Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene037539.t1 | AES86963.2 | 77.1 | 458 | 71 | 4 | 39 | 470 | 21 | 470 | 9.90E-186 | 659.8 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene037539.t1 | G7JQ87 | 77.1 | 458 | 71 | 4 | 39 | 470 | 21 | 470 | 7.2e-186 | 659.8 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene037539.t1 | MTR_4g017550 | 76.050 | 476 | 78 | 5 | 23 | 470 | 3 | 470 | 0.0 | 697 |
MS.gene037539.t1 | MTR_4g017410 | 67.532 | 539 | 108 | 10 | 1 | 505 | 1 | 506 | 0.0 | 661 |
MS.gene037539.t1 | MTR_4g017830 | 61.509 | 517 | 150 | 10 | 3 | 482 | 6 | 510 | 0.0 | 584 |
MS.gene037539.t1 | MTR_4g017440 | 63.178 | 516 | 136 | 10 | 3 | 479 | 8 | 508 | 0.0 | 582 |
MS.gene037539.t1 | MTR_4g017470 | 61.059 | 529 | 127 | 10 | 1 | 491 | 1 | 488 | 0.0 | 561 |
MS.gene037539.t1 | MTR_4g017610 | 59.879 | 496 | 141 | 10 | 4 | 469 | 8 | 475 | 0.0 | 548 |
MS.gene037539.t1 | MTR_4g019340 | 60.120 | 499 | 124 | 11 | 8 | 463 | 37 | 503 | 0.0 | 530 |
MS.gene037539.t1 | MTR_4g019310 | 39.924 | 526 | 244 | 17 | 1 | 481 | 1 | 499 | 4.40e-98 | 305 |
MS.gene037539.t1 | MTR_7g066350 | 33.071 | 508 | 238 | 13 | 1 | 469 | 1 | 445 | 1.37e-69 | 230 |
MS.gene037539.t1 | MTR_7g066570 | 33.837 | 529 | 274 | 19 | 3 | 490 | 8 | 501 | 1.11e-67 | 228 |
MS.gene037539.t1 | MTR_7g066260 | 34.113 | 513 | 231 | 17 | 3 | 470 | 9 | 459 | 1.77e-66 | 223 |
MS.gene037539.t1 | MTR_7g066410 | 32.150 | 535 | 261 | 16 | 10 | 474 | 11 | 513 | 1.77e-65 | 221 |
MS.gene037539.t1 | MTR_7g066340 | 30.427 | 539 | 266 | 13 | 2 | 499 | 5 | 475 | 2.16e-65 | 219 |
MS.gene037539.t1 | MTR_7g012680 | 33.806 | 494 | 260 | 18 | 3 | 479 | 8 | 451 | 3.22e-62 | 210 |
MS.gene037539.t1 | MTR_7g058710 | 29.379 | 531 | 275 | 15 | 1 | 479 | 1 | 483 | 2.31e-61 | 209 |
MS.gene037539.t1 | MTR_7g063900 | 33.526 | 519 | 264 | 16 | 1 | 474 | 1 | 483 | 7.29e-59 | 202 |
MS.gene037539.t1 | MTR_7g066430 | 31.931 | 523 | 277 | 17 | 10 | 485 | 5 | 495 | 2.10e-57 | 199 |
MS.gene037539.t1 | MTR_7g066360 | 33.829 | 538 | 248 | 23 | 3 | 499 | 8 | 478 | 1.32e-56 | 196 |
MS.gene037539.t1 | MTR_7g066580 | 32.172 | 488 | 255 | 17 | 15 | 473 | 1 | 441 | 4.06e-54 | 189 |
MS.gene037539.t1 | MTR_1g041315 | 28.543 | 501 | 251 | 17 | 5 | 457 | 10 | 451 | 6.63e-54 | 189 |
MS.gene037539.t1 | MTR_7g066400 | 29.878 | 492 | 242 | 16 | 10 | 469 | 13 | 433 | 3.37e-52 | 183 |
MS.gene037539.t1 | MTR_7g063660 | 30.948 | 517 | 279 | 16 | 1 | 479 | 1 | 477 | 7.32e-52 | 183 |
MS.gene037539.t1 | MTR_7g062280 | 30.769 | 533 | 270 | 14 | 2 | 479 | 3 | 491 | 1.22e-50 | 180 |
MS.gene037539.t1 | MTR_7g066310 | 29.688 | 512 | 228 | 16 | 8 | 499 | 6 | 405 | 2.42e-50 | 177 |
MS.gene037539.t1 | MTR_7g062300 | 30.333 | 511 | 271 | 14 | 3 | 472 | 6 | 472 | 1.94e-49 | 176 |
MS.gene037539.t1 | MTR_7g063890 | 31.862 | 521 | 278 | 15 | 1 | 479 | 19 | 504 | 3.06e-49 | 177 |
MS.gene037539.t1 | MTR_7g066290 | 35.870 | 368 | 177 | 13 | 3 | 326 | 9 | 361 | 7.48e-49 | 174 |
MS.gene037539.t1 | MTR_7g063840 | 29.572 | 514 | 279 | 13 | 4 | 479 | 5 | 473 | 1.86e-47 | 171 |
MS.gene037539.t1 | MTR_7g063920 | 29.032 | 496 | 269 | 10 | 3 | 479 | 5 | 436 | 3.86e-46 | 167 |
MS.gene037539.t1 | MTR_7g063880 | 29.905 | 525 | 259 | 21 | 3 | 479 | 5 | 468 | 1.52e-45 | 166 |
MS.gene037539.t1 | MTR_4g019240 | 70.874 | 103 | 29 | 1 | 4 | 106 | 8 | 109 | 6.64e-45 | 156 |
MS.gene037539.t1 | MTR_4g019240 | 68.627 | 51 | 16 | 0 | 432 | 482 | 113 | 163 | 2.02e-13 | 69.3 |
MS.gene037539.t1 | MTR_2g029400 | 29.278 | 485 | 232 | 16 | 1 | 461 | 6 | 403 | 9.32e-44 | 159 |
MS.gene037539.t1 | MTR_7g063820 | 31.226 | 522 | 278 | 16 | 1 | 479 | 1 | 484 | 6.51e-43 | 159 |
MS.gene037539.t1 | MTR_7g063830 | 28.352 | 522 | 253 | 18 | 1 | 479 | 1 | 444 | 1.09e-36 | 141 |
MS.gene037539.t1 | MTR_7g066480 | 35.312 | 320 | 172 | 11 | 10 | 304 | 17 | 326 | 2.42e-36 | 140 |
MS.gene037539.t1 | MTR_7g058700 | 33.531 | 337 | 156 | 13 | 21 | 318 | 531 | 838 | 7.66e-36 | 142 |
MS.gene037539.t1 | MTR_7g063670 | 27.734 | 512 | 266 | 16 | 6 | 479 | 12 | 457 | 3.62e-34 | 134 |
MS.gene037539.t1 | MTR_3g065200 | 27.551 | 490 | 245 | 17 | 10 | 467 | 4 | 415 | 1.48e-33 | 132 |
MS.gene037539.t1 | MTR_7g066490 | 28.423 | 482 | 238 | 16 | 10 | 474 | 17 | 408 | 8.19e-33 | 129 |
MS.gene037539.t1 | MTR_3g007740 | 27.490 | 502 | 277 | 14 | 1 | 474 | 1 | 443 | 3.05e-32 | 128 |
