AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene89794

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene89794.t1 MTR_4g017470 63.360 494 128 10 1 447 1 488 0.0 569
MS.gene89794.t1 MTR_4g017550 82.258 310 52 2 117 426 164 470 5.68e-174 496
MS.gene89794.t1 MTR_4g017550 76.238 101 22 1 23 121 3 103 3.75e-44 161
MS.gene89794.t1 MTR_4g017440 56.751 511 133 12 3 435 8 508 1.23e-172 494
MS.gene89794.t1 MTR_4g017410 64.000 350 95 5 112 461 188 506 3.83e-134 396
MS.gene89794.t1 MTR_4g017410 81.667 120 19 2 1 117 1 120 4.07e-58 199
MS.gene89794.t1 MTR_4g017830 62.048 332 106 7 119 439 189 511 2.29e-124 372
MS.gene89794.t1 MTR_4g017830 65.812 117 39 1 3 119 6 121 2.82e-45 165
MS.gene89794.t1 MTR_4g019340 62.541 307 81 5 119 419 225 503 1.09e-115 349
MS.gene89794.t1 MTR_4g019340 65.217 115 34 2 8 117 37 150 4.87e-37 142
MS.gene89794.t1 MTR_4g017610 59.416 308 100 7 119 425 192 475 2.09e-107 327
MS.gene89794.t1 MTR_4g017610 77.876 113 24 1 4 115 8 120 9.61e-53 184
MS.gene89794.t1 MTR_7g066350 32.406 503 204 12 1 425 1 445 7.12e-61 206
MS.gene89794.t1 MTR_4g019310 41.390 331 161 9 118 437 191 499 4.74e-59 202
MS.gene89794.t1 MTR_4g019310 50.000 122 57 3 1 120 1 120 9.72e-29 119
MS.gene89794.t1 MTR_4g019310 30.000 250 129 9 200 422 8 238 5.94e-15 77.4
MS.gene89794.t1 MTR_7g012680 31.417 487 237 12 3 435 8 451 7.86e-55 189
MS.gene89794.t1 MTR_7g066340 30.224 536 227 17 2 455 5 475 1.24e-50 179
MS.gene89794.t1 MTR_7g066570 31.648 534 235 21 3 446 8 501 5.48e-50 179
MS.gene89794.t1 MTR_2g029400 32.517 449 220 15 1 417 6 403 1.51e-49 174
MS.gene89794.t1 MTR_1g041315 28.889 495 213 15 5 413 10 451 2.10e-49 176
MS.gene89794.t1 MTR_7g066580 31.158 475 233 15 15 429 1 441 5.66e-49 174
MS.gene89794.t1 MTR_7g066310 31.330 466 236 13 8 455 6 405 8.00e-48 169
MS.gene89794.t1 MTR_7g066400 29.243 489 221 13 2 425 5 433 6.99e-47 168
MS.gene89794.t1 MTR_7g063920 29.387 473 253 10 3 435 5 436 1.45e-46 167
MS.gene89794.t1 MTR_7g063900 31.496 508 245 15 1 430 1 483 1.16e-45 166
MS.gene89794.t1 MTR_4g019240 52.147 163 54 3 4 165 8 147 1.01e-44 154
MS.gene89794.t1 MTR_4g019240 67.308 52 17 0 388 439 113 164 1.11e-13 69.7
MS.gene89794.t1 MTR_7g058710 27.701 509 268 14 1 435 1 483 3.43e-40 150
MS.gene89794.t1 MTR_7g066430 27.490 502 265 14 10 431 5 487 2.92e-33 131
MS.gene89794.t1 MTR_1g014060 29.587 436 235 14 18 435 9 390 3.99e-33 129
MS.gene89794.t1 MTR_7g063670 27.846 492 247 13 6 435 12 457 4.84e-33 130
MS.gene89794.t1 MTR_7g066260 33.427 356 168 12 118 455 187 491 7.13e-32 127
MS.gene89794.t1 MTR_7g066260 48.696 115 52 3 3 117 9 116 2.87e-25 108
MS.gene89794.t1 MTR_7g066490 31.023 303 151 7 10 262 17 311 1.58e-30 122
MS.gene89794.t1 MTR_7g066410 31.118 331 176 7 134 430 201 513 1.30e-29 121
MS.gene89794.t1 MTR_7g066410 43.243 111 56 2 10 120 11 114 7.75e-22 98.6
MS.gene89794.t1 MTR_7g063660 30.746 335 195 8 112 435 169 477 2.90e-28 117
MS.gene89794.t1 MTR_7g063660 42.373 118 59 3 1 117 1 110 1.34e-19 91.7
MS.gene89794.t1 MTR_7g063660 30.000 200 95 7 197 379 6 177 2.92e-13 72.0
MS.gene89794.t1 MTR_7g062280 30.746 335 192 8 112 435 186 491 5.35e-28 116
MS.gene89794.t1 MTR_7g062280 40.870 115 61 2 3 117 4 111 3.50e-16 81.3
MS.gene89794.t1 MTR_7g066360 33.618 351 167 14 118 456 183 479 3.51e-26 111
MS.gene89794.t1 MTR_7g066360 45.802 131 58 5 3 133 8 125 2.61e-22 99.8
MS.gene89794.t1 MTR_7g063890 31.928 332 193 7 118 436 194 505 3.06e-25 108
MS.gene89794.t1 MTR_7g063890 41.379 116 59 3 1 115 19 126 2.05e-18 88.2
MS.gene89794.t1 MTR_7g063890 29.457 258 134 10 195 434 22 249 8.92e-14 73.6
MS.gene89794.t1 MTR_7g066680 31.655 278 146 10 149 409 37 287 1.91e-24 104
MS.gene89794.t1 MTR_7g062300 29.664 327 190 8 112 428 176 472 3.15e-24 105
MS.gene89794.t1 MTR_7g062300 42.609 115 59 2 3 117 6 113 1.57e-17 85.1
MS.gene89794.t1 MTR_7g062300 32.632 190 91 8 201 375 13 180 6.58e-13 70.9
MS.gene89794.t1 MTR_7g066280 30.325 277 162 9 198 455 148 412 1.53e-23 102
MS.gene89794.t1 MTR_7g063840 26.888 331 204 5 114 435 172 473 2.54e-23 102
MS.gene89794.t1 MTR_7g063840 44.828 116 55 3 3 117 4 111 1.37e-18 88.6
MS.gene89794.t1 MTR_7g066290 48.696 115 52 3 3 117 9 116 5.35e-23 101
MS.gene89794.t1 MTR_7g066290 34.444 180 101 5 118 285 187 361 4.63e-15 77.4
