AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene068391

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene068391.t1 MTR_4g017830 89.770 479 46 2 1 477 1 478 0.0 862
MS.gene068391.t1 MTR_4g019340 73.849 478 90 6 11 477 37 490 0.0 681
MS.gene068391.t1 MTR_4g017440 67.925 477 141 5 7 477 9 479 0.0 634
MS.gene068391.t1 MTR_4g017410 64.898 490 130 9 1 477 1 461 0.0 596
MS.gene068391.t1 MTR_4g017470 62.963 486 132 6 1 477 1 447 0.0 572
MS.gene068391.t1 MTR_4g017550 65.541 444 137 8 39 477 18 450 0.0 551
MS.gene068391.t1 MTR_4g017550 29.412 255 132 11 6 239 242 469 2.78e-14 75.5
MS.gene068391.t1 MTR_4g017610 57.829 479 177 7 1 477 1 456 0.0 528
MS.gene068391.t1 MTR_4g019310 40.204 490 256 14 1 477 1 466 3.22e-105 322
MS.gene068391.t1 MTR_4g019310 27.376 263 155 10 1 246 250 493 1.37e-13 73.2
MS.gene068391.t1 MTR_7g066340 34.280 493 245 14 1 477 1 430 3.24e-74 241
MS.gene068391.t1 MTR_7g066260 34.694 490 247 15 4 477 7 439 1.02e-73 241
MS.gene068391.t1 MTR_7g066350 32.712 483 251 12 8 477 5 426 4.08e-72 236
MS.gene068391.t1 MTR_7g066570 34.791 503 256 17 1 477 1 457 3.81e-71 236
MS.gene068391.t1 MTR_7g058710 32.200 500 270 15 1 477 1 454 5.56e-67 223
MS.gene068391.t1 MTR_7g066430 35.124 484 269 14 13 477 5 462 2.17e-65 219
MS.gene068391.t1 MTR_7g066410 35.200 500 268 18 13 477 11 489 3.60e-65 219
MS.gene068391.t1 MTR_7g066410 26.210 248 154 6 5 239 277 508 2.10e-11 66.2
MS.gene068391.t1 MTR_7g063900 32.525 495 280 17 1 477 1 459 1.50e-62 211
MS.gene068391.t1 MTR_1g041315 31.864 499 257 15 3 477 5 444 2.90e-61 208
MS.gene068391.t1 MTR_7g066400 32.444 487 246 15 1 477 1 414 1.60e-60 205
MS.gene068391.t1 MTR_7g066400 26.809 235 138 5 5 239 233 433 9.00e-11 64.3
MS.gene068391.t1 MTR_7g012680 32.311 489 244 15 4 477 6 422 5.23e-59 201
MS.gene068391.t1 MTR_7g066360 34.012 491 241 18 2 477 4 426 2.37e-58 200
MS.gene068391.t1 MTR_7g063660 31.481 486 280 17 1 474 1 445 1.26e-55 192
MS.gene068391.t1 MTR_7g066290 35.753 372 208 10 3 359 6 361 1.22e-54 189
MS.gene068391.t1 MTR_7g066580 30.608 477 259 17 18 477 1 422 1.74e-54 189
MS.gene068391.t1 MTR_7g062280 31.014 503 280 18 1 477 1 462 1.09e-53 187
MS.gene068391.t1 MTR_7g063890 30.372 484 293 16 4 474 20 472 1.62e-51 182
MS.gene068391.t1 MTR_7g063880 31.211 487 277 20 1 477 1 439 1.64e-51 181
MS.gene068391.t1 MTR_7g062300 30.707 495 280 17 1 477 1 450 3.18e-51 181
MS.gene068391.t1 MTR_4g019240 74.797 123 27 3 1 121 1 121 3.42e-51 172
MS.gene068391.t1 MTR_7g063830 32.987 385 217 10 1 370 1 359 5.03e-50 177
MS.gene068391.t1 MTR_7g063840 30.000 490 284 17 1 477 1 444 5.00e-49 175
MS.gene068391.t1 MTR_7g063820 30.550 491 291 16 1 477 1 455 2.00e-45 165
MS.gene068391.t1 MTR_7g066310 28.512 477 205 16 13 477 8 360 3.87e-44 160
MS.gene068391.t1 MTR_2g029400 28.211 475 244 10 8 477 10 392 3.76e-42 155
MS.gene068391.t1 MTR_3g065200 28.814 472 252 16 13 477 4 398 1.76e-41 154
MS.gene068391.t1 MTR_7g066480 35.694 353 188 13 13 350 17 345 3.48e-41 152
MS.gene068391.t1 MTR_7g058700 31.844 358 164 13 24 351 531 838 1.92e-40 155
MS.gene068391.t1 MTR_7g063920 28.067 481 268 14 1 477 1 407 4.91e-40 149
MS.gene068391.t1 MTR_7g063670 29.592 490 267 16 1 477 4 428 6.70e-40 149
MS.gene068391.t1 MTR_3g007740 29.317 498 252 19 1 477 1 419 2.86e-37 142
MS.gene068391.t1 MTR_7g066490 32.558 344 197 11 13 350 17 331 5.45e-34 132
MS.gene068391.t1 MTR_7g066280 27.586 406 229 13 98 477 1 367 7.61e-32 126
MS.gene068391.t1 MTR_7g066680 32.453 265 155 6 220 477 37 284 3.16e-26 109
MS.gene068391.t1 MTR_1g014060 35.185 216 112 8 21 226 9 206 1.73e-23 102
MS.gene068391.t1 MTR_1g115440 31.746 252 146 9 1 241 1 237 1.72e-22 96.7
MS.gene068391.t1 MTR_1g115440 29.224 219 133 6 268 477 11 216 1.16e-14 73.9
MS.gene068391.t1 MTR_4g019350 48.000 100 40 2 326 424 1 89 4.47e-21 87.8
MS.gene068391.t1 MTR_8g445860 31.452 248 145 8 1 241 7 236 6.34e-21 92.0
MS.gene068391.t1 MTR_8g445860 29.778 225 127 5 265 477 10 215 1.38e-18 85.5
MS.gene068391.t1 MTR_7g062270 36.098 205 103 11 1 196 1 186 2.19e-20 93.2
MS.gene068391.t1 MTR_7g062270 31.414 191 102 7 272 455 14 182 7.82e-14 73.6
MS.gene068391.t1 MTR_7g100420 33.208 265 146 10 220 477 134 374 8.92e-20 91.7
MS.gene068391.t1 MTR_8g023240 22.481 387 235 11 6 370 31 374 3.23e-19 90.9
MS.gene068391.t1 MTR_0150s0010 29.365 252 151 7 1 241 1 236 3.39e-18 84.3
MS.gene068391.t1 MTR_0150s0010 29.493 217 135 8 268 477 10 215 9.51e-15 74.3
MS.gene068391.t1 MTR_7g063720 28.505 214 118 5 267 477 22 203 1.44e-17 82.4
MS.gene068391.t1 MTR_1g115455 35.714 140 69 5 1 135 1 124 3.18e-15 75.5
MS.gene068391.t1 MTR_1g115455 41.463 82 46 1 265 344 6 87 4.73e-13 68.9
MS.gene068391.t1 MTR_1g115450 45.122 82 43 1 265 344 4 85 1.03e-14 71.6
MS.gene068391.t1 MTR_1g115450 35.200 125 64 3 1 125 1 108 7.42e-13 66.2
MS.gene068391.t1 MTR_6g006800 57.895 57 16 1 3 59 2 50 1.70e-13 65.9
MS.gene068391.t1 MTR_8g445920 48.387 62 32 0 268 329 10 71 6.53e-13 65.5
MS.gene068391.t1 MTR_8g044890 48.387 62 32 0 268 329 10 71 6.53e-13 65.5
MS.gene068391.t1 MTR_0150s0030 35.577 104 58 2 265 365 5 102 1.80e-12 67.0
MS.gene068391.t1 MTR_0150s0030 36.082 97 51 1 13 109 9 94 1.55e-11 63.9
MS.gene068391.t1 MTR_8g445910 36.538 104 57 2 265 365 5 102 3.11e-12 67.4
