AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene84597


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene84597.t1 MTR_7g066340 79.070 473 98 1 1 472 1 473 0.0 748
MS.gene84597.t1 MTR_7g066310 66.810 464 90 2 9 472 4 403 0.0 595
MS.gene84597.t1 MTR_7g066350 63.383 467 151 8 1 456 1 458 0.0 549
MS.gene84597.t1 MTR_7g066280 66.435 432 73 2 91 472 1 410 0.0 542
MS.gene84597.t1 MTR_7g066260 58.078 489 181 10 6 476 9 491 5.24e-180 520
MS.gene84597.t1 MTR_1g041315 59.955 447 158 6 7 436 9 451 5.77e-176 510
MS.gene84597.t1 MTR_7g066570 52.206 544 205 12 3 510 5 529 2.91e-162 478
MS.gene84597.t1 MTR_7g066400 54.584 469 158 8 1 449 1 434 2.22e-158 463
MS.gene84597.t1 MTR_7g066360 53.586 474 189 10 6 466 8 463 8.82e-147 435
MS.gene84597.t1 MTR_7g012680 52.431 473 182 9 3 458 5 451 4.09e-145 430
MS.gene84597.t1 MTR_7g066290 54.902 459 163 11 6 453 9 434 3.65e-144 427
MS.gene84597.t1 MTR_7g058710 49.797 492 192 8 1 452 1 477 1.95e-140 419
MS.gene84597.t1 MTR_7g066580 45.935 492 170 11 18 458 1 447 2.88e-123 374
MS.gene84597.t1 MTR_7g058700 47.427 447 161 7 24 452 531 921 2.61e-112 359
MS.gene84597.t1 MTR_2g029400 45.319 470 148 10 6 440 8 403 3.17e-110 338
MS.gene84597.t1 MTR_7g066430 40.574 488 237 8 12 452 4 485 2.51e-107 334
MS.gene84597.t1 MTR_7g066430 28.511 235 147 7 9 231 254 479 2.40e-15 79.7
MS.gene84597.t1 MTR_7g066410 39.961 508 231 11 13 452 11 512 1.52e-106 333
MS.gene84597.t1 MTR_7g066410 29.958 237 135 8 12 231 284 506 1.05e-16 84.0
MS.gene84597.t1 MTR_7g066480 39.207 454 221 8 11 454 15 423 1.21e-89 286
MS.gene84597.t1 MTR_7g066490 39.821 447 212 9 12 454 16 409 2.47e-85 274
MS.gene84597.t1 MTR_7g062280 35.700 493 262 10 5 452 3 485 1.66e-84 274
MS.gene84597.t1 MTR_7g063660 34.969 489 254 12 7 452 4 471 2.87e-84 273
MS.gene84597.t1 MTR_7g062300 36.402 478 265 11 1 448 1 469 1.27e-83 271
MS.gene84597.t1 MTR_7g063820 37.120 493 248 12 5 452 3 478 3.35e-83 271
MS.gene84597.t1 MTR_7g063900 39.712 486 235 14 12 452 10 482 4.66e-82 268
MS.gene84597.t1 MTR_7g063900 26.230 244 141 9 265 471 13 254 2.96e-12 69.7
MS.gene84597.t1 MTR_7g063880 36.364 484 249 14 5 453 4 463 2.06e-81 265
MS.gene84597.t1 MTR_7g063830 35.974 467 255 10 1 452 1 438 3.57e-78 256
MS.gene84597.t1 MTR_7g063890 38.636 484 244 11 11 452 26 498 1.89e-77 256
MS.gene84597.t1 MTR_4g019310 35.070 499 254 12 6 448 2 486 3.34e-77 255
MS.gene84597.t1 MTR_4g019310 30.603 232 140 11 13 234 267 487 9.47e-14 74.7
MS.gene84597.t1 MTR_7g063840 34.927 481 270 11 1 452 1 467 3.22e-75 249
MS.gene84597.t1 MTR_3g007740 37.419 465 238 14 11 452 8 442 1.22e-74 247
MS.gene84597.t1 MTR_7g063920 34.656 479 237 10 1 452 1 430 8.67e-74 244
MS.gene84597.t1 MTR_4g017830 33.017 527 274 14 1 463 1 512 6.93e-72 242
MS.gene84597.t1 MTR_4g017440 32.941 510 264 14 6 452 8 502 5.93e-69 233
MS.gene84597.t1 MTR_4g019340 34.172 477 255 11 13 442 39 503 6.00e-68 231
MS.gene84597.t1 MTR_4g019340 26.047 215 144 4 12 226 303 502 9.59e-12 68.2
MS.gene84597.t1 MTR_3g065200 34.194 465 214 12 10 439 1 408 2.32e-67 228
MS.gene84597.t1 MTR_7g066680 46.154 299 98 6 214 449 37 335 1.71e-66 222
MS.gene84597.t1 MTR_7g066680 25.943 212 141 8 6 210 80 282 4.83e-11 65.1
MS.gene84597.t1 MTR_7g063670 34.725 455 263 10 13 452 16 451 2.12e-65 223
MS.gene84597.t1 MTR_1g014060 53.182 220 95 4 21 237 9 223 3.21e-65 220
MS.gene84597.t1 MTR_1g014060 41.589 214 104 5 259 458 184 390 1.79e-35 138
MS.gene84597.t1 MTR_4g017610 33.194 479 258 15 15 449 16 476 2.09e-64 221
MS.gene84597.t1 MTR_4g017410 33.065 496 269 17 6 452 3 484 2.38e-62 216
MS.gene84597.t1 MTR_4g017470 29.767 514 255 11 1 452 1 470 3.84e-53 190
MS.gene84597.t1 MTR_4g017470 27.386 241 144 7 255 477 5 232 1.33e-11 67.8
MS.gene84597.t1 MTR_7g066390 57.595 158 39 1 303 460 1 130 9.06e-50 171
MS.gene84597.t1 MTR_4g017550 30.169 474 241 19 41 448 20 469 1.32e-42 160
MS.gene84597.t1 MTR_7g063720 37.143 210 119 3 256 452 17 226 2.08e-35 134
MS.gene84597.t1 MTR_7g063720 29.185 233 134 10 2 231 16 220 2.83e-17 82.0
MS.gene84597.t1 MTR_7g062270 36.782 174 109 1 13 186 11 183 1.66e-29 121
MS.gene84597.t1 MTR_7g100420 35.897 273 132 8 214 452 134 397 1.38e-26 113
MS.gene84597.t1 MTR_2g067310 41.618 173 61 6 23 195 58 190 3.24e-26 108
MS.gene84597.t1 MTR_8g023240 23.902 569 354 17 13 543 38 565 2.53e-25 111
MS.gene84597.t1 MTR_7g063690 31.655 278 121 9 13 289 13 222 2.66e-25 105
MS.gene84597.t1 MTR_1g115440 33.600 250 140 9 1 236 1 238 1.44e-24 103
MS.gene84597.t1 MTR_8g445860 29.918 244 151 6 4 237 5 238 4.04e-24 102
MS.gene84597.t1 MTR_8g445860 29.279 222 120 5 260 445 11 231 7.00e-20 89.7
MS.gene84597.t1 MTR_0150s0010 31.102 254 140 8 1 236 1 237 6.73e-21 92.8
MS.gene84597.t1 MTR_0150s0010 30.222 225 117 5 260 445 8 231 1.51e-19 89.0
MS.gene84597.t1 MTR_4g019240 39.423 104 51 4 13 108 14 113 1.23e-14 73.2
MS.gene84597.t1 MTR_1g115455 26.721 247 150 7 6 237 3 233 1.73e-14 73.9
MS.gene84597.t1 MTR_1g115450 40.000 90 49 1 7 96 2 86 6.48e-14 69.7
MS.gene84597.t1 MTR_1g115470 42.857 91 47 1 12 102 6 91 2.27e-13 73.2
MS.gene84597.t1 MTR_1g115435 27.347 245 143 9 7 245 2 217 5.35e-12 66.2
MS.gene84597.t1 MTR_0150s0030 37.363 91 51 2 6 95 2 87 1.81e-11 64.3
MS.gene84597.t1 MTR_7g063850 24.675 231 137 9 15 231 69 276 3.09e-11 65.1
MS.gene84597.t1 MTR_7g063760 43.939 66 36 1 388 452 2 67 5.46e-11 59.3
