AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene94754

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene94754.t1 MTR_7g066310 49.086 383 120 9 10 322 6 383 1.73e-104 318
MS.gene94754.t1 MTR_7g066580 50.853 293 86 6 17 253 1 291 2.61e-81 260
MS.gene94754.t1 MTR_7g066580 56.338 71 31 0 255 325 378 448 1.27e-15 79.3
MS.gene94754.t1 MTR_7g066580 36.441 118 69 2 11 127 215 327 2.13e-12 69.3
MS.gene94754.t1 MTR_7g066260 57.490 247 51 3 127 322 219 462 1.14e-77 252
MS.gene94754.t1 MTR_7g066260 74.336 113 29 0 10 122 14 126 3.94e-51 182
MS.gene94754.t1 MTR_2g029400 49.829 293 82 7 1 253 1 268 2.97e-76 246
MS.gene94754.t1 MTR_2g029400 56.897 58 25 0 255 312 348 405 1.90e-12 69.3
MS.gene94754.t1 MTR_7g066290 60.987 223 56 4 125 322 217 433 2.37e-68 226
MS.gene94754.t1 MTR_7g066290 63.934 122 44 0 1 122 5 126 4.59e-47 169
MS.gene94754.t1 MTR_7g066340 52.697 241 66 4 127 322 216 453 4.19e-67 224
MS.gene94754.t1 MTR_7g066340 65.789 114 37 1 10 121 11 124 4.57e-43 159
MS.gene94754.t1 MTR_7g066400 46.531 245 77 4 127 318 190 433 1.64e-57 197
MS.gene94754.t1 MTR_7g066400 48.889 135 51 3 11 143 12 130 2.92e-29 120
MS.gene94754.t1 MTR_7g066360 52.778 252 68 6 127 337 215 456 8.52e-56 194
MS.gene94754.t1 MTR_7g066360 67.742 124 35 3 1 120 1 123 1.90e-45 166
MS.gene94754.t1 MTR_7g066350 50.840 238 68 6 127 318 211 445 2.08e-54 189
MS.gene94754.t1 MTR_7g066350 71.681 113 30 2 10 120 8 120 4.95e-46 167
MS.gene94754.t1 MTR_7g012680 69.600 125 35 1 1 122 1 125 3.19e-52 184
MS.gene94754.t1 MTR_7g012680 41.085 258 91 6 127 326 195 449 1.82e-38 146
MS.gene94754.t1 MTR_7g066280 34.184 392 97 9 90 322 1 390 6.79e-51 179
MS.gene94754.t1 MTR_7g058700 45.968 248 83 4 106 326 702 925 1.01e-49 183
MS.gene94754.t1 MTR_7g058700 63.366 101 22 2 23 122 531 617 5.77e-30 124
MS.gene94754.t1 MTR_1g041315 46.903 226 73 3 127 306 227 451 2.57e-48 174
MS.gene94754.t1 MTR_1g041315 62.097 124 43 2 1 120 1 124 4.73e-40 151
MS.gene94754.t1 MTR_7g063920 39.088 307 130 5 1 258 1 299 3.21e-47 170
MS.gene94754.t1 MTR_7g063920 54.167 72 33 0 255 326 363 434 4.89e-16 80.9
MS.gene94754.t1 MTR_7g066480 47.222 216 86 6 127 322 214 421 7.44e-46 166
MS.gene94754.t1 MTR_7g066480 57.658 111 46 1 10 119 15 125 7.21e-30 121
MS.gene94754.t1 MTR_7g066570 65.873 126 39 2 1 122 1 126 1.57e-45 168
MS.gene94754.t1 MTR_7g066570 57.812 128 50 2 127 253 209 333 2.35e-32 130
MS.gene94754.t1 MTR_7g066570 54.945 91 34 1 255 338 413 503 1.48e-19 92.4
MS.gene94754.t1 MTR_1g014060 69.903 103 31 0 20 122 9 111 2.20e-43 158
MS.gene94754.t1 MTR_1g014060 62.500 72 27 0 255 326 317 388 1.18e-19 91.3
MS.gene94754.t1 MTR_1g014060 55.738 61 25 1 195 253 196 256 3.31e-11 65.5
MS.gene94754.t1 MTR_1g040610 93.636 110 7 0 361 470 774 883 5.54e-43 164
MS.gene94754.t1 MTR_1g040610 93.636 110 7 0 361 470 624 733 7.68e-43 163
MS.gene94754.t1 MTR_7g058710 62.205 127 33 3 2 127 3 115 9.02e-43 159
MS.gene94754.t1 MTR_7g058710 56.693 127 52 1 127 253 206 329 6.25e-30 122
MS.gene94754.t1 MTR_7g058710 56.944 72 31 0 255 326 410 481 1.63e-17 85.5
MS.gene94754.t1 MTR_7g066490 43.541 209 104 3 127 322 200 407 1.54e-40 151
MS.gene94754.t1 MTR_7g066490 56.364 110 47 1 11 119 16 125 1.77e-28 117
MS.gene94754.t1 MTR_7g066390 63.115 122 28 2 218 322 1 122 2.56e-39 140
MS.gene94754.t1 MTR_3g007740 38.956 249 97 3 127 322 196 442 2.25e-37 143
MS.gene94754.t1 MTR_3g007740 49.107 112 44 2 9 119 7 106 5.37e-22 99.0
MS.gene94754.t1 MTR_7g066410 52.800 125 56 2 3 126 2 124 2.61e-37 144
MS.gene94754.t1 MTR_7g066410 38.816 152 81 2 127 277 233 373 3.26e-19 90.9
MS.gene94754.t1 MTR_7g066410 56.522 69 30 0 254 322 444 512 8.72e-16 80.5
MS.gene94754.t1 MTR_7g066680 60.465 129 45 3 127 253 38 162 1.75e-36 138
MS.gene94754.t1 MTR_7g066680 50.526 95 16 1 255 318 240 334 6.75e-17 82.4
MS.gene94754.t1 MTR_7g063670 37.402 254 99 3 127 326 208 455 1.65e-35 138
MS.gene94754.t1 MTR_7g063670 48.214 112 45 2 12 122 16 115 1.73e-21 97.4
MS.gene94754.t1 MTR_7g063880 49.020 153 73 3 1 148 1 153 1.08e-34 136
MS.gene94754.t1 MTR_7g063880 51.389 72 35 0 255 326 395 466 1.23e-14 76.6
MS.gene94754.t1 MTR_7g063880 38.793 116 48 3 127 238 210 306 3.94e-11 65.5
MS.gene94754.t1 MTR_7g063880 42.353 85 43 1 11 95 246 324 4.46e-11 65.5
MS.gene94754.t1 MTR_7g063830 38.397 237 101 4 127 324 210 440 4.04e-32 128
MS.gene94754.t1 MTR_7g063830 49.573 117 58 1 3 118 2 118 1.10e-29 121
MS.gene94754.t1 MTR_7g063830 36.036 111 65 2 8 117 251 356 2.37e-11 66.2
MS.gene94754.t1 MTR_7g063660 53.913 115 52 1 6 119 4 118 4.26e-32 129
MS.gene94754.t1 MTR_7g063660 42.969 128 64 2 127 253 207 326 8.28e-18 86.3
MS.gene94754.t1 MTR_7g063660 47.222 72 38 0 255 326 404 475 6.27e-14 74.3
MS.gene94754.t1 MTR_7g063660 35.043 117 70 2 2 117 241 352 1.39e-13 73.2
MS.gene94754.t1 MTR_7g062300 49.612 129 63 2 1 127 1 129 5.86e-31 125
