Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene84592.t1 | XP_013449064.1 | 76.4 | 478 | 110 | 2 | 1 | 477 | 1 | 476 | 4.50E-196 | 694.1 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene84592.t1 | A0A072U0X9 | 76.4 | 478 | 110 | 2 | 1 | 477 | 1 | 476 | 3.2e-196 | 694.1 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene84592.t1 | MTR_7g066340 | 76.360 | 478 | 110 | 2 | 1 | 477 | 1 | 476 | 0.0 | 729 |
MS.gene84592.t1 | MTR_7g066310 | 65.245 | 469 | 97 | 4 | 9 | 477 | 4 | 406 | 0.0 | 577 |
MS.gene84592.t1 | MTR_7g066310 | 28.947 | 228 | 121 | 8 | 8 | 233 | 189 | 377 | 3.48e-13 | 71.6 |
MS.gene84592.t1 | MTR_7g066350 | 66.885 | 459 | 137 | 8 | 1 | 454 | 1 | 449 | 0.0 | 577 |
MS.gene84592.t1 | MTR_7g066280 | 69.108 | 437 | 61 | 3 | 91 | 477 | 1 | 413 | 0.0 | 565 |
MS.gene84592.t1 | MTR_7g066280 | 27.203 | 261 | 133 | 8 | 8 | 233 | 146 | 384 | 1.63e-13 | 72.8 |
MS.gene84592.t1 | MTR_1g041315 | 64.588 | 449 | 136 | 8 | 7 | 438 | 9 | 451 | 0.0 | 561 |
MS.gene84592.t1 | MTR_7g066260 | 60.125 | 479 | 174 | 8 | 6 | 473 | 9 | 481 | 0.0 | 536 |
MS.gene84592.t1 | MTR_7g066400 | 57.962 | 471 | 147 | 8 | 1 | 454 | 1 | 437 | 5.93e-177 | 504 |
MS.gene84592.t1 | MTR_7g066570 | 56.352 | 488 | 165 | 9 | 3 | 454 | 5 | 480 | 1.77e-166 | 482 |
MS.gene84592.t1 | MTR_7g066360 | 55.306 | 490 | 181 | 12 | 6 | 476 | 8 | 478 | 3.11e-157 | 455 |
MS.gene84592.t1 | MTR_7g058710 | 49.899 | 497 | 186 | 12 | 1 | 454 | 1 | 477 | 2.16e-147 | 430 |
MS.gene84592.t1 | MTR_7g066290 | 55.142 | 457 | 167 | 9 | 6 | 455 | 9 | 434 | 2.95e-147 | 428 |
MS.gene84592.t1 | MTR_7g012680 | 52.754 | 472 | 176 | 10 | 3 | 456 | 5 | 447 | 4.41e-146 | 426 |
MS.gene84592.t1 | MTR_7g066580 | 46.516 | 488 | 163 | 12 | 18 | 454 | 1 | 441 | 1.33e-127 | 378 |
MS.gene84592.t1 | MTR_7g066580 | 28.516 | 256 | 138 | 10 | 4 | 235 | 207 | 441 | 4.90e-13 | 71.2 |
MS.gene84592.t1 | MTR_7g058700 | 49.111 | 450 | 151 | 11 | 24 | 454 | 531 | 921 | 2.11e-119 | 372 |
MS.gene84592.t1 | MTR_2g029400 | 44.915 | 472 | 149 | 10 | 6 | 442 | 8 | 403 | 5.18e-115 | 344 |
MS.gene84592.t1 | MTR_7g066430 | 41.020 | 490 | 234 | 10 | 12 | 454 | 4 | 485 | 1.01e-113 | 344 |
MS.gene84592.t1 | MTR_7g066410 | 39.804 | 510 | 231 | 14 | 13 | 454 | 11 | 512 | 1.28e-109 | 334 |
MS.gene84592.t1 | MTR_7g066410 | 28.512 | 242 | 134 | 8 | 12 | 233 | 284 | 506 | 6.75e-16 | 80.5 |
MS.gene84592.t1 | MTR_7g066480 | 40.393 | 458 | 212 | 12 | 11 | 456 | 15 | 423 | 9.73e-96 | 296 |
MS.gene84592.t1 | MTR_7g066480 | 28.251 | 223 | 118 | 8 | 262 | 448 | 14 | 230 | 2.15e-12 | 69.3 |