MS.gene037539.t1 | MTR_7g066280 | 25.814 | 430 | 274 | 14 | 97 | 499 | 1 | 412 | 8.70e-25 | 106 |
MS.gene037539.t1 | MTR_7g066680 | 31.429 | 280 | 147 | 9 | 190 | 453 | 37 | 287 | 2.46e-24 | 104 |
MS.gene037539.t1 | MTR_1g014060 | 31.064 | 235 | 121 | 8 | 18 | 221 | 9 | 233 | 1.24e-21 | 97.1 |
MS.gene037539.t1 | MTR_8g445860 | 27.239 | 268 | 116 | 8 | 236 | 467 | 8 | 232 | 1.27e-19 | 88.6 |
MS.gene037539.t1 | MTR_8g445860 | 26.939 | 245 | 128 | 8 | 1 | 210 | 7 | 235 | 1.26e-12 | 68.2 |
MS.gene037539.t1 | MTR_8g023240 | 24.650 | 357 | 202 | 10 | 9 | 323 | 37 | 368 | 7.95e-18 | 87.0 |
MS.gene037539.t1 | MTR_0150s0010 | 29.268 | 246 | 150 | 7 | 232 | 467 | 1 | 232 | 7.55e-17 | 80.5 |
MS.gene037539.t1 | MTR_0150s0010 | 40.000 | 105 | 48 | 4 | 1 | 104 | 1 | 91 | 2.07e-11 | 64.3 |
MS.gene037539.t1 | MTR_7g062270 | 37.013 | 154 | 75 | 7 | 1 | 142 | 1 | 144 | 9.23e-17 | 82.4 |
MS.gene037539.t1 | MTR_1g115440 | 26.744 | 258 | 148 | 6 | 226 | 467 | 1 | 233 | 1.74e-16 | 79.3 |
MS.gene037539.t1 | MTR_1g115440 | 36.207 | 116 | 58 | 3 | 1 | 114 | 1 | 102 | 1.76e-11 | 64.7 |
MS.gene037539.t1 | MTR_7g063690 | 30.483 | 269 | 130 | 8 | 4 | 268 | 7 | 222 | 2.27e-15 | 76.3 |
MS.gene037539.t1 | MTR_1g115450 | 37.500 | 120 | 60 | 3 | 236 | 352 | 2 | 109 | 6.50e-15 | 72.4 |
MS.gene037539.t1 | MTR_1g115450 | 33.117 | 154 | 71 | 6 | 1 | 138 | 1 | 138 | 3.14e-12 | 64.7 |
MS.gene037539.t1 | MTR_1g115455 | 39.806 | 103 | 46 | 3 | 1 | 102 | 1 | 88 | 9.17e-14 | 71.2 |
MS.gene037539.t1 | MTR_1g115455 | 42.169 | 83 | 40 | 1 | 237 | 311 | 5 | 87 | 3.01e-13 | 69.7 |
MS.gene037539.t1 | MTR_7g100420 | 30.137 | 292 | 160 | 10 | 190 | 469 | 134 | 393 | 1.22e-13 | 73.2 |
MS.gene037539.t1 | MTR_7g100420 | 69.767 | 43 | 13 | 0 | 9 | 51 | 39 | 81 | 1.72e-11 | 66.2 |
MS.gene037539.t1 | MTR_6g006800 | 73.913 | 46 | 10 | 1 | 1 | 44 | 1 | 46 | 1.27e-13 | 66.2 |
MS.gene037539.t1 | MTR_0150s0030 | 38.202 | 89 | 45 | 2 | 237 | 316 | 4 | 91 | 1.50e-12 | 67.0 |
MS.gene037539.t1 | MTR_0150s0030 | 34.314 | 102 | 54 | 1 | 3 | 104 | 2 | 90 | 5.48e-12 | 65.5 |
MS.gene037539.t1 | MTR_8g445920 | 38.889 | 72 | 44 | 0 | 232 | 303 | 1 | 72 | 4.13e-12 | 63.2 |
MS.gene037539.t1 | MTR_8g044890 | 38.889 | 72 | 44 | 0 | 232 | 303 | 1 | 72 | 4.13e-12 | 63.2 |
MS.gene037539.t1 | MTR_8g445910 | 39.326 | 89 | 44 | 2 | 237 | 316 | 4 | 91 | 6.63e-12 | 66.2 |
MS.gene037539.t1 | MTR_8g445910 | 37.255 | 102 | 51 | 2 | 3 | 104 | 2 | 90 | 1.29e-11 | 65.5 |
MS.gene037539.t1 | MTR_8g044880 | 43.284 | 67 | 38 | 0 | 237 | 303 | 4 | 70 | 1.14e-11 | 65.9 |
MS.gene037539.t1 | MTR_8g044880 | 37.255 | 102 | 51 | 2 | 3 | 104 | 2 | 90 | 1.15e-11 | 65.9 |
MS.gene037539.t1 | MTR_7g063870 | 55.556 | 54 | 24 | 0 | 3 | 56 | 25 | 78 | 6.08e-11 | 63.2 |
MS.gene037539.t1 | MTR_7g063720 | 26.667 | 210 | 125 | 5 | 12 | 207 | 26 | 220 | 6.51e-11 | 63.2 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene037539.t1 | AT5G01130 | 31.349 | 504 | 255 | 16 | 1 | 473 | 1 | 444 | 4.35e-58 | 199 |
MS.gene037539.t1 | AT5G01150 | 30.916 | 524 | 282 | 16 | 1 | 481 | 1 | 487 | 2.42e-57 | 198 |
MS.gene037539.t1 | AT5G01120 | 28.881 | 554 | 288 | 17 | 1 | 492 | 1 | 510 | 8.71e-54 | 189 |
MS.gene037539.t1 | AT3G09140 | 28.545 | 536 | 279 | 17 | 1 | 474 | 1 | 494 | 2.69e-48 | 174 |
MS.gene037539.t1 | AT5G43240 | 29.623 | 557 | 290 | 23 | 1 | 500 | 1 | 512 | 4.81e-45 | 166 |
MS.gene037539.t1 | AT5G43240 | 29.623 | 557 | 290 | 23 | 1 | 500 | 1 | 512 | 4.81e-45 | 166 |
MS.gene037539.t1 | AT5G43240 | 29.623 | 557 | 290 | 23 | 1 | 500 | 1 | 512 | 4.81e-45 | 166 |
MS.gene037539.t1 | AT5G01140 | 30.469 | 512 | 267 | 17 | 1 | 479 | 1 | 456 | 1.71e-43 | 160 |
MS.gene037539.t1 | AT3G09140 | 27.128 | 564 | 279 | 18 | 1 | 474 | 1 | 522 | 1.43e-42 | 159 |
MS.gene037539.t1 | AT3G09110 | 30.931 | 333 | 186 | 9 | 1 | 303 | 1 | 319 | 2.46e-40 | 149 |
MS.gene037539.t1 | AT3G09120 | 32.831 | 332 | 160 | 12 | 6 | 295 | 3 | 313 | 2.36e-39 | 145 |
MS.gene037539.t1 | AT3G09120 | 28.689 | 244 | 145 | 8 | 237 | 467 | 2 | 229 | 6.20e-17 | 82.0 |
MS.gene037539.t1 | AT5G37320 | 28.843 | 527 | 270 | 20 | 4 | 474 | 3 | 480 | 2.67e-38 | 146 |
MS.gene037539.t1 | AT5G43240 | 27.557 | 352 | 202 | 14 | 167 | 500 | 52 | 368 | 3.23e-17 | 83.6 |
Find 111 sgRNAs with CRISPR-Local
Find 189 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CACAGGAACAATGAAGATTT+TGG | 0.106889 | 4.3:+82098986 | None:intergenic |