MS.gene068391.t1 MTR_8g044880 40.964 83 46 1 265 344 5 87 6.24e-12 66.6
MS.gene068391.t1 MTR_8g044880 26.148 283 140 11 13 241 9 276 2.15e-11 65.1
MS.gene068391.t1 MTR_1g115470 42.353 85 47 1 265 347 3 87 1.04e-11 67.0
MS.gene068391.t1 MTR_1g115470 41.964 112 50 5 15 124 9 107 8.38e-11 64.3
MS.gene068391.t1 MTR_1g115435 25.200 250 142 8 1 245 1 210 9.06e-11 62.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene068391.t1 AT5G43240 33.060 487 278 15 13 477 10 470 1.43e-60 207
MS.gene068391.t1 AT5G43240 33.060 487 278 15 13 477 10 470 1.43e-60 207
MS.gene068391.t1 AT5G43240 33.060 487 278 15 13 477 10 470 1.43e-60 207
MS.gene068391.t1 AT5G01120 31.393 481 298 11 9 477 6 466 1.52e-60 206
MS.gene068391.t1 AT5G01130 32.780 482 254 18 4 477 2 421 2.93e-56 194
MS.gene068391.t1 AT3G09140 31.337 501 276 17 9 477 6 470 5.93e-54 189
MS.gene068391.t1 AT5G01150 30.675 489 290 11 4 477 2 456 7.67e-50 177
MS.gene068391.t1 AT3G09140 29.679 529 276 18 9 477 6 498 9.34e-49 175
MS.gene068391.t1 AT3G09110 35.952 331 184 10 9 329 6 318 8.46e-48 168
MS.gene068391.t1 AT5G01140 30.928 485 266 19 2 477 4 428 1.63e-47 171
MS.gene068391.t1 AT3G09120 35.061 328 182 11 9 322 3 313 6.37e-46 162
MS.gene068391.t1 AT5G37320 29.091 495 286 18 7 477 3 456 1.14e-40 152
MS.gene068391.t1 AT5G43240 31.157 337 200 9 156 477 7 326 1.33e-31 125

Find 100 sgRNAs with CRISPR-Local

Find 305 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCACCCACTACTTGTTATTA+TGG 0.206586 4.2:-83844145 MS.gene068391:CDS
CAAATCCTTAGGCTGTTTAT+TGG 0.215333 4.2:+83847126 None:intergenic
TTTGACTTGTTTGAGGATCT+TGG 0.230164 4.2:+83843989 None:intergenic
GTGGAACGGTTGATGGAATT+AGG 0.243562 4.2:-83846989 MS.gene068391:CDS
AGGAGTGATTTCTAAGAAAA+AGG 0.256891 4.2:-83844050 MS.gene068391:CDS
CTCTGACTGCTGATGCAAAT+TGG 0.265259 4.2:+83844479 None:intergenic
CAATAAACAGCCTAAGGATT+TGG 0.285830 4.2:-83847125 MS.gene068391:CDS
ACTTTCCTTGCAATACCATT+AGG 0.290827 4.2:-83844346 MS.gene068391:CDS
CAGGGGAATGAGGTTCAAAA+TGG 0.309879 4.2:-83847091 MS.gene068391:CDS
CTTTCCTTGCAATACCATTA+GGG 0.321931 4.2:-83844345 MS.gene068391:CDS
CCCTCACTCCAAACGATGTT+TGG 0.334877 4.2:-83847324 MS.gene068391:CDS
TTCAGATTTGAGTAAGTTAG+AGG 0.335387 4.2:-83846963 MS.gene068391:CDS
AGGGTCTGTTGTAAAGCTTT+TGG 0.341615 4.2:-83844326 MS.gene068391:CDS
GGGATTCAATAGCATTTGTT+TGG 0.370299 4.2:+83847288 None:intergenic
AAAGCAACATTATATGCTAT+TGG 0.383153 4.2:-83843941 MS.gene068391:CDS
CATCGTTGTTTGTGGTTAAG+AGG 0.384127 4.2:+83847416 None:intergenic
ACTGCTGATGCAAATTGGTT+TGG 0.395154 4.2:+83844484 None:intergenic
ATAGCATTTGTTTGGAGAAA+GGG 0.411175 4.2:+83847296 None:intergenic
TAGTGTTCAGCGACTATAAT+GGG 0.412179 4.2:-83844105 MS.gene068391:CDS
TCCTTAGGCTGTTTATTGGT+GGG 0.414231 4.2:+83847130 None:intergenic
GGATTTGGATTCTGAGGGTC+AGG 0.417104 4.2:-83847110 MS.gene068391:CDS
TGTCATCAATATTCATGAAC+AGG 0.422631 4.2:+83847236 None:intergenic
GGGTTGTTCCAAACATCGTT+TGG 0.424240 4.2:+83847316 None:intergenic
AATAGCATTTGTTTGGAGAA+AGG 0.428428 4.2:+83847295 None:intergenic
CCTGGCCTATCACCACAGTT+TGG 0.428668 4.2:-83844205 MS.gene068391:CDS
CTAGTGTTCAGCGACTATAA+TGG 0.430095 4.2:-83844106 MS.gene068391:CDS
TGGAACGGTTGATGGAATTA+GGG 0.433049 4.2:-83846988 MS.gene068391:CDS
ATCCTTAGGCTGTTTATTGG+TGG 0.433708 4.2:+83847129 None:intergenic
TCCAGTGCAGTCAAGGCTCT+TGG 0.433952 4.2:+83844013 None:intergenic
GACCTCCGTGGAACGGTTGA+TGG 0.436015 4.2:-83846996 MS.gene068391:CDS
ACTACTTGTTATTATGGTAC+AGG 0.436855 4.2:-83844139 MS.gene068391:CDS
CAGAATCTTGATTGTACTTG+TGG 0.438965 4.2:-83847157 MS.gene068391:CDS
GTAGTGGGTGGTTGTACATC+AGG 0.459977 4.2:+83844157 None:intergenic
CCAAACATCGTTTGGAGTGA+GGG 0.462496 4.2:+83847324 None:intergenic
CGCTCGGTGTTACTCAATCC+TGG 0.464266 4.2:-83844223 MS.gene068391:CDS
AGGGGAATGAGGTTCAAAAT+GGG 0.466903 4.2:-83847090 MS.gene068391:CDS
ATGCAAGAATTATCAGAAAG+TGG 0.472857 4.2:+83843899 None:intergenic
GCTGATGCAAATTGGTTTGG+TGG 0.474643 4.2:+83844487 None:intergenic
TTGTTGATCATCGTTGTTTG+TGG 0.478260 4.2:+83847408 None:intergenic
GAGAGGTTAAGATGTATTTG+AGG 0.479701 4.2:+83844563 None:intergenic
AATCGTAGAAGATAAGATAG+AGG 0.485926 4.2:-83844074 MS.gene068391:CDS
TTGCATCAGCAGTCAGAGTA+AGG 0.490231 4.2:-83844474 MS.gene068391:CDS
GTACAAGACTGTTGAGACCT+TGG 0.502138 4.2:-83844269 MS.gene068391:CDS
GCCTAAGGATTTGGATTCTG+AGG 0.505495 4.2:-83847116 MS.gene068391:CDS
GACAACCAAACTGTGGTGAT+AGG 0.514005 4.2:+83844200 None:intergenic
TAGTCGCTGAACACTAGCTT+TGG 0.516019 4.2:+83844112 None:intergenic
TTCTGAGGGTCAGGGGAATG+AGG 0.516607 4.2:-83847101 MS.gene068391:CDS
TTGTGGCAAGAGGAAGAGAA+AGG 0.518911 4.2:+83847446 None:intergenic
CCTTCATTTCCAGATCATCA+AGG 0.519540 4.2:+83843849 None:intergenic
TCCTCAAACAAGTCAAAAGA+AGG 0.520771 4.2:-83843983 MS.gene068391:CDS
TTCAAAATTGTATTTGTCAG+AGG 0.520812 4.2:+83844535 None:intergenic
CCCTCAGAATCCAAATCCTT+AGG 0.521369 4.2:+83847115 None:intergenic
TCAGCATCGTCATCATTCCT+TGG 0.525365 4.2:-83847379 MS.gene068391:CDS
GTTTGGAGTGAGGGTTTGTA+CGG 0.532495 4.2:+83847333 None:intergenic
CTTGTGCACGGACTCGCGCT+CGG 0.532741 4.2:-83844239 MS.gene068391:CDS
AGCTTTACAACAGACCCTAA+TGG 0.534906 4.2:+83844331 None:intergenic
ACCAAGAGCCTTGACTGCAC+TGG 0.536046 4.2:-83844014 MS.gene068391:CDS
TCTTGGATCCAGTGCAGTCA+AGG 0.536451 4.2:+83844006 None:intergenic