MS.gene84592.t1 | MTR_7g066490 | 40.830 | 458 | 204 | 13 | 12 | 461 | 16 | 414 | 1.29e-93 | 290 |
MS.gene84592.t1 | MTR_7g062300 | 37.681 | 483 | 254 | 13 | 1 | 450 | 1 | 469 | 8.08e-90 | 282 |
MS.gene84592.t1 | MTR_7g062280 | 36.614 | 508 | 245 | 15 | 1 | 454 | 1 | 485 | 1.01e-89 | 282 |
MS.gene84592.t1 | MTR_7g063660 | 36.214 | 486 | 246 | 15 | 11 | 454 | 8 | 471 | 2.84e-86 | 273 |
MS.gene84592.t1 | MTR_7g063820 | 37.931 | 493 | 252 | 14 | 1 | 454 | 1 | 478 | 7.68e-86 | 272 |
MS.gene84592.t1 | MTR_7g063880 | 37.014 | 489 | 253 | 16 | 5 | 461 | 4 | 469 | 9.18e-85 | 269 |
MS.gene84592.t1 | MTR_7g063900 | 38.767 | 503 | 238 | 17 | 1 | 454 | 1 | 482 | 5.98e-84 | 267 |
MS.gene84592.t1 | MTR_4g019310 | 35.088 | 513 | 257 | 16 | 6 | 460 | 2 | 496 | 3.95e-83 | 265 |
MS.gene84592.t1 | MTR_7g063830 | 36.344 | 465 | 252 | 12 | 5 | 454 | 3 | 438 | 6.41e-80 | 255 |
MS.gene84592.t1 | MTR_7g063840 | 35.802 | 486 | 253 | 15 | 1 | 450 | 1 | 463 | 5.16e-79 | 254 |
MS.gene84592.t1 | MTR_4g017440 | 34.442 | 511 | 257 | 14 | 6 | 454 | 8 | 502 | 8.71e-79 | 254 |
MS.gene84592.t1 | MTR_7g063890 | 38.008 | 492 | 238 | 13 | 11 | 454 | 26 | 498 | 3.42e-78 | 253 |
MS.gene84592.t1 | MTR_7g063920 | 35.865 | 474 | 233 | 10 | 5 | 454 | 4 | 430 | 5.45e-78 | 250 |
MS.gene84592.t1 | MTR_7g063920 | 31.308 | 214 | 109 | 10 | 261 | 458 | 7 | 198 | 4.26e-16 | 80.9 |
MS.gene84592.t1 | MTR_4g017830 | 33.019 | 530 | 272 | 17 | 1 | 465 | 1 | 512 | 3.87e-74 | 243 |
MS.gene84592.t1 | MTR_7g066680 | 47.826 | 299 | 93 | 5 | 216 | 451 | 37 | 335 | 3.13e-73 | 235 |
MS.gene84592.t1 | MTR_7g066680 | 29.204 | 226 | 137 | 9 | 2 | 219 | 77 | 287 | 1.63e-11 | 65.9 |
MS.gene84592.t1 | MTR_3g065200 | 35.484 | 465 | 210 | 13 | 10 | 441 | 1 | 408 | 3.40e-73 | 238 |
MS.gene84592.t1 | MTR_3g007740 | 35.546 | 467 | 246 | 14 | 11 | 454 | 8 | 442 | 2.39e-72 | 236 |
MS.gene84592.t1 | MTR_4g019340 | 34.091 | 484 | 255 | 14 | 10 | 444 | 35 | 503 | 2.44e-71 | 235 |
MS.gene84592.t1 | MTR_4g017610 | 33.266 | 496 | 263 | 17 | 2 | 451 | 3 | 476 | 7.34e-71 | 233 |
MS.gene84592.t1 | MTR_4g017410 | 33.206 | 524 | 271 | 20 | 6 | 476 | 3 | 500 | 4.91e-67 | 223 |
MS.gene84592.t1 | MTR_1g014060 | 52.000 | 225 | 100 | 5 | 21 | 243 | 9 | 227 | 3.89e-65 | 215 |
MS.gene84592.t1 | MTR_1g014060 | 49.143 | 175 | 75 | 3 | 294 | 454 | 210 | 384 | 3.34e-39 | 146 |
MS.gene84592.t1 | MTR_7g063670 | 34.322 | 472 | 252 | 14 | 8 | 454 | 13 | 451 | 1.14e-63 | 213 |
MS.gene84592.t1 | MTR_4g017470 | 30.056 | 539 | 261 | 15 | 1 | 476 | 1 | 486 | 3.79e-58 | 199 |
MS.gene84592.t1 | MTR_7g066390 | 58.228 | 158 | 38 | 1 | 305 | 462 | 1 | 130 | 1.83e-51 | 172 |
