470420	0.814520	1.477594e-51	-8.615850e-47
Msa0104770	Msa0473740	-0.806429	8.261093e-50	-8.615850e-47
Msa0104770	Msa0474660	-0.807422	5.093559e-50	-8.615850e-47
Msa0104770	Msa0478080	0.804161	2.466568e-49	-8.615850e-47
Msa0104770	Msa0487110	0.805531	1.276425e-49	-8.615850e-47
Msa0104770	Msa0490060	0.805321	1.412658e-49	-8.615850e-47
Msa0104770	Msa0490100	0.845373	4.230030e-59	-8.615850e-47
Msa0104770	Msa0491780	0.803335	3.661479e-49	-8.615850e-47
Msa0104770	Msa0492330	-0.809231	2.095954e-50	-8.615850e-47
Msa0104770	Msa0493870	0.817838	2.679643e-52	-8.615850e-47
Msa0104770	Msa0496070	0.808148	3.570217e-50	-8.615850e-47
Msa0104770	Msa0497680	0.816204	6.238032e-52	-8.615850e-47
Msa0104770	Msa0501080	0.806089	9.745250e-50	-8.615850e-47
Msa0104770	Msa0502970	0.805911	1.061980e-49	-8.615850e-47
Msa0104770	Msa0510870	0.815550	8.728743e-52	-8.615850e-47
Msa0104770	Msa0522140	0.807283	5.452586e-50	-8.615850e-47
Msa0104770	Msa0522170	0.810562	1.083687e-50	-8.615850e-47
Msa0104770	Msa0523720	0.808023	3.796216e-50	-8.615850e-47
Msa0104770	Msa0531050	0.819552	1.093707e-52	-8.615850e-47
Msa0104770	Msa0535570	0.804755	1.854617e-49	-8.615850e-47
Msa0104770	Msa0540640	0.818073	2.371383e-52	-8.615850e-47
Msa0104770	Msa0546590	0.809842	1.549084e-50	-8.615850e-47
Msa0104770	Msa0548790	0.836019	1.195506e-56	-8.615850e-47
Msa0104770	Msa0549170	0.803876	2.828205e-49	-8.615850e-47
Msa0104770	Msa0549960	0.809615	1.733831e-50	-8.615850e-47
Msa0104770	Msa0550980	-0.803751	3.002629e-49	-8.615850e-47
Msa0104770	Msa0561830	0.845724	3.396865e-59	-8.615850e-47
Msa0104770	Msa0565180	0.825289	5.084503e-54	-8.615850e-47
Msa0104770	Msa0565700	0.817523	3.154654e-52	-8.615850e-47
Msa0104770	Msa0567330	0.830050	3.652237e-55	-8.615850e-47
Msa0104770	Msa0567570	0.833485	5.191378e-56	-8.615850e-47
Msa0104770	Msa0576320	0.826176	3.132538e-54	-8.615850e-47
Msa0104770	Msa0580410	-0.815112	1.092235e-51	-8.615850e-47
Msa0104770	Msa0580840	0.800866	1.178774e-48	-8.615850e-47
Msa0104770	Msa0580890	-0.810045	1.401333e-50	-8.615850e-47
Msa0104770	Msa0583270	-0.811657	6.273448e-51	-8.615850e-47
Msa0104770	Msa0587730	0.823491	1.346475e-53	-8.615850e-47
Msa0104770	Msa0588040	0.806317	8.725212e-50	-8.615850e-47
Msa0104770	Msa0596600	0.810404	1.172520e-50	-8.615850e-47
Msa0104770	Msa0597180	0.811402	7.128758e-51	-8.615850e-47
Msa0104770	Msa0597820	0.801256	9.809695e-49	-8.615850e-47
Msa0104770	Msa0604200	0.804437	2.160720e-49	-8.615850e-47
Msa0104770	Msa0614960	0.851193	1.040633e-60	-8.615850e-47