ACCCACCAATAAACAGCCTA+AGG 0.544541 4.2:-83847131 MS.gene068391:CDS
ATTTGGATTCTGAGGGTCAG+GGG 0.552267 4.2:-83847108 MS.gene068391:CDS
CTTCATTTCCAGATCATCAA+GGG 0.555681 4.2:+83843850 None:intergenic
AGGTTAAGATGTATTTGAGG+AGG 0.555762 4.2:+83844566 None:intergenic
CTTGGACTCTTCCTTGTGCA+CGG 0.556068 4.2:-83844251 MS.gene068391:CDS
CGAGCGCGAGTCCGTGCACA+AGG 0.559536 4.2:+83844240 None:intergenic
CCTTGATGATCTGGAAATGA+AGG 0.561579 4.2:-83843849 MS.gene068391:CDS
CTTTGATGACCTCCGTGGAA+CGG 0.568765 4.2:-83847003 MS.gene068391:CDS
TCCAAACATCGTTTGGAGTG+AGG 0.570799 4.2:+83847323 None:intergenic
CTACTTGTTATTATGGTACA+GGG 0.573529 4.2:-83844138 MS.gene068391:CDS
AAGTCAAAAGAAGGTGCTGT+GGG 0.574510 4.2:-83843974 MS.gene068391:CDS
GGAATGTTGAGGAGCTGTGT+TGG 0.576278 4.2:+83844178 None:intergenic
GATTTGGATTCTGAGGGTCA+GGG 0.578112 4.2:-83847109 MS.gene068391:CDS
CCAAACTGTGGTGATAGGCC+AGG 0.582098 4.2:+83844205 None:intergenic
GTAGAAGATAAGATAGAGGG+AGG 0.588193 4.2:-83844070 MS.gene068391:CDS
ATCGTAGAAGATAAGATAGA+GGG 0.588750 4.2:-83844073 MS.gene068391:CDS
CAAGTCAAAAGAAGGTGCTG+TGG 0.590675 4.2:-83843975 MS.gene068391:CDS
CCTAAGGATTTGGATTCTGA+GGG 0.593985 4.2:-83847115 MS.gene068391:CDS
GAGGAAGTCACACATAACAT+TGG 0.598986 4.2:-83846944 MS.gene068391:CDS
TGTACCATAATAACAAGTAG+TGG 0.600592 4.2:+83844141 None:intergenic
CGTGCACAAGGAAGAGTCCA+AGG 0.613164 4.2:+83844252 None:intergenic
GAAATGAAGGTGATAAGCAT+TGG 0.620399 4.2:-83843836 MS.gene068391:CDS
ACATAACATTGGAAAGCAAG+AGG 0.622679 4.2:-83846933 MS.gene068391:intron
GGTTAAGAGGCGAATGATTG+TGG 0.625715 4.2:+83847429 None:intergenic
GTACCATAATAACAAGTAGT+GGG 0.629726 4.2:+83844142 None:intergenic
TAATTCCATCAACCGTTCCA+CGG 0.636089 4.2:+83846991 None:intergenic
TTGTTCTTTGATGACCTCCG+TGG 0.636160 4.2:-83847008 MS.gene068391:CDS
TTCATTTCCAGATCATCAAG+GGG 0.637868 4.2:+83843851 None:intergenic
GATAAGCATTGGTGAAGCTG+AGG 0.638424 4.2:-83843825 None:intergenic
AGGCGAATGATTGTGGCAAG+AGG 0.638660 4.2:+83847436 None:intergenic
AAGGAATGATGACGATGCTG+AGG 0.639023 4.2:+83847381 None:intergenic
GGGTTTGTACGGTTTCGTAG+AGG 0.642583 4.2:+83847344 None:intergenic
GGGGAATGAGGTTCAAAATG+GGG 0.661152 4.2:-83847089 MS.gene068391:CDS
ACGGAGGTCATCAAAGAACA+AGG 0.673460 4.2:+83847010 None:intergenic
ATTTGTCAGAGGCTCATGAG+AGG 0.675408 4.2:+83844546 None:intergenic
CCATAATAACAAGTAGTGGG+TGG 0.678221 4.2:+83844145 None:intergenic
CAGACCCTAATGGTATTGCA+AGG 0.678878 4.2:+83844341 None:intergenic
TTCATGCACAGTGATTCACA+TGG 0.689658 4.2:+83847259 None:intergenic
GTTGTACATCAGGAATGTTG+AGG 0.692196 4.2:+83844167 None:intergenic
TTCCATCAACCGTTCCACGG+AGG 0.726289 4.2:+83846994 None:intergenic
TCATTTCCAGATCATCAAGG+GGG 0.747642 4.2:+83843852 None:intergenic
TGTGTTGGACAACCAAACTG+TGG 0.775969 4.2:+83844193 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTAAAAAACATTCACAATTT+GGG - chr4.2:83846283-83846302 MS.gene068391:intron 15.0%
!! TTTAAAAAACATTCACAATT+TGG - chr4.2:83846282-83846301 MS.gene068391:intron 15.0%
!!! GTATTTTAAATAGGTTATAT+TGG - chr4.2:83846736-83846755 MS.gene068391:intron 15.0%
!!! TGTGTATTTTGTTTTATTTT+TGG - chr4.2:83844527-83844546 MS.gene068391:CDS 15.0%
!! AAATTGGTAGAAAAAATAGA+GGG - chr4.2:83845428-83845447 MS.gene068391:intron 20.0%
!! AAGTTAGTAAATGAGTTAAA+AGG - chr4.2:83846555-83846574 MS.gene068391:intron 20.0%
!! GAGAGAAAAAATAGAAATTA+GGG - chr4.2:83844999-83845018 MS.gene068391:intron 20.0%
!! TAAAAAAACACAGATTTGTA+AGG + chr4.2:83844802-83844821 None:intergenic 20.0%
!! TGAGAGAAAAAATAGAAATT+AGG - chr4.2:83844998-83845017 MS.gene068391:intron 20.0%
!!! AGATGATAATTTTTACTGAT+TGG - chr4.2:83846140-83846159 MS.gene068391:intron 20.0%
!!! ATGTTACTTACAAGTTATAT+TGG - chr4.2:83846399-83846418 MS.gene068391:intron 20.0%
!!! GGAAAAAGAAGAATTTTATT+AGG + chr4.2:83846043-83846062 None:intergenic 20.0%
!!! TAGTGAAAGGTATTTTAAAT+AGG - chr4.2:83846727-83846746 MS.gene068391:intron 20.0%
!!! TTGTTTTATTTTTGGAAACT+CGG - chr4.2:83844535-83844554 MS.gene068391:CDS 20.0%
!!! TTTAGAATTGTGTTGTTAAT+TGG - chr4.2:83845245-83845264 MS.gene068391:intron 20.0%
! AAAAGAAAGTGATAAACTCT+AGG + chr4.2:83845990-83846009 None:intergenic 25.0%
! AAAGAATAGAAAGGAAAGTA+AGG - chr4.2:83845850-83845869 MS.gene068391:intron 25.0%
! AAAGCAACATTATATGCTAT+TGG - chr4.2:83847456-83847475 MS.gene068391:CDS 25.0%
! AACAAAATAGAGAAAAACAG+AGG - chr4.2:83845508-83845527 MS.gene068391:intron 25.0%
! AACTTGTAAGTAACATTCAA+AGG + chr4.2:83846395-83846414 None:intergenic 25.0%
! AATGATTCATAATTACCCAA+AGG + chr4.2:83844923-83844942 None:intergenic 25.0%
! ACGTTTACCCTTTAAATTTA+TGG + chr4.2:83846260-83846279 None:intergenic 25.0%
! AGCATAAAAAGAGGTAATAA+AGG - chr4.2:83845466-83845485 MS.gene068391:intron 25.0%
! ATGAAGGAGAAATTTCTATT+TGG + chr4.2:83846182-83846201 None:intergenic 25.0%
! ATGCAAGATATTAAACCAAA+CGG + chr4.2:83846683-83846702 None:intergenic 25.0%
! GAAATTGGTAGAAAAAATAG+AGG - chr4.2:83845427-83845446 MS.gene068391:intron 25.0%
! GTAATTCAAATGATGCTATA+AGG + chr4.2:83844851-83844870 None:intergenic 25.0%
! TGGGTAATTATGAATCATTA+GGG - chr4.2:83844924-83844943 MS.gene068391:intron 25.0%
! TGGTGTACCATAAATTTAAA+GGG - chr4.2:83846250-83846269 MS.gene068391:intron 25.0%
! TTCAAAATTGTATTTGTCAG+AGG + chr4.2:83846865-83846884 None:intergenic 25.0%
! TTGGGTAATTATGAATCATT+AGG - chr4.2:83844923-83844942 MS.gene068391:intron 25.0%