MS.gene84597.t1 MTR_8g044880 37.113 97 55 2 6 101 2 93 5.66e-11 64.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene84597.t1 AT3G09140 31.176 510 284 16 1 456 1 497 3.77e-59 207
MS.gene84597.t1 AT3G09140 29.478 536 287 16 1 456 1 525 3.68e-55 197
MS.gene84597.t1 AT5G01120 30.083 482 285 11 13 448 10 485 4.34e-55 196
MS.gene84597.t1 AT5G01150 30.247 486 285 12 12 455 9 482 2.49e-54 194
MS.gene84597.t1 AT5G01140 29.079 478 291 9 12 464 9 463 4.55e-54 192
MS.gene84597.t1 AT5G43240 29.651 516 299 14 13 477 10 512 1.03e-49 181
MS.gene84597.t1 AT5G43240 29.651 516 299 14 13 477 10 512 1.03e-49 181
MS.gene84597.t1 AT5G43240 29.651 516 299 14 13 477 10 512 1.03e-49 181
MS.gene84597.t1 AT3G09110 32.817 323 201 7 12 327 9 322 1.81e-48 174
MS.gene84597.t1 AT5G01130 30.608 477 273 14 1 452 1 444 5.05e-47 172
MS.gene84597.t1 AT3G09120 31.646 316 199 7 11 316 5 313 4.31e-39 147
MS.gene84597.t1 AT5G37320 27.545 501 295 19 3 455 2 482 7.61e-38 147
MS.gene84597.t1 AT5G43240 28.485 330 183 10 163 448 25 345 4.77e-21 95.9

Find 116 sgRNAs with CRISPR-Local

Find 284 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TAGAGCACCATTAACGTTTA+TGG 0.174129 7.3:+39276578 MS.gene84597:CDS
CAATGTTCAGTTTCATATTC+TGG 0.191679 7.3:-39275642 None:intergenic
CAATTTCATTACTCAAATTC+TGG 0.194815 7.3:-39275795 None:intergenic
GATCCTAAATCCCCTATTTC+TGG 0.194829 7.3:+39276546 MS.gene84597:CDS
CTAGCATATCCTCCAGAAAT+AGG 0.222209 7.3:-39276558 None:intergenic
CAGAATTTGAGTAATGAAAT+TGG 0.244591 7.3:+39275796 MS.gene84597:CDS
TGAGCACCTGCTGAGTTTCT+TGG 0.253622 7.3:-39275616 None:intergenic
CCTCCAGAAATAGGGGATTT+AGG 0.261981 7.3:-39276549 None:intergenic
AAGAAAAGATACCTCTTTCT+TGG 0.262602 7.3:-39275965 None:intergenic
AACAGTACTTTGTTTGAGTT+TGG 0.269045 7.3:-39279874 None:intergenic
CAAGGTTACCATTAGAGTTT+TGG 0.279997 7.3:+39275366 MS.gene84597:CDS
TGATCTTCTCAAATTGTCTT+TGG 0.284928 7.3:+39276080 MS.gene84597:CDS
GATACCTTGTAACGATTATA+AGG 0.318916 7.3:+39276497 MS.gene84597:CDS
GAGGAAATTGTCGTTAATAT+TGG 0.320848 7.3:+39276687 MS.gene84597:CDS
CTTGGTGATGTTGATATTAA+CGG 0.332558 7.3:-39275947 None:intergenic
AAAGTTGTCGTAACAACATT+TGG 0.340302 7.3:-39275871 None:intergenic
AATACTGTGTAAGTTTCTTC+AGG 0.340897 7.3:+39275728 MS.gene84597:CDS
CGCCAAAACTTTGTTGGTGT+TGG 0.343224 7.3:-39280038 None:intergenic
TCCCAACACCAACAAAGTTT+TGG 0.348303 7.3:+39280036 MS.gene84597:CDS
GAGAACAAGACTTGCAGAAT+TGG 0.357185 7.3:+39275700 MS.gene84597:CDS
TCAAAATTTGCTTTGACAAA+CGG 0.362323 7.3:+39276838 MS.gene84597:CDS
TAGCATATCCTCCAGAAATA+GGG 0.363628 7.3:-39276557 None:intergenic
TCCAACCATAGCTTCATATC+TGG 0.364682 7.3:-39279743 None:intergenic
GAACTTCCGCCACCACTATA+CGG 0.369037 7.3:+39279791 MS.gene84597:CDS
TTAACCTCCATTCGGTTACT+TGG 0.371862 7.3:-39276165 None:intergenic
ATCACATTGTTTGTGATAGT+TGG 0.377421 7.3:-39279903 None:intergenic
TAAATTATCAATGCAGCTTA+AGG 0.378298 7.3:-39276358 None:intergenic
AACCACCATCAACATAGATT+TGG 0.380923 7.3:-39278034 None:intergenic
GCCAAAACTTTGTTGGTGTT+GGG 0.390181 7.3:-39280037 None:intergenic
AACGGCCTCAACCAGTTCAT+TGG 0.391379 7.3:+39276856 MS.gene84597:CDS
GCTTCTTAACATTGCGCTTA+GGG 0.394593 7.3:+39275455 MS.gene84597:CDS
TAGTCTTCTCACCTTTCCCT+TGG 0.396323 7.3:+39276302 MS.gene84597:CDS
TCAAATTCTGGAATTCTTCT+CGG 0.402305 7.3:-39275783 None:intergenic
TTAAATCTCCTTCAGAAGCT+TGG 0.404186 7.3:+39275892 MS.gene84597:CDS
AACCGAATGGAGGTTAATAT+TGG 0.408331 7.3:+39276171 MS.gene84597:CDS
GGCAGGAAGTAGATCTGTTC+AGG 0.408889 7.3:+39277314 MS.gene84597:intron
GAGATTCGCCAAAACTTTGT+TGG 0.411361 7.3:-39280044 None:intergenic
TCTGTCACCATAAACGTTAA+TGG 0.411866 7.3:-39276585 None:intergenic
TACAAGGTATCGGTAATATC+TGG 0.416442 7.3:-39276485 None:intergenic
AGCTTCTTAACATTGCGCTT+AGG 0.417921 7.3:+39275454 MS.gene84597:CDS
AGTCTTCTCACCTTTCCCTT+GGG 0.418372 7.3:+39276303 MS.gene84597:CDS
ATCAACCAAATCTATGTTGA+TGG 0.421611 7.3:+39278029 MS.gene84597:CDS
AAGATATGAAATACCATCAA+TGG 0.434003 7.3:-39276634 None:intergenic
TACTATACTAACCAATGAAC+TGG 0.434085 7.3:-39276867 None:intergenic
AAATGCTTGGAATAGTTAGT+AGG 0.436434 7.3:-39276440 None:intergenic
CTTGTCCACCAAAACTCTAA+TGG 0.440326 7.3:-39275374 None:intergenic
TGAGCTCAGAAAAGTGCTTA+AGG 0.445205 7.3:+39276400 MS.gene84597:CDS
CCACCTCCTCTTGTTTCGAA+TGG 0.449856 7.3:+39279971 MS.gene84597:CDS
TCTATTTGCTGAGGCAGATA+AGG 0.457603 7.3:+39275411 MS.gene84597:CDS
AAAGGAAGAATCTAACGAAA+TGG 0.460633 7.3:+39276200 MS.gene84597:CDS
TACCAATATTAACCTCCATT+CGG 0.462117 7.3:-39276173 None:intergenic
CACATTGTGTACCAACAATC+TGG 0.462685 7.3:-39277933 None:intergenic
CAGAAATAACGTCACTTACA+AGG 0.471169 7.3:+39277977 MS.gene84597:CDS
CGCAGATTGAATCCGTATAG+TGG 0.478916 7.3:-39279803 None:intergenic
ATTTCCTCCACATCATTAAG+TGG 0.479406 7.3:-39276672 None:intergenic
ATGAAGCTATGGTTGGAGCT+AGG 0.480465 7.3:+39279749 MS.gene84597:CDS
CTTACCTTATAATCGTTACA+AGG 0.487269 7.3:-39276501 None:intergenic
ACTCCAATGCCATCCATTGA+TGG 0.490084 7.3:+39276621 MS.gene84597:CDS
GTTCGTGAGTTCAGACTGTA+TGG 0.490803 7.3:-39276463 None:intergenic
GGTTAATATTGGTAAAGAAA+AGG 0.492157 7.3:+39276182 MS.gene84597:CDS
AGGAATCAGAAATGTATTTG+TGG 0.500975 7.3:+39275748 MS.gene84597:CDS
CTTCTCACCTTTCCCTTGGG+AGG 0.505145 7.3:+39276306 MS.gene84597:CDS
GCATTGGAGTCACAACCAAC+TGG 0.508849 7.3:-39276608 None:intergenic
CAAGACCAAGGCCAGATTGT+TGG 0.515955 7.3:+39277922 MS.gene84597:CDS