MS.gene94754.t1 MTR_7g062300 40.945 127 67 1 127 253 214 332 1.70e-17 85.5
MS.gene94754.t1 MTR_7g062300 59.701 67 26 1 255 320 405 471 7.56e-15 77.4
MS.gene94754.t1 MTR_7g062300 44.706 85 41 2 11 94 256 335 5.99e-14 74.3
MS.gene94754.t1 MTR_7g063900 50.794 126 61 1 3 127 2 127 6.02e-31 125
MS.gene94754.t1 MTR_7g063900 45.536 112 53 2 127 238 210 313 3.19e-17 84.7
MS.gene94754.t1 MTR_7g063900 36.111 108 59 2 8 115 249 346 5.93e-12 68.2
MS.gene94754.t1 MTR_7g066430 49.558 113 56 1 11 122 4 116 7.93e-31 125
MS.gene94754.t1 MTR_7g066430 48.031 127 64 2 127 253 209 333 5.30e-25 108
MS.gene94754.t1 MTR_7g066430 61.538 65 25 0 258 322 421 485 3.73e-15 78.2
MS.gene94754.t1 MTR_7g063890 50.413 121 59 1 8 127 24 144 2.54e-30 124
MS.gene94754.t1 MTR_7g063890 46.429 112 52 1 127 238 226 329 5.77e-16 80.9
MS.gene94754.t1 MTR_7g063840 53.782 119 53 2 7 123 5 123 3.32e-30 123
MS.gene94754.t1 MTR_7g063840 41.071 112 58 1 127 238 208 311 1.36e-16 82.8
MS.gene94754.t1 MTR_7g063840 49.275 69 35 0 258 326 403 471 1.25e-11 67.0
MS.gene94754.t1 MTR_4g017470 29.355 310 150 6 1 247 1 304 2.88e-29 120
MS.gene94754.t1 MTR_7g063820 54.701 117 51 2 3 118 2 117 6.03e-29 119
MS.gene94754.t1 MTR_7g063820 41.732 127 66 1 127 253 212 330 4.27e-18 87.4
MS.gene94754.t1 MTR_7g063820 57.534 73 30 1 255 326 410 482 1.87e-14 75.9
MS.gene94754.t1 MTR_7g062280 49.587 121 60 1 3 122 2 122 3.45e-28 117
MS.gene94754.t1 MTR_7g062280 40.157 127 68 1 127 253 224 342 2.02e-17 85.5
MS.gene94754.t1 MTR_7g062280 55.556 72 32 0 255 326 418 489 4.09e-17 84.3
MS.gene94754.t1 MTR_7g062280 41.573 89 46 2 7 94 262 345 1.38e-13 73.2
MS.gene94754.t1 MTR_3g065200 33.108 296 122 9 11 253 3 275 7.89e-28 116
MS.gene94754.t1 MTR_7g063720 33.484 221 83 4 167 326 13 230 1.15e-27 111
MS.gene94754.t1 MTR_7g063720 37.209 86 48 2 11 95 23 103 1.95e-12 67.4
MS.gene94754.t1 MTR_7g062270 47.967 123 62 2 1 122 1 122 1.17e-26 112
MS.gene94754.t1 MTR_4g017410 44.628 121 55 4 12 120 10 130 5.32e-23 102
MS.gene94754.t1 MTR_4g017610 45.299 117 54 3 14 120 16 132 6.95e-23 102
MS.gene94754.t1 MTR_4g019310 44.348 115 55 2 14 119 11 125 1.05e-22 101
MS.gene94754.t1 MTR_4g019310 40.323 124 57 3 127 245 223 334 5.63e-16 80.9
MS.gene94754.t1 MTR_4g019310 47.887 71 36 1 254 323 421 491 8.40e-11 64.7
MS.gene94754.t1 MTR_4g019340 43.902 123 56 2 12 121 39 161 1.54e-21 98.2
MS.gene94754.t1 MTR_4g019340 35.772 123 76 2 127 249 256 375 1.30e-12 70.5
MS.gene94754.t1 MTR_4g017440 41.606 137 63 5 1 120 1 137 2.63e-21 97.4
MS.gene94754.t1 MTR_4g017440 36.000 125 70 3 127 247 226 344 1.78e-12 70.1
MS.gene94754.t1 MTR_7g100420 33.206 262 126 8 2 253 30 252 5.79e-21 95.5
MS.gene94754.t1 MTR_7g100420 40.351 114 57 3 210 322 294 397 2.93e-12 68.9
MS.gene94754.t1 MTR_4g017830 41.085 129 67 4 1 120 1 129 6.52e-20 93.2
MS.gene94754.t1 MTR_4g017830 36.364 121 74 2 127 247 220 337 5.35e-14 74.7
MS.gene94754.t1 MTR_2g067310 45.455 132 58 6 3 129 34 156 1.18e-18 85.9
MS.gene94754.t1 MTR_4g019330 37.584 149 74 3 191 320 32 180 6.22e-18 82.4
MS.gene94754.t1 MTR_4g019240 37.857 140 72 5 12 142 14 147 1.12e-17 81.3
MS.gene94754.t1 MTR_4g019240 31.481 162 83 5 173 322 9 154 4.06e-12 65.5
MS.gene94754.t1 MTR_7g063760 47.945 73 37 1 258 329 2 74 7.14e-16 72.8
MS.gene94754.t1 MTR_1g115440 39.216 102 57 1 1 102 1 97 2.02e-15 76.3
MS.gene94754.t1 MTR_0150s0010 40.860 93 50 1 3 95 2 89 4.62e-15 75.1
MS.gene94754.t1 MTR_7g063690 72.917 48 13 0 12 59 13 60 1.23e-14 73.9
MS.gene94754.t1 MTR_8g445860 34.959 123 67 4 1 119 7 120 1.40e-14 73.9
MS.gene94754.t1 MTR_1g115450 37.736 106 54 3 1 103 1 97 1.41e-14 71.2
MS.gene94754.t1 MTR_7g063850 46.575 73 39 0 254 326 214 286 7.15e-14 72.8
MS.gene94754.t1 MTR_1g115470 41.758 91 48 1 8 98 3 88 2.08e-13 72.8
MS.gene94754.t1 MTR_8g445920 37.363 91 52 1 3 93 2 87 8.97e-13 65.1
MS.gene94754.t1 MTR_8g044890 37.363 91 52 1 3 93 2 87 8.97e-13 65.1
MS.gene94754.t1 MTR_1g115455 38.384 99 53 2 8 103 6 99 1.72e-12 67.4
MS.gene94754.t1 MTR_4g017550 36.364 121 75 2 125 244 195 314 1.80e-12 69.7
MS.gene94754.t1 MTR_0150s0030 36.264 91 52 2 5 94 2 87 3.32e-12 66.2
MS.gene94754.t1 MTR_7g063870 54.545 55 25 0 5 59 25 79 1.77e-11 65.1
MS.gene94754.t1 MTR_8g023240 31.496 127 70 3 122 238 214 333 1.98e-11 66.6
MS.gene94754.t1 MTR_8g044880 38.636 88 48 2 8 94 5 87 2.40e-11 64.7
MS.gene94754.t1 MTR_8g445910 38.636 88 48 2 8 94 5 87 2.47e-11 64.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene94754.t1 AT3G09110 47.321 112 58 1 13 123 11 122 1.73e-26 110
MS.gene94754.t1 AT3G09140 40.650 123 71 2 5 126 4 125 4.89e-22 99.8
MS.gene94754.t1 AT3G09140 40.650 123 71 2 5 126 4 125 5.74e-22 99.8
MS.gene94754.t1 AT3G09120 42.342 111 62 2 10 119 5 114 3.70e-21 94.7
MS.gene94754.t1 AT5G43240 38.938 113 68 1 12 123 10 122 4.09e-20 94.0
MS.gene94754.t1 AT5G43240 38.938 113 68 1 12 123 10 122 4.09e-20 94.0