!! CTGTCTATTAAAATTTTCAG+TGG + chr4.2:83843868-83843887 None:intergenic 25.0%
!! GAATAATCTAAGGTACAATT+GGG + chr4.2:83846210-83846229 None:intergenic 25.0%
!! GTATCAAAATGCTACTTAAA+CGG - chr4.2:83845726-83845745 MS.gene068391:intron 25.0%
!! TGAATAATCTAAGGTACAAT+TGG + chr4.2:83846211-83846230 None:intergenic 25.0%
!! TTGTTATTGCATTAAAATGC+GGG - chr4.2:83845133-83845152 MS.gene068391:intron 25.0%
!! TTTTTCTCTATTTTGTTGCT+TGG + chr4.2:83845505-83845524 None:intergenic 25.0%
!!! ATCTGTGTTTTTTTAGCTTT+TGG - chr4.2:83844807-83844826 MS.gene068391:intron 25.0%
!!! CTTGTTATTGCATTAAAATG+CGG - chr4.2:83845132-83845151 MS.gene068391:intron 25.0%
!!! GTTTTTCTATTTTAGAGTAG+TGG - chr4.2:83844768-83844787 MS.gene068391:intron 25.0%
AAAAAATAGAGGGAAAACAG+AGG - chr4.2:83845438-83845457 MS.gene068391:intron 30.0%
AACCTCAAAGGGAATTAATT+GGG - chr4.2:83846111-83846130 MS.gene068391:intron 30.0%
AATAGAAAGGAAAGTAAGGA+GGG - chr4.2:83845854-83845873 MS.gene068391:intron 30.0%
AATAGCATTTGTTTGGAGAA+AGG + chr4.2:83844105-83844124 None:intergenic 30.0%
AATCGTAGAAGATAAGATAG+AGG - chr4.2:83847323-83847342 MS.gene068391:CDS 30.0%
ACAAACTAACATGACATCAT+GGG + chr4.2:83845028-83845047 None:intergenic 30.0%
AGGTAATAAAGGAAAAACAG+AGG - chr4.2:83845477-83845496 MS.gene068391:intron 30.0%
ATAGCATTTGTTTGGAGAAA+GGG + chr4.2:83844104-83844123 None:intergenic 30.0%
ATCGTAGAAGATAAGATAGA+GGG - chr4.2:83847324-83847343 MS.gene068391:CDS 30.0%
ATGATTCTAAATTGCAGTTG+TGG - chr4.2:83845096-83845115 MS.gene068391:intron 30.0%
ATGCAAGAATTATCAGAAAG+TGG + chr4.2:83847501-83847520 None:intergenic 30.0%
CAACATTACAACTGCAATTT+CGG + chr4.2:83845168-83845187 None:intergenic 30.0%
CATCCAAAACCTTTATATTG+CGG - chr4.2:83845197-83845216 MS.gene068391:intron 30.0%
CCATAATCCATCTGTTATAT+TGG + chr4.2:83845763-83845782 None:intergenic 30.0%
CCATGTGATAAAGAATAGAA+AGG - chr4.2:83845841-83845860 MS.gene068391:intron 30.0%
CCTTTCTATTCTTTATCACA+TGG + chr4.2:83845844-83845863 None:intergenic 30.0%
CTGGTGTACCATAAATTTAA+AGG - chr4.2:83846249-83846268 MS.gene068391:intron 30.0%
CTTTAAATTTATGGTACACC+AGG + chr4.2:83846251-83846270 None:intergenic 30.0%
GTACCATAATAACAAGTAGT+GGG + chr4.2:83847258-83847277 None:intergenic 30.0%
TACAAACTAACATGACATCA+TGG + chr4.2:83845029-83845048 None:intergenic 30.0%
TCAGTATCTGTTACATCAAA+AGG + chr4.2:83846810-83846829 None:intergenic 30.0%
TGAAAATGCCTATAACGATT+TGG - chr4.2:83844876-83844895 MS.gene068391:intron 30.0%
TGTACCATAATAACAAGTAG+TGG + chr4.2:83847259-83847278 None:intergenic 30.0%
TGTCATCAATATTCATGAAC+AGG + chr4.2:83844164-83844183 None:intergenic 30.0%
TTAATGAATGCTCTCTTATC+AGG + chr4.2:83845815-83845834 None:intergenic 30.0%
TTCAGATTTGAGTAAGTTAG+AGG - chr4.2:83844434-83844453 MS.gene068391:CDS 30.0%
TTCCAAAACCAAATCGTTAT+AGG + chr4.2:83844887-83844906 None:intergenic 30.0%
! AGAATTGTGTTGTTAATTGG+TGG - chr4.2:83845248-83845267 MS.gene068391:intron 30.0%
! AGGAGTGATTTCTAAGAAAA+AGG - chr4.2:83847347-83847366 MS.gene068391:CDS 30.0%
! AGTGATTCACATGGATTTTT+GGG + chr4.2:83844132-83844151 None:intergenic 30.0%
! GGGTTTTTGTTAAGGAAAAT+GGG - chr4.2:83844328-83844347 MS.gene068391:CDS 30.0%
! TCAAAATGGGGTTTTTGTTA+AGG - chr4.2:83844320-83844339 MS.gene068391:CDS 30.0%
!! ACTACTTGTTATTATGGTAC+AGG - chr4.2:83847258-83847277 MS.gene068391:CDS 30.0%
!! ATTTTTGGAAACTCGGTATT+CGG - chr4.2:83844542-83844561 MS.gene068391:CDS 30.0%
!! CCAATATAACAGATGGATTA+TGG - chr4.2:83845760-83845779 MS.gene068391:intron 30.0%
!! CGCATTTTAATGCAATAACA+AGG + chr4.2:83845134-83845153 None:intergenic 30.0%
!! CTACTTGTTATTATGGTACA+GGG - chr4.2:83847259-83847278 MS.gene068391:CDS 30.0%
!! TAAGAGAGCATTCATTAAGA+AGG - chr4.2:83845817-83845836 MS.gene068391:intron 30.0%
AACACACTGTAAACACCTTT+GGG - chr4.2:83844905-83844924 MS.gene068391:intron 35.0%
AACTCTATCAGAACCTCAAA+GGG - chr4.2:83846100-83846119 MS.gene068391:intron 35.0%
AATGTAGTAGGAGGGAATAA+GGG - chr4.2:83845910-83845929 MS.gene068391:intron 35.0%
ACAGAGTAACAGAATGTAGT+AGG - chr4.2:83845898-83845917 MS.gene068391:intron 35.0%
ACATAACACAGTTCGTAAGT+AGG - chr4.2:83845377-83845396 MS.gene068391:intron 35.0%
ACATAACATTGGAAAGCAAG+AGG - chr4.2:83844464-83844483 MS.gene068391:CDS 35.0%
ACTTTCCTTGCAATACCATT+AGG - chr4.2:83847051-83847070 MS.gene068391:CDS 35.0%
AGAAAAACAGAGGAAACAGA+GGG - chr4.2:83845518-83845537 MS.gene068391:intron 35.0%
AGGTTAAGATGTATTTGAGG+AGG + chr4.2:83846834-83846853 None:intergenic 35.0%
AGTAACAGAATGTAGTAGGA+GGG - chr4.2:83845902-83845921 MS.gene068391:intron 35.0%
ATAGAGTTCAACAGGACTTA+AGG + chr4.2:83846088-83846107 None:intergenic 35.0%
ATCTGTTACATCAAAAGGAC+AGG + chr4.2:83846805-83846824 None:intergenic 35.0%
ATTGGTTAACATGTTAGTCC+AGG - chr4.2:83845670-83845689 MS.gene068391:intron 35.0%
CAAACTAACATGACATCATG+GGG + chr4.2:83845027-83845046 None:intergenic 35.0%
CAAATCCTTAGGCTGTTTAT+TGG + chr4.2:83844274-83844293 None:intergenic 35.0%
CAATAAACAGCCTAAGGATT+TGG - chr4.2:83844272-83844291 MS.gene068391:CDS 35.0%
CAATTGTTGCCGCAATATAA+AGG + chr4.2:83845209-83845228 None:intergenic 35.0%
CAGAATCTTGATTGTACTTG+TGG - chr4.2:83844240-83844259 MS.gene068391:CDS 35.0%
CCTAGAGTCAAAATCATTGA+GGG - chr4.2:83844974-83844993 MS.gene068391:intron 35.0%
CTTCATTTCCAGATCATCAA+GGG + chr4.2:83847550-83847569 None:intergenic 35.0%