MS.gene89794.t1 MTR_7g063880 29.341 334 179 12 112 430 172 463 3.30e-22 99.4
MS.gene89794.t1 MTR_7g063880 43.200 125 59 4 3 123 5 121 2.14e-19 90.9
MS.gene89794.t1 MTR_7g063880 31.053 190 93 7 200 375 11 176 2.32e-12 69.3
MS.gene89794.t1 MTR_7g100420 28.111 434 216 14 9 425 39 393 1.55e-21 96.7
MS.gene89794.t1 MTR_7g063830 43.697 119 57 4 1 117 1 111 1.22e-20 94.4
MS.gene89794.t1 MTR_7g063830 26.331 338 169 10 112 435 173 444 1.23e-16 82.4
MS.gene89794.t1 MTR_7g063830 30.481 187 94 7 203 375 13 177 9.18e-12 67.4
MS.gene89794.t1 MTR_3g065200 26.407 462 242 19 10 423 4 415 2.25e-20 93.6
MS.gene89794.t1 MTR_7g063820 46.875 128 54 5 1 123 1 119 4.07e-20 93.2
MS.gene89794.t1 MTR_7g063820 28.070 342 196 8 112 435 175 484 8.59e-20 92.0
MS.gene89794.t1 MTR_8g445860 29.958 237 146 6 195 423 8 232 9.69e-20 88.6
MS.gene89794.t1 MTR_8g445860 38.000 100 48 3 1 100 7 92 2.12e-11 64.3
MS.gene89794.t1 MTR_7g066480 45.045 111 54 2 10 120 17 120 3.02e-19 90.1
MS.gene89794.t1 MTR_7g066480 33.766 154 99 2 112 263 174 326 1.13e-14 76.3
MS.gene89794.t1 MTR_3g007740 28.571 301 180 9 131 430 177 443 1.03e-17 85.5
MS.gene89794.t1 MTR_3g007740 40.678 118 49 3 1 117 1 98 3.62e-14 74.7
MS.gene89794.t1 MTR_3g007740 32.487 197 100 7 200 390 9 178 3.62e-14 74.7
MS.gene89794.t1 MTR_7g062270 42.017 119 59 4 1 117 1 111 2.21e-17 84.0
MS.gene89794.t1 MTR_1g115440 26.230 244 147 5 196 423 7 233 1.30e-16 79.7
MS.gene89794.t1 MTR_1g115440 36.842 114 58 3 1 112 1 102 7.06e-12 65.9
MS.gene89794.t1 MTR_0150s0010 28.870 239 147 6 196 423 6 232 2.94e-16 78.6
MS.gene89794.t1 MTR_0150s0010 38.835 103 50 3 1 102 1 91 6.64e-12 65.9
MS.gene89794.t1 MTR_8g023240 24.251 334 191 9 9 282 37 368 1.58e-14 76.3
MS.gene89794.t1 MTR_1g115450 42.857 84 40 1 195 270 2 85 1.67e-14 70.9
MS.gene89794.t1 MTR_1g115450 38.000 100 48 3 1 100 1 86 5.91e-12 63.5
MS.gene89794.t1 MTR_7g058700 43.678 87 40 1 200 277 752 838 3.45e-14 75.5
MS.gene89794.t1 MTR_7g058700 33.333 153 63 5 21 170 531 647 2.69e-13 72.8
MS.gene89794.t1 MTR_1g115455 29.268 246 133 10 196 423 5 227 5.50e-14 71.6
MS.gene89794.t1 MTR_1g115455 39.000 100 49 2 1 100 1 88 7.74e-14 71.2
MS.gene89794.t1 MTR_6g006800 73.913 46 10 1 1 44 1 46 7.93e-14 66.6
MS.gene89794.t1 MTR_0150s0030 38.202 89 45 2 196 275 4 91 1.30e-12 67.0
MS.gene89794.t1 MTR_0150s0030 34.000 100 55 1 3 102 2 90 3.40e-12 65.9
MS.gene89794.t1 MTR_8g445910 39.326 89 44 2 196 275 4 91 5.43e-12 66.6
MS.gene89794.t1 MTR_8g445910 37.000 100 52 2 3 102 2 90 1.04e-11 65.5
MS.gene89794.t1 MTR_8g445920 40.299 67 40 0 196 262 6 72 5.71e-12 62.8
MS.gene89794.t1 MTR_8g044890 40.299 67 40 0 196 262 6 72 5.71e-12 62.8
MS.gene89794.t1 MTR_8g044880 43.284 67 38 0 196 262 4 70 8.94e-12 65.9
MS.gene89794.t1 MTR_8g044880 37.000 100 52 2 3 102 2 90 9.27e-12 65.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene89794.t1 AT3G09110 31.611 329 148 10 1 262 1 319 9.68e-35 132
MS.gene89794.t1 AT5G01140 27.470 506 246 17 1 435 1 456 4.78e-30 122
MS.gene89794.t1 AT5G01120 27.841 352 203 12 118 446 185 508 2.61e-26 112
MS.gene89794.t1 AT5G01120 37.879 132 74 4 1 131 1 125 1.15e-16 82.8
MS.gene89794.t1 AT5G01130 29.412 323 171 10 114 429 172 444 1.53e-24 106
MS.gene89794.t1 AT5G01130 40.678 118 61 3 1 117 1 110 8.17e-20 92.0
MS.gene89794.t1 AT5G01150 29.191 346 193 9 110 437 176 487 3.85e-23 102
MS.gene89794.t1 AT5G01150 42.500 120 62 3 1 120 1 113 1.79e-20 94.4
MS.gene89794.t1 AT3G09140 27.419 310 191 8 131 430 209 494 4.59e-22 99.4
MS.gene89794.t1 AT3G09140 36.567 134 74 4 1 134 1 123 7.26e-17 83.2
MS.gene89794.t1 AT3G09140 28.346 254 140 8 196 422 5 243 1.08e-13 73.6
MS.gene89794.t1 AT5G43240 29.810 369 196 16 112 456 39 368 1.18e-20 93.6
MS.gene89794.t1 AT5G43240 29.539 369 197 15 112 456 183 512 2.35e-20 94.0
MS.gene89794.t1 AT5G43240 41.176 119 63 3 1 119 1 112 2.81e-17 84.7
MS.gene89794.t1 AT5G43240 29.539 369 197 15 112 456 183 512 2.35e-20 94.0
MS.gene89794.t1 AT5G43240 41.176 119 63 3 1 119 1 112 2.81e-17 84.7
MS.gene89794.t1 AT5G43240 29.539 369 197 15 112 456 183 512 2.35e-20 94.0
MS.gene89794.t1 AT5G43240 41.176 119 63 3 1 119 1 112 2.81e-17 84.7
MS.gene89794.t1 AT3G09120 42.982 114 57 3 6 119 3 108 2.01e-18 86.3
MS.gene89794.t1 AT3G09120 28.629 248 137 8 196 423 2 229 1.19e-16 81.3
MS.gene89794.t1 AT3G09120 30.719 153 96 3 107 254 166 313 4.26e-13 70.5