MS.gene94754.t1 AT5G43240 38.938 113 68 1 12 123 10 122 4.09e-20 94.0
MS.gene94754.t1 AT5G01150 42.342 111 63 1 13 122 11 121 6.95e-20 93.2
MS.gene94754.t1 AT5G01130 41.284 109 64 0 11 119 9 117 1.94e-19 91.3
MS.gene94754.t1 AT5G01120 38.938 113 68 1 12 123 10 122 3.31e-19 90.9
MS.gene94754.t1 AT5G37320 38.614 101 60 2 21 119 19 119 1.58e-14 76.3

Find 104 sgRNAs with CRISPR-Local

Find 213 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CAATTTCCTCAATGTCATTT+AGG 0.087241 7.1:-35578736 None:intergenic
CCCAGGACCAACAACGTTTA+TGG 0.207981 7.1:+35578640 MS.gene94754:intron
GTTTCTTGACATTGCCTTTA+GGG 0.212197 7.1:+35577551 MS.gene94754:CDS
GCCAAGACTAATATAGTTTC+TGG 0.214017 7.1:+35580453 MS.gene94754:CDS
AATATTGAAGCAATGAAATT+TGG 0.225545 7.1:+35577604 MS.gene94754:CDS
AGTTTCTTGACATTGCCTTT+AGG 0.278405 7.1:+35577550 MS.gene94754:CDS
AATTTCCTCAATGTCATTTA+GGG 0.286648 7.1:-35578735 None:intergenic
GAGGAAATTGTCGTTAATAT+TGG 0.297073 7.1:+35578749 MS.gene94754:CDS
AGGGACTATTTCAAGACTTC+TGG 0.297436 7.1:+35577570 MS.gene94754:CDS
AACATTTCAAGTCAAAATAA+TGG 0.325607 7.1:+35580555 MS.gene94754:CDS
TTATCCGATTCAAGAACTTT+TGG 0.361117 7.1:-35580423 None:intergenic
CTGCAGACGGTTCTGATGAT+TGG 0.366825 7.1:-35580485 None:intergenic
ATGCTAGTACTGAAAGTTGC+AGG 0.369020 7.1:-35580699 None:intergenic
TTTGTTACCACCGGTAGAAA+TGG 0.375777 7.1:-35580609 None:intergenic
GAGTGCACATGAGGATTATC+TGG 0.384878 7.1:+35580266 MS.gene94754:CDS
ATCAGTTCATTTACTGCTGC+TGG 0.398415 7.1:+35580384 MS.gene94754:CDS
TCAACTAGAAACATTCTGTT+TGG 0.399046 7.1:+35578312 MS.gene94754:CDS
TGCCTATCCTAATGAAAATA+CGG 0.414314 7.1:+35580305 MS.gene94754:CDS
ATCTTGATGGGAAATATCTA+TGG 0.417112 7.1:+35577659 MS.gene94754:CDS
TTGTTACCACCGGTAGAAAT+GGG 0.419232 7.1:-35580608 None:intergenic
GAAGAGGGTAAGATTGGTAT+TGG 0.419917 7.1:+35578231 MS.gene94754:CDS
CTACCTTCCATGGAGTTCCT+TGG 0.426171 7.1:-35577712 None:intergenic
AAGGTAATCAAGGTGGAAAA+TGG 0.437559 7.1:+35580102 MS.gene94754:CDS
CCATCTGAAGAGGGTAAGAT+TGG 0.447622 7.1:+35578225 MS.gene94754:CDS
TGCAGACGGTTCTGATGATT+GGG 0.459209 7.1:-35580484 None:intergenic
GGCTGCTGCTACTTGTTGCA+AGG 0.459282 7.1:-35580668 None:intergenic
AGGAGGAGTGTTGCAAATGC+TGG 0.460508 7.1:+35578389 MS.gene94754:CDS
CAAAGCGTGCAAGATCTTGA+TGG 0.464561 7.1:+35577646 MS.gene94754:CDS
TGAAAGTTGCAGGGGCACTA+AGG 0.480857 7.1:-35580689 None:intergenic
ATGGTGTTTCACATCTAGAA+AGG 0.481254 7.1:+35578702 MS.gene94754:CDS
CGTGCCAAAAGTTCTTGAAT+CGG 0.481811 7.1:+35580419 MS.gene94754:CDS
TCCAGAAACTATATTAGTCT+TGG 0.482456 7.1:-35580454 None:intergenic
TCTGTCACCATAAACGTTGT+TGG 0.488127 7.1:-35578647 None:intergenic
CTTCCAACCACTACCTTCCA+TGG 0.491265 7.1:-35577722 None:intergenic
TGAGTCCAGAGAGATGTTTA+CGG 0.491599 7.1:+35578466 MS.gene94754:CDS
GGTAAGATTGGTATTGGAAA+GGG 0.492219 7.1:+35578237 MS.gene94754:CDS
GTTGACATCAAAGGTAATCA+AGG 0.494235 7.1:+35580092 MS.gene94754:intron
TGAAGTTACATTGAAAGTTA+TGG 0.495205 7.1:+35577462 MS.gene94754:CDS
ATAGTTTGTAATACTATGGC+TGG 0.501997 7.1:+35577418 None:intergenic
GACGGTTCTGATGATTGGGC+AGG 0.504109 7.1:-35580480 None:intergenic
AGTACTTTATCTGTGAGGGC+TGG 0.520016 7.1:+35577776 MS.gene94754:CDS
GCAGATGCTGATAAAGCTAC+TGG 0.523429 7.1:+35578281 MS.gene94754:CDS
GAGGAACTGCTACTGCATGC+TGG 0.524313 7.1:-35580751 None:intergenic
AATATCGATGCAGCTTAAAG+AGG 0.527115 7.1:-35578421 None:intergenic
ACTCCAATGTCATCGTTTGA+TGG 0.532598 7.1:+35578683 MS.gene94754:CDS
ACTCACCTAAGTAGTGTTTG+AGG 0.535054 7.1:-35578922 None:intergenic
TGTCGTTAATATTGGAGTGA+AGG 0.536937 7.1:+35578757 MS.gene94754:CDS
TTCCTCCCCATTTCTACCGG+TGG 0.538156 7.1:+35580602 MS.gene94754:CDS
GCCTATCCTAATGAAAATAC+GGG 0.538669 7.1:+35580306 MS.gene94754:CDS
TGTGACCGTAAACATCTCTC+TGG 0.540356 7.1:-35578471 None:intergenic
TTCACATCTAGAAAGGTTGA+AGG 0.541814 7.1:+35578709 MS.gene94754:CDS
ACGACGAATGTATTTACCTC+TGG 0.542508 7.1:+35580531 MS.gene94754:CDS
CGTTAATATTGGAGTGAAGG+AGG 0.542677 7.1:+35578760 MS.gene94754:CDS
GCTGCTGCTACTTGTTGCAA+GGG 0.544845 7.1:-35580667 None:intergenic
AGTCTTGAAATAGTCCCTAA+AGG 0.549076 7.1:-35577565 None:intergenic
AAGCCCACATCTGCATATGT+TGG 0.550465 7.1:-35578201 None:intergenic
AAACATTCTGTTTGGTATAG+CGG 0.551853 7.1:+35578320 MS.gene94754:CDS
TCGACATCTGCTTTGACTAA+CGG 0.558603 7.1:+35578899 MS.gene94754:CDS
GGGTAAGATTGGTATTGGAA+AGG 0.563253 7.1:+35578236 MS.gene94754:CDS
TCTGTATGCTGATGCAGAGA+AGG 0.564015 7.1:+35577507 MS.gene94754:CDS
GTTTATGGTGACAGACGAGC+TGG 0.566916 7.1:+35578655 MS.gene94754:CDS
AAAGCGTGCAAGATCTTGAT+GGG 0.571030 7.1:+35577647 MS.gene94754:CDS
TGCTAGTACTGAAAGTTGCA+GGG 0.572931 7.1:-35580698 None:intergenic
GAGAGGAGTCTTCGAGAGCA+AGG 0.573388 7.1:-35578154 None:intergenic
GAAACCAACATATGCAGATG+TGG 0.574415 7.1:+35578197 MS.gene94754:CDS
TGTGGGCTTGCCATCTGAAG+AGG 0.579643 7.1:+35578215 MS.gene94754:CDS
AGGAACTCCATGGAAGGTAG+TGG 0.582059 7.1:+35577715 MS.gene94754:CDS