CTTTCCTTGCAATACCATTA+GGG - chr4.2:83847052-83847071 MS.gene068391:CDS 35.0%
GAAATGAAGGTGATAAGCAT+TGG - chr4.2:83847561-83847580 MS.gene068391:CDS 35.0%
GAACCTCAAAGGGAATTAAT+TGG - chr4.2:83846110-83846129 MS.gene068391:intron 35.0%
GAATAGAAAGGAAAGTAAGG+AGG - chr4.2:83845853-83845872 MS.gene068391:intron 35.0%
GAGAGGTTAAGATGTATTTG+AGG + chr4.2:83846837-83846856 None:intergenic 35.0%
GGGATTCAATAGCATTTGTT+TGG + chr4.2:83844112-83844131 None:intergenic 35.0%
GTGTCAACAATTCATGTGTT+GGG + chr4.2:83844654-83844673 None:intergenic 35.0%
GTTTGCATTTGGCATAGTAT+CGG - chr4.2:83845782-83845801 MS.gene068391:intron 35.0%
TAGAGTTCAACAGGACTTAA+GGG + chr4.2:83846087-83846106 None:intergenic 35.0%
TAGTGTTCAGCGACTATAAT+GGG - chr4.2:83847292-83847311 MS.gene068391:CDS 35.0%
TCATAGATAACTAACACCTG+TGG + chr4.2:83845706-83845725 None:intergenic 35.0%
TCCTAGAGTCAAAATCATTG+AGG - chr4.2:83844973-83844992 MS.gene068391:intron 35.0%
TCCTCAAACAAGTCAAAAGA+AGG - chr4.2:83847414-83847433 MS.gene068391:CDS 35.0%
TCGATAGAGTTGAGAGAAAT+TGG - chr4.2:83845412-83845431 MS.gene068391:intron 35.0%
TCTGTTACATCAAAAGGACA+GGG + chr4.2:83846804-83846823 None:intergenic 35.0%
TGTAGTCTAGCTGTTAATGT+TGG - chr4.2:83846765-83846784 MS.gene068391:intron 35.0%
TGTGGAGCATGAATAATCTA+AGG + chr4.2:83846220-83846239 None:intergenic 35.0%
TTCATTTCCAGATCATCAAG+GGG + chr4.2:83847549-83847568 None:intergenic 35.0%
TTGCAAAAGCGACGTAAAAA+TGG - chr4.2:83846948-83846967 MS.gene068391:CDS 35.0%
TTGGTTAACATGTTAGTCCA+GGG - chr4.2:83845671-83845690 MS.gene068391:intron 35.0%
TTGTTGATCATCGTTGTTTG+TGG + chr4.2:83843992-83844011 None:intergenic 35.0%
! AGTAAGAACTGAGAGAGTTT+TGG - chr4.2:83845948-83845967 MS.gene068391:intron 35.0%
! CAGTGATTCACATGGATTTT+TGG + chr4.2:83844133-83844152 None:intergenic 35.0%
! GGCTAGTTCTTAAAGTTATG+AGG - chr4.2:83846304-83846323 MS.gene068391:intron 35.0%
! GGGGTTTTTGTTAAGGAAAA+TGG - chr4.2:83844327-83844346 MS.gene068391:CDS 35.0%
! GTAAGAACTGAGAGAGTTTT+GGG - chr4.2:83845949-83845968 MS.gene068391:intron 35.0%
! TAAGAACTGAGAGAGTTTTG+GGG - chr4.2:83845950-83845969 MS.gene068391:intron 35.0%
! TCTGTTGTAAAGCTTTTGGA+TGG - chr4.2:83847075-83847094 MS.gene068391:CDS 35.0%
! TTGCCGCAATATAAAGGTTT+TGG + chr4.2:83845203-83845222 None:intergenic 35.0%
! TTGGATGGTAACTCTTTTGT+TGG - chr4.2:83847090-83847109 MS.gene068391:CDS 35.0%
! TTTTATTAGGAACAACCCTC+TGG + chr4.2:83846030-83846049 None:intergenic 35.0%
!! ATCGTTTTTGACTCTTCTTG+TGG + chr4.2:83843844-83843863 None:intergenic 35.0%
!! ATTGGTGGTCATTTTAGTCT+AGG - chr4.2:83845263-83845282 MS.gene068391:intron 35.0%
!! GATGGATTATGGTTTGCATT+TGG - chr4.2:83845771-83845790 MS.gene068391:intron 35.0%
!! TTGGTGGTCATTTTAGTCTA+GGG - chr4.2:83845264-83845283 MS.gene068391:intron 35.0%
!! TTTGACTTGTTTGAGGATCT+TGG + chr4.2:83847411-83847430 None:intergenic 35.0%
!!! ACCTTCTTTTGACTTGTTTG+AGG + chr4.2:83847418-83847437 None:intergenic 35.0%
!!! ATTTTTACGTCGCTTTTGCA+AGG + chr4.2:83846949-83846968 None:intergenic 35.0%
!!! TGCCTATAACGATTTGGTTT+TGG - chr4.2:83844882-83844901 MS.gene068391:intron 35.0%
AAGTAAGGAGGGAAATAGAG+TGG - chr4.2:83845865-83845884 MS.gene068391:intron 40.0%
ACACAGTTCGTAAGTAGGAT+AGG - chr4.2:83845382-83845401 MS.gene068391:intron 40.0%
ACATTGCAAAATAACCCCCA+GGG + chr4.2:83844748-83844767 None:intergenic 40.0%
ACCAATGTCACTATCACTAG+TGG - chr4.2:83844588-83844607 MS.gene068391:intron 40.0%
ACGCTGTTATTCTTACCGTT+TGG - chr4.2:83846665-83846684 MS.gene068391:intron 40.0%
ACTGCTGATGCAAATTGGTT+TGG + chr4.2:83846916-83846935 None:intergenic 40.0%
AGAGTTCAACAGGACTTAAG+GGG + chr4.2:83846086-83846105 None:intergenic 40.0%
AGCTTTACAACAGACCCTAA+TGG + chr4.2:83847069-83847088 None:intergenic 40.0%
AGGGGAATGAGGTTCAAAAT+GGG - chr4.2:83844307-83844326 MS.gene068391:CDS 40.0%
AGTTCGTAAGTAGGATAGGT+AGG - chr4.2:83845386-83845405 MS.gene068391:intron 40.0%
ATCCTTAGGCTGTTTATTGG+TGG + chr4.2:83844271-83844290 None:intergenic 40.0%
ATGTAGTAGGAGGGAATAAG+GGG - chr4.2:83845911-83845930 MS.gene068391:intron 40.0%
CAATGTCACTATCACTAGTG+GGG - chr4.2:83844590-83844609 MS.gene068391:intron 40.0%
CACCCAATTAATTCCCTTTG+AGG + chr4.2:83846116-83846135 None:intergenic 40.0%
CATCGTTGTTTGTGGTTAAG+AGG + chr4.2:83843984-83844003 None:intergenic 40.0%
CCAATGTCACTATCACTAGT+GGG - chr4.2:83844589-83844608 MS.gene068391:intron 40.0%
CCTAAGGATTTGGATTCTGA+GGG - chr4.2:83844282-83844301 MS.gene068391:CDS 40.0%
CCTTCATTTCCAGATCATCA+AGG + chr4.2:83847551-83847570 None:intergenic 40.0%
CTAGTGTTCAGCGACTATAA+TGG - chr4.2:83847291-83847310 MS.gene068391:CDS 40.0%
GAACACACTGTAAACACCTT+TGG - chr4.2:83844904-83844923 MS.gene068391:intron 40.0%
GAACTCTATCAGAACCTCAA+AGG - chr4.2:83846099-83846118 MS.gene068391:intron 40.0%
GAATGTAGTAGGAGGGAATA+AGG - chr4.2:83845909-83845928 MS.gene068391:intron 40.0%
GAATTGCAACAGGAATGTGA+TGG + chr4.2:83846064-83846083 None:intergenic 40.0%
GAGAAAAACAGAGGAAACAG+AGG - chr4.2:83845517-83845536 MS.gene068391:intron 40.0%
GAGGAACGAAGCATAAAAAG+AGG - chr4.2:83845457-83845476 MS.gene068391:intron 40.0%
GAGGAAGTCACACATAACAT+TGG - chr4.2:83844453-83844472 MS.gene068391:CDS 40.0%
GAGTAACAGAATGTAGTAGG+AGG - chr4.2:83845901-83845920 MS.gene068391:intron 40.0%
GGCAAAAAACAGAGGGAAAA+TGG - chr4.2:83845546-83845565 MS.gene068391:intron 40.0%