CATCCAGCAGTATCATCATT+AGG 0.516253 7.3:-39277847 None:intergenic
GATCTTGTTTATTGAAGCAG+AGG 0.517035 7.3:+39276257 MS.gene84597:CDS
CAGCCTAATGATGATACTGC+TGG 0.517497 7.3:+39277844 MS.gene84597:intron
TGAAGCTATGGTTGGAGCTA+GGG 0.520942 7.3:+39279750 MS.gene84597:CDS
TAACCTCCATTCGGTTACTT+GGG 0.521189 7.3:-39276164 None:intergenic
GTGTACCAACAATCTGGCCT+TGG 0.521461 7.3:-39277927 None:intergenic
TATCAACATCACCAAGAAAG+AGG 0.532453 7.3:+39275954 MS.gene84597:CDS
TCAGACTGTATGGAAATGCT+TGG 0.540758 7.3:-39276453 None:intergenic
CTTGTTCTCACAGCAGAAGT+AGG 0.541416 7.3:-39275686 None:intergenic
ATACCATCAATGGATGGCAT+TGG 0.542259 7.3:-39276624 None:intergenic
TCCAGATATGAAGCTATGGT+TGG 0.543618 7.3:+39279742 MS.gene84597:CDS
ATAGCTTCATATCTGGAACT+TGG 0.550486 7.3:-39279736 None:intergenic
GGAGCTAGGGCGAAGAACAT+TGG 0.555509 7.3:+39279763 MS.gene84597:CDS
CCATTCGAAACAAGAGGAGG+TGG 0.555852 7.3:-39279971 None:intergenic
TTATAATCGTTACAAGGTAT+CGG 0.556667 7.3:-39276495 None:intergenic
TGTCGTTAATATTGGCCTGA+AGG 0.557303 7.3:+39276695 MS.gene84597:CDS
CATTGACTCCAAGCTTCTGA+AGG 0.561296 7.3:-39275900 None:intergenic
AATGATGATACTGCTGGATG+TGG 0.562722 7.3:+39277850 MS.gene84597:CDS
TTTAGTCCCAAGTAACCGAA+TGG 0.566006 7.3:+39276158 MS.gene84597:CDS
ATCAATCCAAGAAACTCAGC+AGG 0.567136 7.3:+39275610 MS.gene84597:CDS
ACTAACCAATGAACTGGTTG+AGG 0.567961 7.3:-39276861 None:intergenic
AAGTTCCAGATATGAAGCTA+TGG 0.571163 7.3:+39279738 MS.gene84597:CDS
TTGAATCCGTATAGTGGTGG+CGG 0.572563 7.3:-39279797 None:intergenic
TAACACTCCTCCCAAGGGAA+AGG 0.572666 7.3:-39276313 None:intergenic
AGCATATCCTCCAGAAATAG+GGG 0.573043 7.3:-39276556 None:intergenic
CTCAGCAAAACAAGTAGACA+AGG 0.581182 7.3:+39275348 MS.gene84597:CDS
GCTTCATATCTGGAACTTGG+TGG 0.581888 7.3:-39279733 None:intergenic
TCTCACAGCAGAAGTAGGAC+TGG 0.581921 7.3:-39275681 None:intergenic
CATATGTAACACTCCTCCCA+AGG 0.585037 7.3:-39276319 None:intergenic
CGTTAATATTGGCCTGAAGG+AGG 0.600026 7.3:+39276698 MS.gene84597:CDS
TATGAAATACCATCAATGGA+TGG 0.601386 7.3:-39276630 None:intergenic
AAATAAAGTTCTATTTGCTG+AGG 0.602370 7.3:+39275402 MS.gene84597:CDS
GTTTATGGTGACAGACCAGT+TGG 0.602694 7.3:+39276593 MS.gene84597:CDS
AGGGACCATTGCAAAACTTG+TGG 0.604088 7.3:+39275474 MS.gene84597:CDS
GAACGTCCCACTTAATGATG+TGG 0.609331 7.3:+39276665 MS.gene84597:CDS
ACAGCAGAAGTAGGACTGGA+AGG 0.610171 7.3:-39275677 None:intergenic
GATTCGCCATTCGAAACAAG+AGG 0.611339 7.3:-39279977 None:intergenic
AAGCTTGGAGTCAATGACAT+TGG 0.612687 7.3:+39275907 MS.gene84597:CDS
CGTCCCACTTAATGATGTGG+AGG 0.619494 7.3:+39276668 MS.gene84597:CDS
TTAAATATAAAGTCTGACAG+AGG 0.620186 7.3:-39276114 None:intergenic
ACAAGAGGAGGTGGAACTCG+CGG 0.624056 7.3:-39279962 None:intergenic
TTTCCTCCACATCATTAAGT+GGG 0.624477 7.3:-39276671 None:intergenic
CCTAAATCCCCTATTTCTGG+AGG 0.628731 7.3:+39276549 MS.gene84597:CDS
AGTCCCAAGTAACCGAATGG+AGG 0.634833 7.3:+39276161 MS.gene84597:CDS
AGATTGAATCCGTATAGTGG+TGG 0.662110 7.3:-39279800 None:intergenic
ATATGTAACACTCCTCCCAA+GGG 0.664294 7.3:-39276318 None:intergenic
ATGTGTTGAATGTTGCAAGA+AGG 0.665559 7.3:+39277951 MS.gene84597:CDS
AAAGTTGAAGGTCAAGACCA+AGG 0.676584 7.3:+39277910 MS.gene84597:CDS
GGAGTGTTACATATGCTCGA+AGG 0.683354 7.3:+39276327 MS.gene84597:CDS
TCTATGGTCACAGACATGCA+AGG 0.694458 7.3:+39275579 MS.gene84597:CDS
TTTGGCGAATCTCATGACAA+GGG 0.701133 7.3:+39280054 MS.gene84597:CDS
TCGCCATTCGAAACAAGAGG+AGG 0.708171 7.3:-39279974 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTGTTATAATTATTATGT+AGG - chr7.3:39276914-39276933 None:intergenic 10.0%
!!! AATTTTCAAAAGTTTCAAAT+TGG - chr7.3:39278432-39278451 None:intergenic 15.0%
!!! TTGAAACTTTTGAAAATTAA+AGG + chr7.3:39278434-39278453 MS.gene84597:intron 15.0%
!! AAAAAATCAACAAAAGTTGA+AGG + chr7.3:39277898-39277917 MS.gene84597:CDS 20.0%
!! AAACAAGTTATTAGTTAGAA+TGG - chr7.3:39277810-39277829 None:intergenic 20.0%
!! AAATAATTAGTTAGAGAAGT+TGG - chr7.3:39278690-39278709 None:intergenic 20.0%
!! AACAAGTTATTAGTTAGAAT+GGG - chr7.3:39277809-39277828 None:intergenic 20.0%
!! AATACATGAATTTGGTAAAA+AGG - chr7.3:39277562-39277581 None:intergenic 20.0%
!! ATATCATCACTTTAAATTGT+TGG - chr7.3:39278100-39278119 None:intergenic 20.0%
!! ATCTTGATGAAAAATATCTA+TGG + chr7.3:39275563-39275582 MS.gene84597:CDS 20.0%
!! ATGAATAGTAGTTGAATTAA+AGG - chr7.3:39278786-39278805 None:intergenic 20.0%
!! GAAATGATTTACAAACTAAA+AGG + chr7.3:39278405-39278424 MS.gene84597:intron 20.0%
!! TAACGATAATTATATAACTG+AGG - chr7.3:39277606-39277625 None:intergenic 20.0%
!! TATAATTATTATGTAGGATG+AGG - chr7.3:39276908-39276927 None:intergenic 20.0%
!!! ATTTTTGTGTTTGAAATATG+TGG + chr7.3:39277412-39277431 MS.gene84597:intron 20.0%
!!! CTTCAATATGTTGTTTAAAT+AGG + chr7.3:39276053-39276072 MS.gene84597:intron 20.0%
!!! TAATGAAATTGGTTTTGTTA+AGG + chr7.3:39275807-39275826 MS.gene84597:CDS 20.0%
! AAAAATTCAGACTATAACTC+CGG + chr7.3:39279635-39279654 MS.gene84597:intron 25.0%
! AAGATATGAAATACCATCAA+TGG - chr7.3:39276637-39276656 None:intergenic 25.0%
! AAGTGATGATATACATATGA+TGG + chr7.3:39278108-39278127 MS.gene84597:intron 25.0%
! ATCGTAACAGAAAACAATTA+TGG - chr7.3:39279690-39279709 None:intergenic 25.0%
! CAAACACAAAAATAGAAACA+TGG - chr7.3:39277405-39277424 None:intergenic 25.0%
! CAATTTCATTACTCAAATTC+TGG - chr7.3:39275798-39275817 None:intergenic 25.0%
! CAGAATTTGAGTAATGAAAT+TGG + chr7.3:39275796-39275815 MS.gene84597:CDS 25.0%
! GAAAATTAAAGGACTAACTT+GGG + chr7.3:39278445-39278464 MS.gene84597:intron 25.0%