Msa0104770	Msa0622800	-0.808146	3.575215e-50	-8.615850e-47
Msa0104770	Msa0628200	0.833005	6.834507e-56	-8.615850e-47
Msa0104770	Msa0629160	0.817825	2.697908e-52	-8.615850e-47
Msa0104770	Msa0639410	0.809526	1.811423e-50	-8.615850e-47
Msa0104770	Msa0643230	0.803352	3.631490e-49	-8.615850e-47
Msa0104770	Msa0646430	0.808259	3.381699e-50	-8.615850e-47
Msa0104770	Msa0647300	0.816408	5.617566e-52	-8.615850e-47
Msa0104770	Msa0651820	0.812944	3.285974e-51	-8.615850e-47
Msa0104770	Msa0652590	0.828796	7.366129e-55	-8.615850e-47
Msa0104770	Msa0652600	0.815535	8.794287e-52	-8.615850e-47
Msa0104770	Msa0655370	0.843698	1.194278e-58	-8.615850e-47
Msa0104770	Msa0657340	0.826772	2.258419e-54	-8.615850e-47
Msa0104770	Msa0680460	0.835453	1.663494e-56	-8.615850e-47
Msa0104770	Msa0682110	0.822385	2.436703e-53	-8.615850e-47
Msa0104770	Msa0682160	0.816644	4.971628e-52	-8.615850e-47
Msa0104770	Msa0686830	0.817650	2.953996e-52	-8.615850e-47
Msa0104770	Msa0689840	0.820459	6.784747e-53	-8.615850e-47
Msa0104770	Msa0698280	0.807192	5.698945e-50	-8.615850e-47
Msa0104770	Msa0699170	0.855627	5.555465e-62	-8.615850e-47
Msa0104770	Msa0701430	0.807488	4.933686e-50	-8.615850e-47
Msa0104770	Msa0715040	0.806226	9.115972e-50	-8.615850e-47
Msa0104770	Msa0715250	0.800370	1.487616e-48	-8.615850e-47
Msa0104770	Msa0716980	0.804758	1.852675e-49	-8.615850e-47
Msa0104770	Msa0738680	0.814070	1.857646e-51	-8.615850e-47
Msa0104770	Msa0750830	0.809206	2.122253e-50	-8.615850e-47
Msa0104770	Msa0758880	-0.812190	4.802750e-51	-8.615850e-47
Msa0104770	Msa0766170	0.844398	7.749901e-59	-8.615850e-47
Msa0104770	Msa0766910	-0.800515	1.390042e-48	-8.615850e-47
Msa0104770	Msa0792410	0.820876	5.439358e-53	-8.615850e-47
Msa0104770	Msa0793270	0.801602	8.331677e-49	-8.615850e-47
Msa0104770	Msa0794200	0.805561	1.257664e-49	-8.615850e-47
Msa0104770	Msa0795320	0.806702	7.233713e-50	-8.615850e-47
Msa0104770	Msa0795910	-0.816069	6.685590e-52	-8.615850e-47
Msa0104770	Msa0798840	0.813326	2.709172e-51	-8.615850e-47
Msa0104770	Msa0801920	-0.820154	7.969891e-53	-8.615850e-47
Msa0104770	Msa0802600	0.822495	2.297136e-53	-8.615850e-47
Msa0104770	Msa0804170	0.801103	1.054416e-48	-8.615850e-47
Msa0104770	Msa0806930	0.803809	2.919322e-49	-8.615850e-47
Msa0104770	Msa0818220	0.800312	1.528603e-48	-8.615850e-47
Msa0104770	Msa0819150	0.806466	8.115456e-50	-8.615850e-47
Msa0104770	Msa0829250	-0.816809	4.566352e-52	-8.615850e-47
Msa0104770	Msa0829990	0.813842	2.085213e-51	-8.615850e-47
Msa0104770	Msa0831310	0.808024	3.794774e-50	-8.615850e-47
Msa0104770	Msa0831890	0.810637	1.044197e-50	-8.615850e-47