GGTGTCAACAATTCATGTGT+TGG + chr4.2:83844655-83844674 None:intergenic 40.0%
GTACAATTGGGATCTCATGA+AGG + chr4.2:83846198-83846217 None:intergenic 40.0%
GTACACCAGGATACTTTATG+TGG + chr4.2:83846238-83846257 None:intergenic 40.0%
GTAGAAGATAAGATAGAGGG+AGG - chr4.2:83847327-83847346 MS.gene068391:CDS 40.0%
GTGCTAACATCAATGTAGTC+AGG - chr4.2:83845302-83845321 MS.gene068391:intron 40.0%
GTGTGCACCAATATAACAGA+TGG - chr4.2:83845753-83845772 MS.gene068391:intron 40.0%
GTTGTACATCAGGAATGTTG+AGG + chr4.2:83847233-83847252 None:intergenic 40.0%
TAATTCCATCAACCGTTCCA+CGG + chr4.2:83844409-83844428 None:intergenic 40.0%
TCATTTCCAGATCATCAAGG+GGG + chr4.2:83847548-83847567 None:intergenic 40.0%
TCCTTAGGCTGTTTATTGGT+GGG + chr4.2:83844270-83844289 None:intergenic 40.0%
TCTGTTCCTATAGTTCCAGA+GGG - chr4.2:83846012-83846031 MS.gene068391:intron 40.0%
TTCATGCACAGTGATTCACA+TGG + chr4.2:83844141-83844160 None:intergenic 40.0%
! AGAGGTTTTTGATGCTTCCA+AGG + chr4.2:83844038-83844057 None:intergenic 40.0%
! AGGGTCTGTTGTAAAGCTTT+TGG - chr4.2:83847071-83847090 MS.gene068391:CDS 40.0%
! AGGTTCTGATAGAGTTCAAC+AGG + chr4.2:83846096-83846115 None:intergenic 40.0%
! ATGCTCCACATAAAGTATCC+TGG - chr4.2:83846230-83846249 MS.gene068391:intron 40.0%
! CCATAATAACAAGTAGTGGG+TGG + chr4.2:83847255-83847274 None:intergenic 40.0%
! CCTTGATGATCTGGAAATGA+AGG - chr4.2:83847548-83847567 MS.gene068391:CDS 40.0%
! GTTTTGCCCAGACTTCAATT+GGG + chr4.2:83844617-83844636 None:intergenic 40.0%
! TAGCATTTTCTCTTTCGCCA+GGG + chr4.2:83846593-83846612 None:intergenic 40.0%
! TTAGCATTTTCTCTTTCGCC+AGG + chr4.2:83846594-83846613 None:intergenic 40.0%
!! AAGTCAAAAGAAGGTGCTGT+GGG - chr4.2:83847423-83847442 MS.gene068391:CDS 40.0%
!! CCACCCACTACTTGTTATTA+TGG - chr4.2:83847252-83847271 MS.gene068391:CDS 40.0%
!! GGAAAATGGGTCGTTGTTTT+TGG - chr4.2:83844341-83844360 MS.gene068391:CDS 40.0%
!! GTGTTGGGTTAGTTCATACA+GGG + chr4.2:83844639-83844658 None:intergenic 40.0%
!! TCTAGGGTTGGTTAAAACTC+AGG - chr4.2:83845280-83845299 MS.gene068391:intron 40.0%
!! TGGAACGGTTGATGGAATTA+GGG - chr4.2:83844409-83844428 MS.gene068391:CDS 40.0%
!! TGGTCATTTTAGTCTAGGGT+TGG - chr4.2:83845268-83845287 MS.gene068391:intron 40.0%
!! TGTGTTGGGTTAGTTCATAC+AGG + chr4.2:83844640-83844659 None:intergenic 40.0%
!!! CCCTCAATGATTTTGACTCT+AGG + chr4.2:83844977-83844996 None:intergenic 40.0%
AAAGGCCAAAGTTCAAACCC+TGG - chr4.2:83846573-83846592 MS.gene068391:intron 45.0%
ACCACTCTTCAGAGTAGTGT+TGG - chr4.2:83846503-83846522 MS.gene068391:intron 45.0%
ACCCACCAATAAACAGCCTA+AGG - chr4.2:83844266-83844285 MS.gene068391:CDS 45.0%
ACGGAGGTCATCAAAGAACA+AGG + chr4.2:83844390-83844409 None:intergenic 45.0%
ACTGTGCTTCGACTTTACTC+TGG + chr4.2:83845593-83845612 None:intergenic 45.0%
ATCGAGATCCTACGTAGGAT+CGG - chr4.2:83845325-83845344 MS.gene068391:intron 45.0%
ATTTGTCAGAGGCTCATGAG+AGG + chr4.2:83846854-83846873 None:intergenic 45.0%
CACATTGCAAAATAACCCCC+AGG + chr4.2:83844749-83844768 None:intergenic 45.0%
CAGACCCTAATGGTATTGCA+AGG + chr4.2:83847059-83847078 None:intergenic 45.0%
CAGGGGAATGAGGTTCAAAA+TGG - chr4.2:83844306-83844325 MS.gene068391:CDS 45.0%
CATTGCAAAATAACCCCCAG+GGG + chr4.2:83844747-83844766 None:intergenic 45.0%
CCACTCTTCAGAGTAGTGTT+GGG - chr4.2:83846504-83846523 MS.gene068391:intron 45.0%
CCCTCAGAATCCAAATCCTT+AGG + chr4.2:83844285-83844304 None:intergenic 45.0%
CCGGTGAAAAACGTAAACAC+GGG - chr4.2:83845352-83845371 MS.gene068391:intron 45.0%
CGGTGAAAAACGTAAACACG+GGG - chr4.2:83845353-83845372 MS.gene068391:intron 45.0%
CTCTGACTGCTGATGCAAAT+TGG + chr4.2:83846921-83846940 None:intergenic 45.0%
CTCTGTTCCTATAGTTCCAG+AGG - chr4.2:83846011-83846030 MS.gene068391:intron 45.0%
GACAACCAAACTGTGGTGAT+AGG + chr4.2:83847200-83847219 None:intergenic 45.0%
GACTTAAGGGGAATTGCAAC+AGG + chr4.2:83846074-83846093 None:intergenic 45.0%
GCCGGTGAAAAACGTAAACA+CGG - chr4.2:83845351-83845370 MS.gene068391:intron 45.0%
GCCTAAGGATTTGGATTCTG+AGG - chr4.2:83844281-83844300 MS.gene068391:CDS 45.0%
GCTTCGACTTTACTCTGGTT+AGG + chr4.2:83845588-83845607 None:intergenic 45.0%
GGAAGACGGCAAAAAACAGA+GGG - chr4.2:83845539-83845558 MS.gene068391:intron 45.0%
GGGGAATGAGGTTCAAAATG+GGG - chr4.2:83844308-83844327 MS.gene068391:CDS 45.0%
GGGTTGTTCCAAACATCGTT+TGG + chr4.2:83844084-83844103 None:intergenic 45.0%
GGTTAAGAGGCGAATGATTG+TGG + chr4.2:83843971-83843990 None:intergenic 45.0%
GTAAAGTCGAAGCACAGTTG+AGG - chr4.2:83845595-83845614 MS.gene068391:intron 45.0%
GTACAAGACTGTTGAGACCT+TGG - chr4.2:83847128-83847147 MS.gene068391:CDS 45.0%
GTCTCAGGTTCGAATATCTG+AGG + chr4.2:83844676-83844695 None:intergenic 45.0%
TCAGCATCGTCATCATTCCT+TGG - chr4.2:83844018-83844037 MS.gene068391:CDS 45.0%
TGTGTTGGACAACCAAACTG+TGG + chr4.2:83847207-83847226 None:intergenic 45.0%
TTGCATCAGCAGTCAGAGTA+AGG - chr4.2:83846923-83846942 MS.gene068391:intron 45.0%
TTGTGGCAAGAGGAAGAGAA+AGG + chr4.2:83843954-83843973 None:intergenic 45.0%
TTTCGCCAGGGTTTGAACTT+TGG + chr4.2:83846581-83846600 None:intergenic 45.0%
! AACACTACTCTGAAGAGTGG+TGG + chr4.2:83846504-83846523 None:intergenic 45.0%
! AAGGAATGATGACGATGCTG+AGG + chr4.2:83844019-83844038 None:intergenic 45.0%
! ATTTGGATTCTGAGGGTCAG+GGG - chr4.2:83844289-83844308 MS.gene068391:CDS 45.0%
! CCAAACATCGTTTGGAGTGA+GGG + chr4.2:83844076-83844095 None:intergenic 45.0%