! GGTTAATATTGGTAAAGAAA+AGG + chr7.3:39276182-39276201 MS.gene84597:CDS 25.0%
! GTGATCAAAATACATGAATT+TGG - chr7.3:39277570-39277589 None:intergenic 25.0%
! TAAATTATCAATGCAGCTTA+AGG - chr7.3:39276361-39276380 None:intergenic 25.0%
! TAAGTGAATTGCAATTCTAT+TGG + chr7.3:39278593-39278612 MS.gene84597:intron 25.0%
! TAGAAAAAGAAGAGAAGTAA+AGG + chr7.3:39277193-39277212 MS.gene84597:intron 25.0%
! TGAAAATTAAAGGACTAACT+TGG + chr7.3:39278444-39278463 MS.gene84597:intron 25.0%
! TGAACATGCACATATAATAA+AGG - chr7.3:39277293-39277312 None:intergenic 25.0%
! TTAAATATAAAGTCTGACAG+AGG - chr7.3:39276117-39276136 None:intergenic 25.0%
! TTATAATCGTTACAAGGTAT+CGG - chr7.3:39276498-39276517 None:intergenic 25.0%
! TTATCGTTATTTATGTGACA+AGG + chr7.3:39277617-39277636 MS.gene84597:intron 25.0%
! TTATTATATGTGCATGTTCA+TGG + chr7.3:39277293-39277312 MS.gene84597:intron 25.0%
!! AAATAAAGTTCTATTTGCTG+AGG + chr7.3:39275402-39275421 MS.gene84597:CDS 25.0%
!! GAGTTATAGTCTGAATTTTT+GGG - chr7.3:39279635-39279654 None:intergenic 25.0%
!! TCAAAATTTGCTTTGACAAA+CGG + chr7.3:39276838-39276857 MS.gene84597:CDS 25.0%
!! TTTTTCATTGCTCTTAATCT+TGG - chr7.3:39278010-39278029 None:intergenic 25.0%
!!! AATTTTTGGGAATAATGTAG+TGG - chr7.3:39279622-39279641 None:intergenic 25.0%
AAAGGAAGAATCTAACGAAA+TGG + chr7.3:39276200-39276219 MS.gene84597:CDS 30.0%
AAAGGAATTGAGAAATTGAG+AGG + chr7.3:39278561-39278580 MS.gene84597:intron 30.0%
AAAGTTGTCGTAACAACATT+TGG - chr7.3:39275874-39275893 None:intergenic 30.0%
AAATGCTTGGAATAGTTAGT+AGG - chr7.3:39276443-39276462 None:intergenic 30.0%
AAGAAAAGATACCTCTTTCT+TGG - chr7.3:39275968-39275987 None:intergenic 30.0%
AAGGAATTGAGAAATTGAGA+GGG + chr7.3:39278562-39278581 MS.gene84597:intron 30.0%
AATACTGTGTAAGTTTCTTC+AGG + chr7.3:39275728-39275747 MS.gene84597:CDS 30.0%
AATGAATGGTACCCATATAT+GGG + chr7.3:39277091-39277110 MS.gene84597:intron 30.0%
AATTCATCTTCTTGTTCTGA+GGG + chr7.3:39279277-39279296 MS.gene84597:intron 30.0%
AGGAATCAGAAATGTATTTG+TGG + chr7.3:39275748-39275767 MS.gene84597:CDS 30.0%
ATATGAACATCCCCATATAT+GGG - chr7.3:39277105-39277124 None:intergenic 30.0%
ATCAACCAAATCTATGTTGA+TGG + chr7.3:39278029-39278048 MS.gene84597:CDS 30.0%
ATCACATTGTTTGTGATAGT+TGG - chr7.3:39279906-39279925 None:intergenic 30.0%
ATGGAAGTTTAATAGATCCA+TGG - chr7.3:39277776-39277795 None:intergenic 30.0%
CAACCACAAGAAATCAAATA+TGG - chr7.3:39276785-39276804 None:intergenic 30.0%
CAATGTTCAGTTTCATATTC+TGG - chr7.3:39275645-39275664 None:intergenic 30.0%
CAATTTAAACAGATAACCTG+TGG + chr7.3:39279198-39279217 MS.gene84597:intron 30.0%
CGATAATTATATAACTGAGG+TGG - chr7.3:39277603-39277622 None:intergenic 30.0%
CTAATAAGACATGACAATAG+AGG - chr7.3:39277523-39277542 None:intergenic 30.0%
CTTACCTTATAATCGTTACA+AGG - chr7.3:39276504-39276523 None:intergenic 30.0%
GAAATATGCAAAAGAAGTCA+TGG - chr7.3:39279470-39279489 None:intergenic 30.0%
GAGGAAATTGTCGTTAATAT+TGG + chr7.3:39276687-39276706 MS.gene84597:CDS 30.0%
GATAAGTCTGCTATAAATCT+AGG - chr7.3:39279007-39279026 None:intergenic 30.0%
GATACCTTGTAACGATTATA+AGG + chr7.3:39276497-39276516 MS.gene84597:CDS 30.0%
GTAACAGAAAACAATTATGG+CGG - chr7.3:39279687-39279706 None:intergenic 30.0%
TAATTAGTTAGAGAAGTTGG+TGG - chr7.3:39278687-39278706 None:intergenic 30.0%
TACCAATATTAACCTCCATT+CGG - chr7.3:39276176-39276195 None:intergenic 30.0%
TACTATACTAACCAATGAAC+TGG - chr7.3:39276870-39276889 None:intergenic 30.0%
TACTTCTTGAGAAAGACTAA+GGG + chr7.3:39277488-39277507 MS.gene84597:intron 30.0%
TAGTACTACACATAACAAGT+CGG - chr7.3:39277054-39277073 None:intergenic 30.0%
TATGAAATACCATCAATGGA+TGG - chr7.3:39276633-39276652 None:intergenic 30.0%
TATGTATTCTTCTTCACATG+AGG + chr7.3:39279123-39279142 MS.gene84597:intron 30.0%
TGATCTTCTCAAATTGTCTT+TGG + chr7.3:39276080-39276099 MS.gene84597:CDS 30.0%
TGTGAAGAAGAATACATATC+TGG - chr7.3:39279121-39279140 None:intergenic 30.0%
TTACTTCTTGAGAAAGACTA+AGG + chr7.3:39277487-39277506 MS.gene84597:intron 30.0%
! AACAGTACTTTGTTTGAGTT+TGG - chr7.3:39279877-39279896 None:intergenic 30.0%
! ATACATATCTGGTTCATATG+CGG - chr7.3:39279110-39279129 None:intergenic 30.0%
! CTCTAAGGAACTAAAATGAA+AGG + chr7.3:39278543-39278562 MS.gene84597:intron 30.0%
! GGAGTTATAGTCTGAATTTT+TGG - chr7.3:39279636-39279655 None:intergenic 30.0%
! GTAACAACTGATTCAATATC+TGG - chr7.3:39277728-39277747 None:intergenic 30.0%
! GTTTGTCAAAGCAAATTTTG+AGG - chr7.3:39276839-39276858 None:intergenic 30.0%
! TCACCATATTTGATTTCTTG+TGG + chr7.3:39276779-39276798 MS.gene84597:intron 30.0%
! TGAATTAAAGGAGCATACAA+TGG - chr7.3:39278774-39278793 None:intergenic 30.0%
! TGTGTAGTACTAATTTTCCA+TGG + chr7.3:39277062-39277081 MS.gene84597:intron 30.0%
! TTCTACCTTTTGCATCTTTA+GGG - chr7.3:39277364-39277383 None:intergenic 30.0%
! TTTCTACCTTTTGCATCTTT+AGG - chr7.3:39277365-39277384 None:intergenic 30.0%
!! CTTGGTGATGTTGATATTAA+CGG - chr7.3:39275950-39275969 None:intergenic 30.0%
!! TCAAATTCTGGAATTCTTCT+CGG - chr7.3:39275786-39275805 None:intergenic 30.0%
!!! AATTTTGAAGCATTGAGCTT+TGG + chr7.3:39275508-39275527 MS.gene84597:CDS 30.0%
!!! ACAGTTGTGAGATTTTGATT+CGG - chr7.3:39280010-39280029 None:intergenic 30.0%
!!! ATAGACATGTTTTTAGACCT+TGG - chr7.3:39278838-39278857 None:intergenic 30.0%
!!! GTTGATTTTTTGTTGTCTGA+AGG - chr7.3:39277889-39277908 None:intergenic 30.0%
!!! TAGACATGTTTTTAGACCTT+GGG - chr7.3:39278837-39278856 None:intergenic 30.0%