TTCAGTTGATACAAATATTT+TGG | 0.148832 | 4.3:+82097133 | None:intergenic |
GCCTTTGACAAATACAATTT+TGG | 0.171177 | 4.3:-82097668 | MS.gene037539:CDS |
CATCATTTGAGTCAAGATTT+TGG | 0.186194 | 4.3:+82099148 | None:intergenic |
AGGTGGGTTGTCTTTGTTAT+TGG | 0.209021 | 4.3:+82097630 | None:intergenic |
AGGATCCATTGTAAAGCTTT+TGG | 0.229184 | 4.3:-82097449 | MS.gene037539:CDS |
CTCTTACAAAGACCCCATTT+TGG | 0.250177 | 4.3:+82098905 | None:intergenic |
TAATAAACAGCCTAAGAATT+TGG | 0.255600 | 4.3:-82098953 | MS.gene037539:CDS |
CAAGGGAATAATGCCCAAAA+TGG | 0.256693 | 4.3:-82098919 | MS.gene037539:CDS |
AAAGAAGTTGATTCTGGTTT+AGG | 0.264864 | 4.3:+82096742 | None:intergenic |
AAAAGAGTTGATTCTGGTTT+AGG | 0.264864 | 4.3:+82096772 | None:intergenic |
CAGCAGTAAAATGGATATTA+AGG | 0.266548 | 4.3:-82097563 | MS.gene037539:CDS |
GTTGTCTTTGTTATTGGATT+TGG | 0.286232 | 4.3:+82097636 | None:intergenic |
CCCCAGTAACAGCAGTAAAA+TGG | 0.289568 | 4.3:-82097572 | MS.gene037539:CDS |
CCATCAGAGTCCAAATTCTT+AGG | 0.296726 | 4.3:+82098943 | None:intergenic |
ACTACATATTACTATGGTAT+AGG | 0.297573 | 4.3:-82097277 | MS.gene037539:CDS |
TCTGATCCGTTGACAGATCT+TGG | 0.308929 | 4.3:+82097109 | None:intergenic |
ACTTTCAAAGAAGTTGATTC+TGG | 0.313498 | 4.3:+82096736 | None:intergenic |
GTGAAGAGAGCAACATTATA+TGG | 0.320276 | 4.3:-82097070 | MS.gene037539:CDS |
AACGGATCAGAAGATGTTAT+TGG | 0.323448 | 4.3:-82097097 | MS.gene037539:CDS |
CAATGCTTCACAGGGATTCC+TGG | 0.327327 | 4.3:+82099086 | None:intergenic |
AACTAACTGCTGACGCGAAT+TGG | 0.335505 | 4.3:+82097605 | None:intergenic |
ATTCTAATTGCTGTTGTTGT+TGG | 0.345070 | 4.3:+82099214 | None:intergenic |
ATCTTGACTCAAATGATGTT+TGG | 0.353696 | 4.3:-82099143 | MS.gene037539:CDS |
GGAATATTGAGTGGCTGGTT+TGG | 0.356833 | 4.3:+82097319 | None:intergenic |
CTGATCCGTTGACAGATCTT+GGG | 0.368056 | 4.3:+82097110 | None:intergenic |
GTGTGTGATGGTAGTGCTTC+AGG | 0.372250 | 4.3:+82097298 | None:intergenic |
CTACATATTACTATGGTATA+GGG | 0.380267 | 4.3:-82097276 | MS.gene037539:CDS |
GAAGTCAACAAAATCTTCAT+TGG | 0.384187 | 4.3:+82097498 | None:intergenic |
GACAATGGGATTAAAGATAG+AGG | 0.393004 | 4.3:-82097194 | MS.gene037539:CDS |
TTTACTGCTGTTACTGGGGC+AGG | 0.397489 | 4.3:+82097576 | None:intergenic |
AGCCTCCTTATCATGCCATT+AGG | 0.400345 | 4.3:-82097469 | MS.gene037539:CDS |
ATGCAGATGTTGATTGAATC+CGG | 0.403317 | 4.3:-82098817 | MS.gene037539:intron |
TCACACACTACATATTACTA+TGG | 0.403604 | 4.3:-82097283 | MS.gene037539:CDS |
GGATTGAGTAACACAGAAAC+CGG | 0.407217 | 4.3:+82097367 | None:intergenic |
AAGGGAATAATGCCCAAAAT+GGG | 0.410995 | 4.3:-82098918 | MS.gene037539:CDS |
TGTTGTTGTCGGTGGCTAAA+AGG | 0.414665 | 4.3:+82099241 | None:intergenic |
TTGTTGGTTGTTGTTGTTGT+CGG | 0.415272 | 4.3:+82099230 | None:intergenic |
GATTCCCCTCAAATTGTTAG+TGG | 0.418530 | 4.3:-82099361 | MS.gene037539:CDS |
AGCAGCATTTGTTTGCATAC+AGG | 0.418740 | 4.3:+82099114 | None:intergenic |
TCCTCTAGTTGAGTCAAGTC+TGG | 0.422333 | 4.3:+82098790 | None:intergenic |
ACATTCAAAAGAGTTGATTC+TGG | 0.427743 | 4.3:+82096766 | None:intergenic |
TTAGAATCATCTCCATTCCT+TGG | 0.428257 | 4.3:-82099198 | MS.gene037539:CDS |
ATTCTTAGGCTGTTTATTAG+TGG | 0.429316 | 4.3:+82098957 | None:intergenic |
CTTCAGGAATATTGAGTGGC+TGG | 0.429354 | 4.3:+82097314 | None:intergenic |
CAAAGGCTCATGAGAGGTTA+AGG | 0.430177 | 4.3:+82097684 | None:intergenic |
GTTTGTCCACTAACAATTTG+AGG | 0.431321 | 4.3:+82099355 | None:intergenic |
GTGTAGGCTTTGCGCTTCCT+TGG | 0.434164 | 4.3:-82096853 | MS.gene037539:intron |
TTCTTAGGCTGTTTATTAGT+GGG | 0.434937 | 4.3:+82098958 | None:intergenic |
AGCAAAGAATTAGAAGAAAG+TGG | 0.435467 | 4.3:+82097022 | None:intergenic |
CCTGGTATAGCACCACAGTT+TGG | 0.441678 | 4.3:-82097346 | MS.gene037539:CDS |
CTTCATGCACAATGCTTCAC+AGG | 0.442099 | 4.3:+82099077 | None:intergenic |
AACAAATGCTGCTGCATCCC+AGG | 0.442581 | 4.3:-82099104 | MS.gene037539:CDS |
TTTGATCGTAATGTGACAAT+GGG | 0.446693 | 4.3:-82097208 | MS.gene037539:CDS |
GCCAAAATTGTATTTGTCAA+AGG | 0.452427 | 4.3:+82097667 | None:intergenic |
CAAAATCTTCATTGTTCCTG+TGG | 0.454041 | 4.3:-82098985 | MS.gene037539:CDS |
GCAGCATTTGTTTGCATACA+GGG | 0.462327 | 4.3:+82099115 | None:intergenic |
CTGGTTTAGGCACACTCAAA+AGG | 0.467866 | 4.3:+82096785 | None:intergenic |
GTTTCTGTGTTACTCAATCC+TGG | 0.470852 | 4.3:-82097364 | MS.gene037539:CDS |
ACTGCTGACGCGAATTGGTT+AGG | 0.479883 | 4.3:+82097610 | None:intergenic |