! CCCACTAGTGATAGTGACAT+TGG + chr4.2:83844592-83844611 None:intergenic 45.0%
! CCCGTGTTTACGTTTTTCAC+CGG + chr4.2:83845355-83845374 None:intergenic 45.0%
! GATTTGGATTCTGAGGGTCA+GGG - chr4.2:83844288-83844307 MS.gene068391:CDS 45.0%
! GGTTTTGCCCAGACTTCAAT+TGG + chr4.2:83844618-83844637 None:intergenic 45.0%
! GTTTGGAGTGAGGGTTTGTA+CGG + chr4.2:83844067-83844086 None:intergenic 45.0%
! TAGTCGCTGAACACTAGCTT+TGG + chr4.2:83847288-83847307 None:intergenic 45.0%
! TCCAAACATCGTTTGGAGTG+AGG + chr4.2:83844077-83844096 None:intergenic 45.0%
! TGATAGTGACATTGGTCCAC+CGG + chr4.2:83844584-83844603 None:intergenic 45.0%
! TTGTTCTTTGATGACCTCCG+TGG - chr4.2:83844389-83844408 MS.gene068391:CDS 45.0%
!! CAAGTCAAAAGAAGGTGCTG+TGG - chr4.2:83847422-83847441 MS.gene068391:CDS 45.0%
!! GAACAACCCTCTGGAACTAT+AGG + chr4.2:83846021-83846040 None:intergenic 45.0%
!! GCTGATGCAAATTGGTTTGG+TGG + chr4.2:83846913-83846932 None:intergenic 45.0%
!! GTGGAACGGTTGATGGAATT+AGG - chr4.2:83844408-83844427 MS.gene068391:CDS 45.0%
ACCTGTGGTCTAACTAACCC+TGG + chr4.2:83845691-83845710 None:intergenic 50.0%
AGATCCTACGTAGGATCGGT+CGG - chr4.2:83845329-83845348 MS.gene068391:intron 50.0%
AGGCGAATGATTGTGGCAAG+AGG + chr4.2:83843964-83843983 None:intergenic 50.0%
CAGAGGAAACAGAGGGAAGA+CGG - chr4.2:83845525-83845544 MS.gene068391:intron 50.0%
CCCTCACTCCAAACGATGTT+TGG - chr4.2:83844073-83844092 MS.gene068391:CDS 50.0%
CGGCGTAAGACCAACTAATC+CGG - chr4.2:83844562-83844581 MS.gene068391:CDS 50.0%
CGTAAGACCAACTAATCCGG+TGG - chr4.2:83844565-83844584 MS.gene068391:CDS 50.0%
CTTGGACTCTTCCTTGTGCA+CGG - chr4.2:83847146-83847165 MS.gene068391:CDS 50.0%
GGAATGTTGAGGAGCTGTGT+TGG + chr4.2:83847222-83847241 None:intergenic 50.0%
GGACTCGATCTTCGCTACAT+TGG - chr4.2:83845652-83845671 MS.gene068391:intron 50.0%
GGGAAGACGGCAAAAAACAG+AGG - chr4.2:83845538-83845557 MS.gene068391:intron 50.0%
GGGTTTGTACGGTTTCGTAG+AGG + chr4.2:83844056-83844075 None:intergenic 50.0%
TCAGGATCGAGATCCTACGT+AGG - chr4.2:83845320-83845339 MS.gene068391:intron 50.0%
TCTTGGATCCAGTGCAGTCA+AGG + chr4.2:83847394-83847413 None:intergenic 50.0%
TGGGGACCCAATTGAAGTCT+GGG - chr4.2:83844608-83844627 MS.gene068391:intron 50.0%
TTCGAACCTGAGACCTAGAC+AGG - chr4.2:83844682-83844701 MS.gene068391:intron 50.0%
TTTCCAGATCATCAAGGGGG+AGG + chr4.2:83847545-83847564 None:intergenic 50.0%
! CCCAACACTACTCTGAAGAG+TGG + chr4.2:83846507-83846526 None:intergenic 50.0%
! CTTTGATGACCTCCGTGGAA+CGG - chr4.2:83844394-83844413 MS.gene068391:CDS 50.0%
! GGATTTGGATTCTGAGGGTC+AGG - chr4.2:83844287-83844306 MS.gene068391:CDS 50.0%
!! CATTGGTCCACCGGATTAGT+TGG + chr4.2:83844575-83844594 None:intergenic 50.0%
!! GAAGCACAGTTGAGGTGTTG+TGG - chr4.2:83845603-83845622 MS.gene068391:intron 50.0%
!! GACGTGAGCTTGCTAGTGAA+AGG - chr4.2:83846714-83846733 MS.gene068391:intron 50.0%
!! GTAGTGGGTGGTTGTACATC+AGG + chr4.2:83847243-83847262 None:intergenic 50.0%
!! TCCAGGGTTAGTTAGACCAC+AGG - chr4.2:83845687-83845706 MS.gene068391:intron 50.0%
AAGATCGAGTCCCAGCTCGT+AGG + chr4.2:83845644-83845663 None:intergenic 55.0%
ACCAAGAGCCTTGACTGCAC+TGG - chr4.2:83847383-83847402 MS.gene068391:CDS 55.0%
CCAAACTGTGGTGATAGGCC+AGG + chr4.2:83847195-83847214 None:intergenic 55.0%
CCTGGCCTATCACCACAGTT+TGG - chr4.2:83847192-83847211 MS.gene068391:CDS 55.0%
CGTGCACAAGGAAGAGTCCA+AGG + chr4.2:83847148-83847167 None:intergenic 55.0%
CTTGTGCGATCCTACGAGCT+GGG - chr4.2:83845631-83845650 MS.gene068391:intron 55.0%
GCAAAATAACCCCCAGGGGT+TGG + chr4.2:83844743-83844762 None:intergenic 55.0%
GTGGGGACCCAATTGAAGTC+TGG - chr4.2:83844607-83844626 MS.gene068391:intron 55.0%
GTGGTTAAGGCCTGGGTACT+AGG + chr4.2:83844716-83844735 None:intergenic 55.0%
TCCAGTGCAGTCAAGGCTCT+TGG + chr4.2:83847387-83847406 None:intergenic 55.0%
TCTTGTGCGATCCTACGAGC+TGG - chr4.2:83845630-83845649 MS.gene068391:intron 55.0%
TGCGGCAACAATTGCAGCTG+CGG - chr4.2:83845215-83845234 MS.gene068391:intron 55.0%
TTCCATCAACCGTTCCACGG+AGG + chr4.2:83844406-83844425 None:intergenic 55.0%
! AAGCCTCCCCCTTGATGATC+TGG - chr4.2:83847539-83847558 MS.gene068391:CDS 55.0%
! TTCTGAGGGTCAGGGGAATG+AGG - chr4.2:83844296-83844315 MS.gene068391:CDS 55.0%
!! CGCTCGGTGTTACTCAATCC+TGG - chr4.2:83847174-83847193 MS.gene068391:CDS 55.0%
GACCTCCGTGGAACGGTTGA+TGG - chr4.2:83844401-83844420 MS.gene068391:CDS 60.0%
GTACCCAGGCCTTAACCACC+AGG - chr4.2:83844717-83844736 MS.gene068391:intron 60.0%
TAACCACCAGGCCAACCCCT+GGG - chr4.2:83844729-83844748 MS.gene068391:intron 60.0%
TGCGCACCTGTCTAGGTCTC+AGG + chr4.2:83844691-83844710 None:intergenic 60.0%
TGGCCTGGTGGTTAAGGCCT+GGG + chr4.2:83844723-83844742 None:intergenic 60.0%
TTAACCACCAGGCCAACCCC+TGG - chr4.2:83844728-83844747 MS.gene068391:intron 60.0%
TTGGCCTGGTGGTTAAGGCC+TGG + chr4.2:83844724-83844743 None:intergenic 60.0%
! CTAGGAGTGCGCACCTGTCT+AGG + chr4.2:83844698-83844717 None:intergenic 60.0%
!! AGGGGTTGGCCTGGTGGTTA+AGG + chr4.2:83844729-83844748 None:intergenic 60.0%
AACCACCAGGCCAACCCCTG+GGG - chr4.2:83844730-83844749 MS.gene068391:intron 65.0%
CCTACGTAGGATCGGTCGGC+CGG - chr4.2:83845333-83845352 MS.gene068391:intron 65.0%
CTTGTGCACGGACTCGCGCT+CGG - chr4.2:83847158-83847177 MS.gene068391:CDS 65.0%
GGTGCGCACTCCTAGTACCC+AGG - chr4.2:83844703-83844722 MS.gene068391:intron 65.0%