MS.gene84592.t1 | MTR_4g017550 | 30.271 | 479 | 244 | 20 | 39 | 452 | 18 | 471 | 3.20e-46 | 167 |
MS.gene84592.t1 | MTR_4g017550 | 27.311 | 238 | 130 | 8 | 12 | 228 | 247 | 462 | 2.40e-12 | 69.3 |
MS.gene84592.t1 | MTR_7g063720 | 39.252 | 214 | 117 | 3 | 254 | 454 | 13 | 226 | 2.28e-38 | 140 |
MS.gene84592.t1 | MTR_7g063720 | 28.879 | 232 | 136 | 9 | 3 | 233 | 17 | 220 | 5.79e-17 | 80.5 |
MS.gene84592.t1 | MTR_2g067310 | 42.857 | 175 | 58 | 4 | 23 | 197 | 58 | 190 | 1.22e-30 | 119 |
MS.gene84592.t1 | MTR_7g062270 | 38.587 | 184 | 88 | 6 | 13 | 185 | 11 | 180 | 1.26e-29 | 120 |
MS.gene84592.t1 | MTR_7g100420 | 33.538 | 325 | 159 | 10 | 166 | 454 | 94 | 397 | 1.97e-29 | 119 |
MS.gene84592.t1 | MTR_8g023240 | 22.984 | 496 | 307 | 12 | 1 | 455 | 29 | 490 | 1.40e-27 | 116 |
MS.gene84592.t1 | MTR_1g115440 | 31.727 | 249 | 148 | 7 | 1 | 238 | 1 | 238 | 1.24e-26 | 108 |
MS.gene84592.t1 | MTR_1g115440 | 30.222 | 225 | 117 | 4 | 263 | 448 | 10 | 233 | 8.60e-19 | 85.9 |
MS.gene84592.t1 | MTR_8g445860 | 30.242 | 248 | 147 | 8 | 4 | 239 | 5 | 238 | 1.87e-24 | 102 |
MS.gene84592.t1 | MTR_8g445860 | 30.876 | 217 | 113 | 6 | 267 | 447 | 16 | 231 | 1.09e-21 | 94.4 |
MS.gene84592.t1 | MTR_7g063850 | 31.532 | 222 | 110 | 6 | 267 | 454 | 69 | 282 | 7.84e-24 | 101 |
MS.gene84592.t1 | MTR_7g063850 | 23.887 | 247 | 151 | 8 | 15 | 246 | 69 | 293 | 1.82e-11 | 65.5 |
MS.gene84592.t1 | MTR_0150s0010 | 29.482 | 251 | 150 | 6 | 1 | 238 | 1 | 237 | 1.58e-21 | 93.6 |
MS.gene84592.t1 | MTR_0150s0010 | 29.333 | 225 | 119 | 3 | 262 | 447 | 8 | 231 | 2.53e-20 | 90.5 |
MS.gene84592.t1 | MTR_7g063690 | 28.269 | 283 | 126 | 7 | 13 | 291 | 13 | 222 | 1.63e-21 | 94.0 |
MS.gene84592.t1 | MTR_4g019330 | 33.898 | 177 | 83 | 4 | 278 | 450 | 32 | 178 | 4.46e-20 | 88.2 |
MS.gene84592.t1 | MTR_1g115455 | 26.295 | 251 | 148 | 9 | 6 | 239 | 3 | 233 | 9.82e-15 | 73.9 |
MS.gene84592.t1 | MTR_4g019240 | 34.677 | 124 | 65 | 5 | 3 | 116 | 4 | 121 | 3.96e-14 | 71.2 |
MS.gene84592.t1 | MTR_1g115450 | 36.842 | 95 | 55 | 1 | 7 | 101 | 2 | 91 | 4.11e-13 | 67.0 |
MS.gene84592.t1 | MTR_1g115470 | 39.362 | 94 | 52 | 1 | 12 | 105 | 6 | 94 | 4.82e-13 | 71.2 |
MS.gene84592.t1 | MTR_7g063760 | 48.485 | 66 | 33 | 1 | 390 | 454 | 2 | 67 | 1.07e-12 | 63.5 |
MS.gene84592.t1 | MTR_1g115435 | 24.681 | 235 | 147 | 7 | 7 | 239 | 2 | 208 | 6.58e-11 | 62.4 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene84592.t1 | AT3G09140 | 32.094 | 511 | 278 | 19 | 1 | 457 | 1 | 496 | 9.77e-60 | 204 |
MS.gene84592.t1 | AT5G01120 | 29.854 | 479 | 288 | 11 | 15 | 450 | 12 | 485 | 6.38e-58 | 199 |