AGCTTTACAATGGATCCTAA+TGG | 0.496722 | 4.3:+82097454 | None:intergenic |
AGAGCAACATTATATGGTAT+AGG | 0.499621 | 4.3:-82097064 | MS.gene037539:CDS |
CCAAACTGTGGTGCTATACC+AGG | 0.500141 | 4.3:+82097346 | None:intergenic |
AGGAGTGATTTCTATGTCAC+GGG | 0.505545 | 4.3:-82097170 | MS.gene037539:CDS |
TTTGTCCACTAACAATTTGA+GGG | 0.510209 | 4.3:+82099356 | None:intergenic |
AATGCTTCACAGGGATTCCT+GGG | 0.511341 | 4.3:+82099087 | None:intergenic |
TGGATCCTAATGGCATGATA+AGG | 0.526729 | 4.3:+82097464 | None:intergenic |
CAAGATTTACCTTGACTAGT+GGG | 0.536805 | 4.3:-82096816 | MS.gene037539:CDS |
ACACAGCCAGCAAAAGAGTT+CGG | 0.547905 | 4.3:+82097424 | None:intergenic |
TTACTGCTGTTACTGGGGCA+GGG | 0.548093 | 4.3:+82097577 | None:intergenic |
CTTCAAGATCATCAAGAGGA+AGG | 0.549012 | 4.3:+82096978 | None:intergenic |
AGTTTCTTATCTCTTCCACT+AGG | 0.552281 | 4.3:-82099276 | MS.gene037539:CDS |
TCAAGATTTACCTTGACTAG+TGG | 0.553137 | 4.3:-82096817 | MS.gene037539:CDS |
ACAATGGGATTAAAGATAGA+GGG | 0.553301 | 4.3:-82097193 | MS.gene037539:CDS |
ATTTGGACTCTGATGGTCAA+GGG | 0.559948 | 4.3:-82098936 | MS.gene037539:CDS |
GTCTTTAAGCCCACTAGTCA+AGG | 0.567139 | 4.3:+82096807 | None:intergenic |
TGCAGATGTTGATTGAATCC+GGG | 0.567832 | 4.3:-82098816 | MS.gene037539:intron |
ATGGGATTAAAGATAGAGGG+AGG | 0.573935 | 4.3:-82097190 | MS.gene037539:CDS |
TTGGTTGTTGTTGTTGTCGG+TGG | 0.574189 | 4.3:+82099233 | None:intergenic |
GCTGATAAGCATTGGTGAAG+CGG | 0.574463 | 4.3:-82096951 | MS.gene037539:CDS |
TTGAGTCAAGTCTGGATACC+CGG | 0.574651 | 4.3:+82098798 | None:intergenic |
CCTAAGAATTTGGACTCTGA+TGG | 0.584071 | 4.3:-82098943 | MS.gene037539:CDS |
TGGTGATTTGTACAAAAGTG+TGG | 0.589324 | 4.3:-82097401 | MS.gene037539:CDS |
GAGGAGTGATTTCTATGTCA+CGG | 0.590457 | 4.3:-82097171 | MS.gene037539:CDS |
ACTCAACATTGGCAAGAATG+AGG | 0.596978 | 4.3:-82098761 | MS.gene037539:intron |
CGGTCCCAAAAGCTTTACAA+TGG | 0.598458 | 4.3:+82097444 | None:intergenic |
AAGTGTGGAGAACTTGAACC+CGG | 0.604718 | 4.3:-82097386 | MS.gene037539:CDS |
TTCATGCACAATGCTTCACA+GGG | 0.606125 | 4.3:+82099078 | None:intergenic |
ATCCTAATGGCATGATAAGG+AGG | 0.608383 | 4.3:+82097467 | None:intergenic |
AGGTTAAGGCATACTTGAGG+AGG | 0.618815 | 4.3:+82097698 | None:intergenic |
CTGACGCGAATTGGTTAGGT+GGG | 0.620135 | 4.3:+82097614 | None:intergenic |
TTCACTTCAAGATCATCAAG+AGG | 0.622399 | 4.3:+82096974 | None:intergenic |
GAGGAAGTCACACTCAACAT+TGG | 0.623038 | 4.3:-82098772 | MS.gene037539:CDS |
GCTGACGCGAATTGGTTAGG+TGG | 0.625599 | 4.3:+82097613 | None:intergenic |
TTGTCCACTAACAATTTGAG+GGG | 0.626053 | 4.3:+82099357 | None:intergenic |
TCCAGACTTGACTCAACTAG+AGG | 0.641739 | 4.3:-82098791 | MS.gene037539:CDS |
AATTTGGACTCTGATGGTCA+AGG | 0.642808 | 4.3:-82098937 | MS.gene037539:CDS |
ATTTGTCAAAGGCTCATGAG+AGG | 0.647356 | 4.3:+82097678 | None:intergenic |
GATAAGCATTGGTGAAGCGG+AGG | 0.652499 | 4.3:-82096948 | MS.gene037539:intron |
AGGGAATAATGCCCAAAATG+GGG | 0.662697 | 4.3:-82098917 | MS.gene037539:CDS |
GAAGTGAAGCTGATAAGCAT+TGG | 0.664925 | 4.3:-82096959 | MS.gene037539:CDS |
TAGTAATATGTAGTGTGTGA+TGG | 0.665437 | 4.3:+82097286 | None:intergenic |
TTGATGTCAAGAATGCTCCA+AGG | 0.669048 | 4.3:+82096836 | None:intergenic |
AGGCGAACGATGGTGCCTAG+TGG | 0.669570 | 4.3:+82099261 | None:intergenic |
GGTGGCTAAAAGGCGAACGA+TGG | 0.673624 | 4.3:+82099251 | None:intergenic |
CTGAACCCAAGATCTGTCAA+CGG | 0.682568 | 4.3:-82097115 | MS.gene037539:CDS |
GAGAGGTTAAGGCATACTTG+AGG | 0.684746 | 4.3:+82097695 | None:intergenic |
GATTGAGTAACACAGAAACC+GGG | 0.708506 | 4.3:+82097368 | None:intergenic |
AGTGCTTCAGGAATATTGAG+TGG | 0.733381 | 4.3:+82097310 | None:intergenic |
TGGTTTGGACAACCAAACTG+TGG | 0.745392 | 4.3:+82097334 | None:intergenic |
GGAGTGATTTCTATGTCACG+GGG | 0.766109 | 4.3:-82097169 | MS.gene037539:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | TTGATAATAAAAAGAAAAAA+CGG | + | chr4.3:82097396-82097415 | None:intergenic | 10.0% |
!! | TGATAATAAAAAGAAAAAAC+GGG | + | chr4.3:82097395-82097414 | None:intergenic | 15.0% |
!!! | GTTTTTTCTTTTTATTATCA+AGG | - | chr4.3:82097395-82097414 | MS.gene037539:CDS | 15.0% |
!! | AAAGATTGTTTAGATTTAAG+AGG | + | chr4.3:82097574-82097593 | None:intergenic | 20.0% |
!! | ACAAAATGTTAAAACACAAA+AGG | + | chr4.3:82098359-82098378 | None:intergenic | 20.0% |
!! | ACATAAAAGCAAAACTAAAA+AGG | + | chr4.3:82098129-82098148 | None:intergenic | 20.0% |