!!! TGGTTTTGTTAAGGAAATGT+CGG + chr7.3:39275816-39275835 MS.gene84597:CDS 30.0%
AAAGGCAAAAGATGCAAACT+AGG - chr7.3:39278287-39278306 None:intergenic 35.0%
AACACATCTGCTCTATTCAA+GGG - chr7.3:39278333-39278352 None:intergenic 35.0%
AACCACCATCAACATAGATT+TGG - chr7.3:39278037-39278056 None:intergenic 35.0%
AACCGAATGGAGGTTAATAT+TGG + chr7.3:39276171-39276190 MS.gene84597:CDS 35.0%
AAGTCATGGAAAGTTCGATA+TGG - chr7.3:39279456-39279475 None:intergenic 35.0%
AAGTTCCAGATATGAAGCTA+TGG + chr7.3:39279738-39279757 MS.gene84597:CDS 35.0%
ACTTCTTGAGAAAGACTAAG+GGG + chr7.3:39277489-39277508 MS.gene84597:intron 35.0%
AGGAAGAAAGATTGAACGAA+AGG + chr7.3:39277213-39277232 MS.gene84597:intron 35.0%
ATCAGTTGTTACTGAATGAG+AGG + chr7.3:39277736-39277755 MS.gene84597:intron 35.0%
ATCTGTTTAACAGAGACTGA+CGG + chr7.3:39278369-39278388 MS.gene84597:intron 35.0%
ATGAATGGTACCCATATATG+GGG + chr7.3:39277092-39277111 MS.gene84597:intron 35.0%
ATGTGTTGAATGTTGCAAGA+AGG + chr7.3:39277951-39277970 MS.gene84597:CDS 35.0%
ATTTCCTCCACATCATTAAG+TGG - chr7.3:39276675-39276694 None:intergenic 35.0%
CAACTGCTTCAATCTCAAAA+AGG - chr7.3:39278305-39278324 None:intergenic 35.0%
CAATGAATGGTACCCATATA+TGG + chr7.3:39277090-39277109 MS.gene84597:intron 35.0%
CAGAAATAACGTCACTTACA+AGG + chr7.3:39277977-39277996 MS.gene84597:CDS 35.0%
CATATGAACATCCCCATATA+TGG - chr7.3:39277106-39277125 None:intergenic 35.0%
CATATGATCTTAGGGTAATG+AGG + chr7.3:39277120-39277139 MS.gene84597:intron 35.0%
CTCTAATTTCTTAGTGCTCA+AGG - chr7.3:39279171-39279190 None:intergenic 35.0%
CTTGCGCTCACAAAAAATAA+AGG - chr7.3:39278509-39278528 None:intergenic 35.0%
GAAACTAAAAGGACCAAAAG+TGG + chr7.3:39278476-39278495 MS.gene84597:intron 35.0%
GAATTCATCTTCTTGTTCTG+AGG + chr7.3:39279276-39279295 MS.gene84597:intron 35.0%
GATTGCAGACATACTAACTA+AGG - chr7.3:39278869-39278888 None:intergenic 35.0%
GGGAATTCTGTGAAACTAAA+AGG + chr7.3:39278465-39278484 MS.gene84597:intron 35.0%
GGGATGTTCATATGATCTTA+GGG + chr7.3:39277112-39277131 MS.gene84597:intron 35.0%
GTTCCTAGAAAATGTCACAT+GGG - chr7.3:39279304-39279323 None:intergenic 35.0%
TACCATTCATTGCATTTCCA+TGG - chr7.3:39277082-39277101 None:intergenic 35.0%
TAGCATATCCTCCAGAAATA+GGG - chr7.3:39276560-39276579 None:intergenic 35.0%
TAGTTAGAATGGGAGAATGA+GGG - chr7.3:39277799-39277818 None:intergenic 35.0%
TATCAACATCACCAAGAAAG+AGG + chr7.3:39275954-39275973 MS.gene84597:CDS 35.0%
TATGGTTGATTGTAGTCATG+TGG - chr7.3:39279438-39279457 None:intergenic 35.0%
TCTGTCACCATAAACGTTAA+TGG - chr7.3:39276588-39276607 None:intergenic 35.0%
TGTTCCTAGAAAATGTCACA+TGG - chr7.3:39279305-39279324 None:intergenic 35.0%
TGTTGTGTGACTGATATATG+TGG + chr7.3:39278190-39278209 MS.gene84597:intron 35.0%
TTAAATCTCCTTCAGAAGCT+TGG + chr7.3:39275892-39275911 MS.gene84597:CDS 35.0%
TTAGTTAGAATGGGAGAATG+AGG - chr7.3:39277800-39277819 None:intergenic 35.0%
TTCCATGGAAATGCAATGAA+TGG + chr7.3:39277077-39277096 MS.gene84597:intron 35.0%
TTTCCTCCACATCATTAAGT+GGG - chr7.3:39276674-39276693 None:intergenic 35.0%
! AACCAAATCTATGTTGATGG+TGG + chr7.3:39278032-39278051 MS.gene84597:intron 35.0%
! AATAGAGCAGATGTGTTGTT+TGG + chr7.3:39278336-39278355 MS.gene84597:intron 35.0%
! ATAGCTTCATATCTGGAACT+TGG - chr7.3:39279739-39279758 None:intergenic 35.0%
! ATTAGCCACAAGTTTTGCAA+TGG - chr7.3:39275482-39275501 None:intergenic 35.0%
! ATTTGATTTCTTGTGGTTGC+AGG + chr7.3:39276786-39276805 MS.gene84597:intron 35.0%
! CAAGGTTACCATTAGAGTTT+TGG + chr7.3:39275366-39275385 MS.gene84597:CDS 35.0%
! GATCTTGTTTATTGAAGCAG+AGG + chr7.3:39276257-39276276 MS.gene84597:CDS 35.0%
! TAAAGGTCGAATACCACTTT+TGG - chr7.3:39278492-39278511 None:intergenic 35.0%
! TAGAGCACCATTAACGTTTA+TGG + chr7.3:39276578-39276597 MS.gene84597:CDS 35.0%
! TCTACCTTTTGCATCTTTAG+GGG - chr7.3:39277363-39277382 None:intergenic 35.0%
! TGAGAGTGATTTTGAATCAC+AGG + chr7.3:39278624-39278643 MS.gene84597:intron 35.0%
! TTTGATTTCTTGTGGTTGCA+GGG + chr7.3:39276787-39276806 MS.gene84597:intron 35.0%
!! GTTTATAAAAGAAGCACCAC+AGG - chr7.3:39279217-39279236 None:intergenic 35.0%
!! TACAAGGTATCGGTAATATC+TGG - chr7.3:39276488-39276507 None:intergenic 35.0%
!! TTTTGGGAATAATGTAGTGG+TGG - chr7.3:39279619-39279638 None:intergenic 35.0%
!!! ATGTAGGATGAGGTTTTGTT+TGG - chr7.3:39276898-39276917 None:intergenic 35.0%
AAAGTCCTATTCTACATGGC+AGG - chr7.3:39278982-39279001 None:intergenic 40.0%
AAAGTTGAAGGTCAAGACCA+AGG + chr7.3:39277910-39277929 MS.gene84597:CDS 40.0%
AAGCTTGGAGTCAATGACAT+TGG + chr7.3:39275907-39275926 MS.gene84597:CDS 40.0%
AAGTCCTATTCTACATGGCA+GGG - chr7.3:39278981-39279000 None:intergenic 40.0%
AATGATGATACTGCTGGATG+TGG + chr7.3:39277850-39277869 MS.gene84597:CDS 40.0%
ACAGAAAACAATTATGGCGG+AGG - chr7.3:39279684-39279703 None:intergenic 40.0%
ACTAACCAATGAACTGGTTG+AGG - chr7.3:39276864-39276883 None:intergenic 40.0%
AGATTGAATCCGTATAGTGG+TGG - chr7.3:39279803-39279822 None:intergenic 40.0%
AGCATATCCTCCAGAAATAG+GGG - chr7.3:39276559-39276578 None:intergenic 40.0%
AGCTTCTTAACATTGCGCTT+AGG + chr7.3:39275454-39275473 MS.gene84597:CDS 40.0%
ATACCATCAATGGATGGCAT+TGG - chr7.3:39276627-39276646 None:intergenic 40.0%
ATATGTAACACTCCTCCCAA+GGG - chr7.3:39276321-39276340 None:intergenic 40.0%
ATCAATCCAAGAAACTCAGC+AGG + chr7.3:39275610-39275629 MS.gene84597:CDS 40.0%
CAACACATCTGCTCTATTCA+AGG - chr7.3:39278334-39278353 None:intergenic 40.0%