GATCGAGCTTCGCTTTGAGT+CGG 0.583927 7.1:-35580364 None:intergenic
CCAATCTTACCCTCTTCAGA+TGG 0.588628 7.1:-35578225 None:intergenic
GTAAAATTATTTGTTACCAC+CGG 0.588658 7.1:-35580618 None:intergenic
TGGGAAATATCTATGGTCAC+AGG 0.588806 7.1:+35577666 MS.gene94754:CDS
AACTCAAAAGTTGACATCAA+AGG 0.591748 7.1:+35580083 MS.gene94754:intron
AACGGCCTCAAACACTACTT+AGG 0.596286 7.1:+35578917 MS.gene94754:CDS
ACATGAGGATTATCTGGAGT+TGG 0.600618 7.1:+35580272 MS.gene94754:CDS
ATCTGCTTACCCTCTTCAGA+TGG 0.600894 7.1:-35578264 None:intergenic
ACTCCATGGAAGGTAGTGGT+TGG 0.601095 7.1:+35577719 MS.gene94754:CDS
ACTCAAGCCAAGGAACTCCA+TGG 0.606428 7.1:+35577705 MS.gene94754:CDS
TTTAAGATAAAGTCTGTGAG+AGG 0.607200 7.1:-35578171 None:intergenic
TCACAGATAAAGTACTGTAT+CGG 0.608824 7.1:-35577769 None:intergenic
ACACCATCAAACGATGACAT+TGG 0.611312 7.1:-35578686 None:intergenic
AAGAAATGCTACTCAAGCCA+AGG 0.611550 7.1:+35577695 MS.gene94754:CDS
TTGACTTGAAATGTTGCCAG+AGG 0.611651 7.1:-35580547 None:intergenic
AAAGGGCTTACCATCTGAAG+AGG 0.612181 7.1:+35578254 MS.gene94754:CDS
CATTCTGTTTGGTATAGCGG+AGG 0.612193 7.1:+35578323 MS.gene94754:CDS
ATACAGTACTTTATCTGTGA+GGG 0.612215 7.1:+35577772 MS.gene94754:CDS
ACGGTTCTGATGATTGGGCA+GGG 0.614446 7.1:-35580479 None:intergenic
ATTCTGTATGAGTGCACATG+AGG 0.618256 7.1:+35580257 MS.gene94754:CDS
TTTCCTCAATGTCATTTAGG+GGG 0.620430 7.1:-35578733 None:intergenic
AGTTACATTGAAAGTTATGG+TGG 0.626014 7.1:+35577465 MS.gene94754:CDS
GTGGGCTTGCCATCTGAAGA+GGG 0.626736 7.1:+35578216 MS.gene94754:CDS
ATTTCCTCAATGTCATTTAG+GGG 0.628156 7.1:-35578734 None:intergenic
AAACCAACATATGCAGATGT+GGG 0.635581 7.1:+35578198 MS.gene94754:CDS
TGTTACCACCGGTAGAAATG+GGG 0.638118 7.1:-35580607 None:intergenic
GGAGTGTTGCAAATGCTGGA+AGG 0.639897 7.1:+35578393 MS.gene94754:CDS
AAGCCAAGGAACTCCATGGA+AGG 0.641089 7.1:+35577709 MS.gene94754:CDS
TACCACCGGTAGAAATGGGG+AGG 0.662813 7.1:-35580604 None:intergenic
GACATCAAAGGTAATCAAGG+TGG 0.663408 7.1:+35580095 MS.gene94754:CDS
AAGGGCTTACCATCTGAAGA+GGG 0.666261 7.1:+35578255 MS.gene94754:CDS
GCTAGTACTGAAAGTTGCAG+GGG 0.670831 7.1:-35580697 None:intergenic
ATTTGCAACACTCCTCCTAG+AGG 0.676162 7.1:-35578384 None:intergenic
TATCCTAATGAAAATACGGG+TGG 0.676591 7.1:+35580309 MS.gene94754:CDS
GTTAGTCAAAGCAGATGTCG+AGG 0.681782 7.1:-35578897 None:intergenic
AATGATGTAGATACTGCAGA+CGG 0.697541 7.1:-35580498 None:intergenic
GATACAGTACTTTATCTGTG+AGG 0.719909 7.1:+35577771 MS.gene94754:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATATTTATGTTTATATCTGT+AGG + chr7.1:35578110-35578129 MS.gene94754:intron 15.0%
!! ATTTATCTTTAGATAATTAC+TGG + chr7.1:35579031-35579050 MS.gene94754:intron 15.0%
!! TATATAAATTACTACTATAG+AGG + chr7.1:35579445-35579464 MS.gene94754:intron 15.0%
!! TCAAATGTTATAAAACAAAA+TGG - chr7.1:35579269-35579288 None:intergenic 15.0%
!! TTTAAAAATCAAGAAAAGAA+GGG + chr7.1:35579598-35579617 MS.gene94754:intron 15.0%
!!! CTTTTTTCTTTATATTATCA+TGG + chr7.1:35579655-35579674 MS.gene94754:intron 15.0%
!!! TTTTAAAAATCAAGAAAAGA+AGG + chr7.1:35579597-35579616 MS.gene94754:intron 15.0%
!! AAAAAAAAATAAACACATGC+AGG + chr7.1:35579898-35579917 MS.gene94754:intron 20.0%
!! AAATAATGATCAAATCTTGA+TGG - chr7.1:35580058-35580077 None:intergenic 20.0%
!! AATATTGAAGCAATGAAATT+TGG + chr7.1:35577604-35577623 MS.gene94754:CDS 20.0%
!! ATCAAGATTTGATCATTATT+TGG + chr7.1:35580057-35580076 MS.gene94754:intron 20.0%
!! TGAAAAAATCAAGAAAAGAA+GGG + chr7.1:35579621-35579640 MS.gene94754:intron 20.0%
!! TTATATATCTGTGAAATGAA+AGG - chr7.1:35579432-35579451 None:intergenic 20.0%
!!! AACATTTCAAGTCAAAATAA+TGG + chr7.1:35580555-35580574 MS.gene94754:CDS 20.0%
!!! AATGGATTTGATAAAAGATA+TGG + chr7.1:35577889-35577908 MS.gene94754:intron 20.0%
!!! ATTTTCATCTATGCAAATTT+TGG + chr7.1:35579208-35579227 MS.gene94754:intron 20.0%
!!! GAGTTTACTTTTTCTAAATT+TGG + chr7.1:35580333-35580352 MS.gene94754:CDS 20.0%
!!! TTTACTTTTTCTAAATTTGG+TGG + chr7.1:35580336-35580355 MS.gene94754:CDS 20.0%
!!! TTTTCATCTATGCAAATTTT+GGG + chr7.1:35579209-35579228 MS.gene94754:intron 20.0%
! AAAAATTGGCAAAACCATTA+AGG + chr7.1:35579168-35579187 MS.gene94754:intron 25.0%
! AAACATAGAAAAAGAAGAGA+AGG + chr7.1:35579503-35579522 MS.gene94754:intron 25.0%
! AATGATCTTGTAAAAGGTTT+AGG + chr7.1:35577950-35577969 MS.gene94754:intron 25.0%
! AGAAAGATTGAAATGTAAGA+AGG + chr7.1:35579527-35579546 MS.gene94754:intron 25.0%
! AGAGAAAATCAAGAAAAGAA+GGG + chr7.1:35579554-35579573 MS.gene94754:intron 25.0%
! ATTCCATAATTTAACTGTTG+AGG + chr7.1:35579846-35579865 MS.gene94754:intron 25.0%
! GAAAGATTGAAATGTAAGAA+GGG + chr7.1:35579528-35579547 MS.gene94754:intron 25.0%
! GGTAGTAAATTAGTGTATAA+TGG - chr7.1:35579138-35579157 None:intergenic 25.0%
! GTGAAAAAATCAAGAAAAGA+AGG + chr7.1:35579620-35579639 MS.gene94754:intron 25.0%
! TACCATCTTCTCATAAAAAT+TGG + chr7.1:35579154-35579173 MS.gene94754:intron 25.0%