!! | ATGAAATTGCAGAAAAAAAA+AGG | + | chr4.3:82098290-82098309 | None:intergenic | 20.0% |
!! | GAAATTAAAAACTTCTGTAA+AGG | - | chr4.3:82098209-82098228 | MS.gene037539:intron | 20.0% |
!! | TCGTAAAAAATCTATGTAAT+GGG | + | chr4.3:82097971-82097990 | None:intergenic | 20.0% |
!! | TTGAATGAAAGAATGAAAAT+AGG | + | chr4.3:82098257-82098276 | None:intergenic | 20.0% |
!!! | AAATATGAGACATTTAAGTT+AGG | + | chr4.3:82097439-82097458 | None:intergenic | 20.0% |
!!! | AGATTAAGAAACATGATTTT+CGG | - | chr4.3:82097513-82097532 | MS.gene037539:CDS | 20.0% |
!!! | TAGATAATATTTTTCCATGT+AGG | + | chr4.3:82097674-82097693 | None:intergenic | 20.0% |
!!! | TATTGATTTATTTACCTACA+TGG | - | chr4.3:82097657-82097676 | MS.gene037539:CDS | 20.0% |
!!! | TTCAGTTGATACAAATATTT+TGG | + | chr4.3:82098959-82098978 | None:intergenic | 20.0% |
!!! | TTTTCAATTTTTTTCTTCCT+AGG | - | chr4.3:82098318-82098337 | MS.gene037539:intron | 20.0% |
! | ACAATTAAAGTGAATCAAAG+AGG | + | chr4.3:82099215-82099234 | None:intergenic | 25.0% |
! | ACTACATATTACTATGGTAT+AGG | - | chr4.3:82098812-82098831 | MS.gene037539:CDS | 25.0% |
! | ATTCACTTTAATTGTTGTGT+AGG | - | chr4.3:82099220-82099239 | MS.gene037539:CDS | 25.0% |
! | CGTAAAAAATCTATGTAATG+GGG | + | chr4.3:82097970-82097989 | None:intergenic | 25.0% |
! | CTACATATTACTATGGTATA+GGG | - | chr4.3:82098813-82098832 | MS.gene037539:CDS | 25.0% |
! | CTCGTAAAAAATCTATGTAA+TGG | + | chr4.3:82097972-82097991 | None:intergenic | 25.0% |
! | GTAAAAAATCTATGTAATGG+GGG | + | chr4.3:82097969-82097988 | None:intergenic | 25.0% |
! | TAATAAACAGCCTAAGAATT+TGG | - | chr4.3:82097136-82097155 | MS.gene037539:CDS | 25.0% |
! | TCTCATATTTCTCAAAAATG+CGG | - | chr4.3:82097449-82097468 | MS.gene037539:CDS | 25.0% |
! | TTAATCTTATCGATCTCATA+AGG | + | chr4.3:82097500-82097519 | None:intergenic | 25.0% |
! | TTCTGTAAAGGTGAAATATT+TGG | - | chr4.3:82098221-82098240 | MS.gene037539:intron | 25.0% |
!! | AATCTAAACAATCTTTTCGT+AGG | - | chr4.3:82097578-82097597 | MS.gene037539:CDS | 25.0% |
!!! | AGCTAGTTTTATAGCAATTA+TGG | + | chr4.3:82097922-82097941 | None:intergenic | 25.0% |
ACAATGGGATTAAAGATAGA+GGG | - | chr4.3:82098896-82098915 | MS.gene037539:intron | 30.0% | |
AGAAAATGGATCATTGTTTC+TGG | - | chr4.3:82097205-82097224 | MS.gene037539:CDS | 30.0% | |
AGAGCAACATTATATGGTAT+AGG | - | chr4.3:82099025-82099044 | MS.gene037539:CDS | 30.0% | |
AGCAAAGAATTAGAAGAAAG+TGG | + | chr4.3:82099070-82099089 | None:intergenic | 30.0% | |
ATAAAATGCAGACAAATGCT+AGG | - | chr4.3:82098017-82098036 | MS.gene037539:intron | 30.0% | |
ATCTTGACTCAAATGATGTT+TGG | - | chr4.3:82096946-82096965 | MS.gene037539:intron | 30.0% | |
ATGTTAATGTTCCAAGTGAA+AGG | - | chr4.3:82098065-82098084 | MS.gene037539:intron | 30.0% | |
ATTCTTAGGCTGTTTATTAG+TGG | + | chr4.3:82097135-82097154 | None:intergenic | 30.0% | |
CACACAAAAACTTTACTTGT+TGG | + | chr4.3:82097056-82097075 | None:intergenic | 30.0% | |
CAGCAGTAAAATGGATATTA+AGG | - | chr4.3:82098526-82098545 | MS.gene037539:intron | 30.0% | |
GAAGTCAACAAAATCTTCAT+TGG | + | chr4.3:82098594-82098613 | None:intergenic | 30.0% | |
GCCAAAATTGTATTTGTCAA+AGG | + | chr4.3:82098425-82098444 | None:intergenic | 30.0% | |
GCTAGTAAAATATGTATGCA+TGG | + | chr4.3:82098181-82098200 | None:intergenic | 30.0% | |
GTATAGGAATAAACAAACCA+TGG | - | chr4.3:82097535-82097554 | MS.gene037539:CDS | 30.0% | |
TAGTAATATGTAGTGTGTGA+TGG | + | chr4.3:82098806-82098825 | None:intergenic | 30.0% | |
TCACACACTACATATTACTA+TGG | - | chr4.3:82098806-82098825 | MS.gene037539:CDS | 30.0% | |
TTCTTAGGCTGTTTATTAGT+GGG | + | chr4.3:82097134-82097153 | None:intergenic | 30.0% | |
TTTGATCGTAATGTGACAAT+GGG | - | chr4.3:82098881-82098900 | MS.gene037539:intron | 30.0% | |
TTTGTCCACTAACAATTTGA+GGG | + | chr4.3:82096736-82096755 | None:intergenic | 30.0% | |
! | ACATTCAAAAGAGTTGATTC+TGG | + | chr4.3:82099326-82099345 | None:intergenic | 30.0% |
! | ACATTTAAGTTAGGCAAGTA+AGG | + | chr4.3:82097430-82097449 | None:intergenic | 30.0% |
! | ACTTTCAAAGAAGTTGATTC+TGG | + | chr4.3:82099356-82099375 | None:intergenic | 30.0% |
! | AGAAACATGATTTTCGGTAT+AGG | - | chr4.3:82097519-82097538 | MS.gene037539:CDS | 30.0% |
! | ATTCTAATTGCTGTTGTTGT+TGG | + | chr4.3:82096878-82096897 | None:intergenic | 30.0% |
! | ATTTGAGTCAAGATTTTGGA+CGG | + | chr4.3:82096940-82096959 | None:intergenic | 30.0% |