Msa0104770	Msa0833360	-0.810750	9.867241e-51	-8.615850e-47
Msa0104770	Msa0838120	-0.820726	5.891358e-53	-8.615850e-47
Msa0104770	Msa0838210	0.814604	1.415388e-51	-8.615850e-47
Msa0104770	Msa0855260	0.820243	7.604750e-53	-8.615850e-47
Msa0104770	Msa0873880	0.817622	2.997330e-52	-8.615850e-47
Msa0104770	Msa0873940	0.803858	2.852828e-49	-8.615850e-47
Msa0104770	Msa0880910	0.808988	2.362918e-50	-8.615850e-47
Msa0104770	Msa0896920	0.821585	3.734170e-53	-8.615850e-47
Msa0104770	Msa0898970	0.804325	2.279995e-49	-8.615850e-47
Msa0104770	Msa0906680	0.809502	1.833485e-50	-8.615850e-47
Msa0104770	Msa0910170	0.815964	7.058452e-52	-8.615850e-47
Msa0104770	Msa0921790	0.808247	3.401061e-50	-8.615850e-47
Msa0104770	Msa0941420	-0.801739	7.811223e-49	-8.615850e-47
Msa0104770	Msa0946010	0.809951	1.467824e-50	-8.615850e-47
Msa0104770	Msa0959220	0.815808	7.647934e-52	-8.615850e-47
Msa0104770	Msa0960580	0.811775	5.914183e-51	-8.615850e-47
Msa0104770	Msa0964400	-0.815740	7.918830e-52	-8.615850e-47
Msa0104770	Msa0964510	0.800720	1.262326e-48	-8.615850e-47
Msa0104770	Msa0965950	0.810900	9.158403e-51	-8.615850e-47
Msa0104770	Msa0967210	0.804070	2.576876e-49	-8.615850e-47
Msa0104770	Msa0967780	0.801512	8.694519e-49	-8.615850e-47
Msa0104770	Msa0970270	0.828918	6.883007e-55	-8.615850e-47
Msa0104770	Msa0973010	-0.814838	1.256345e-51	-8.615850e-47
Msa0104770	Msa0975950	0.820084	8.266560e-53	-8.615850e-47
Msa0104770	Msa0976400	0.800843	1.191371e-48	-8.615850e-47
Msa0104770	Msa0984230	-0.805756	1.144909e-49	-8.615850e-47
Msa0104770	Msa1002550	-0.804368	2.233760e-49	-8.615850e-47
Msa0104770	Msa1024420	0.814659	1.376558e-51	-8.615850e-47
Msa0104770	Msa1024480	0.820201	7.771428e-53	-8.615850e-47
Msa0104770	Msa1029860	0.825648	4.178950e-54	-8.615850e-47
Msa0104770	Msa1030210	0.809347	1.979087e-50	-8.615850e-47
Msa0104770	Msa1030320	0.824038	1.002287e-53	-8.615850e-47
Msa0104770	Msa1035050	0.836429	9.408417e-57	-8.615850e-47
Msa0104770	Msa1037360	0.810306	1.230861e-50	-8.615850e-47
Msa0104770	Msa1041250	0.827009	1.982142e-54	-8.615850e-47
Msa0104770	Msa1049400	0.814929	1.199615e-51	-8.615850e-47
Msa0104770	Msa1056890	0.828551	8.443143e-55	-8.615850e-47
Msa0104770	Msa1062060	0.805970	1.031896e-49	-8.615850e-47
Msa0104770	Msa1068730	0.802120	6.523496e-49	-8.615850e-47
Msa0104770	Msa1068780	0.800643	1.309135e-48	-8.615850e-47
Msa0104770	Msa1068950	0.802572	5.264064e-49	-8.615850e-47
Msa0104770	Msa1069250	0.828427	9.043969e-55	-8.615850e-47
Msa0104770	Msa1075090	0.863635	2.163021e-64	-8.615850e-47