! TGAAGTTACATTGAAAGTTA+TGG + chr7.1:35577462-35577481 MS.gene94754:CDS 25.0%
! TTCGAGCTTATTTATTTGTA+AGG - chr7.1:35579814-35579833 None:intergenic 25.0%
! TTGACATTTCTTATCCTTAA+TGG - chr7.1:35579185-35579204 None:intergenic 25.0%
! TTTATCAAATCCATTGTCAA+AGG - chr7.1:35577884-35577903 None:intergenic 25.0%
!! AAACCTTTTACAAGATCATT+AGG - chr7.1:35577950-35577969 None:intergenic 25.0%
!! AATTGGTACTTGTTGAAATT+TGG + chr7.1:35579776-35579795 MS.gene94754:intron 25.0%
!! AATTTCCTCAATGTCATTTA+GGG - chr7.1:35578738-35578757 None:intergenic 25.0%
!! ATTGGTACTTGTTGAAATTT+GGG + chr7.1:35579777-35579796 MS.gene94754:intron 25.0%
!! GTAAAATTATTTGTTACCAC+CGG - chr7.1:35580621-35580640 None:intergenic 25.0%
!! TTCTCTTCTTTTTCTATGTT+TGG - chr7.1:35579504-35579523 None:intergenic 25.0%
!!! TCTTGTTAAGAGTTTTGAAT+TGG + chr7.1:35579735-35579754 MS.gene94754:intron 25.0%
AAAAATAAACACATGCAGGT+CGG + chr7.1:35579902-35579921 MS.gene94754:intron 30.0%
AAACATTCTGTTTGGTATAG+CGG + chr7.1:35578320-35578339 MS.gene94754:CDS 30.0%
AACTCAAAAGTTGACATCAA+AGG + chr7.1:35580083-35580102 MS.gene94754:intron 30.0%
ACTTCATTCAGTATTTCACA+TGG - chr7.1:35579078-35579097 None:intergenic 30.0%
ACTTTCTGATAGATATGACT+TGG - chr7.1:35580200-35580219 None:intergenic 30.0%
AGTTACATTGAAAGTTATGG+TGG + chr7.1:35577465-35577484 MS.gene94754:CDS 30.0%
ATACAGTACTTTATCTGTGA+GGG + chr7.1:35577772-35577791 MS.gene94754:CDS 30.0%
ATCTTGATGGGAAATATCTA+TGG + chr7.1:35577659-35577678 MS.gene94754:CDS 30.0%
CAACCTCAACAGTTAAATTA+TGG - chr7.1:35579852-35579871 None:intergenic 30.0%
CCATATGTAGGAAAAATTTG+AGG - chr7.1:35578522-35578541 None:intergenic 30.0%
CTTCATTCAGTATTTCACAT+GGG - chr7.1:35579077-35579096 None:intergenic 30.0%
CTTTCTTCTTATACAATGCA+TGG + chr7.1:35579935-35579954 MS.gene94754:intron 30.0%
GAAATACTGAATGAAGTAGT+AGG + chr7.1:35579081-35579100 MS.gene94754:intron 30.0%
GAGAGAAAATCAAGAAAAGA+AGG + chr7.1:35579553-35579572 MS.gene94754:intron 30.0%
GAGGAAATTGTCGTTAATAT+TGG + chr7.1:35578749-35578768 MS.gene94754:CDS 30.0%
TCAACTAGAAACATTCTGTT+TGG + chr7.1:35578312-35578331 MS.gene94754:CDS 30.0%
TGCCTATCCTAATGAAAATA+CGG + chr7.1:35580305-35580324 MS.gene94754:CDS 30.0%
TGTTACAATACTTTCCACAA+AGG - chr7.1:35577840-35577859 None:intergenic 30.0%
! ATTTCCTCAATGTCATTTAG+GGG - chr7.1:35578737-35578756 None:intergenic 30.0%
! CAATTTCCTCAATGTCATTT+AGG - chr7.1:35578739-35578758 None:intergenic 30.0%
! CCTCAAATTTTTCCTACATA+TGG + chr7.1:35578519-35578538 MS.gene94754:intron 30.0%
! GATTGCGTAATTTGTATCTA+TGG + chr7.1:35578835-35578854 MS.gene94754:intron 30.0%
! GTAATTTGTATCTATGGTGA+TGG + chr7.1:35578841-35578860 MS.gene94754:intron 30.0%
! TAACTGTTGAGGTTGAATTT+TGG + chr7.1:35579857-35579876 MS.gene94754:intron 30.0%
! TCCAGAAACTATATTAGTCT+TGG - chr7.1:35580457-35580476 None:intergenic 30.0%
! TGAACTGTGTGAGTATTTTT+AGG + chr7.1:35577803-35577822 MS.gene94754:intron 30.0%
! TGCCAATTTTTATGAGAAGA+TGG - chr7.1:35579159-35579178 None:intergenic 30.0%
! TGTAATGTATGACGAGATTT+TGG - chr7.1:35578967-35578986 None:intergenic 30.0%
! TTATCCGATTCAAGAACTTT+TGG - chr7.1:35580426-35580445 None:intergenic 30.0%
! TTGGTACTTGTTGAAATTTG+GGG + chr7.1:35579778-35579797 MS.gene94754:intron 30.0%
! TTTAAGATAAAGTCTGTGAG+AGG - chr7.1:35578174-35578193 None:intergenic 30.0%
! TTTTTCCTACATATGGAGTA+AGG + chr7.1:35578526-35578545 MS.gene94754:intron 30.0%
!! ATAGATATGACTTGGTTTCT+TGG - chr7.1:35580192-35580211 None:intergenic 30.0%
!! ATGACGAGATTTTGGTAATT+TGG - chr7.1:35578959-35578978 None:intergenic 30.0%
!! TAGATATGACTTGGTTTCTT+GGG - chr7.1:35580191-35580210 None:intergenic 30.0%
!! TCACAGATAAAGTACTGTAT+CGG - chr7.1:35577772-35577791 None:intergenic 30.0%
AAACCAACATATGCAGATGT+GGG + chr7.1:35578198-35578217 MS.gene94754:CDS 35.0%
AAATCCATTGTCAAAGGAAC+TGG - chr7.1:35577878-35577897 None:intergenic 35.0%
AAGGTAATCAAGGTGGAAAA+TGG + chr7.1:35580102-35580121 MS.gene94754:CDS 35.0%
AATATCGATGCAGCTTAAAG+AGG - chr7.1:35578424-35578443 None:intergenic 35.0%
AATCCATTGTCAAAGGAACT+GGG - chr7.1:35577877-35577896 None:intergenic 35.0%
AATGATGTAGATACTGCAGA+CGG - chr7.1:35580501-35580520 None:intergenic 35.0%
ACGCCTAATGATCTTGTAAA+AGG + chr7.1:35577944-35577963 MS.gene94754:intron 35.0%
AGTCTTGAAATAGTCCCTAA+AGG - chr7.1:35577568-35577587 None:intergenic 35.0%
AGTTTCTTGACATTGCCTTT+AGG + chr7.1:35577550-35577569 MS.gene94754:CDS 35.0%
ATGGTGTTTCACATCTAGAA+AGG + chr7.1:35578702-35578721 MS.gene94754:CDS 35.0%
CTGTGAAATGAAAGGTAATG+TGG - chr7.1:35579424-35579443 None:intergenic 35.0%
GAATGAAGTAGTAGGTAGTT+TGG + chr7.1:35579089-35579108 MS.gene94754:intron 35.0%
GATACAGTACTTTATCTGTG+AGG + chr7.1:35577771-35577790 MS.gene94754:CDS 35.0%
GCCAAGACTAATATAGTTTC+TGG + chr7.1:35580453-35580472 MS.gene94754:CDS 35.0%
GCCTATCCTAATGAAAATAC+GGG + chr7.1:35580306-35580325 MS.gene94754:CDS 35.0%
GTTGACATCAAAGGTAATCA+AGG + chr7.1:35580092-35580111 MS.gene94754:intron 35.0%