! | CATCATTTGAGTCAAGATTT+TGG | + | chr4.3:82096944-82096963 | None:intergenic | 30.0% |
! | GCCTTTGACAAATACAATTT+TGG | - | chr4.3:82098421-82098440 | MS.gene037539:intron | 30.0% |
! | TAGCATTTGTCTGCATTTTA+TGG | + | chr4.3:82098018-82098037 | None:intergenic | 30.0% |
! | TCTAGTCGATTTAATAGATC+AGG | - | chr4.3:82097690-82097709 | MS.gene037539:CDS | 30.0% |
! | TTTTGATCGTAATGTGACAA+TGG | - | chr4.3:82098880-82098899 | MS.gene037539:intron | 30.0% |
! | TTTTTGATGTTTCCAAGGAA+TGG | + | chr4.3:82096906-82096925 | None:intergenic | 30.0% |
!! | AAAAGAGTTGATTCTGGTTT+AGG | + | chr4.3:82099320-82099339 | None:intergenic | 30.0% |
!! | AAAGAAGTTGATTCTGGTTT+AGG | + | chr4.3:82099350-82099369 | None:intergenic | 30.0% |
!! | GTTGTCTTTGTTATTGGATT+TGG | + | chr4.3:82098456-82098475 | None:intergenic | 30.0% |
!!! | GTCAATGTTGATTCTGTTTT+AGG | + | chr4.3:82099380-82099399 | None:intergenic | 30.0% |
AAAAATGCGGTTCGATTGTT+GGG | - | chr4.3:82097462-82097481 | MS.gene037539:CDS | 35.0% | |
AAATTGGTGGAAAACATGGA+TGG | - | chr4.3:82097762-82097781 | MS.gene037539:intron | 35.0% | |
AACGGATCAGAAGATGTTAT+TGG | - | chr4.3:82098992-82099011 | MS.gene037539:CDS | 35.0% | |
AAGGGAATAATGCCCAAAAT+GGG | - | chr4.3:82097171-82097190 | MS.gene037539:CDS | 35.0% | |
ACGAAAATTGGTGGAAAACA+TGG | - | chr4.3:82097758-82097777 | MS.gene037539:intron | 35.0% | |
AGCATGATATTTGCAGAGAA+CGG | + | chr4.3:82098097-82098116 | None:intergenic | 35.0% | |
AGCTTTACAATGGATCCTAA+TGG | + | chr4.3:82098638-82098657 | None:intergenic | 35.0% | |
AGTTTCTTATCTCTTCCACT+AGG | - | chr4.3:82096813-82096832 | MS.gene037539:CDS | 35.0% | |
CAAAATCTTCATTGTTCCTG+TGG | - | chr4.3:82097104-82097123 | MS.gene037539:CDS | 35.0% | |
CAAGATTTACCTTGACTAGT+GGG | - | chr4.3:82099273-82099292 | MS.gene037539:CDS | 35.0% | |
GACAATGGGATTAAAGATAG+AGG | - | chr4.3:82098895-82098914 | MS.gene037539:intron | 35.0% | |
GGTAAGAAAAACATGAACCT+AGG | + | chr4.3:82098338-82098357 | None:intergenic | 35.0% | |
GTGAAGAGAGCAACATTATA+TGG | - | chr4.3:82099019-82099038 | MS.gene037539:CDS | 35.0% | |
GTTTGTCCACTAACAATTTG+AGG | + | chr4.3:82096737-82096756 | None:intergenic | 35.0% | |
TCAAGATTTACCTTGACTAG+TGG | - | chr4.3:82099272-82099291 | MS.gene037539:CDS | 35.0% | |
TTAGAATCATCTCCATTCCT+TGG | - | chr4.3:82096891-82096910 | MS.gene037539:intron | 35.0% | |
TTCACTTCAAGATCATCAAG+AGG | + | chr4.3:82099118-82099137 | None:intergenic | 35.0% | |
TTGTCCACTAACAATTTGAG+GGG | + | chr4.3:82096735-82096754 | None:intergenic | 35.0% | |
! | ACTAGCTCTCTTTCAATCTT+AGG | - | chr4.3:82097935-82097954 | MS.gene037539:intron | 35.0% |
! | AGAGGTTTTTGATGTTTCCA+AGG | + | chr4.3:82096911-82096930 | None:intergenic | 35.0% |
! | AGGATCCATTGTAAAGCTTT+TGG | - | chr4.3:82098640-82098659 | MS.gene037539:intron | 35.0% |
! | ATCCATTTTACTGCTGTTAC+TGG | + | chr4.3:82098522-82098541 | None:intergenic | 35.0% |
! | ATGCAGATGTTGATTGAATC+CGG | - | chr4.3:82097272-82097291 | MS.gene037539:CDS | 35.0% |
! | CACAGGAACAATGAAGATTT+TGG | + | chr4.3:82097106-82097125 | None:intergenic | 35.0% |
! | GGATCCATTGTAAAGCTTTT+GGG | - | chr4.3:82098641-82098660 | MS.gene037539:intron | 35.0% |
! | TCCATTTTACTGCTGTTACT+GGG | + | chr4.3:82098521-82098540 | None:intergenic | 35.0% |
! | TCTTACAAAGACCCCATTTT+GGG | + | chr4.3:82097186-82097205 | None:intergenic | 35.0% |
! | TGGTGATTTGTACAAAAGTG+TGG | - | chr4.3:82098688-82098707 | MS.gene037539:intron | 35.0% |
! | TTGTTGGTTGTTGTTGTTGT+CGG | + | chr4.3:82096862-82096881 | None:intergenic | 35.0% |
!!! | TTTATTAGTGGGTTTTCCAC+AGG | + | chr4.3:82097123-82097142 | None:intergenic | 35.0% |
AACGGATCTATCCTTTCACT+TGG | + | chr4.3:82098079-82098098 | None:intergenic | 40.0% | |
AATCAATTTGATCCCCCGAT+TGG | + | chr4.3:82097617-82097636 | None:intergenic | 40.0% | |
AATTTGGACTCTGATGGTCA+AGG | - | chr4.3:82097152-82097171 | MS.gene037539:CDS | 40.0% | |
ACTCAACATTGGCAAGAATG+AGG | - | chr4.3:82097328-82097347 | MS.gene037539:CDS | 40.0% | |
AGCAGCATTTGTTTGCATAC+AGG | + | chr4.3:82096978-82096997 | None:intergenic | 40.0% | |
AGGAGTGATTTCTATGTCAC+GGG | - | chr4.3:82098919-82098938 | MS.gene037539:CDS | 40.0% | |
AGGGAATAATGCCCAAAATG+GGG | - | chr4.3:82097172-82097191 | MS.gene037539:CDS | 40.0% | |
AGTGCTTCAGGAATATTGAG+TGG | + | chr4.3:82098782-82098801 | None:intergenic | 40.0% | |
ATCCTAATGGCATGATAAGG+AGG | + | chr4.3:82098625-82098644 | None:intergenic | 40.0% | |