Msa0104770	Msa1078120	-0.824019	1.012624e-53	-8.615850e-47
Msa0104770	Msa1082080	0.801768	7.705063e-49	-8.615850e-47
Msa0104770	Msa1087210	0.806154	9.440067e-50	-8.615850e-47
Msa0104770	Msa1094810	0.801881	7.304031e-49	-8.615850e-47
Msa0104770	Msa1095590	0.800107	1.683317e-48	-8.615850e-47
Msa0104770	Msa1099650	0.802085	6.631050e-49	-8.615850e-47
Msa0104770	Msa1100330	0.820409	6.963339e-53	-8.615850e-47
Msa0104770	Msa1102410	-0.807970	3.895832e-50	-8.615850e-47
Msa0104770	Msa1103450	0.824690	7.042172e-54	-8.615850e-47
Msa0104770	Msa1107220	0.821514	3.877061e-53	-8.615850e-47
Msa0104770	Msa1107250	0.833392	5.477127e-56	-8.615850e-47
Msa0104770	Msa1108560	0.858736	6.713017e-63	-8.615850e-47
Msa0104770	Msa1110900	0.806589	7.644837e-50	-8.615850e-47
Msa0104770	Msa1115980	0.838521	2.736813e-57	-8.615850e-47
Msa0104770	Msa1123000	0.814543	1.460032e-51	-8.615850e-47
Msa0104770	Msa1124220	0.836834	7.415511e-57	-8.615850e-47
Msa0104770	Msa1130150	-0.807062	6.072070e-50	-8.615850e-47
Msa0104770	Msa1131120	0.816794	4.601541e-52	-8.615850e-47
Msa0104770	Msa1132880	-0.818199	2.220016e-52	-8.615850e-47
Msa0104770	Msa1136630	0.818952	1.498572e-52	-8.615850e-47
Msa0104770	Msa1137750	0.806372	8.492023e-50	-8.615850e-47
Msa0104770	Msa1143250	0.801681	8.028253e-49	-8.615850e-47
Msa0104770	Msa1146980	0.800618	1.324599e-48	-8.615850e-47
Msa0104770	Msa1147010	0.844884	5.734919e-59	-8.615850e-47
Msa0104770	Msa1150760	0.814304	1.649216e-51	-8.615850e-47
Msa0104770	Msa1152330	0.820301	7.372102e-53	-8.615850e-47
Msa0104770	Msa1155610	0.813787	2.144286e-51	-8.615850e-47
Msa0104770	Msa1156730	0.804657	1.944778e-49	-8.615850e-47
Msa0104770	Msa1156740	0.804581	2.016807e-49	-8.615850e-47
Msa0104770	Msa1157210	0.814701	1.347330e-51	-8.615850e-47
Msa0104770	Msa1162430	0.824404	8.219341e-54	-8.615850e-47
Msa0104770	Msa1165460	0.808055	3.737033e-50	-8.615850e-47
Msa0104770	Msa1174280	0.807190	5.703674e-50	-8.615850e-47
Msa0104770	Msa1181090	0.821630	3.645466e-53	-8.615850e-47
Msa0104770	Msa1185270	0.810176	1.313003e-50	-8.615850e-47
Msa0104770	Msa1188080	0.802343	5.868186e-49	-8.615850e-47
Msa0104770	Msa1191530	-0.813031	3.143596e-51	-8.615850e-47
Msa0104770	Msa1199540	-0.809845	1.547226e-50	-8.615850e-47
Msa0104770	Msa1202110	0.823973	1.037941e-53	-8.615850e-47
Msa0104770	Msa1205360	0.809585	1.759836e-50	-8.615850e-47
Msa0104770	Msa1212150	-0.804073	2.573691e-49	-8.615850e-47
Msa0104770	Msa1223960	0.850733	1.402802e-60	-8.615850e-47
Msa0104770	Msa1223990	0.860944	1.450579e-63	-8.615850e-47