MS.gene89794.t1 AT3G09140 26.621 293 181 8 148 430 254 522 4.75e-17 84.0
MS.gene89794.t1 AT3G09140 36.567 134 74 4 1 134 1 123 8.20e-17 83.2
MS.gene89794.t1 AT3G09140 26.400 250 142 8 196 418 5 239 8.55e-11 64.3
MS.gene89794.t1 AT5G37320 38.235 102 55 3 16 117 18 111 1.48e-13 73.2

Find 102 sgRNAs with CRISPR-Local

Find 187 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GCCTTTGACAAATACAATTT+TGG 0.171177 4.4:-83391649 MS.gene89794:CDS
GGGTGGGTTGTCTTTGTTAT+TGG 0.188100 4.4:+83391611 None:intergenic
CGATCAAAATATTGTTTCTT+TGG 0.212310 4.4:+83391213 None:intergenic
AAAGAAGTTGATTCTGGTTT+AGG 0.264864 4.4:+83390732 None:intergenic
CAGCAGTAAAATGGATATTA+AGG 0.266548 4.4:-83391544 MS.gene89794:CDS
AACGGATCAGAACATGTTAT+TGG 0.269217 4.4:-83391087 MS.gene89794:CDS
GTTGTCTTTGTTATTGGATT+TGG 0.286232 4.4:+83391617 None:intergenic
CCCCAGTAACAGCAGTAAAA+TGG 0.289568 4.4:-83391553 MS.gene89794:CDS
GAAAGAGTTGATTCTGGTTT+AGG 0.294834 4.4:+83390762 None:intergenic
ACTACATATTACTATGGTAT+AGG 0.297573 4.4:-83391258 MS.gene89794:CDS
ACTTTCAAAGAAGTTGATTC+TGG 0.313498 4.4:+83390726 None:intergenic
CACTAACTGCTGACACGAAT+TGG 0.314614 4.4:+83391586 None:intergenic
TGCAGTCGATACAAATGTTT+TGG 0.314662 4.4:+83391123 None:intergenic
GTGAAGAGAGCAACATTATA+TGG 0.320276 4.4:-83391060 MS.gene89794:CDS
ACCTTAACTCAGACGATGTT+TGG 0.325303 4.4:-83393118 MS.gene89794:CDS
GTGTGTGATGGTAGTGCTTC+AGG 0.372250 4.4:+83391279 None:intergenic
CTACATATTACTATGGTATA+GGG 0.380267 4.4:-83391257 MS.gene89794:CDS
TCTGATCCGTTGACAGATCT+AGG 0.382825 4.4:+83391099 None:intergenic
GACAATGGGATTAAAGATAG+AGG 0.393004 4.4:-83391184 MS.gene89794:CDS
TTTACTGCTGTTACTGGGGC+AGG 0.394135 4.4:+83391557 None:intergenic
TCCAAACATCGTCTGAGTTA+AGG 0.401587 4.4:+83393117 None:intergenic
AGCTTCCTTACCATGCCATT+AGG 0.401925 4.4:-83391450 MS.gene89794:CDS
ATGCAGATGTTGATTGAATC+CGG 0.403317 4.4:-83392791 MS.gene89794:CDS
TCACACACTACATATTACTA+TGG 0.403604 4.4:-83391264 MS.gene89794:CDS
GGATTGAGTAACACAGAAAC+CGG 0.407217 4.4:+83391348 None:intergenic
GTTTGTCCACTAATACTTTG+AGG 0.420214 4.4:+83393324 None:intergenic
TCCTCTAGTTGAGTCAAGTC+TGG 0.422333 4.4:+83392764 None:intergenic
AATTCTTCACAGGGATTCCT+AGG 0.422599 4.4:+83393062 None:intergenic
GGAATGTTGAGTGGCTGGTT+TGG 0.423650 4.4:+83391300 None:intergenic
CAAAGGCTCATGAGAGGTTA+AGG 0.430177 4.4:+83391665 None:intergenic
CTTCAGGAATGTTGAGTGGC+TGG 0.432766 4.4:+83391295 None:intergenic
GTGTAGGCTTTGCGCTTCCT+TGG 0.434164 4.4:-83390843 MS.gene89794:intron
AGCAAAGAATTAGAAGAAAG+TGG 0.435467 4.4:+83391012 None:intergenic
AACAAATGCTGCTGCATCCT+AGG 0.435906 4.4:-83393079 MS.gene89794:CDS
TTGTTTCTCATTGCTGTTGG+TGG 0.438700 4.4:+83393202 None:intergenic
CCTGGTATAGCACCACAGTT+TGG 0.441678 4.4:-83391327 MS.gene89794:CDS
GATTCCCCTCAAAGTATTAG+TGG 0.443614 4.4:-83393330 MS.gene89794:CDS
TTTGATCGTAATGTGACAAT+GGG 0.446693 4.4:-83391198 MS.gene89794:CDS
GCCAAAATTGTATTTGTCAA+AGG 0.454824 4.4:+83391648 None:intergenic
ACATTCGAAAGAGTTGATTC+TGG 0.459003 4.4:+83390756 None:intergenic
ACACATCCAGCAAAAGAGTT+AGG 0.466364 4.4:+83391405 None:intergenic
TGACTCTTGTTGAGAGGCCA+TGG 0.466458 4.4:+83393358 None:intergenic
CTGGTTTAGGCACACTCAAA+AGG 0.467866 4.4:+83390775 None:intergenic
GTTTCTGTGTTACTCAATCC+TGG 0.470852 4.4:-83391345 MS.gene89794:CDS
GGATCCATTGTAAAGCTTGT+GGG 0.479392 4.4:-83391429 MS.gene89794:CDS
TCTGAGTCATCACCGTTCCT+TGG 0.483446 4.4:-83393173 MS.gene89794:CDS
TGGTGCCAAGTGGAAGAGAT+AGG 0.487529 4.4:+83393240 None:intergenic
TTTGTCCACTAATACTTTGA+GGG 0.488139 4.4:+83393325 None:intergenic
AGCTTTACAATGGATCCTAA+TGG 0.492466 4.4:+83391435 None:intergenic
CTTCATGCACAATTCTTCAC+AGG 0.496875 4.4:+83393052 None:intergenic
AGAGCAACATTATATGGTAT+AGG 0.499621 4.4:-83391054 MS.gene89794:CDS
CCAAACTGTGGTGCTATACC+AGG 0.500141 4.4:+83391327 None:intergenic
AGGAGTGATTTCTAAGTCAC+GGG 0.505545 4.4:-83391160 MS.gene89794:CDS
TTGTTGTTTCTCATTGCTGT+TGG 0.506477 4.4:+83393199 None:intergenic
AACTGCTGACACGAATTGGT+TGG 0.509159 4.4:+83391590 None:intergenic
CGTTTCTGACTCTTGTTGAG+AGG 0.519387 4.4:+83393352 None:intergenic
AGGATCCATTGTAAAGCTTG+TGG 0.523652 4.4:-83391430 MS.gene89794:CDS
TTACTGCTGTTACTGGGGCA+GGG 0.530704 4.4:+83391558 None:intergenic
CAAGATTTACCTTGACTAGT+GGG 0.536805 4.4:-83390806 MS.gene89794:CDS