!! ATAACCCCCAGGGGTTGGCC+TGG + chr4.2:83844738-83844757 None:intergenic 65.0%
ACCACCAGGCCAACCCCTGG+GGG - chr4.2:83844731-83844750 MS.gene068391:intron 70.0%
CCGGCCGACCGATCCTACGT+AGG + chr4.2:83845336-83845355 None:intergenic 70.0%
CGAGCGCGAGTCCGTGCACA+AGG + chr4.2:83847160-83847179 None:intergenic 70.0%
!! ACCCCCAGGGGTTGGCCTGG+TGG + chr4.2:83844735-83844754 None:intergenic 75.0%


Chromosome Type Strat End Strand Name
chr4.2 gene 83843826 83847593 83843826 ID=MS.gene068391
chr4.2 mRNA 83843826 83847593 83843826 ID=MS.gene068391.t1;Parent=MS.gene068391
chr4.2 exon 83846934 83847593 83846934 ID=MS.gene068391.t1.exon1;Parent=MS.gene068391.t1
chr4.2 CDS 83846934 83847593 83846934 ID=cds.MS.gene068391.t1;Parent=MS.gene068391.t1
chr4.2 exon 83843826 83844596 83843826 ID=MS.gene068391.t1.exon2;Parent=MS.gene068391.t1
chr4.2 CDS 83843826 83844596 83843826 ID=cds.MS.gene068391.t1;Parent=MS.gene068391.t1
Gene Sequence

>MS.gene068391

ATGGCTTCTTCGCAACCACAAGAAGAGTCAAAAACGATTCCACTGAAAATTTTAATAGACAGAGAAAACAACAAAGTTGTCGCTGTAGAAGCAACAAAAGACTTCATCGACACTCTCTTCAGCTTCCTTTCTCTTCCTCTTGCCACAATCATTCGCCTCTTAACCACAAACAACGATGATCAACAACAATCCTCAGCATCGTCATCATTCCTTGGAAGCATCAAAAACCTCTACGAAACCGTACAAACCCTCACTCCAAACGATGTTTGGAACAACCCTTTCTCCAAACAAATGCTATTGAATCCCAAAAATCCATGTGAATCACTGTGCATGAACCTGTTCATGAATATTGATGACACTGAATCATCAAGTAAGTTTTTTGTGTGTGATTCTTGTTACAAGTTTACGACTTTTCAGAATCTTGATTGTACTTGTGGAAAACCCACCAATAAACAGCCTAAGGATTTGGATTCTGAGGGTCAGGGGAATGAGGTTCAAAATGGGGTTTTTGTTAAGGAAAATGGGTCGTTGTTTTTGGTGTTTGATGATTTGAAGATTGTGCCTTGTTCTTTGATGACCTCCGTGGAACGGTTGATGGAATTAGGGTATTCAGATTTGAGTAAGTTAGAGGAAGTCACACATAACATTGGAAAGCAAGAGGTAATTGTATTGTGTTTTGTGTTGTAAACTTAATTTTGCAATGTGTATTTTGTTTTATTTTTGGAAACTCGGTATTCGGCGTAAGACCAACTAATCCGGTGGACCAATGTCACTATCACTAGTGGGGACCCAATTGAAGTCTGGGCAAAACCCTGTATGAACTAACCCAACACATGAATTGTTGACACCTCAGATATTCGAACCTGAGACCTAGACAGGTGCGCACTCCTAGTACCCAGGCCTTAACCACCAGGCCAACCCCTGGGGGTTATTTTGCAATGTGTTTTTCTATTTTAGAGTAGTGGTGAATATGCCTTACAAATCTGTGTTTTTTTAGCTTTTGGCATTGATGATTCAAATGACCTTATAGCATCATTTGAATTACGATATTGAAAATGCCTATAACGATTTGGTTTTGGAACACACTGTAAACACCTTTGGGTAATTATGAATCATTAGGGAAAAGATTCAAGATTTCTCTATTGAATCCTAGAGTCAAAATCATTGAGGGTTGAGAGAAAAAATAGAAATTAGGGAACCCCATGATGTCATGTTAGTTTGTAGAGTAAGAAAAATTTGAAAGAAAGTTTTTGAAATGAAATTTTCAGTCATGATTCTAAATTGCAGTTGTGGTTACAATGTGAACCTTGTTATTGCATTAAAATGCGGGTAAATGTTGCCGAAATTGCAGTTGTAATGTTGTTGCAGAGACATCCAAAACCTTTATATTGCGGCAACAATTGCAGCTGCGGAGCGCAATTTAGAATTGTGTTGTTAATTGGTGGTCATTTTAGTCTAGGGTTGGTTAAAACTCAGGTGCTAACATCAATGTAGTCAGGATCGAGATCCTACGTAGGATCGGTCGGCCGGTGAAAAACGTAAACACGGGGAACATAACACAGTTCGTAAGTAGGATAGGTAGGATGTCGATAGAGTTGAGAGAAATTGGTAGAAAAAATAGAGGGAAAACAGAGGAACGAAGCATAAAAAGAGGTAATAAAGGAAAAACAGAGGAACCAAGCAACAAAATAGAGAAAAACAGAGGAAACAGAGGGAAGACGGCAAAAAACAGAGGGAAAATGGCAAAAACAGAGCAAAACCTAACCAGAGTAAAGTCGAAGCACAGTTGAGGTGTTGTGGCACGTCTTGTGCGATCCTACGAGCTGGGACTCGATCTTCGCTACATTGGTTAACATGTTAGTCCAGGGTTAGTTAGACCACAGGTGTTAGTTATCTATGAGTATCAAAATGCTACTTAAACGGTAATGTGTGCACCAATATAACAGATGGATTATGGTTTGCATTTGGCATAGTATCGGTTAAGAACCTGATAAGAGAGCATTCATTAAGAAGGTCCATGTGATAAAGAATAGAAAGGAAAGTAAGGAGGGAAATAGAGTGGTTATAAACTGACAGAGTAACAGAATGTAGTAGGAGGGAATAAGGGGCTGTTGCAGAAGCAAGTAAGAACTGAGAGAGTTTTGGGGCACTTTTGAATTAGCCTAGAGTTTATCACTTTCTTTTGCTCTGTTCCTATAGTTCCAGAGGGTTGTTCCTAATAAAATTCTTCTTTTTCCATCACATTCCTGTTGCAATTCCCCTTAAGTCCTGTTGAACTCTATCAGAACCTCAAAGGGAATTAATTGGGTGAAAGAGATGATAATTTTTACTGATTGGATGAAATTGAACAAAACCAAATAGAAATTTCTCCTTCATGAGATCCCAATTGTACCTTAGATTATTCATGCTCCACATAAAGTATCCTGGTGTACCATAAATTTAAAGGGTAAACGTTATTTAAAAAACATTCACAATTTGGGCTAGTTCTTAAAGTTATGAGGCTAGTTGTTATACTTAGTTATGTACACACTATAACTCTCAAGTTAGAAATTGTTAATAATTTTGTCCTTTGAATGTTACTTACAAGTTATATTGGTGTTACTGCTACACGATCAAGTACATCATGCTGAAATCTAATTTTCGCTGTGTCTAAGAGCTTCAGAAACATGTTTTCTCCACCACTCTTCAGAGTAGTGTTGGGTAGCTCAACTAGTTTGAGTTAAGAGTTAAAGTTAGTAAATGAGTTAAAAGGCCAAAGTTCAAACCCTGGCGAAAGAGAAAATGCTAACATGACTATTAATGTACAAGCATTTGTATATGTATATAAAAAAAAACACGCACGCTGTTATTCTTACCGTTTGGTTTAATATCTTGCATTTCTGTTATGTGACGTGAGCTTGCTAGTGAAAGGTATTTTAAATAGGTTATATTGGTATCACTGTAGTCTAGCTGTTAATGTTGGCTAAATAAATGTTCCCTGTCCTTTTGATGTAACAGATACTGAACCTCCTCAAATACATCTTAACCTCTCATGAGCCTCTGACAAATACAATTTTGAAAAGTAGCTCAAAGAACAAAGAAAATCCACCAAACCAATTTGCATCAGCAGTCAGAGTAAGGCCTTGCAAAAGCGACGTAAAAATGGATGTTAAGCTTGCACGAAGTAAATCTCAGAAAAAAATAATATTCGCAGAAGCGAGTGAAAACTTTGTTGATTTCATTTTTACTTTCCTTGCAATACCATTAGGGTCTGTTGTAAAGCTTTTGGATGGTAACTCTTTTGTTGGATGTGTTGATAACTTGTACAAGACTGTTGAGACCTTGGACTCTTCCTTGTGCACGGACTCGCGCTCGGTGTTACTCAATCCTGGCCTATCACCACAGTTTGGTTGTCCAACACAGCTCCTCAACATTCCTGATGTACAACCACCCACTACTTGTTATTATGGTACAGGGACGCCAAAGCTAGTGTTCAGCGACTATAATGGGAGTCATCAAATCGTAGAAGATAAGATAGAGGGAGGAGTGATTTCTAAGAAAAAGGTATCAATTTATAAACCAAGAGCCTTGACTGCACTGGATCCAAGATCCTCAAACAAGTCAAAAGAAGGTGCTGTGGGATTTGTGAAGAAAGCAACATTATATGCTATTGGAGATGATCTAAAAGTAAAACCACTTTCTGATAATTCTTGCATTTCATATTTGAAAGAATTAAGCCTCCCCCTTGATGATCTGGAAATGAAGGTGATAAGCATTGGTGAAGCTGAG
Protein sequence

>MS.gene068391.t1

MASSQPQEESKTIPLKILIDRENNKVVAVEATKDFIDTLFSFLSLPLATIIRLLTTNNDDQQQSSASSSFLGSIKNLYETVQTLTPNDVWNNPFSKQMLLNPKNPCESLCMNLFMNIDDTESSSKFFVCDSCYKFTTFQNLDCTCGKPTNKQPKDLDSEGQGNEVQNGVFVKENGSLFLVFDDLKIVPCSLMTSVERLMELGYSDLSKLEEVTHNIGKQEILNLLKYILTSHEPLTNTILKSSSKNKENPPNQFASAVRVRPCKSDVKMDVKLARSKSQKKIIFAEASENFVDFIFTFLAIPLGSVVKLLDGNSFVGCVDNLYKTVETLDSSLCTDSRSVLLNPGLSPQFGCPTQLLNIPDVQPPTTCYYGTGTPKLVFSDYNGSHQIVEDKIEGGVISKKKVSIYKPRALTALDPRSSNKSKEGAVGFVKKATLYAIGDDLKVKPLSDNSCISYLKELSLPLDDLEMKVISIGEAE