Msa0104770	Msa1239190	0.806017	1.008909e-49	-8.615850e-47
Msa0104770	Msa1239210	0.814279	1.670440e-51	-8.615850e-47
Msa0104770	Msa1250280	0.805065	1.598093e-49	-8.615850e-47
Msa0104770	Msa1254870	0.822937	1.813017e-53	-8.615850e-47
Msa0104770	Msa1263110	0.862150	6.214205e-64	-8.615850e-47
Msa0104770	Msa1263120	0.854206	1.436473e-61	-8.615850e-47
Msa0104770	Msa1269200	0.809365	1.961483e-50	-8.615850e-47
Msa0104770	Msa1273320	0.818306	2.100279e-52	-8.615850e-47
Msa0104770	Msa1278080	-0.805357	1.388147e-49	-8.615850e-47
Msa0104770	Msa1279200	-0.805954	1.039927e-49	-8.615850e-47
Msa0104770	Msa1279750	0.805575	1.249684e-49	-8.615850e-47
Msa0104770	Msa1284020	0.829895	3.985628e-55	-8.615850e-47
Msa0104770	Msa1291070	-0.801352	9.376077e-49	-8.615850e-47
Msa0104770	Msa1294770	0.803411	3.531155e-49	-8.615850e-47
Msa0104770	Msa1297220	-0.802343	5.869546e-49	-8.615850e-47
Msa0104770	Msa1317740	0.811722	6.072568e-51	-8.615850e-47
Msa0104770	Msa1320160	0.818825	1.601307e-52	-8.615850e-47
Msa0104770	Msa1322500	0.839342	1.678144e-57	-8.615850e-47
Msa0104770	Msa1328430	0.823125	1.639025e-53	-8.615850e-47
Msa0104770	Msa1328680	-0.807880	4.072514e-50	-8.615850e-47
Msa0104770	Msa1340440	0.813098	3.039144e-51	-8.615850e-47
Msa0104770	Msa1341710	-0.809058	2.282107e-50	-8.615850e-47
Msa0104770	Msa1342360	-0.817825	2.697197e-52	-8.615850e-47
Msa0104770	Msa1357570	0.813432	2.566724e-51	-8.615850e-47
Msa0104770	Msa1357840	0.816385	5.683397e-52	-8.615850e-47
Msa0104770	Msa1359770	0.827763	1.307447e-54	-8.615850e-47
Msa0104770	Msa1361980	0.805729	1.159958e-49	-8.615850e-47
Msa0104770	Msa1366480	0.824475	7.910046e-54	-8.615850e-47
Msa0104770	Msa1368420	0.800509	1.394163e-48	-8.615850e-47
Msa0104770	Msa1380740	0.810311	1.227559e-50	-8.615850e-47
Msa0104770	Msa1386910	-0.803381	3.581343e-49	-8.615850e-47
Msa0104770	Msa1398120	0.803577	3.262942e-49	-8.615850e-47
Msa0104770	Msa1405830	0.814275	1.673982e-51	-8.615850e-47
Msa0104770	Msa1407810	0.830705	2.526882e-55	-8.615850e-47
Msa0104770	Msa1408230	-0.808699	2.724292e-50	-8.615850e-47
Msa0104770	Msa1413020	0.800727	1.258125e-48	-8.615850e-47
Msa0104770	Msa1417220	0.805852	1.092598e-49	-8.615850e-47
Msa0104770	Msa1433360	0.813101	3.035208e-51	-8.615850e-47
Msa0104770	Msa1437780	0.831609	1.514970e-55	-8.615850e-47
Msa0104770	Msa1455360	0.824373	8.359661e-54	-8.615850e-47
Msa0104770	Msa1458270	0.835037	2.118791e-56	-8.615850e-47
Msa0104770	Msa1459920	0.809746	1.624706e-50	-8.615850e-47
Msa0104770	Msa1461660	0.804875	1.751157e-49	-8.615850e-47