AGAGGTGTTTGATGTTTCCA+AGG 0.539221 4.4:+83393156 None:intergenic
ACTGCTGACACGAATTGGTT+GGG 0.548521 4.4:+83391591 None:intergenic
CTTCAAGATCATCAAGAGGA+AGG 0.549012 4.4:+83390968 None:intergenic
AGTTTCCTATCTCTTCCACT+TGG 0.549083 4.4:-83393245 MS.gene89794:CDS
TCAAGATTTACCTTGACTAG+TGG 0.553137 4.4:-83390807 MS.gene89794:CDS
ACAATGGGATTAAAGATAGA+GGG 0.553301 4.4:-83391183 MS.gene89794:CDS
CTGATCCGTTGACAGATCTA+GGG 0.562532 4.4:+83391100 None:intergenic
ACACAACATTGGCAAGAAAG+AGG 0.565404 4.4:-83392735 MS.gene89794:intron
TGTTTGATGTTTCCAAGGAA+CGG 0.566498 4.4:+83393161 None:intergenic
GTCTTTAAGCCCACTAGTCA+AGG 0.567139 4.4:+83390797 None:intergenic
TGCAGATGTTGATTGAATCC+GGG 0.567832 4.4:-83392790 MS.gene89794:CDS
TGGTAATTTGTACAAAAGTG+TGG 0.569416 4.4:-83391382 MS.gene89794:CDS
ATGGGATTAAAGATAGAGGG+AGG 0.573935 4.4:-83391180 MS.gene89794:CDS
GCTGATAAGCATTGGTGAAG+CGG 0.574463 4.4:-83390941 MS.gene89794:CDS
TTGAGTCAAGTCTGGATACC+CGG 0.574651 4.4:+83392772 None:intergenic
TGGATCCTAATGGCATGGTA+AGG 0.579373 4.4:+83391445 None:intergenic
TACAATGGATCCTAATGGCA+TGG 0.582946 4.4:+83391440 None:intergenic
TTGTCCACTAATACTTTGAG+GGG 0.589395 4.4:+83393326 None:intergenic
GAGGAGTGATTTCTAAGTCA+CGG 0.590457 4.4:-83391161 MS.gene89794:CDS
TTCATGCACAATTCTTCACA+GGG 0.599633 4.4:+83393053 None:intergenic
AAGTGTGGAGAACTTGAACC+CGG 0.604718 4.4:-83391367 MS.gene89794:CDS
CTGACACGAATTGGTTGGGT+GGG 0.607816 4.4:+83391595 None:intergenic
AGGTCCCACAAGCTTTACAA+TGG 0.609111 4.4:+83391425 None:intergenic
AGGTTAAGGCATACTTGAGG+AGG 0.618815 4.4:+83391679 None:intergenic
GAGGAAGTCACACACAACAT+TGG 0.621785 4.4:-83392746 MS.gene89794:CDS
TTCACTTCAAGATCATCAAG+AGG 0.622399 4.4:+83390964 None:intergenic
GGATTCAATCAACATCTGCA+TGG 0.626744 4.4:+83392793 None:intergenic
TCCAGACTTGACTCAACTAG+AGG 0.641739 4.4:-83392765 MS.gene89794:CDS
ATTTGTCAAAGGCTCATGAG+AGG 0.647356 4.4:+83391659 None:intergenic
GATAAGCATTGGTGAAGCGG+AGG 0.652499 4.4:-83390938 MS.gene89794:intron
GCTGACACGAATTGGTTGGG+TGG 0.658717 4.4:+83391594 None:intergenic
GAAGTGAAGCTGATAAGCAT+TGG 0.664925 4.4:-83390949 MS.gene89794:CDS
TAGTAATATGTAGTGTGTGA+TGG 0.665437 4.4:+83391267 None:intergenic
TTGATGTCAAGAATGCTCCA+AGG 0.669048 4.4:+83390826 None:intergenic
AGTGCTTCAGGAATGTTGAG+TGG 0.676094 4.4:+83391291 None:intergenic
AGACGAACGATGGTGCCAAG+TGG 0.681507 4.4:+83393230 None:intergenic
GAGAGGTTAAGGCATACTTG+AGG 0.684746 4.4:+83391676 None:intergenic
CTGCACCCTAGATCTGTCAA+CGG 0.690152 4.4:-83391105 MS.gene89794:CDS
TTCAATCAACATCTGCATGG+AGG 0.700385 4.4:+83392796 None:intergenic
GATTGAGTAACACAGAAACC+GGG 0.708506 4.4:+83391349 None:intergenic
TGGTTTGGACAACCAAACTG+TGG 0.745392 4.4:+83391315 None:intergenic
GGAGTGATTTCTAAGTCACG+GGG 0.768129 4.4:-83391159 MS.gene89794:CDS
GGTGGCTAAAAGACGAACGA+TGG 0.774962 4.4:+83393220 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTGATAATAAAAAGAAAAAA+CGG + chr4.4:83391381-83391400 None:intergenic 10.0%
!! AAAATTAAAAACTTCTGTAA+AGG - chr4.4:83392188-83392207 MS.gene89794:intron 15.0%
!! ACATAAAAGCAAAAATAAAA+AGG + chr4.4:83392113-83392132 None:intergenic 15.0%
!! TGATAATAAAAAGAAAAAAC+GGG + chr4.4:83391380-83391399 None:intergenic 15.0%
!!! GTTTTTTCTTTTTATTATCA+AGG - chr4.4:83391380-83391399 MS.gene89794:CDS 15.0%
!! ACAAAATGTTAAAACACAAA+AGG + chr4.4:83392337-83392356 None:intergenic 20.0%
!! TCGTAAAAAATCTATGTAAT+GGG + chr4.4:83391955-83391974 None:intergenic 20.0%
!! TTGAATGAAAGAATGAAAAT+AGG + chr4.4:83392236-83392255 None:intergenic 20.0%
!!! AAATATGAGACATTTAAGTT+AGG + chr4.4:83391424-83391443 None:intergenic 20.0%
!!! AATCTAAACAATCTTTTTGT+AGG - chr4.4:83391563-83391582 MS.gene89794:CDS 20.0%
!!! AGATTAAGAAACATGATTTT+CGG - chr4.4:83391498-83391517 MS.gene89794:CDS 20.0%
!!! TAGATAATATTTTTCCATGT+AGG + chr4.4:83391659-83391678 None:intergenic 20.0%
!!! TATTGATTTATTTACCTACA+TGG - chr4.4:83391642-83391661 MS.gene89794:CDS 20.0%
!!! TTTCAATTTTTTTTCTTCCT+AGG - chr4.4:83392296-83392315 MS.gene89794:intron 20.0%
! ACAATTAAAGTGAATCAAAG+AGG + chr4.4:83393184-83393203 None:intergenic 25.0%
! ACTACATATTACTATGGTAT+AGG - chr4.4:83392790-83392809 MS.gene89794:CDS 25.0%
! ATTCACTTTAATTGTTGTGT+AGG - chr4.4:83393189-83393208 MS.gene89794:CDS 25.0%
! CGTAAAAAATCTATGTAATG+GGG + chr4.4:83391954-83391973 None:intergenic 25.0%