GTTTCTTGACATTGCCTTTA+GGG + chr7.1:35577551-35577570 MS.gene94754:CDS 35.0%
TATCCTAATGAAAATACGGG+TGG + chr7.1:35580309-35580328 MS.gene94754:CDS 35.0%
TGTCGTTAATATTGGAGTGA+AGG + chr7.1:35578757-35578776 MS.gene94754:CDS 35.0%
TTAGGTTTACTGCAGATGAA+CGG + chr7.1:35577968-35577987 MS.gene94754:intron 35.0%
TTCACATCTAGAAAGGTTGA+AGG + chr7.1:35578709-35578728 MS.gene94754:CDS 35.0%
! ACCCGTATTTTCATTAGGAT+AGG - chr7.1:35580310-35580329 None:intergenic 35.0%
! AGTTTTCTGACTTTTCCTCT+AGG + chr7.1:35578369-35578388 MS.gene94754:CDS 35.0%
! CTTTTTAACCATGAAGTGTG+TGG - chr7.1:35579237-35579256 None:intergenic 35.0%
! GGTAAGATTGGTATTGGAAA+GGG + chr7.1:35578237-35578256 MS.gene94754:CDS 35.0%
! TTTCCTCAATGTCATTTAGG+GGG - chr7.1:35578736-35578755 None:intergenic 35.0%
!! TGTGGAAAGTATTGTAACAG+AGG + chr7.1:35577841-35577860 MS.gene94754:intron 35.0%
!!! ACAGAATGCCCTCTTTTTTT+AGG - chr7.1:35580244-35580263 None:intergenic 35.0%
!!! CAGAATGCCCTCTTTTTTTA+GGG - chr7.1:35580243-35580262 None:intergenic 35.0%
AAAGCGTGCAAGATCTTGAT+GGG + chr7.1:35577647-35577666 MS.gene94754:CDS 40.0%
AACACTACTTATCAGCACGA+AGG + chr7.1:35578021-35578040 MS.gene94754:intron 40.0%
AAGAAATGCTACTCAAGCCA+AGG + chr7.1:35577695-35577714 MS.gene94754:CDS 40.0%
AAGTCTGTTTCACCGAATGA+TGG + chr7.1:35580129-35580148 MS.gene94754:intron 40.0%
ACACCATCAAACGATGACAT+TGG - chr7.1:35578689-35578708 None:intergenic 40.0%
ACGACGAATGTATTTACCTC+TGG + chr7.1:35580531-35580550 MS.gene94754:CDS 40.0%
ACTCACCTAAGTAGTGTTTG+AGG - chr7.1:35578925-35578944 None:intergenic 40.0%
ACTCCAATGTCATCGTTTGA+TGG + chr7.1:35578683-35578702 MS.gene94754:CDS 40.0%
AGGGACTATTTCAAGACTTC+TGG + chr7.1:35577570-35577589 MS.gene94754:CDS 40.0%
ATCAGTTCATTTACTGCTGC+TGG + chr7.1:35580384-35580403 MS.gene94754:CDS 40.0%
ATTCTGTATGAGTGCACATG+AGG + chr7.1:35580257-35580276 MS.gene94754:CDS 40.0%
ATTGGAGTGAAGGAGGTAAA+GGG + chr7.1:35578767-35578786 MS.gene94754:intron 40.0%
CGTGCCAAAAGTTCTTGAAT+CGG + chr7.1:35580419-35580438 MS.gene94754:CDS 40.0%
CGTTAATATTGGAGTGAAGG+AGG + chr7.1:35578760-35578779 MS.gene94754:CDS 40.0%
GAAACCAACATATGCAGATG+TGG + chr7.1:35578197-35578216 MS.gene94754:CDS 40.0%
GAAGAGGGTAAGATTGGTAT+TGG + chr7.1:35578231-35578250 MS.gene94754:CDS 40.0%
GACATCAAAGGTAATCAAGG+TGG + chr7.1:35580095-35580114 MS.gene94754:CDS 40.0%
GCGGGAATTAATCCATCATT+CGG - chr7.1:35580144-35580163 None:intergenic 40.0%
TATTGGAGTGAAGGAGGTAA+AGG + chr7.1:35578766-35578785 MS.gene94754:intron 40.0%
TCGACATCTGCTTTGACTAA+CGG + chr7.1:35578899-35578918 MS.gene94754:CDS 40.0%
TCTGTCACCATAAACGTTGT+TGG - chr7.1:35578650-35578669 None:intergenic 40.0%
TGACCCTCCCTAAAAAAAGA+GGG + chr7.1:35580233-35580252 MS.gene94754:intron 40.0%
TGAGTCCAGAGAGATGTTTA+CGG + chr7.1:35578466-35578485 MS.gene94754:CDS 40.0%
TGCTTCCTTACTCCATATGT+AGG - chr7.1:35578534-35578553 None:intergenic 40.0%
TGGGAAATATCTATGGTCAC+AGG + chr7.1:35577666-35577685 MS.gene94754:CDS 40.0%
TTGTTACCACCGGTAGAAAT+GGG - chr7.1:35580611-35580630 None:intergenic 40.0%
TTTCCCAGTTCCTTTGACAA+TGG + chr7.1:35577871-35577890 MS.gene94754:intron 40.0%
TTTGTTACCACCGGTAGAAA+TGG - chr7.1:35580612-35580631 None:intergenic 40.0%
! ACATGAGGATTATCTGGAGT+TGG + chr7.1:35580272-35580291 MS.gene94754:CDS 40.0%
! ATGCTAGTACTGAAAGTTGC+AGG - chr7.1:35580702-35580721 None:intergenic 40.0%
! ATTTTCCTCCCCATTTCTAC+CGG + chr7.1:35580599-35580618 MS.gene94754:CDS 40.0%
! CGATTCAAGAACTTTTGGCA+CGG - chr7.1:35580421-35580440 None:intergenic 40.0%
! GGGTAAGATTGGTATTGGAA+AGG + chr7.1:35578236-35578255 MS.gene94754:CDS 40.0%
! TCTCCACCCGTATTTTCATT+AGG - chr7.1:35580315-35580334 None:intergenic 40.0%
! TGCTAGTACTGAAAGTTGCA+GGG - chr7.1:35580701-35580720 None:intergenic 40.0%
! TTGACTTGAAATGTTGCCAG+AGG - chr7.1:35580550-35580569 None:intergenic 40.0%
! TTTCTGACTTTTCCTCTAGG+AGG + chr7.1:35578372-35578391 MS.gene94754:CDS 40.0%
!! ACTTTCCACAAAGGCATTTC+TGG - chr7.1:35577831-35577850 None:intergenic 40.0%
!! TATAGCGGAGGAAGATTTTG+CGG + chr7.1:35578335-35578354 MS.gene94754:CDS 40.0%
!!! AATGCCCTCTTTTTTTAGGG+AGG - chr7.1:35580240-35580259 None:intergenic 40.0%
!!! ATGCCCTCTTTTTTTAGGGA+GGG - chr7.1:35580239-35580258 None:intergenic 40.0%
!!! GTCTACACAGCTGTTTTGAT+TGG - chr7.1:35578564-35578583 None:intergenic 40.0%
AAAGGGCTTACCATCTGAAG+AGG + chr7.1:35578254-35578273 MS.gene94754:CDS 45.0%
AACGGCCTCAAACACTACTT+AGG + chr7.1:35578917-35578936 MS.gene94754:CDS 45.0%
AAGCCCACATCTGCATATGT+TGG - chr7.1:35578204-35578223 None:intergenic 45.0%
AAGGGCTTACCATCTGAAGA+GGG + chr7.1:35578255-35578274 MS.gene94754:CDS 45.0%
ACCATAAACGTTGTTGGTCC+TGG - chr7.1:35578644-35578663 None:intergenic 45.0%
ACTACTTATCAGCACGAAGG+AGG + chr7.1:35578024-35578043 MS.gene94754:intron 45.0%
AGGAACCAGAAATGCCTTTG+TGG + chr7.1:35577823-35577842 MS.gene94754:intron 45.0%