Msa0104770	Msa1462610	0.823237	1.543325e-53	-8.615850e-47
Msa0104770	Msa1464140	0.804281	2.328722e-49	-8.615850e-47

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0104770	MtrunA17_Chr1g0159601	93.689	206	12	1	1	206	46	250	4.65e-142	397
Msa0104770	MtrunA17_Chr1g0159611	79.412	136	28	0	1	136	46	181	4.85e-75	236
Msa0104770	MtrunA17_Chr2g0277731	43.439	221	109	6	6	216	6	220	7.67e-50	171
Msa0104770	MtrunA17_Chr8g0380681	45.370	216	99	5	8	205	5	219	1.04e-49	173
Msa0104770	MtrunA17_Chr8g0380681	38.000	200	111	6	18	205	691	889	1.71e-35	132
Msa0104770	MtrunA17_Chr4g0039131	45.000	120	63	2	86	203	1	119	7.28e-29	106

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0104770	AT1G11050.1	42.246	187	101	4	25	205	26	211	3.74e-36	134

Find 34 sgRNAs with CRISPR-Local

Find 41 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
CAATCTCTTCTTAGTCTCTT+TGG	0.194083	1_3:-12927376	Msa0104770:CDS
GTTGGTATTGTGAATCATTT+TGG	0.240330	1_3:-12926977	Msa0104770:CDS
GAAAGAGTGAAGTTTCTTTC+AGG	0.244676	1_3:+12927335	None:intergenic
CAGAAGGAGTAGCTATGATA+AGG	0.380662	1_3:+12927497	None:intergenic
TTGTAAAGGTGATTTGAAAT+CGG	0.388227	1_3:-12927110	Msa0104770:CDS
CAACAATGTTGTGTGTCAAT+TGG	0.393976	1_3:+12927400	None:intergenic
TGTGTCAATTGGGTCTCTGC+AGG	0.430262	1_3:+12927411	None:intergenic
CTTCTTAGTCTCTTTGGCAT+AGG	0.437265	1_3:-12927370	Msa0104770:CDS
CTTTACAAGAAGTGTCTAAA+GGG	0.447705	1_3:+12927125	None:intergenic
TAAGGGTGAAGAGGAGGAGA+AGG	0.460180	1_3:+12927515	None:intergenic
CCTTTAGACACTTCTTGTAA+AGG	0.468879	1_3:-12927124	Msa0104770:CDS
CTAGTTGTATACTTGGTAGT+TGG	0.472192	1_3:-12926934	Msa0104770:CDS
AACAATGTTGTGTGTCAATT+GGG	0.477153	1_3:+12927401	None:intergenic
TGCAGCACGTGCACTAATGC+TGG	0.478276	1_3:-12927079	Msa0104770:CDS
GTATCACAAACATCAAAGAT+TGG	0.490764	1_3:-12927171	Msa0104770:CDS
TATTGAGAGTAGATAGAAGC+GGG	0.491909	1_3:+12926908	None:intergenic
CTATGATAAGGGTGAAGAGG+AGG	0.492847	1_3:+12927509	None:intergenic
CCTTTACAAGAAGTGTCTAA+AGG	0.505136	1_3:+12927124	None:intergenic
TAGCTATGATAAGGGTGAAG+AGG	0.511716	1_3:+12927506	None:intergenic
GCTACAGCTAGTTGTATACT+TGG	0.511927	1_3:-12926941	Msa0104770:CDS
AGAAGGAGTAGCTATGATAA+GGG	0.514017	1_3:+12927498	None:intergenic
TTCTGCAGTATCATGTCCTA+TGG	0.534711	1_3:-12927473	Msa0104770:CDS
AAGAAGGGACTAACGAAGGT+TGG	0.536160	1_3:+12927242	None:intergenic
TGACAAATTGAGTTGAGTTG+TGG	0.541730	1_3:+12927215	None:intergenic
TCAACATAGCTGAGATCCAT+AGG	0.544235	1_3:+12927457	None:intergenic
GGTTGATGTGTCCCATGAAA+AGG	0.549361	1_3:+12927432	None:intergenic