! CTACATATTACTATGGTATA+GGG - chr4.4:83392791-83392810 MS.gene89794:CDS 25.0%
! CTCGTAAAAAATCTATGTAA+TGG + chr4.4:83391956-83391975 None:intergenic 25.0%
! GAATGAAATTGCAGAAAAAA+AGG + chr4.4:83392269-83392288 None:intergenic 25.0%
! GTAAAAAATCTATGTAATGG+GGG + chr4.4:83391953-83391972 None:intergenic 25.0%
! TTCTGTAAAGGTGAAATATT+TGG - chr4.4:83392200-83392219 MS.gene89794:intron 25.0%
! TTTATAATCAATTTGATCCC+CGG + chr4.4:83391607-83391626 None:intergenic 25.0%
!! AATAAACAGCCTAAGAATTT+TGG - chr4.4:83391121-83391140 MS.gene89794:CDS 25.0%
!! CGATCAAAATATTGTTTCTT+TGG + chr4.4:83392838-83392857 None:intergenic 25.0%
!!! AGCTAGTTTTATAGCAATTA+TGG + chr4.4:83391906-83391925 None:intergenic 25.0%
AAAAATGCGATTCGATTGTT+GGG - chr4.4:83391447-83391466 MS.gene89794:CDS 30.0%
ACAATGGGATTAAAGATAGA+GGG - chr4.4:83392865-83392884 MS.gene89794:intron 30.0%
AGAAAATGGATCATTGTTTC+TGG - chr4.4:83391190-83391209 MS.gene89794:CDS 30.0%
AGAGCAACATTATATGGTAT+AGG - chr4.4:83392994-83393013 MS.gene89794:intron 30.0%
AGCAAAGAATTAGAAGAAAG+TGG + chr4.4:83393039-83393058 None:intergenic 30.0%
ATAAAATGCAGACAAATGCT+AGG - chr4.4:83392001-83392020 MS.gene89794:intron 30.0%
ATGTTAATGTTCCAAGTGAA+AGG - chr4.4:83392049-83392068 MS.gene89794:intron 30.0%
ATTCTTAGGCTGTTTATTAG+TGG + chr4.4:83391119-83391138 None:intergenic 30.0%
CACACAAAAACTTTACTTGT+TGG + chr4.4:83391040-83391059 None:intergenic 30.0%
CAGCAGTAAAATGGATATTA+AGG - chr4.4:83392504-83392523 MS.gene89794:intron 30.0%
GCCAAAATTGTATTTGTCAA+AGG + chr4.4:83392403-83392422 None:intergenic 30.0%
GCTAGTAAAATATGTATGCA+TGG + chr4.4:83392165-83392184 None:intergenic 30.0%
TAGTAATATGTAGTGTGTGA+TGG + chr4.4:83392784-83392803 None:intergenic 30.0%
TCACACACTACATATTACTA+TGG - chr4.4:83392784-83392803 MS.gene89794:CDS 30.0%
TTCTTAGGCTGTTTATTAGT+GGG + chr4.4:83391118-83391137 None:intergenic 30.0%
TTTGATCGTAATGTGACAAT+GGG - chr4.4:83392850-83392869 MS.gene89794:intron 30.0%
TTTGTCCACTAATACTTTGA+GGG + chr4.4:83390726-83390745 None:intergenic 30.0%
! ACATTTAAGTTAGGCAAGTA+AGG + chr4.4:83391415-83391434 None:intergenic 30.0%
! ACTTTCAAAGAAGTTGATTC+TGG + chr4.4:83393325-83393344 None:intergenic 30.0%
! AGAAACATGATTTTCGGTAT+AGG - chr4.4:83391504-83391523 MS.gene89794:CDS 30.0%
! GATTTGGTATAATCCTTATG+AGG - chr4.4:83391469-83391488 MS.gene89794:CDS 30.0%
! GCCTTTGACAAATACAATTT+TGG - chr4.4:83392399-83392418 MS.gene89794:intron 30.0%
! TAGCATTTGTCTGCATTTTA+TGG + chr4.4:83392002-83392021 None:intergenic 30.0%
! TCTAGTCGATTTAATAGATC+AGG - chr4.4:83391675-83391694 MS.gene89794:CDS 30.0%
! TGGTAATTTGTACAAAAGTG+TGG - chr4.4:83392666-83392685 MS.gene89794:intron 30.0%
! TTTTGATCGTAATGTGACAA+TGG - chr4.4:83392849-83392868 MS.gene89794:intron 30.0%
!! AAAGAAGTTGATTCTGGTTT+AGG + chr4.4:83393319-83393338 None:intergenic 30.0%
!! GTTGTCTTTGTTATTGGATT+TGG + chr4.4:83392434-83392453 None:intergenic 30.0%
!!! GGTTAATCGTTGTTGTTTTA+AGG + chr4.4:83391885-83391904 None:intergenic 30.0%
!!! GTCAATGTTGATTCTGTTTT+AGG + chr4.4:83393349-83393368 None:intergenic 30.0%
AAATTGGTGGAAAACATGGA+TGG - chr4.4:83391747-83391766 MS.gene89794:intron 35.0%
AACGGATCAGAACATGTTAT+TGG - chr4.4:83392961-83392980 MS.gene89794:intron 35.0%
AAGGGAATAATGCCCAAAAT+GGG - chr4.4:83391156-83391175 MS.gene89794:CDS 35.0%
ACGTAAATTGGTGGAAAACA+TGG - chr4.4:83391743-83391762 MS.gene89794:intron 35.0%
AGCATGATATTTGCAGAGAA+CGG + chr4.4:83392081-83392100 None:intergenic 35.0%
AGCTTTACAATGGATCCTAA+TGG + chr4.4:83392616-83392635 None:intergenic 35.0%
CAAAAATGCGATTCGATTGT+TGG - chr4.4:83391446-83391465 MS.gene89794:CDS 35.0%
CAAAATCTTCATTGTTCCTG+TGG - chr4.4:83391088-83391107 MS.gene89794:CDS 35.0%
CAAGATTTACCTTGACTAGT+GGG - chr4.4:83393242-83393261 MS.gene89794:CDS 35.0%
CATCAGAGTCCAAAATTCTT+AGG + chr4.4:83391133-83391152 None:intergenic 35.0%
GACAATGGGATTAAAGATAG+AGG - chr4.4:83392864-83392883 MS.gene89794:intron 35.0%
GGTAAGAATAACATGAACCT+AGG + chr4.4:83392316-83392335 None:intergenic 35.0%
GTATAGGAATAGACAAACCA+TGG - chr4.4:83391520-83391539 MS.gene89794:CDS 35.0%
GTGAAGAGAGCAACATTATA+TGG - chr4.4:83392988-83393007 MS.gene89794:intron 35.0%
GTTTGTCCACTAATACTTTG+AGG + chr4.4:83390727-83390746 None:intergenic 35.0%
TCAAGATTTACCTTGACTAG+TGG - chr4.4:83393241-83393260 MS.gene89794:CDS 35.0%
TGTTTGATGTTTCCAAGGAA+CGG + chr4.4:83390890-83390909 None:intergenic 35.0%