AGTACTTTATCTGTGAGGGC+TGG + chr7.1:35577776-35577795 MS.gene94754:CDS 45.0%
ATCTGCTTACCCTCTTCAGA+TGG - chr7.1:35578267-35578286 None:intergenic 45.0%
ATTTGCAACACTCCTCCTAG+AGG - chr7.1:35578387-35578406 None:intergenic 45.0%
CAAAACAGCTGTGTAGACAG+TGG + chr7.1:35578566-35578585 MS.gene94754:intron 45.0%
CAAAGCGTGCAAGATCTTGA+TGG + chr7.1:35577646-35577665 MS.gene94754:CDS 45.0%
CATTCTGTTTGGTATAGCGG+AGG + chr7.1:35578323-35578342 MS.gene94754:CDS 45.0%
CCAATCTTACCCTCTTCAGA+TGG - chr7.1:35578228-35578247 None:intergenic 45.0%
CCATAAACGTTGTTGGTCCT+GGG - chr7.1:35578643-35578662 None:intergenic 45.0%
CCATCTGAAGAGGGTAAGAT+TGG + chr7.1:35578225-35578244 MS.gene94754:CDS 45.0%
CTGACCCTCCCTAAAAAAAG+AGG + chr7.1:35580232-35580251 MS.gene94754:intron 45.0%
GACATATCCTCCAGAAACAG+GGG - chr7.1:35578621-35578640 None:intergenic 45.0%
GAGTGCACATGAGGATTATC+TGG + chr7.1:35580266-35580285 MS.gene94754:CDS 45.0%
GCAGATGCTGATAAAGCTAC+TGG + chr7.1:35578281-35578300 MS.gene94754:CDS 45.0%
GGACATATCCTCCAGAAACA+GGG - chr7.1:35578622-35578641 None:intergenic 45.0%
GGATTAATTCCCGCAGTAAC+TGG + chr7.1:35580150-35580169 MS.gene94754:intron 45.0%
GTTAGTCAAAGCAGATGTCG+AGG - chr7.1:35578900-35578919 None:intergenic 45.0%
TCTGTATGCTGATGCAGAGA+AGG + chr7.1:35577507-35577526 MS.gene94754:CDS 45.0%
TGAGTCTGAACCAGTTACTG+CGG - chr7.1:35580163-35580182 None:intergenic 45.0%
TGTGACCGTAAACATCTCTC+TGG - chr7.1:35578474-35578493 None:intergenic 45.0%
TGTTACCACCGGTAGAAATG+GGG - chr7.1:35580610-35580629 None:intergenic 45.0%
! CATTCGGTGAAACAGACTTC+AGG - chr7.1:35580128-35580147 None:intergenic 45.0%
! GCTAGTACTGAAAGTTGCAG+GGG - chr7.1:35580700-35580719 None:intergenic 45.0%
! TGCAGACGGTTCTGATGATT+GGG - chr7.1:35580487-35580506 None:intergenic 45.0%
!! ATGACTTGGTTTCTTGGGAC+AGG - chr7.1:35580186-35580205 None:intergenic 45.0%
!! GTATCTATGGTGATGGTGCA+GGG + chr7.1:35578848-35578867 MS.gene94754:intron 45.0%
!! TGTATCTATGGTGATGGTGC+AGG + chr7.1:35578847-35578866 MS.gene94754:intron 45.0%
AAGCCAAGGAACTCCATGGA+AGG + chr7.1:35577709-35577728 MS.gene94754:CDS 50.0%
ACTCAAGCCAAGGAACTCCA+TGG + chr7.1:35577705-35577724 MS.gene94754:CDS 50.0%
AGGAACTCCATGGAAGGTAG+TGG + chr7.1:35577715-35577734 MS.gene94754:CDS 50.0%
CCCAGGACCAACAACGTTTA+TGG + chr7.1:35578640-35578659 MS.gene94754:intron 50.0%
CCTCCAGAAACAGGGGATTT+GGG - chr7.1:35578614-35578633 None:intergenic 50.0%
CTACCTTCCATGGAGTTCCT+TGG - chr7.1:35577715-35577734 None:intergenic 50.0%
CTTCCAACCACTACCTTCCA+TGG - chr7.1:35577725-35577744 None:intergenic 50.0%
GAGTCTGAACCAGTTACTGC+GGG - chr7.1:35580162-35580181 None:intergenic 50.0%
GATCCCAAATCCCCTGTTTC+TGG + chr7.1:35578608-35578627 MS.gene94754:intron 50.0%
GGGACATATCCTCCAGAAAC+AGG - chr7.1:35578623-35578642 None:intergenic 50.0%
GGTCCCCCTAAATGACATTG+AGG + chr7.1:35578730-35578749 MS.gene94754:CDS 50.0%
GTTTATGGTGACAGACGAGC+TGG + chr7.1:35578655-35578674 MS.gene94754:CDS 50.0%
TCCTCCAGAAACAGGGGATT+TGG - chr7.1:35578615-35578634 None:intergenic 50.0%
TTTGGGAGCCACACACTTCA+TGG + chr7.1:35579226-35579245 MS.gene94754:intron 50.0%
! ACGGTTCTGATGATTGGGCA+GGG - chr7.1:35580482-35580501 None:intergenic 50.0%
! ACTCCATGGAAGGTAGTGGT+TGG + chr7.1:35577719-35577738 MS.gene94754:CDS 50.0%
! CTGCAGACGGTTCTGATGAT+TGG - chr7.1:35580488-35580507 None:intergenic 50.0%
! GATCGAGCTTCGCTTTGAGT+CGG - chr7.1:35580367-35580386 None:intergenic 50.0%
! GCTGCTGCTACTTGTTGCAA+GGG - chr7.1:35580670-35580689 None:intergenic 50.0%
! GTTTCTGGAGGATATGTCCC+AGG + chr7.1:35578623-35578642 MS.gene94754:intron 50.0%
!! AGGAGGAGTGTTGCAAATGC+TGG + chr7.1:35578389-35578408 MS.gene94754:CDS 50.0%
!! GGAGTGTTGCAAATGCTGGA+AGG + chr7.1:35578393-35578412 MS.gene94754:CDS 50.0%
!! TGAAAGTTGCAGGGGCACTA+AGG - chr7.1:35580692-35580711 None:intergenic 50.0%
GAGAGGAGTCTTCGAGAGCA+AGG - chr7.1:35578157-35578176 None:intergenic 55.0%
GTGGGCTTGCCATCTGAAGA+GGG + chr7.1:35578216-35578235 MS.gene94754:CDS 55.0%
TACCACCGGTAGAAATGGGG+AGG - chr7.1:35580607-35580626 None:intergenic 55.0%
TGTGGGCTTGCCATCTGAAG+AGG + chr7.1:35578215-35578234 MS.gene94754:CDS 55.0%
TTCCTCCCCATTTCTACCGG+TGG + chr7.1:35580602-35580621 MS.gene94754:CDS 55.0%
! CGAAGGAGGCATGCTTTCTC+TGG + chr7.1:35578038-35578057 MS.gene94754:intron 55.0%
! GACGGTTCTGATGATTGGGC+AGG - chr7.1:35580483-35580502 None:intergenic 55.0%
! GGCTGCTGCTACTTGTTGCA+AGG - chr7.1:35580671-35580690 None:intergenic 55.0%
!! CCCAAATCCCCTGTTTCTGG+AGG + chr7.1:35578611-35578630 MS.gene94754:intron 55.0%
CAGCTGTGTAGACAGTGGCG+AGG + chr7.1:35578571-35578590 MS.gene94754:intron 60.0%


Chromosome Type Strat End Strand Name
chr7.1 gene 35577433 35580764 35577433 ID=MS.gene94754
chr7.1 mRNA 35577433 35580764 35577433 ID=MS.gene94754.t1;Parent=MS.gene94754
chr7.1 exon 35577433 35577810 35577433 ID=MS.gene94754.t1.exon1;Parent=MS.gene94754.t1
chr7.1 CDS 35577433 35577810 35577433 ID=cds.MS.gene94754.t1;Parent=MS.gene94754.t1