CACATTGTGTACCAACAATC+TGG - chr7.3:39277936-39277955 None:intergenic 40.0%
CATCCAGCAGTATCATCATT+AGG - chr7.3:39277850-39277869 None:intergenic 40.0%
CGTAACAAAAATGGTTACGC+CGG - chr7.3:39279657-39279676 None:intergenic 40.0%
CTAGCATATCCTCCAGAAAT+AGG - chr7.3:39276561-39276580 None:intergenic 40.0%
CTCAGCAAAACAAGTAGACA+AGG + chr7.3:39275348-39275367 MS.gene84597:CDS 40.0%
CTTGTCCACCAAAACTCTAA+TGG - chr7.3:39275377-39275396 None:intergenic 40.0%
GAGAACAAGACTTGCAGAAT+TGG + chr7.3:39275700-39275719 MS.gene84597:CDS 40.0%
GAGATTCGCCAAAACTTTGT+TGG - chr7.3:39280047-39280066 None:intergenic 40.0%
GATCCTAAATCCCCTATTTC+TGG + chr7.3:39276546-39276565 MS.gene84597:CDS 40.0%
GATGTGTTTCTTGCACTCTA+AGG + chr7.3:39278528-39278547 MS.gene84597:intron 40.0%
GCTTCTTAACATTGCGCTTA+GGG + chr7.3:39275455-39275474 MS.gene84597:CDS 40.0%
GGAGGAATGCGTAACAAAAA+TGG - chr7.3:39279666-39279685 None:intergenic 40.0%
GGCAAAAGTCCTATTCTACA+TGG - chr7.3:39278986-39279005 None:intergenic 40.0%
GGGAGCAAGTAAACAATGTT+AGG - chr7.3:39278924-39278943 None:intergenic 40.0%
GGGGATGTTCATATGATCTT+AGG + chr7.3:39277111-39277130 MS.gene84597:intron 40.0%
GGGGTAAATACATTGAAGCT+CGG - chr7.3:39278961-39278980 None:intergenic 40.0%
GTAACCACCTCTTATGTGTT+CGG + chr7.3:39277022-39277041 MS.gene84597:intron 40.0%
GTTACTACCGAACACATAAG+AGG - chr7.3:39277032-39277051 None:intergenic 40.0%
GTTGGCAATCAAGCATATTG+TGG - chr7.3:39278082-39278101 None:intergenic 40.0%
TAACCTCCATTCGGTTACTT+GGG - chr7.3:39276167-39276186 None:intergenic 40.0%
TATATGTGCATGTTCATGGC+AGG + chr7.3:39277297-39277316 MS.gene84597:intron 40.0%
TCAGACTGTATGGAAATGCT+TGG - chr7.3:39276456-39276475 None:intergenic 40.0%
TCCAACCATAGCTTCATATC+TGG - chr7.3:39279746-39279765 None:intergenic 40.0%
TCCAGATATGAAGCTATGGT+TGG + chr7.3:39279742-39279761 MS.gene84597:CDS 40.0%
TGATGTCAAGTTTCTTCCCA+AGG + chr7.3:39278818-39278837 MS.gene84597:intron 40.0%
TTAACCTCCATTCGGTTACT+TGG - chr7.3:39276168-39276187 None:intergenic 40.0%
TTAGTGCTCAAGGAAGTAAC+TGG - chr7.3:39279161-39279180 None:intergenic 40.0%
TTGGATCGAATCAGTGCTAA+AGG - chr7.3:39279074-39279093 None:intergenic 40.0%
TTTAGTCCCAAGTAACCGAA+TGG + chr7.3:39276158-39276177 MS.gene84597:CDS 40.0%
TTTGGCGAATCTCATGACAA+GGG + chr7.3:39280054-39280073 MS.gene84597:CDS 40.0%
! AATAATGTAGTGGTGGTGCT+CGG - chr7.3:39279612-39279631 None:intergenic 40.0%
! AGCTCGGTTTTCACTTCTTA+AGG - chr7.3:39278945-39278964 None:intergenic 40.0%
! CTACCTTTTGCATCTTTAGG+GGG - chr7.3:39277362-39277381 None:intergenic 40.0%
! GCCAAAACTTTGTTGGTGTT+GGG - chr7.3:39280040-39280059 None:intergenic 40.0%
! GCTCGGTTTTCACTTCTTAA+GGG - chr7.3:39278944-39278963 None:intergenic 40.0%
! TCCCAACACCAACAAAGTTT+TGG + chr7.3:39280036-39280055 MS.gene84597:CDS 40.0%
! TCTATTTGCTGAGGCAGATA+AGG + chr7.3:39275411-39275430 MS.gene84597:CDS 40.0%
! TGTCGTTAATATTGGCCTGA+AGG + chr7.3:39276695-39276714 MS.gene84597:CDS 40.0%
! TTTTGGCGAATCTCATGACA+AGG + chr7.3:39280053-39280072 MS.gene84597:CDS 40.0%
!! ATGCGGCTTTTCAAGCTATT+TGG - chr7.3:39279093-39279112 None:intergenic 40.0%
!! GATGTGTTGTTTGGTTTGCT+TGG + chr7.3:39278345-39278364 MS.gene84597:intron 40.0%
!! GGTTACCATTAGAGTTTTGG+TGG + chr7.3:39275369-39275388 MS.gene84597:CDS 40.0%
!! TGAGCTCAGAAAAGTGCTTA+AGG + chr7.3:39276400-39276419 MS.gene84597:CDS 40.0%
!!! CTTGTCTACTTGTTTTGCTG+AGG - chr7.3:39275350-39275369 None:intergenic 40.0%
AATAGATCCATGGTCACCCA+TGG - chr7.3:39277766-39277785 None:intergenic 45.0%
ACTACCGAACACATAAGAGG+TGG - chr7.3:39277029-39277048 None:intergenic 45.0%
ACTCCAATGCCATCCATTGA+TGG + chr7.3:39276621-39276640 MS.gene84597:CDS 45.0%
ACTGAATGAGAGGAAAGCCA+TGG + chr7.3:39277746-39277765 MS.gene84597:intron 45.0%
AGGAGAGCAAGCTTCTACAA+CGG - chr7.3:39279544-39279563 None:intergenic 45.0%
AGGGACCATTGCAAAACTTG+TGG + chr7.3:39275474-39275493 MS.gene84597:CDS 45.0%
AGTCCTATTCTACATGGCAG+GGG - chr7.3:39278980-39278999 None:intergenic 45.0%
AGTCTTCTCACCTTTCCCTT+GGG + chr7.3:39276303-39276322 MS.gene84597:CDS 45.0%
ATGAAGCTATGGTTGGAGCT+AGG + chr7.3:39279749-39279768 MS.gene84597:CDS 45.0%
CACACAACACATTCCATCCA+TGG - chr7.3:39278179-39278198 None:intergenic 45.0%
CAGCCTAATGATGATACTGC+TGG + chr7.3:39277844-39277863 MS.gene84597:intron 45.0%
CATATGTAACACTCCTCCCA+AGG - chr7.3:39276322-39276341 None:intergenic 45.0%
CATGCTTCTTTGATGCAGAC+TGG - chr7.3:39279252-39279271 None:intergenic 45.0%
CCTCCAGAAATAGGGGATTT+AGG - chr7.3:39276552-39276571 None:intergenic 45.0%
CGCAGATTGAATCCGTATAG+TGG - chr7.3:39279806-39279825 None:intergenic 45.0%
CGCCAAAACTTTGTTGGTGT+TGG - chr7.3:39280041-39280060 None:intergenic 45.0%
CTAGACTAGCAATCCATGGA+TGG + chr7.3:39278163-39278182 MS.gene84597:intron 45.0%
CTGAATGAGAGGAAAGCCAT+GGG + chr7.3:39277747-39277766 MS.gene84597:intron 45.0%
CTTGTTCTCACAGCAGAAGT+AGG - chr7.3:39275689-39275708 None:intergenic 45.0%
GAACGTCCCACTTAATGATG+TGG + chr7.3:39276665-39276684 MS.gene84597:CDS 45.0%
GATTCGCCATTCGAAACAAG+AGG - chr7.3:39279980-39279999 None:intergenic 45.0%
GTGTCTAGACTAGCAATCCA+TGG + chr7.3:39278159-39278178 MS.gene84597:intron 45.0%
GTTCGTGAGTTCAGACTGTA+TGG - chr7.3:39276466-39276485 None:intergenic 45.0%
GTTTATGGTGACAGACCAGT+TGG + chr7.3:39276593-39276612 MS.gene84597:CDS 45.0%
TAGAATGGGAGAATGAGGGA+TGG - chr7.3:39277795-39277814 None:intergenic 45.0%
TAGCCCCCTAAAGATGCAAA+AGG + chr7.3:39277356-39277375 MS.gene84597:CDS 45.0%