TTAATCTCATCGACCTCATA+AGG + chr4.4:83391485-83391504 None:intergenic 35.0%
TTCACTTCAAGATCATCAAG+AGG + chr4.4:83393087-83393106 None:intergenic 35.0%
TTCATGCACAATTCTTCACA+GGG + chr4.4:83390998-83391017 None:intergenic 35.0%
TTGTCCACTAATACTTTGAG+GGG + chr4.4:83390725-83390744 None:intergenic 35.0%
! ACATTCGAAAGAGTTGATTC+TGG + chr4.4:83393295-83393314 None:intergenic 35.0%
! ACTAGCTCTCTTTCAATCTT+AGG - chr4.4:83391919-83391938 MS.gene89794:intron 35.0%
! ATCCATTTTACTGCTGTTAC+TGG + chr4.4:83392500-83392519 None:intergenic 35.0%
! ATGCAGATGTTGATTGAATC+CGG - chr4.4:83391257-83391276 MS.gene89794:CDS 35.0%
! CACAGGAACAATGAAGATTT+TGG + chr4.4:83391090-83391109 None:intergenic 35.0%
! CTAAGAATTTTGGACTCTGA+TGG - chr4.4:83391131-83391150 MS.gene89794:CDS 35.0%
! TCCATTTTACTGCTGTTACT+GGG + chr4.4:83392499-83392518 None:intergenic 35.0%
! TCTTACAAAGACCCCATTTT+GGG + chr4.4:83391171-83391190 None:intergenic 35.0%
! TGCAGTCGATACAAATGTTT+TGG + chr4.4:83392928-83392947 None:intergenic 35.0%
!! GAAAGAGTTGATTCTGGTTT+AGG + chr4.4:83393289-83393308 None:intergenic 35.0%
!! TTGTTGTTTCTCATTGCTGT+TGG + chr4.4:83390852-83390871 None:intergenic 35.0%
!!! AGTTAAGGTTTTGAACGGTT+TGG + chr4.4:83390919-83390938 None:intergenic 35.0%
!!! GTCTGAGTTAAGGTTTTGAA+CGG + chr4.4:83390924-83390943 None:intergenic 35.0%
!!! TTTATTAGTGGGTTTTCCAC+AGG + chr4.4:83391107-83391126 None:intergenic 35.0%
AACGGATCTATCCTTTCACT+TGG + chr4.4:83392063-83392082 None:intergenic 40.0%
AATCAATTTGATCCCCGGAT+TGG + chr4.4:83391602-83391621 None:intergenic 40.0%
AATTCTTCACAGGGATTCCT+AGG + chr4.4:83390989-83391008 None:intergenic 40.0%
ACACAACATTGGCAAGAAAG+AGG - chr4.4:83391313-83391332 MS.gene89794:CDS 40.0%
ACACATCCAGCAAAAGAGTT+AGG + chr4.4:83392646-83392665 None:intergenic 40.0%
ACCTTAACTCAGACGATGTT+TGG - chr4.4:83390930-83390949 MS.gene89794:intron 40.0%
AGGAGTGATTTCTAAGTCAC+GGG - chr4.4:83392888-83392907 MS.gene89794:intron 40.0%
AGGATCCATTGTAAAGCTTG+TGG - chr4.4:83392618-83392637 MS.gene89794:intron 40.0%
AGGGAATAATGCCCAAAATG+GGG - chr4.4:83391157-83391176 MS.gene89794:CDS 40.0%
AGTTTCCTATCTCTTCCACT+TGG - chr4.4:83390803-83390822 MS.gene89794:CDS 40.0%
ATGGGATTAAAGATAGAGGG+AGG - chr4.4:83392868-83392887 MS.gene89794:intron 40.0%
ATTTGTCAAAGGCTCATGAG+AGG + chr4.4:83392392-83392411 None:intergenic 40.0%
CAAGGGAATAATGCCCAAAA+TGG - chr4.4:83391155-83391174 MS.gene89794:CDS 40.0%
CTTCAAGATCATCAAGAGGA+AGG + chr4.4:83393083-83393102 None:intergenic 40.0%
CTTCATGCACAATTCTTCAC+AGG + chr4.4:83390999-83391018 None:intergenic 40.0%
GAAGTGAAGCTGATAAGCAT+TGG - chr4.4:83393099-83393118 MS.gene89794:CDS 40.0%
GAGGAGTGATTTCTAAGTCA+CGG - chr4.4:83392887-83392906 MS.gene89794:intron 40.0%
GAGTCGCTTAGATTTATCCA+TGG + chr4.4:83391540-83391559 None:intergenic 40.0%
GATTGAGTAACACAGAAACC+GGG + chr4.4:83392702-83392721 None:intergenic 40.0%
GGATCCATTGTAAAGCTTGT+GGG - chr4.4:83392619-83392638 MS.gene89794:intron 40.0%
GGATTCAATCAACATCTGCA+TGG + chr4.4:83391258-83391277 None:intergenic 40.0%
GGATTGAGTAACACAGAAAC+CGG + chr4.4:83392703-83392722 None:intergenic 40.0%
GGGGTCTTTGTAAGAGAAAA+TGG - chr4.4:83391176-83391195 MS.gene89794:CDS 40.0%
TAACGTTGGACGTAAATTGG+TGG - chr4.4:83391734-83391753 MS.gene89794:intron 40.0%
TACAATGGATCCTAATGGCA+TGG + chr4.4:83392611-83392630 None:intergenic 40.0%
TCCAAACATCGTCTGAGTTA+AGG + chr4.4:83390934-83390953 None:intergenic 40.0%
TCTCTGCAAATATCATGCTG+CGG - chr4.4:83392082-83392101 MS.gene89794:intron 40.0%
TGCTAACGTTGGACGTAAAT+TGG - chr4.4:83391731-83391750 MS.gene89794:intron 40.0%
TTCAATCAACATCTGCATGG+AGG + chr4.4:83391255-83391274 None:intergenic 40.0%
TTGATGTCAAGAATGCTCCA+AGG + chr4.4:83393225-83393244 None:intergenic 40.0%
! AACTCTTTTGCTGGATGTGT+TGG - chr4.4:83392646-83392665 MS.gene89794:intron 40.0%
! ATTTTGGACTCTGATGGTCA+AGG - chr4.4:83391137-83391156 MS.gene89794:CDS 40.0%
! CCATTTTACTGCTGTTACTG+GGG + chr4.4:83392498-83392517 None:intergenic 40.0%
! CTCTTACAAAGACCCCATTT+TGG + chr4.4:83391172-83391191 None:intergenic 40.0%
! GATTCCCCTCAAAGTATTAG+TGG - chr4.4:83390718-83390737 MS.gene89794:CDS 40.0%
! GTTTCTGTGTTACTCAATCC+TGG - chr4.4:83392703-83392722 MS.gene89794:intron 40.0%
! TCTATGTAATGGGGGCATAA+TGG + chr4.4:83391945-83391964 None:intergenic 40.0%