ACAAACAACTCAAGCTGCGC+AGG	0.551790	1_3:-12927193	Msa0104770:CDS
GTTGAGTTGTGGAAACAAGA+AGG	0.556459	1_3:+12927226	None:intergenic
AGTATACAACTAGCTGTAGC+AGG	0.563837	1_3:+12926944	None:intergenic
CTAGCTGTAGCAGGATCTGT+AGG	0.582604	1_3:+12926953	None:intergenic
CATGATACTGCAGAAGCAGA+AGG	0.601540	1_3:+12927481	None:intergenic
TTGAGTTGTGGAAACAAGAA+GGG	0.613460	1_3:+12927227	None:intergenic
ATATTGAGAGTAGATAGAAG+CGG	0.644838	1_3:+12926907	None:intergenic
AAACAAGAAGGGACTAACGA+AGG	0.740560	1_3:+12927238	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!!	ATTTTAAAGTGTTTTTATTA+GGG	+	chr1_3:12927119-12927138	None:intergenic	10.0%
!!!	GATTTTAAAGTGTTTTTATT+AGG	+	chr1_3:12927120-12927139	None:intergenic	15.0%
!!	TTGTAAAGGTGATTTGAAAT+CGG	-	chr1_3:12927314-12927333	Msa0104770:CDS	25.0%
!!!	TTTTCAGTTTTATATGCTGT+TGG	-	chr1_3:12927429-12927448	Msa0104770:CDS	25.0%
	AACAATGTTGTGTGTCAATT+GGG	+	chr1_3:12927026-12927045	None:intergenic	30.0%
	GTATCACAAACATCAAAGAT+TGG	-	chr1_3:12927253-12927272	Msa0104770:CDS	30.0%
	AAAGATTGGAAGCAAAAAGT+TGG	-	chr1_3:12927267-12927286	Msa0104770:CDS	30.0%
!!	CTTTACAAGAAGTGTCTAAA+GGG	+	chr1_3:12927302-12927321	None:intergenic	30.0%
!!!	AAGCACTTAGTTGCATTTTT+TGG	+	chr1_3:12927405-12927424	None:intergenic	30.0%
!	GTTGGTATTGTGAATCATTT+TGG	-	chr1_3:12927447-12927466	Msa0104770:CDS	30.0%
	ATATTGAGAGTAGATAGAAG+CGG	+	chr1_3:12927520-12927539	None:intergenic	30.0%
	AGAAGGAGTAGCTATGATAA+GGG	+	chr1_3:12926929-12926948	None:intergenic	35.0%
!	CTATGTTGAGACCTTTTCAT+GGG	-	chr1_3:12926981-12927000	Msa0104770:CDS	35.0%
	CAACAATGTTGTGTGTCAAT+TGG	+	chr1_3:12927027-12927046	None:intergenic	35.0%
	CAATCTCTTCTTAGTCTCTT+TGG	-	chr1_3:12927048-12927067	Msa0104770:CDS	35.0%
	GAAAGAGTGAAGTTTCTTTC+AGG	+	chr1_3:12927092-12927111	None:intergenic	35.0%
!	TTGAGTTGTGGAAACAAGAA+GGG	+	chr1_3:12927200-12927219	None:intergenic	35.0%
!!	TGACAAATTGAGTTGAGTTG+TGG	+	chr1_3:12927212-12927231	None:intergenic	35.0%
!!	CCTTTACAAGAAGTGTCTAA+AGG	+	chr1_3:12927303-12927322	None:intergenic	35.0%
	CCTTTAGACACTTCTTGTAA+AGG	-	chr1_3:12927300-12927319	Msa0104770:CDS	35.0%
!	CTAGTTGTATACTTGGTAGT+TGG	-	chr1_3:12927490-12927509	Msa0104770:CDS	35.0%
	TATTGAGAGTAGATAGAAGC+GGG	+	chr1_3:12927519-12927538	None:intergenic	35.0%
	TAGCTATGATAAGGGTGAAG+AGG	+	chr1_3:12926921-12926940	None:intergenic	40.0%
	CAGAAGGAGTAGCTATGATA+AGG	+	chr1_3:12926930-12926949	None:intergenic	40.0%
	TTCTGCAGTATCATGTCCTA+TGG	-	chr1_3:12926951-12926970	Msa0104770:CDS	40.0%
	TCAACATAGCTGAGATCCAT+AGG	+	chr1_3:12926970-12926989	None:intergenic	40.0%