TAGTCTTCTCACCTTTCCCT+TGG + chr7.3:39276302-39276321 MS.gene84597:CDS 45.0%
TCATCACTCTGCAGTGTGAT+TGG + chr7.3:39279025-39279044 MS.gene84597:intron 45.0%
TCTATGGTCACAGACATGCA+AGG + chr7.3:39275579-39275598 MS.gene84597:CDS 45.0%
TGAAGCTATGGTTGGAGCTA+GGG + chr7.3:39279750-39279769 MS.gene84597:CDS 45.0%
TTAACAGAGACTGACGGCAA+CGG + chr7.3:39278375-39278394 MS.gene84597:intron 45.0%
TTACCCCTGCCATGTAGAAT+AGG + chr7.3:39278974-39278993 MS.gene84597:intron 45.0%
TTCTTTGATGCAGACTGGTG+TGG - chr7.3:39279247-39279266 None:intergenic 45.0%
TTGAATCCGTATAGTGGTGG+CGG - chr7.3:39279800-39279819 None:intergenic 45.0%
TTGGCCTGAAGGAGGTAAAA+GGG + chr7.3:39276706-39276725 MS.gene84597:intron 45.0%
! AGATTGAACGAAAGGTGCGA+AGG + chr7.3:39277221-39277240 MS.gene84597:intron 45.0%
! ATTGGCCTGAAGGAGGTAAA+AGG + chr7.3:39276705-39276724 MS.gene84597:intron 45.0%
! CGTTAATATTGGCCTGAAGG+AGG + chr7.3:39276698-39276717 MS.gene84597:CDS 45.0%
! GCTTCATATCTGGAACTTGG+TGG - chr7.3:39279736-39279755 None:intergenic 45.0%
! GGACCCATGTGACATTTTCT+AGG + chr7.3:39279298-39279317 MS.gene84597:intron 45.0%
! GGAGTGTTACATATGCTCGA+AGG + chr7.3:39276327-39276346 MS.gene84597:CDS 45.0%
!! ACTTGGTGGCGAAACTATGA+AGG - chr7.3:39279722-39279741 None:intergenic 45.0%
!! CATTGACTCCAAGCTTCTGA+AGG - chr7.3:39275903-39275922 None:intergenic 45.0%
!! CCTAAATCCCCTATTTCTGG+AGG + chr7.3:39276549-39276568 MS.gene84597:CDS 45.0%
AACGGCCTCAACCAGTTCAT+TGG + chr7.3:39276856-39276875 MS.gene84597:CDS 50.0%
ACAGCAGAAGTAGGACTGGA+AGG - chr7.3:39275680-39275699 None:intergenic 50.0%
AGAACGGTGTTCTGGTGTAG+AGG - chr7.3:39279564-39279583 None:intergenic 50.0%
AGAGCAAGCTTCTACAACGG+AGG - chr7.3:39279541-39279560 None:intergenic 50.0%
AGTCCCAAGTAACCGAATGG+AGG + chr7.3:39276161-39276180 MS.gene84597:CDS 50.0%
CAAGACCAAGGCCAGATTGT+TGG + chr7.3:39277922-39277941 MS.gene84597:CDS 50.0%
CCATTCGAAACAAGAGGAGG+TGG - chr7.3:39279974-39279993 None:intergenic 50.0%
CGTCCCACTTAATGATGTGG+AGG + chr7.3:39276668-39276687 MS.gene84597:CDS 50.0%
GAACTTCCGCCACCACTATA+CGG + chr7.3:39279791-39279810 MS.gene84597:CDS 50.0%
GCATTGGAGTCACAACCAAC+TGG - chr7.3:39276611-39276630 None:intergenic 50.0%
GGCAGGAAGTAGATCTGTTC+AGG + chr7.3:39277314-39277333 MS.gene84597:intron 50.0%
GTGTACCAACAATCTGGCCT+TGG - chr7.3:39277930-39277949 None:intergenic 50.0%
GTTAGAAATGGCATCCGTCG+CGG - chr7.3:39279590-39279609 None:intergenic 50.0%
TAACACTCCTCCCAAGGGAA+AGG - chr7.3:39276316-39276335 None:intergenic 50.0%
TCGCCATTCGAAACAAGAGG+AGG - chr7.3:39279977-39279996 None:intergenic 50.0%
TCTCACAGCAGAAGTAGGAC+TGG - chr7.3:39275684-39275703 None:intergenic 50.0%
TGAGCACCTGCTGAGTTTCT+TGG - chr7.3:39275619-39275638 None:intergenic 50.0%
TGGCGAAACTATGAAGGAGG+AGG - chr7.3:39279716-39279735 None:intergenic 50.0%
! CAGTCCCTTTTACCTCCTTC+AGG - chr7.3:39276713-39276732 None:intergenic 50.0%
! CCACCTCCTCTTGTTTCGAA+TGG + chr7.3:39279971-39279990 MS.gene84597:CDS 50.0%
! TGGTGGCGAAACTATGAAGG+AGG - chr7.3:39279719-39279738 None:intergenic 50.0%
! TGGTGGTGCTCGGTTAGAAA+TGG - chr7.3:39279602-39279621 None:intergenic 50.0%
ACAAGAGGAGGTGGAACTCG+CGG - chr7.3:39279965-39279984 None:intergenic 55.0%
AGGAAAGCCATGGGTGACCA+TGG + chr7.3:39277756-39277775 MS.gene84597:intron 55.0%
CTTCTCACCTTTCCCTTGGG+AGG + chr7.3:39276306-39276325 MS.gene84597:CDS 55.0%
GCAAGCTTCTACAACGGAGG+AGG - chr7.3:39279538-39279557 None:intergenic 55.0%
GCTTCTACAACGGAGGAGGA+TGG - chr7.3:39279534-39279553 None:intergenic 55.0%
GGAGCTAGGGCGAAGAACAT+TGG + chr7.3:39279763-39279782 MS.gene84597:CDS 55.0%
TGCAGACTGGTGTGGCGATA+AGG - chr7.3:39279239-39279258 None:intergenic 55.0%
AACACCGTTCTCCACCGCGA+CGG + chr7.3:39279573-39279592 MS.gene84597:intron 60.0%
AGAAATGGCATCCGTCGCGG+TGG - chr7.3:39279587-39279606 None:intergenic 60.0%
CGCGGTGGAGAACGGTGTTC+TGG - chr7.3:39279572-39279591 None:intergenic 65.0%
GCATCCGTCGCGGTGGAGAA+CGG - chr7.3:39279580-39279599 None:intergenic 65.0%


Chromosome Type Strat End Strand Name
chr7.3 gene 39275334 39280093 39275334 ID=MS.gene84597
chr7.3 mRNA 39275334 39280093 39275334 ID=MS.gene84597.t1;Parent=MS.gene84597
chr7.3 exon 39275334 39275975 39275334 ID=MS.gene84597.t1.exon1;Parent=MS.gene84597.t1
chr7.3 CDS 39275334 39275975 39275334 ID=cds.MS.gene84597.t1;Parent=MS.gene84597.t1
chr7.3 exon 39276075 39276719 39276075 ID=MS.gene84597.t1.exon2;Parent=MS.gene84597.t1
chr7.3 CDS 39276075 39276719 39276075 ID=cds.MS.gene84597.t1;Parent=MS.gene84597.t1
chr7.3 exon 39276808 39276877 39276808 ID=MS.gene84597.t1.exon3;Parent=MS.gene84597.t1
chr7.3 CDS 39276808 39276877 39276808 ID=cds.MS.gene84597.t1;Parent=MS.gene84597.t1
chr7.3 exon 39277319 39277377 39277319 ID=MS.gene84597.t1.exon4;Parent=MS.gene84597.t1
chr7.3 CDS 39277319 39277377 39277319 ID=cds.MS.gene84597.t1;Parent=MS.gene84597.t1
chr7.3 exon 39277847 39278050 39277847 ID=MS.gene84597.t1.exon5;Parent=MS.gene84597.t1
chr7.3 CDS 39277847 39278050 39277847 ID=cds.MS.gene84597.t1;Parent=MS.gene84597.t1
chr7.3 exon 39279728 39280093 39279728 ID=MS.gene84597.t1.exon6;Parent=MS.gene84597.t1
chr7.3 CDS 39279728 39280093 39279728 ID=cds.MS.gene84597.t1;Parent=MS.gene84597.t1
Gene Sequence

>MS.gene84597