! TGCAGATGTTGATTGAATCC+GGG - chr4.4:83391258-83391277 MS.gene89794:CDS 40.0%
! TTGTTTCTCATTGCTGTTGG+TGG + chr4.4:83390849-83390868 None:intergenic 40.0%
! TTTTGGACTCTGATGGTCAA+GGG - chr4.4:83391138-83391157 MS.gene89794:CDS 40.0%
!! AGAGGTGTTTGATGTTTCCA+AGG + chr4.4:83390895-83390914 None:intergenic 40.0%
AACAAATGCTGCTGCATCCT+AGG - chr4.4:83390969-83390988 MS.gene89794:CDS 45.0%
AACTGCTGACACGAATTGGT+TGG + chr4.4:83392461-83392480 None:intergenic 45.0%
AAGTGTGGAGAACTTGAACC+CGG - chr4.4:83392681-83392700 MS.gene89794:intron 45.0%
ACTGCTGACACGAATTGGTT+GGG + chr4.4:83392460-83392479 None:intergenic 45.0%
AGCTTCCTTACCATGCCATT+AGG - chr4.4:83392598-83392617 MS.gene89794:intron 45.0%
AGGTCCCACAAGCTTTACAA+TGG + chr4.4:83392626-83392645 None:intergenic 45.0%
AGGTTAAGGCATACTTGAGG+AGG + chr4.4:83392372-83392391 None:intergenic 45.0%
AGTGCTTCAGGAATGTTGAG+TGG + chr4.4:83392760-83392779 None:intergenic 45.0%
CAAAGGCTCATGAGAGGTTA+AGG + chr4.4:83392386-83392405 None:intergenic 45.0%
CACGAAATGGTTGCTAACGT+TGG - chr4.4:83391720-83391739 MS.gene89794:intron 45.0%
CACTAACTGCTGACACGAAT+TGG + chr4.4:83392465-83392484 None:intergenic 45.0%
CCCCAGTAACAGCAGTAAAA+TGG - chr4.4:83392495-83392514 MS.gene89794:intron 45.0%
CGTTTCTGACTCTTGTTGAG+AGG + chr4.4:83390699-83390718 None:intergenic 45.0%
CTGATCCGTTGACAGATCTA+GGG + chr4.4:83392951-83392970 None:intergenic 45.0%
CTGGTTTAGGCACACTCAAA+AGG + chr4.4:83393276-83393295 None:intergenic 45.0%
GAGAGGTTAAGGCATACTTG+AGG + chr4.4:83392375-83392394 None:intergenic 45.0%
GAGGAAGTCACACACAACAT+TGG - chr4.4:83391302-83391321 MS.gene89794:CDS 45.0%
GCGATTCGATTGTTGGGATT+TGG - chr4.4:83391453-83391472 MS.gene89794:CDS 45.0%
GGAGTGATTTCTAAGTCACG+GGG - chr4.4:83392889-83392908 MS.gene89794:intron 45.0%
GTCTTTAAGCCCACTAGTCA+AGG + chr4.4:83393254-83393273 None:intergenic 45.0%
TCCAGACTTGACTCAACTAG+AGG - chr4.4:83391283-83391302 MS.gene89794:CDS 45.0%
TCCTCTAGTTGAGTCAAGTC+TGG + chr4.4:83391287-83391306 None:intergenic 45.0%
TCTGATCCGTTGACAGATCT+AGG + chr4.4:83392952-83392971 None:intergenic 45.0%
TGCAGACAAATGCTAGGATG+TGG - chr4.4:83392007-83392026 MS.gene89794:intron 45.0%
TGGATCCTAATGGCATGGTA+AGG + chr4.4:83392606-83392625 None:intergenic 45.0%
TTGAGTCAAGTCTGGATACC+CGG + chr4.4:83391279-83391298 None:intergenic 45.0%
! ATTTGATCCCCGGATTGGAT+CGG + chr4.4:83391597-83391616 None:intergenic 45.0%
! TGGTTTGGACAACCAAACTG+TGG + chr4.4:83392736-83392755 None:intergenic 45.0%
! TTCACGAAGCACTCACGAAA+TGG - chr4.4:83391707-83391726 MS.gene89794:intron 45.0%
!! GCTGATAAGCATTGGTGAAG+CGG - chr4.4:83393107-83393126 MS.gene89794:CDS 45.0%
!! GGGTGGGTTGTCTTTGTTAT+TGG + chr4.4:83392440-83392459 None:intergenic 45.0%
!!! GGTTTTGAACGGTTTGGTAG+AGG + chr4.4:83390913-83390932 None:intergenic 45.0%
AGTTTGTCCCGATCCAATCC+GGG - chr4.4:83391586-83391605 MS.gene89794:CDS 50.0%
CCTGGTATAGCACCACAGTT+TGG - chr4.4:83392721-83392740 MS.gene89794:intron 50.0%
CTGACACGAATTGGTTGGGT+GGG + chr4.4:83392456-83392475 None:intergenic 50.0%
CTGCAAATATCATGCTGCGG+TGG - chr4.4:83392085-83392104 MS.gene89794:intron 50.0%
CTGCACCCTAGATCTGTCAA+CGG - chr4.4:83392943-83392962 MS.gene89794:intron 50.0%
CTTCAGGAATGTTGAGTGGC+TGG + chr4.4:83392756-83392775 None:intergenic 50.0%
GAGTTTGTCCCGATCCAATC+CGG - chr4.4:83391585-83391604 MS.gene89794:CDS 50.0%
GGTGGCTAAAAGACGAACGA+TGG + chr4.4:83390831-83390850 None:intergenic 50.0%
TCTGAGTCATCACCGTTCCT+TGG - chr4.4:83390875-83390894 MS.gene89794:intron 50.0%
TTACTGCTGTTACTGGGGCA+GGG + chr4.4:83392493-83392512 None:intergenic 50.0%
TTTACTGCTGTTACTGGGGC+AGG + chr4.4:83392494-83392513 None:intergenic 50.0%
! GGAATGTTGAGTGGCTGGTT+TGG + chr4.4:83392751-83392770 None:intergenic 50.0%
! GTGGGACCTAACTCTTTTGC+TGG - chr4.4:83392637-83392656 MS.gene89794:intron 50.0%
! GTGTGTGATGGTAGTGCTTC+AGG + chr4.4:83392772-83392791 None:intergenic 50.0%
! TGGTGCCAAGTGGAAGAGAT+AGG + chr4.4:83390811-83390830 None:intergenic 50.0%
! TTTGATCCCCGGATTGGATC+GGG + chr4.4:83391596-83391615 None:intergenic 50.0%
!! CCAAACTGTGGTGCTATACC+AGG + chr4.4:83392724-83392743 None:intergenic 50.0%
!! GATAAGCATTGGTGAAGCGG+AGG - chr4.4:83393110-83393129 MS.gene89794:CDS 50.0%
GCTGACACGAATTGGTTGGG+TGG + chr4.4:83392457-83392476 None:intergenic 55.0%
GTGTAGGCTTTGCGCTTCCT+TGG - chr4.4:83393205-83393224 MS.gene89794:CDS 55.0%