ATGGGATTAAAGATAGAGGG+AGG | - | chr4.3:82098899-82098918 | MS.gene037539:intron | 40.0% | |
ATTTGGACTCTGATGGTCAA+GGG | - | chr4.3:82097153-82097172 | MS.gene037539:CDS | 40.0% | |
ATTTGTCAAAGGCTCATGAG+AGG | + | chr4.3:82098414-82098433 | None:intergenic | 40.0% | |
CAAAAATGCGGTTCGATTGT+TGG | - | chr4.3:82097461-82097480 | MS.gene037539:CDS | 40.0% | |
CAAGGGAATAATGCCCAAAA+TGG | - | chr4.3:82097170-82097189 | MS.gene037539:CDS | 40.0% | |
CCATCAGAGTCCAAATTCTT+AGG | + | chr4.3:82097149-82097168 | None:intergenic | 40.0% | |
CCTAAGAATTTGGACTCTGA+TGG | - | chr4.3:82097146-82097165 | MS.gene037539:CDS | 40.0% | |
CTTCAAGATCATCAAGAGGA+AGG | + | chr4.3:82099114-82099133 | None:intergenic | 40.0% | |
GAAGTGAAGCTGATAAGCAT+TGG | - | chr4.3:82099130-82099149 | MS.gene037539:CDS | 40.0% | |
GAGGAGTGATTTCTATGTCA+CGG | - | chr4.3:82098918-82098937 | MS.gene037539:CDS | 40.0% | |
GATTCCCCTCAAATTGTTAG+TGG | - | chr4.3:82096728-82096747 | MS.gene037539:CDS | 40.0% | |
GATTGAGTAACACAGAAACC+GGG | + | chr4.3:82098724-82098743 | None:intergenic | 40.0% | |
GCAGCATTTGTTTGCATACA+GGG | + | chr4.3:82096977-82096996 | None:intergenic | 40.0% | |
GGATTCAATCAACATCTGCA+TGG | + | chr4.3:82097273-82097292 | None:intergenic | 40.0% | |
GGATTGAGTAACACAGAAAC+CGG | + | chr4.3:82098725-82098744 | None:intergenic | 40.0% | |
GGGGTCTTTGTAAGAGAAAA+TGG | - | chr4.3:82097191-82097210 | MS.gene037539:CDS | 40.0% | |
TAACGTTGGACGAAAATTGG+TGG | - | chr4.3:82097749-82097768 | MS.gene037539:intron | 40.0% | |
TGCTAACGTTGGACGAAAAT+TGG | - | chr4.3:82097746-82097765 | MS.gene037539:intron | 40.0% | |
TGGATCCTAATGGCATGATA+AGG | + | chr4.3:82098628-82098647 | None:intergenic | 40.0% | |
TTCAATCAACATCTGCATGG+AGG | + | chr4.3:82097270-82097289 | None:intergenic | 40.0% | |
TTCATGCACAATGCTTCACA+GGG | + | chr4.3:82097014-82097033 | None:intergenic | 40.0% | |
TTGATGTCAAGAATGCTCCA+AGG | + | chr4.3:82099256-82099275 | None:intergenic | 40.0% | |
! | AGTCAAGATTTTGGACGGTT+TGG | + | chr4.3:82096935-82096954 | None:intergenic | 40.0% |
! | CCATTTTACTGCTGTTACTG+GGG | + | chr4.3:82098520-82098539 | None:intergenic | 40.0% |
! | CTCTTACAAAGACCCCATTT+TGG | + | chr4.3:82097187-82097206 | None:intergenic | 40.0% |
! | GTTTCTGTGTTACTCAATCC+TGG | - | chr4.3:82098725-82098744 | MS.gene037539:intron | 40.0% |
! | TCTATGTAATGGGGGCATAA+TGG | + | chr4.3:82097961-82097980 | None:intergenic | 40.0% |
! | TGCAGATGTTGATTGAATCC+GGG | - | chr4.3:82097273-82097292 | MS.gene037539:CDS | 40.0% |
! | TTCACGAAGTACTCACGAAA+TGG | - | chr4.3:82097722-82097741 | MS.gene037539:intron | 40.0% |
!! | AGGTGGGTTGTCTTTGTTAT+TGG | + | chr4.3:82098462-82098481 | None:intergenic | 40.0% |
AACTAACTGCTGACGCGAAT+TGG | + | chr4.3:82098487-82098506 | None:intergenic | 45.0% | |
AAGTGTGGAGAACTTGAACC+CGG | - | chr4.3:82098703-82098722 | MS.gene037539:intron | 45.0% | |
AATGCTTCACAGGGATTCCT+GGG | + | chr4.3:82097005-82097024 | None:intergenic | 45.0% | |
ACACAGCCAGCAAAAGAGTT+CGG | + | chr4.3:82098668-82098687 | None:intergenic | 45.0% | |
AGCCTCCTTATCATGCCATT+AGG | - | chr4.3:82098620-82098639 | MS.gene037539:intron | 45.0% | |
AGGTTAAGGCATACTTGAGG+AGG | + | chr4.3:82098394-82098413 | None:intergenic | 45.0% | |
ATTTGATCCCCCGATTGGAT+CGG | + | chr4.3:82097612-82097631 | None:intergenic | 45.0% | |
CAAAGGCTCATGAGAGGTTA+AGG | + | chr4.3:82098408-82098427 | None:intergenic | 45.0% | |
CACGAAATGGTTGCTAACGT+TGG | - | chr4.3:82097735-82097754 | MS.gene037539:intron | 45.0% | |
CCCCAGTAACAGCAGTAAAA+TGG | - | chr4.3:82098517-82098536 | MS.gene037539:intron | 45.0% | |
CGGTCCCAAAAGCTTTACAA+TGG | + | chr4.3:82098648-82098667 | None:intergenic | 45.0% | |
CTGAACCCAAGATCTGTCAA+CGG | - | chr4.3:82098974-82098993 | MS.gene037539:CDS | 45.0% | |
CTGATCCGTTGACAGATCTT+GGG | + | chr4.3:82098982-82099001 | None:intergenic | 45.0% | |
CTGCAAATATCATGCTGCAG+TGG | - | chr4.3:82098101-82098120 | MS.gene037539:intron | 45.0% | |
CTGGTTTAGGCACACTCAAA+AGG | + | chr4.3:82099307-82099326 | None:intergenic | 45.0% | |
CTTCAGGAATATTGAGTGGC+TGG | + | chr4.3:82098778-82098797 | None:intergenic | 45.0% | |
CTTCATGCACAATGCTTCAC+AGG | + | chr4.3:82097015-82097034 | None:intergenic | 45.0% | |
GAGAGGTTAAGGCATACTTG+AGG | + | chr4.3:82098397-82098416 | None:intergenic | 45.0% | |
GAGGAAGTCACACTCAACAT+TGG | - | chr4.3:82097317-82097336 | MS.gene037539:CDS | 45.0% | |