MS.gene84592.t1 | AT3G09140 | 30.354 | 537 | 281 | 19 | 1 | 457 | 1 | 524 | 1.35e-55 | 194 |
MS.gene84592.t1 | AT5G43240 | 29.825 | 513 | 296 | 17 | 15 | 476 | 12 | 511 | 1.50e-55 | 193 |
MS.gene84592.t1 | AT5G43240 | 29.825 | 513 | 296 | 17 | 15 | 476 | 12 | 511 | 1.50e-55 | 193 |
MS.gene84592.t1 | AT5G43240 | 29.825 | 513 | 296 | 17 | 15 | 476 | 12 | 511 | 1.50e-55 | 193 |
MS.gene84592.t1 | AT5G01150 | 29.675 | 492 | 282 | 13 | 12 | 457 | 9 | 482 | 1.23e-54 | 191 |
MS.gene84592.t1 | AT5G01140 | 28.257 | 499 | 289 | 12 | 12 | 476 | 9 | 472 | 6.38e-52 | 182 |
MS.gene84592.t1 | AT5G01140 | 29.362 | 235 | 125 | 9 | 11 | 232 | 238 | 444 | 1.62e-13 | 72.8 |
MS.gene84592.t1 | AT5G01130 | 30.000 | 480 | 286 | 17 | 1 | 460 | 1 | 450 | 5.49e-50 | 177 |
MS.gene84592.t1 | AT3G09110 | 32.622 | 328 | 197 | 10 | 12 | 329 | 9 | 322 | 1.07e-48 | 171 |
MS.gene84592.t1 | AT3G09120 | 31.250 | 320 | 197 | 9 | 11 | 318 | 5 | 313 | 1.09e-39 | 145 |
MS.gene84592.t1 | AT5G37320 | 27.381 | 504 | 294 | 22 | 3 | 457 | 2 | 482 | 3.87e-37 | 142 |
MS.gene84592.t1 | AT5G43240 | 28.857 | 350 | 199 | 13 | 167 | 476 | 28 | 367 | 7.97e-28 | 114 |
Find 80 sgRNAs with CRISPR-Local
Find 241 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TCTTGCTTATGTTGATATTA+AGG | 0.164334 | 7.3:-39358186 | None:intergenic |
TAGAGCACCATTAACGTTTA+TGG | 0.174129 | 7.3:+39360943 | MS.gene84592:CDS |
CAATGTTCAGTTTCATATTC+TGG | 0.189480 | 7.3:-39357880 | None:intergenic |
GATCCTAAATCCCCTATTTC+TGG | 0.194829 | 7.3:+39360911 | MS.gene84592:CDS |
CCGACCTCCGATCTGTTTCT+TGG | 0.207965 | 7.3:-39360530 | None:intergenic |
GATTCCTTGTTACAATTATA+AGG | 0.220341 | 7.3:+39360862 | MS.gene84592:CDS |
CTAGCATATCCTCCAGAAAT+AGG | 0.222209 | 7.3:-39360923 | None:intergenic |
CCTCCAGAAATAGGGGATTT+AGG | 0.261981 | 7.3:-39360914 | None:intergenic |
CGGACTTTGAGAAAAGAAAT+TGG | 0.267457 | 7.3:+39358034 | MS.gene84592:CDS |
CAAAGTTATCATTAGAGTTT+TGG | 0.270973 | 7.3:+39357598 | MS.gene84592:CDS |
TAATCTTCTCAAATTGTCTT+TGG | 0.289830 | 7.3:+39360445 | MS.gene84592:CDS |
AAACTTGTTGTAACAACATT+TGG | 0.308352 | 7.3:-39358109 | None:intergenic |
TGTCATTGACTCCATGCTTC+TGG | 0.316064 | 7.3:-39358141 | None:intergenic |
CCGGCTGAGACTGAGTTTCT+TGG | 0.326408 | 7.3:-39357848 | None:intergenic |
AATACTGTGTAAGTTTCTTC+AGG | 0.340897 | 7.3:+39357966 | MS.gene84592:CDS |
TAGCATATCCTCCAGAAATA+GGG | 0.363628 | 7.3:-39360922 | None:intergenic |
GAGGAAATGGTCGTTAATAT+TGG | 0.365896 | 7.3:+39361052 | MS.gene84592:CDS |
TAAATTATCAATGCAGCTTA+AGG | 0.378298 | 7.3:-39360723 | None:intergenic |
AAATGCTTGGATTAGTTAGT+AGG | 0.380859 | 7.3:-39360805 | None:intergenic |