!	GCTATGTTGAGACCTTTTCA+TGG	-	chr1_3:12926980-12926999	Msa0104770:CDS	40.0%
	CTTCTTAGTCTCTTTGGCAT+AGG	-	chr1_3:12927054-12927073	Msa0104770:CDS	40.0%
	AAACAAGAAGGGACTAACGA+AGG	+	chr1_3:12927189-12927208	None:intergenic	40.0%
!	GTTGAGTTGTGGAAACAAGA+AGG	+	chr1_3:12927201-12927220	None:intergenic	40.0%
	AGTATACAACTAGCTGTAGC+AGG	+	chr1_3:12927483-12927502	None:intergenic	40.0%
	GCTACAGCTAGTTGTATACT+TGG	-	chr1_3:12927483-12927502	Msa0104770:CDS	40.0%
	CTATGATAAGGGTGAAGAGG+AGG	+	chr1_3:12926918-12926937	None:intergenic	45.0%
	CATGATACTGCAGAAGCAGA+AGG	+	chr1_3:12926946-12926965	None:intergenic	45.0%
!	GGTTGATGTGTCCCATGAAA+AGG	+	chr1_3:12926995-12927014	None:intergenic	45.0%
	AAGAAGGGACTAACGAAGGT+TGG	+	chr1_3:12927185-12927204	None:intergenic	45.0%
	TAAGGGTGAAGAGGAGGAGA+AGG	+	chr1_3:12926912-12926931	None:intergenic	50.0%
	TGTGTCAATTGGGTCTCTGC+AGG	+	chr1_3:12927016-12927035	None:intergenic	50.0%
	ACAAACAACTCAAGCTGCGC+AGG	-	chr1_3:12927231-12927250	Msa0104770:CDS	50.0%
	CTAGCTGTAGCAGGATCTGT+AGG	+	chr1_3:12927474-12927493	None:intergenic	50.0%
	TGCAGCACGTGCACTAATGC+TGG	-	chr1_3:12927345-12927364	Msa0104770:CDS	55.0%

Chromosome	Type	Strat	End	Strand	Name
chr1_3	gene	12926889	12927557	12926889	ID=Msa0104770;Name=Msa0104770
chr1_3	mRNA	12926889	12927557	12926889	ID=Msa0104770-mRNA-1;Parent=Msa0104770;Name=Msa0104770-mRNA-1;_AED=0.38;_eAED=0.38;_QI=0\|-1\|0\|1\|-1\|1\|1\|0\|222
chr1_3	exon	12926889	12927557	12926889	ID=Msa0104770-mRNA-1:exon:5072;Parent=Msa0104770-mRNA-1
chr1_3	CDS	12926889	12927557	12926889	ID=Msa0104770-mRNA-1:cds;Parent=Msa0104770-mRNA-1

Gene Sequence

>Msa0104770

ATGGATAACAAAGCAATGTTCCTTCTCCTCCTCTTCACCCTTATCATAGCTACTCCTTCTGCTTCTGCAGTATCATGTCCTATGGATCTCAGCTATGTTGAGACCTTTTCATGGGACACATCAACCTGCAGAGACCCAATTGACACACAACATTGTTGTCAATCTCTTCTTAGTCTCTTTGGCATAGGACTTGCAAAACACCTGAAAGAAACTTCACTCTTTCAACTCCCTAATAAAAACACTTTAAAATCTTGCTTACAAGATTTCAAACTCAAACTTTCATGCTTAAAGATCCAACCTTCGTTAGTCCCTTCTTGTTTCCACAACTCAACTCAATTTGTCACAAACAACTCAAGCTGCGCAGGTATCACAAACATCAAAGATTGGAAGCAAAAAGTTGGTAGAATTAGCCCTTTAGACACTTCTTGTAAAGGTGATTTGAAATCGGACACTAGTTGCAGCACGTGCACTAATGCTGGTTTCAAAGTCACTTCTCAGCTTACAAGTATTGATCCAAAAAATGCAACTAAGTGCTTTTTCTTTTCAGTTTTATATGCTGTTGGTATTGTGAATCATTTTGGTCCTACAGATCCTGCTACAGCTAGTTGTATACTTGGTAGTTGGTATCCCGCTTCTATCTACTCTCAATATAACAAAACAACATACTAG

Protein sequence

>Msa0104770

MDNKAMFLLLLFTLIIATPSASAVSCPMDLSYVETFSWDTSTCRDPIDTQHCCQSLLSLFGIGLAKHLKETSLFQLPNKNTLKSCLQDFKLKLSCLKIQPSLVPSCFHNSTQFVTNNSSCAGITNIKDWKQKVGRISPLDTSCKGDLKSDTSCSTCTNAGFKVTSQLTSIDPKNATKCFFFSVLYAVGIVNHFGPTDPATASCILGSWYPASIYSQYNKTTY*