GGAGTGATTTCTATGTCACG+GGG | - | chr4.3:82098920-82098939 | MS.gene037539:CDS | 45.0% | |
GTCTTTAAGCCCACTAGTCA+AGG | + | chr4.3:82099285-82099304 | None:intergenic | 45.0% | |
TCCAGACTTGACTCAACTAG+AGG | - | chr4.3:82097298-82097317 | MS.gene037539:CDS | 45.0% | |
TCCTCTAGTTGAGTCAAGTC+TGG | + | chr4.3:82097302-82097321 | None:intergenic | 45.0% | |
TCTGATCCGTTGACAGATCT+TGG | + | chr4.3:82098983-82099002 | None:intergenic | 45.0% | |
TGCAGACAAATGCTAGGATG+TGG | - | chr4.3:82098023-82098042 | MS.gene037539:intron | 45.0% | |
TGTTGTTGTCGGTGGCTAAA+AGG | + | chr4.3:82096851-82096870 | None:intergenic | 45.0% | |
TTGAGTCAAGTCTGGATACC+CGG | + | chr4.3:82097294-82097313 | None:intergenic | 45.0% | |
! | GAGGCGCTTAGATTTATCCA+TGG | + | chr4.3:82097555-82097574 | None:intergenic | 45.0% |
! | GGAATATTGAGTGGCTGGTT+TGG | + | chr4.3:82098773-82098792 | None:intergenic | 45.0% |
! | TGGTTTGGACAACCAAACTG+TGG | + | chr4.3:82098758-82098777 | None:intergenic | 45.0% |
! | TTGGTTGTTGTTGTTGTCGG+TGG | + | chr4.3:82096859-82096878 | None:intergenic | 45.0% |
!! | AACTCTTTTGCTGGCTGTGT+TGG | - | chr4.3:82098668-82098687 | MS.gene037539:intron | 45.0% |
!! | GCTGATAAGCATTGGTGAAG+CGG | - | chr4.3:82099138-82099157 | MS.gene037539:CDS | 45.0% |
!!! | GATTTTGGACGGTTTGGTAG+AGG | + | chr4.3:82096929-82096948 | None:intergenic | 45.0% |
AACAAATGCTGCTGCATCCC+AGG | - | chr4.3:82096985-82097004 | MS.gene037539:CDS | 50.0% | |
ACTGCTGACGCGAATTGGTT+AGG | + | chr4.3:82098482-82098501 | None:intergenic | 50.0% | |
AGTTTGTCCCGATCCAATCG+GGG | - | chr4.3:82097601-82097620 | MS.gene037539:CDS | 50.0% | |
CAATGCTTCACAGGGATTCC+TGG | + | chr4.3:82097006-82097025 | None:intergenic | 50.0% | |
CCTGGTATAGCACCACAGTT+TGG | - | chr4.3:82098743-82098762 | MS.gene037539:intron | 50.0% | |
CTGACGCGAATTGGTTAGGT+GGG | + | chr4.3:82098478-82098497 | None:intergenic | 50.0% | |
GAGTTTGTCCCGATCCAATC+GGG | - | chr4.3:82097600-82097619 | MS.gene037539:CDS | 50.0% | |
GCGGTTCGATTGTTGGGATT+TGG | - | chr4.3:82097468-82097487 | MS.gene037539:CDS | 50.0% | |
GGAGTTTGTCCCGATCCAAT+CGG | - | chr4.3:82097599-82097618 | MS.gene037539:CDS | 50.0% | |
TTACTGCTGTTACTGGGGCA+GGG | + | chr4.3:82098515-82098534 | None:intergenic | 50.0% | |
TTTACTGCTGTTACTGGGGC+AGG | + | chr4.3:82098516-82098535 | None:intergenic | 50.0% | |
TTTGATCCCCCGATTGGATC+GGG | + | chr4.3:82097611-82097630 | None:intergenic | 50.0% | |
! | GTGTGTGATGGTAGTGCTTC+AGG | + | chr4.3:82098794-82098813 | None:intergenic | 50.0% |
! | TTGGGACCGAACTCTTTTGC+TGG | - | chr4.3:82098659-82098678 | MS.gene037539:intron | 50.0% |
!! | CCAAACTGTGGTGCTATACC+AGG | + | chr4.3:82098746-82098765 | None:intergenic | 50.0% |
!! | GATAAGCATTGGTGAAGCGG+AGG | - | chr4.3:82099141-82099160 | MS.gene037539:CDS | 50.0% |
CATCTGCATGGAGGACAGCA+AGG | + | chr4.3:82097261-82097280 | None:intergenic | 55.0% | |
GCTGACGCGAATTGGTTAGG+TGG | + | chr4.3:82098479-82098498 | None:intergenic | 55.0% | |
GGTGGCTAAAAGGCGAACGA+TGG | + | chr4.3:82096841-82096860 | None:intergenic | 55.0% | |
GTGTAGGCTTTGCGCTTCCT+TGG | - | chr4.3:82099236-82099255 | MS.gene037539:CDS | 55.0% | |
GTTTGTCCCGATCCAATCGG+GGG | - | chr4.3:82097602-82097621 | MS.gene037539:CDS | 55.0% | |
AGGCGAACGATGGTGCCTAG+TGG | + | chr4.3:82096831-82096850 | None:intergenic | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr4.3 | gene | 82096702 | 82099409 | 82096702 | ID=MS.gene037539 |
chr4.3 | mRNA | 82096702 | 82099409 | 82096702 | ID=MS.gene037539.t1;Parent=MS.gene037539 |
chr4.3 | exon | 82098912 | 82099409 | 82098912 | ID=MS.gene037539.t1.exon1;Parent=MS.gene037539.t1 |
chr4.3 | CDS | 82098912 | 82099409 | 82098912 | ID=cds.MS.gene037539.t1;Parent=MS.gene037539.t1 |
chr4.3 | exon | 82098762 | 82098833 | 82098762 | ID=MS.gene037539.t1.exon2;Parent=MS.gene037539.t1 |
chr4.3 | CDS | 82098762 | 82098833 | 82098762 | ID=cds.MS.gene037539.t1;Parent=MS.gene037539.t1 |
chr4.3 | exon | 82096949 | 82097728 | 82096949 | ID=MS.gene037539.t1.exon3;Parent=MS.gene037539.t1 |
chr4.3 | CDS | 82096949 | 82097728 | 82096949 | ID=cds.MS.gene037539.t1;Parent=MS.gene037539.t1 |
chr4.3 | exon | 82096702 | 82096869 | 82096702 | ID=MS.gene037539.t1.exon4;Parent=MS.gene037539.t1 |
chr4.3 | CDS | 82096702 | 82096869 | 82096702 | ID=cds.MS.gene037539.t1;Parent=MS.gene037539.t1 |
Gene Sequence |
Protein sequence |