chr7.1 exon 35578132 35578513 35578132 ID=MS.gene94754.t1.exon2;Parent=MS.gene94754.t1
chr7.1 CDS 35578132 35578513 35578132 ID=cds.MS.gene94754.t1;Parent=MS.gene94754.t1
chr7.1 exon 35578645 35578781 35578645 ID=MS.gene94754.t1.exon3;Parent=MS.gene94754.t1
chr7.1 CDS 35578645 35578781 35578645 ID=cds.MS.gene94754.t1;Parent=MS.gene94754.t1
chr7.1 exon 35578869 35578938 35578869 ID=MS.gene94754.t1.exon4;Parent=MS.gene94754.t1
chr7.1 CDS 35578869 35578938 35578869 ID=cds.MS.gene94754.t1;Parent=MS.gene94754.t1
chr7.1 exon 35580093 35580130 35580093 ID=MS.gene94754.t1.exon5;Parent=MS.gene94754.t1
chr7.1 CDS 35580093 35580130 35580093 ID=cds.MS.gene94754.t1;Parent=MS.gene94754.t1
chr7.1 exon 35580252 35580764 35580252 ID=MS.gene94754.t1.exon6;Parent=MS.gene94754.t1
chr7.1 CDS 35580252 35580764 35580252 ID=cds.MS.gene94754.t1;Parent=MS.gene94754.t1
Gene Sequence

>MS.gene94754

ATGGCTGGCACTACAACTAAATCAGATGATGAAGTTACATTGAAAGTTATGGTGGACAGAGAAAGAAACAAAGTTCTGTATGCTGATGCAGAGAAGGATTTTGTTGACGTTCTTTTGAGTTTCTTGACATTGCCTTTAGGGACTATTTCAAGACTTCTGGCTAAAGAATCAAATATTGAAGCAATGAAATTTGGCAGCATTAGCTCACTTTATCAAAGCGTGCAAGATCTTGATGGGAAATATCTATGGTCACAGGAATGCAAAGAAATGCTACTCAAGCCAAGGAACTCCATGGAAGGTAGTGGTTGGAAGCTCAAACTGAACATCGATGACACACCGATACAGTACTTTATCTGTGAGGGCTGGATTATGAACTGTGTGAGTATTTTTAGGAACCAGAAATGCCTTTGTGGAAAGTATTGTAACAGAGGAGTTAACTTTCCCAGTTCCTTTGACAATGGATTTGATAAAAGATATGGCTAGTTTTATAATTCATGACGATCTTTCTGTAACGCCTAATGATCTTGTAAAAGGTTTAGGTTTACTGCAGATGAACGGAATCAATGACATTGCAGATATCGAGAGAAAAACACTACTTATCAGCACGAAGGAGGCATGCTTTCTCTGGCTTTTCTCAATTTCTATATTTTTATCACTGATGTTGATTTTTTAAATGAATATTTATGTTTATATCTGTAGGTAGTTGATCTTCTCAAGTTGTCCTTGCTCTCGAAGACTCCTCTCACAGACTTTATCTTAAAGAAGAAACCAACATATGCAGATGTGGGCTTGCCATCTGAAGAGGGTAAGATTGGTATTGGAAAGGGCTTACCATCTGAAGAGGGTAAGCAGATGCTGATAAAGCTACTGGTTAGAAAATCAACTAGAAACATTCTGTTTGGTATAGCGGAGGAAGATTTTGCGGACTTTCTTTTCAGTTTTCTGACTTTTCCTCTAGGAGGAGTGTTGCAAATGCTGGAAGGATTCTCCTCTTTAAGCTGCATCGATATTTTATATAAAAGCATGACTGAGTTGAGTCCAGAGAGATGTTTACGGTCACATGAACTTAAAAACAATCTAAGTAAGCCTCAAATTTTTCCTACATATGGAGTAAGGAAGCAGATTTTACCAATCAAAACAGCTGTGTAGACAGTGGCGAGGTCTTGAAATTTGTTGATCCCAAATCCCCTGTTTCTGGAGGATATGTCCCAGGACCAACAACGTTTATGGTGACAGACGAGCTGGTTGTGACTCCAATGTCATCGTTTGATGGTGTTTCACATCTAGAAAGGTTGAAGGTCCCCCTAAATGACATTGAGGAAATTGTCGTTAATATTGGAGTGAAGGAGGTAAAGGGATTGTCTGAGACAATATTTAGCACAATTTTTCATTAATATTTCTCGATTGCGTAATTTGTATCTATGGTGATGGTGCAGGGTCTCAGCATACTAAAAGCTTCATTGACCTCGACATCTGCTTTGACTAACGGCCTCAAACACTACTTAGGTGAGTTCAATATTCAACCAAATTACCAAAATCTCGTCATACATTACAATTATAATAAAAACAATATCAAAGCTCATGCAGAATTTGTTTTAATTTATCTTTAGATAATTACTGGTTGTTCTTTTATTCAAAAGTCCCATGTGAAATACTGAATGAAGTAGTAGGTAGTTTGGTCTGAATGAGTTAAGTATTATAACCATTATACACTAATTTACTACCATCTTCTCATAAAAATTGGCAAAACCATTAAGGATAAGAAATGTCAATTTATTTTCATCTATGCAAATTTTGGGAGCCACACACTTCATGGTTAAAAAGATTAGATTACCATTTTGTTTTATAACATTTGAGAGTAATTTAGTCTCTCATAATTTTGTTGATTTTTCTGTAAAATATTCTGAATTAGATCAATGATTTCTTTACTTTTCTTATCAATATTATTTCTTCTAGCATGATTAGTATTTTACTTGTTATAATATTTTCCACATTACCTTTCATTTCACAGATATATAAATTACTACTATAGAGGACAGTTAATGTTGAGAAAATATAGTAATTAAAACCAAACATAGAAAAAGAAGAGAAGGAAGAAAGATTGAAATGTAAGAAGGGAAGAGAGAAAATCAAGAAAAGAAGGGTGAAAAATGATCTTTTTTCTTTTTAAAAATCAAGAAAAGAAGGGTGAAAAAATCAAGAAAAGAAGGGTGAAAAATGATCTTTTTTCTTTATATTATCATGGTGACTATTTTCTTGTTATTTTTATTTTTCTTGTTAAGAGTTTTATTTTTCTTTCTTTTCTTGTTAAGAGTTTTGAATTGTTTCTTGTTAAGAGTTTTGAATTGGTACTTGTTGAAATTTGGGGTCTAACTCATCCTTACAAATAAATAAGCTCGAAACGTGAGTTATTATTCCATAATTTAACTGTTGAGGTTGAATTTTGGACAAGTGATGCTATTGAGAAAAAAAAATAAACACATGCAGGTCGGTCTCGTTTGTCTTTCTTCTTATACAATGCATGGTATAACTCTGCAAAATTTTGTATTAGTATATGATATGATATTACATTATTTGATGTATCTGTAATAGTTCTAGATCAAGATTTGATCTGTAATAGTTCCATCAAGATTTGATCATTATTTGGTATAACTCAAAAGTTGACATCAAAGGTAATCAAGGTGGAAAATGGCCTGAAGTCTGTTTCACCGAATGATGGATTAATTCCCGCAGTAACTGGTTCAGACTCACCTGTCCCAAGAAACCAAGTCATATCTATCAGAAAGTCTAGAGATTCTTCTGACCCTCCCTAAAAAAAGAGGGCATTCTGTATGAGTGCACATGAGGATTATCTGGAGTTGGATGATGATGATGCCTATCCTAATGAAAATACGGGTGGAGAGTTTACTTTTTCTAAATTTGGTGGAGCTTCCGACTCAAAGCGAAGCTCGATCAGTTCATTTACTGCTGCTGGTGACGTTGATTCCGTGCCAAAAGTTCTTGAATCGGATAATGCTGATGCCAAGACTAATATAGTTTCTGGATTCCCTGCCCAATCATCAGAACCGTCTGCAGTATCTACATCATTGTCAACATCAACGACGAATGTATTTACCTCTGGCAACATTTCAAGTCAAAATAATGGATTTGCTGCTTCAAGCTCTACATTTTCCTCCCCATTTCTACCGGTGGTAACAAATAATTTTACAAGTCAGAATATATTCAGCAGTTCAACCCTTGCAACAAGTAGCAGCAGCCTTAGTGCCCCTGCAACTTTCAGTACTAGCATGACAACTAGCAACATTGCTGTAAATGCATCCAGCATGCAGTAG
Protein sequence

>MS.gene94754.t1

MAGTTTKSDDEVTLKVMVDRERNKVLYADAEKDFVDVLLSFLTLPLGTISRLLAKESNIEAMKFGSISSLYQSVQDLDGKYLWSQECKEMLLKPRNSMEGSGWKLKLNIDDTPIQYFICEGWIMNCVVDLLKLSLLSKTPLTDFILKKKPTYADVGLPSEEGKIGIGKGLPSEEGKQMLIKLLVRKSTRNILFGIAEEDFADFLFSFLTFPLGGVLQMLEGFSSLSCIDILYKSMTELSPERCLRSHELKNNLRPTTFMVTDELVVTPMSSFDGVSHLERLKVPLNDIEEIVVNIGVKEGLSILKASLTSTSALTNGLKHYLVDIKGNQGGKWPERAFCMSAHEDYLELDDDDAYPNENTGGEFTFSKFGGASDSKRSSISSFTAAGDVDSVPKVLESDNADAKTNIVSGFPAQSSEPSAVSTSLSTSTTNVFTSGNISSQNNGFAASSSTFSSPFLPVVTNNFTSQNIFSSSTLATSSSSLSAPATFSTSMTTSNIAVNASSMQ