ATGGCTGAAAATACCTCAGCAAAACAAGTAGACAAGGTTACCATTAGAGTTTTGGTGGACAAGAAGAAAAATAAAGTTCTATTTGCTGAGGCAGATAAGGATTTTGTTGATGTTCTTTTGAGCTTCTTAACATTGCGCTTAGGGACCATTGCAAAACTTGTGGCTAATGACTCAAATTTTGAAGCATTGAGCTTTGGCAGTATTAGTTCACTGTATCAAAGTGTGTCAGATCTTGATGAAAAATATCTATGGTCACAGACATGCAAGGAAATGCTTATCAATCCAAGAAACTCAGCAGGTGCTCATTGCCAGAATATGAAACTGAACATTGACAATACTAAAACCTTCCAGTCCTACTTCTGCTGTGAGAACAAGACTTGCAGAATTGGAAATAAATACTGTGTAAGTTTCTTCAGGAATCAGAAATGTATTTGTGGTAAGCTGTTGAACCGAGAAGAATTCCAGAATTTGAGTAATGAAATTGGTTTTGTTAAGGAAATGTCGGCGTTTATCATATCTGATGAACTTTATGCTATGCCAAATGTTGTTACGACAACTTTAAATCTCCTTCAGAAGCTTGGAGTCAATGACATTGGTGCTATTGATAAACAAACCGTTAATATCAACATCACCAAGAAAGAGGTATCTTTTCTTGTTCTGTGTTTATATGACATATTTTTTGTTGATTATTAGTATTATTGTTTTTTCTCTCACTAATTCTTCAATATGTTGTTTAAATAGGTAGTTGATCTTCTCAAATTGTCTTTGGTCTCAAAAACTCCTCTGTCAGACTTTATATTTAAAAAGCAGCAGTCTGTTGAAATTTTAGTCCCAAGTAACCGAATGGAGGTTAATATTGGTAAAGAAAAGGAAGAATCTAACGAAATGGTTGTGAAAGTAGTGAGAAGAAAATCAAATAAGCAGATCTTGTTTATTGAAGCAGAGGAAGATTTTGCTGATTTTGTTTTTAGTCTTCTCACCTTTCCCTTGGGAGGAGTGTTACATATGCTCGAAGGATTCTCTTCCTTAAGCTGCATTGATAATTTATATAAGAGTGTGACTAAATTGAGCTCAGAAAAGTGCTTAAGGTCACAGTATTTCAAAAACCTACTAACTATTCCAAGCATTTCCATACAGTCTGAACTCACGAACCAGATATTACCGATACCTTGTAACGATTATAAGGTAAGAAATATGTCAGTTAAATTTGTTGATCCTAAATCCCCTATTTCTGGAGGATATGCTAGAGCACCATTAACGTTTATGGTGACAGACCAGTTGGTTGTGACTCCAATGCCATCCATTGATGGTATTTCATATCTTGAAAGAATGAACGTCCCACTTAATGATGTGGAGGAAATTGTCGTTAATATTGGCCTGAAGGAGGTAAAAGGGACTGTGTTAGTCTTTCGTTTTAATATTTCTTGAATTAGATTCATAACAACTCACCATATTTGATTTCTTGTGGTTGCAGGGTCTCAGCATACTCAGAGCTTCATTGACCTCAAAATTTGCTTTGACAAACGGCCTCAACCAGTTCATTGGTTAGTATAGTATTAGACCAAACAAAACCTCATCCTACATAATAATTATAACAAAAACGATATTGAAGTTCATCGAGAAATATCATCAAAAATAGTCACGTCGAACATGTCGCATGAACTTTTTTTAATTGAGCATATTTACTAGTAACCACCTCTTATGTGTTCGGTAGTAACCGACTTGTTATGTGTAGTACTAATTTTCCATGGAAATGCAATGAATGGTACCCATATATGGGGATGTTCATATGATCTTAGGGTAATGAGGAGTAATAATGACAGTTAATGTTGAGAAAATTGAGTAATTAAAAATGAACATAGAAAAAGAAGAGAAGTAAAGGAAGAAAGATTGAACGAAAGGTGCGAAGGAAAGAGAGTAAGAGTCATAAATAATTTTGAATAAGTACTAACTACTCCTTTATTATATGTGCATGTTCATGGCAGGAAGTAGATCTGTTCAGGCTAATTTGTCATCTAATGCTAGCCCCCTAAAGATGCAAAAGGTAGAAAAATAAAGCTTGTTATAACCATGTTTCTATTTTTGTGTTTGAAATATGTGGTTTTGTTTAAGTTATTTGAATGATCACAGTTTATTTTGTATTCTGTTATGATTTACTTCTTGAGAAAGACTAAGGGGAGTTTGTTCCTCTATTGTCATGTCTTATTAGTGTTTCGTGTTGTTTTCCTTTTTACCAAATTCATGTATTTTGATCACATAGATTTTGCCACCTCAGTTATATAATTATCGTTATTTATGTGACAAGGCTAAAGATATTATCGATCAATAGAAATGCACTTGACAATAGTCGATGCAATTTAAATTACTTTACTTTTGTAAAATGTCGTTCTACCAGATATTGAATCAGTTGTTACTGAATGAGAGGAAAGCCATGGGTGACCATGGATCTATTAAACTTCCATCCCTCATTCTCCCATTCTAACTAATAACTTGTTTATTACATCTGTGTTCAGCCTAATGATGATACTGCTGGATGTGGCTTCTTTAGTTGTCCTTCAGACAACAAAAAATCAACAAAAGTTGAAGGTCAAGACCAAGGCCAGATTGTTGGTACACAATGTGTTGAATGTTGCAAGAAGGATACAGAAATAACGTCACTTACAAGGAAGTTAACCAAGATTAAGAGCAATGAAAAATCAACCAAATCTATGTTGATGGTGGTTATTGTTATTTGTTTGTTCATCACCACAATATGCTTGATTGCCAACAATTTAAAGTGATGATATACATATGATGGAATGTGTTATGTGTTTAGTTAATGTAATGTGTCTAGACTAGCAATCCATGGATGGAATGTGTTGTGTGACTGATATATGTGGTGTTCTTTTTGTAATCTGAGTTAATCAAGTTAATGAAATTTGATTAGAATATCATTCTGAGATGTATTCTTCCTAGTTTGCATCTTTTGCCTTTTTGAGATTGAAGCAGTTGATTGTCCCTTGAATAGAGCAGATGTGTTGTTTGGTTTGCTTGGCATCTGTTTAACAGAGACTGACGGCAACGGTAACTTTGAAATGATTTACAAACTAAAAGGACCAATTTGAAACTTTTGAAAATTAAAGGACTAACTTGGGAATTCTGTGAAACTAAAAGGACCAAAAGTGGTATTCGACCTTTATTTTTTGTGAGCGCAAGATGTGTTTCTTGCACTCTAAGGAACTAAAATGAAAGGAATTGAGAAATTGAGAGGGAGAGAGTATAAGTGAATTGCAATTCTATTGGTAATGAATTGAGAGTGATTTTGAATCACAGGTAAACTAACTAATACTAACAAGCTTGTTTGTTACTAACCACCAACTTCTCTAACTAATTATTTGTAACTAAGTTTGTTCAAAAAAAAACTATTTGTAACAAAAATGTTTTGTTGTTGAATTATTCCATTGTATGCTCCTTTAATTCAACTACTATTCATCAATCAATTGACTGATGTCAAGTTTCTTCCCAAGGTCTAAAAACATGTCTATCTTCAAGTCCTTAGTTAGTATGTCTGCAATCTATGATTCAGTTAGAAAATGTTTCACTTCTAGCCTAACATTGTTTACTTGCTCCCTTAAGAAGTGAAAACCGAGCTTCAATGTATTTACCCCTGCCATGTAGAATAGGACTTTTGCCTAGATTTATAGCAGACTTATCATCACTCTGCAGTGTGATTGGATTCTTCATTTGAATCTTCAACTCCTTTAGCACTGATTCGATCCAAATAGCTTGAAAAGCCGCATATGAACCAGATATGTATTCTTCTTCACATGAGGATAATGCTATTACCAGTTACTTCCTTGAGCACTAAGAAATTAGAGCTTCAAACAATTTAAACAGATAACCTGTGGTGCTTCTTTTATAAACCTTATCGCCACACCAGTCTGCATCAAAGAAGCATGTGATGAATTCATCTTCTTGTTCTGAGGGACCCATGTGACATTTTCTAGGAACATCCATGAATCTACAAAACTTCTCTCGGGATTGCTATTGCATATATACATGAATCAGTTTTCTTTTCATCAGTGTTCTTCTCAAGCTTAAAGTTTGATTCAATTAGTGTAGCCACATGACTACAATCAACCATATCGAACTTTCCATGACTTCTTTTGCATATTTCTTATAATGAAGAATTATAAGTCTATCATGTGTCTACATGCACCATCCTCCTCCGTTGTAGAAGCTTGCTCTCCTCTACACCAGAACACCGTTCTCCACCGCGACGGATGCCATTTCTAACCGAGCACCACCACTACATTATTCCCAAAAATTCAGACTATAACTCCGGCGTAACCATTTTTGTTACGCATTCCTCCGCCATAATTGTTTTCTGTTACGATGTTCCTCCTCCTTCATAGTTTCGCCACCAAGTTCCAGATATGAAGCTATGGTTGGAGCTAGGGCGAAGAACATTGGAAGTCGAACTTCCGCCACCACTATACGGATTCAATCTGCGATCAAAACACTTCAAGATTGCTCACATAAAATTCTCACGTCGACAGATCCAAACTCAAACAAAGTACTGTTGTTTCTCCAACTATCACAAACAATGTGATTCATTGCGCGAATCAGATCTCGACAATGACATTCAGCCGCGAGTTCCACCTCCTCTTGTTTCGAATGGCGAATCAAGATCGCCGAATCAAAATCTCACAACTGTTGTCGCTCCCAACACCAACAAAGTTTTGGCGAATCTCATGACAAGGGCTCTGACACAAACATAA

Protein sequence

>MS.gene84597.t1

MAENTSAKQVDKVTIRVLVDKKKNKVLFAEADKDFVDVLLSFLTLRLGTIAKLVANDSNFEALSFGSISSLYQSVSDLDEKYLWSQTCKEMLINPRNSAGAHCQNMKLNIDNTKTFQSYFCCENKTCRIGNKYCVSFFRNQKCICGKLLNREEFQNLSNEIGFVKEMSAFIISDELYAMPNVVTTTLNLLQKLGVNDIGAIDKQTVNINITKKEVVDLLKLSLVSKTPLSDFIFKKQQSVEILVPSNRMEVNIGKEKEESNEMVVKVVRRKSNKQILFIEAEEDFADFVFSLLTFPLGGVLHMLEGFSSLSCIDNLYKSVTKLSSEKCLRSQYFKNLLTIPSISIQSELTNQILPIPCNDYKVRNMSVKFVDPKSPISGGYARAPLTFMVTDQLVVTPMPSIDGISYLERMNVPLNDVEEIVVNIGLKEGLSILRASLTSKFALTNGLNQFIGSRSVQANLSSNASPLKMQKPNDDTAGCGFFSCPSDNKKSTKVEGQDQGQIVGTQCVECCKKDTEITSLTRKLTKIKSNEKSTKSMLMFRHQVPDMKLWLELGRRTLEVELPPPLYGFNLRSKHFKIAHIKFSRRQIQTQTKYCCFSNYHKQCDSLRESDLDNDIQPRVPPPLVSNGESRSPNQNLTTVVAPNTNKVLANLMTRALTQT