GTTTGTCCCGATCCAATCCG+GGG - chr4.4:83391587-83391606 MS.gene89794:CDS 55.0%
! AGACGAACGATGGTGCCAAG+TGG + chr4.4:83390821-83390840 None:intergenic 55.0%


Chromosome Type Strat End Strand Name
chr4.4 gene 83390692 83393378 83390692 ID=MS.gene89794
chr4.4 mRNA 83390692 83393378 83390692 ID=MS.gene89794.t1;Parent=MS.gene89794
chr4.4 exon 83393027 83393378 83393027 ID=MS.gene89794.t1.exon1;Parent=MS.gene89794.t1
chr4.4 CDS 83393027 83393378 83393027 ID=cds.MS.gene89794.t1;Parent=MS.gene89794.t1
chr4.4 exon 83392736 83392830 83392736 ID=MS.gene89794.t1.exon2;Parent=MS.gene89794.t1
chr4.4 CDS 83392736 83392830 83392736 ID=cds.MS.gene89794.t1;Parent=MS.gene89794.t1
chr4.4 exon 83390939 83391709 83390939 ID=MS.gene89794.t1.exon3;Parent=MS.gene89794.t1
chr4.4 CDS 83390939 83391709 83390939 ID=cds.MS.gene89794.t1;Parent=MS.gene89794.t1
chr4.4 exon 83390692 83390859 83390692 ID=MS.gene89794.t1.exon4;Parent=MS.gene89794.t1
chr4.4 CDS 83390692 83390859 83390692 ID=cds.MS.gene89794.t1;Parent=MS.gene89794.t1
Gene Sequence

>MS.gene89794

ATGGCCTCTCAACAAGAGTCAGAAACGATTCCCCTCAAAGTATTAGTGGACAAACAAAGAAATAAAGTTGTTTTTGTAGAAGCAACAAAAGACTTTGTTGACACTCTCTTCAGTTTCCTATCTCTTCCACTTGGCACCATCGTTCGTCTTTTAGCCACCAACAGCAATGAGAAACAACAACAATCTGAGTCATCACCGTTCCTTGGAAACATCAAACACCTCTACCAAACCGTTCAAAACCTTAACTCAGACGATGTTTGGAACAACAATGTATGCAAACAAATGCTGCTGCATCCTAGGAATCCCTGTGAAGAATTGTGCATGAAGTTGTTCTTGAATGTTGAGCCAACAAGTAAAGTTTTTGTGTGTGATTCTTGTAACGTGTTTACTACTTTCCAAAATCTTCATTGTTCCTGTGGAAAACCCACTAATAAACAGCCTAAGAATTTTGGACTCTGATGGTCAAGGGAATAATGCCCAAAATGGGGTCTTTGTAAGAGAAAATGGATCATTGTTTCTGGTGTCTGATGATTTGAAGATTGTGACAGACTCTTTGCTGTCCTCCATGCAGATGTTGATTGAATCCGGGTATCCAGACTTGACTCAACTAGAGGAAGTCACACACAACATTGGCAAGAAAGAGGTAATCATTGTGTTGTGTTGTCTTTTGTTTGATGTCACTATTCCCGTTTTTTCTTTTTATTATCAAGGTATAGATCGCCTTACTTGCCTAACTTAAATGTCTCATATTTCTCAAAAATGCGATTCGATTGTTGGGATTTGGTATAATCCTTATGAGGTCGATGAGATTAAGAAACATGATTTTCGGTATAGGAATAGACAAACCATGGATAAATCTAAGCGACTCTTAAATCTAAACAATCTTTTTGTAGGAGTTTGTCCCGATCCAATCCGGGGATCAAATTGATTATAAAAACATGAATTTACTTTATTGATTTATTTACCTACATGGAAAAATATTATCTAGTCGATTTAATAGATCAGGACGTAAAAATTCACGAAGCACTCACGAAATGGTTGCTAACGTTGGACGTAAATTGGTGGAAAACATGGATGGTTAGATAAAAAAAGAGTGTGTGCAACATGTTACAATAAAAACTGTCAAAGCTGTCGTGATGATTTCACTATAAAGTTGTCGCGAGAAGTAGCATTATCGTTTAATAGATTAACCTTAAAACAACAACGATTAACCATAATTGCTATAAAACTAGCTCTCTTTCAATCTTAGGCCATTATGCCCCCATTACATAGATTTTTTACGAGCATAGTATCTTTCATCTTTATTGCCATAAAATGCAGACAAATGCTAGGATGTGGAGTTTTAGATGCAAACATCATGTTAATGTTCCAAGTGAAAGGATAGATCCGTTCTCTGCAAATATCATGCTGCGGTGGTTCCTTTTTATTTTTGCTTTTATGTTTTTTAGTTTTGTGTAAAGACTTGTCAATCCATGCATACATATTTTACTAGCTCAAAAATTAAAAACTTCTGTAAAGGTGAAATATTTGGAGACATATCTCCTATTTTCATTCTTTCATTCAATATAAAATTTCCTTTTTTTCTGCAATTTCATTCAATTAATTTTCAATTTTTTTTCTTCCTAGGTTCATGTTATTCTTACCTTTTGTGTTTTAACATTTTGTACAGATACTGAACCTCCTCAAGTATGCCTTAACCTCTCATGAGCCTTTGACAAATACAATTTTGGCAACTAGCTCCAAATCCAATAACAAAGACAACCCACCCAACCAATTCGTGTCAGCAGTTAGTGTAACTCCCTGCCCCAGTAACAGCAGTAAAATGGATATTAAGGTATTACAAAGTAAATCTCAGAAAAAGATTATCATTGCAGAAGCTGATGAAGATTTTGTTGACTTCATTTTTAGCTTCCTTACCATGCCATTAGGATCCATTGTAAAGCTTGTGGGACCTAACTCTTTTGCTGGATGTGTTGGTAATTTGTACAAAAGTGTGGAGAACTTGAACCCGGTTTCTGTGTTACTCAATCCTGGTATAGCACCACAGTTTGGTTGTCCAAACCAGCCACTCAACATTCCTGAAGCACTACCATCACACACTACATATTACTATGGTATAGGGACATCAAACAAACAGTTGACACCAAAGAAACAATATTTTGATCGTAATGTGACAATGGGATTAAAGATAGAGGGAGGAGTGATTTCTAAGTCACGGGGATCAATTTATAGTCCAAAACATTTGTATCGACTGCACCCTAGATCTGTCAACGGATCAGAACATGTTATTGGATTTGTGAAGAGAGCAACATTATATGGTATAGGAGATGATCTAAAAGTAAAACCACTTTCTTCTAATTCTTTGCTTTCATATTTGAAAGTATTAAGCCTTCCTCTTGATGATCTTGAAGTGAAGCTGATAAGCATTGGTGAAGCGGAGGTAATGTGTCTATCATTGATCACTAAATAATTTTTTTTTGTTATTATAGCCTCTTTGATTCACTTTAATTGTTGTGTAGGCTTTGCGCTTCCTTGGAGCATTCTTGACATCAAGATTTACCTTGACTAGTGGGCTTAAAGACCTTTTGAGTGTGCCTAAACCAGAATCAACTCTTTCGAATGTGCCTAAACCAGAATCAACTTCTTTGAAAGTTCCTAAAACAGAATCAACATTGACATCAAAGTAA
Protein sequence

>MS.gene89794.t1

MASQQESETIPLKVLVDKQRNKVVFVEATKDFVDTLFSFLSLPLGTIVRLLATNSNEKQQQSESSPFLGNIKHLYQTVQNLNSDDVWNNNVCKQMLLHPRNPCEELCMKLFLNVEPTNSLLSSMQMLIESGYPDLTQLEEVTHNIGKKEILNLLKYALTSHEPLTNTILATSSKSNNKDNPPNQFVSAVSVTPCPSNSSKMDIKVLQSKSQKKIIIAEADEDFVDFIFSFLTMPLGSIVKLVGPNSFAGCVGNLYKSVENLNPVSVLLNPGIAPQFGCPNQPLNIPEALPSHTTYYYGIGTSNKQLTPKKQYFDRNVTMGLKIEGGVISKSRGSIYSPKHLYRLHPRSVNGSEHVIGFVKRATLYGIGDDLKVKPLSSNSLLSYLKVLSLPLDDLEVKLISIGEAEALRFLGAFLTSRFTLTSGLKDLLSVPKPESTLSNVPKPESTSLKVPKTESTLTSK