TTCTACCTTTGGCAACTTCA+AGG | 0.398271 | 7.3:-39361896 | None:intergenic |
AACAAGGAATCGGTAATATC+TGG | 0.406256 | 7.3:-39360850 | None:intergenic |
TCTGTCACCATAAACGTTAA+TGG | 0.410819 | 7.3:-39360950 | None:intergenic |
CGACCTCCGATCTGTTTCTT+GGG | 0.414289 | 7.3:-39360529 | None:intergenic |
AATATTGAAGCACTGAGCTT+TGG | 0.420564 | 7.3:+39357740 | MS.gene84592:CDS |
AGGGACCATTGCAAAATTTG+TGG | 0.425656 | 7.3:+39357706 | MS.gene84592:CDS |
AAGATATGAAATACCATCAA+TGG | 0.434003 | 7.3:-39360999 | None:intergenic |
GATGGCAAATTAACCTGATC+AGG | 0.436131 | 7.3:-39361862 | None:intergenic |
TCAAAATATGCGTTGACAAA+CGG | 0.437688 | 7.3:+39361203 | MS.gene84592:CDS |
TCTACCTTTGGCAACTTCAA+GGG | 0.437834 | 7.3:-39361895 | None:intergenic |
ACTTAATGATGTGGAGGAAA+TGG | 0.448325 | 7.3:+39361039 | MS.gene84592:CDS |
TTCAAGGGGCTAGCATTAGA+TGG | 0.450685 | 7.3:-39361880 | None:intergenic |
TCTATTTGCTGAGGCAGATA+AGG | 0.457603 | 7.3:+39357643 | MS.gene84592:CDS |
AAAGGAACAATGTGATGAAA+TGG | 0.461572 | 7.3:+39360565 | MS.gene84592:CDS |
TTATAATTGTAACAAGGAAT+CGG | 0.466064 | 7.3:-39360860 | None:intergenic |
GGTCGGGATCGGTGAAGAAA+AGG | 0.473742 | 7.3:+39360547 | MS.gene84592:CDS |
GGCAGGAAGTAGACCTGATC+AGG | 0.473977 | 7.3:+39361849 | MS.gene84592:intron |
TTAAATATGAAGTCTGACAT+AGG | 0.484007 | 7.3:-39360479 | None:intergenic |
CAAGAAACAGATCGGAGGTC+GGG | 0.485070 | 7.3:+39360531 | MS.gene84592:CDS |
CATATTCTGGCAATGAGCAC+CGG | 0.485366 | 7.3:-39357867 | None:intergenic |
AACAGATCGGAGGTCGGGAT+CGG | 0.492134 | 7.3:+39360536 | MS.gene84592:CDS |
ATTTCCTCCACATCATTAAG+TGG | 0.492887 | 7.3:-39361037 | None:intergenic |
AGGAATCAGAAATGTATTTG+TGG | 0.496267 | 7.3:+39357986 | MS.gene84592:CDS |
TCAGACTGCATGGAAATGCT+TGG | 0.498154 | 7.3:-39360818 | None:intergenic |
ATAATTACTAACCTATGTAC+TGG | 0.506330 | 7.3:-39361232 | None:intergenic |
TATCAACATAAGCAAGAAAG+AGG | 0.508368 | 7.3:+39358192 | MS.gene84592:CDS |
TTTGTCTACTTGTTCTGCTG+AGG | 0.512309 | 7.3:-39357579 | None:intergenic |
GATCTTGTTTATTGAAGCAG+AGG | 0.517035 | 7.3:+39360622 | MS.gene84592:CDS |
TTTCTCACCTTTCCCTTGGG+AGG | 0.518315 | 7.3:+39360671 | MS.gene84592:CDS |
CTACCTTTGGCAACTTCAAG+GGG | 0.528263 | 7.3:-39361894 | None:intergenic |
ACTCCAATGTCATCCATTGA+TGG | 0.546893 | 7.3:+39360986 | MS.gene84592:CDS |
ATGACATTGGAGTCACAACC+AGG | 0.561281 | 7.3:-39360976 | None:intergenic |
TTAAATCTCCTCCAGAAGCA+TGG | 0.561651 | 7.3:+39358130 | MS.gene84592:CDS |
CAACACTCCTCCCAAGGGAA+AGG | 0.566939 | 7.3:-39360678 | None:intergenic |
ACTAACCTATGTACTGGTTG+AGG | 0.571028 | 7.3:-39361226 | None:intergenic |
CCAAGAAACTCAGTCTCAGC+CGG | 0.572439 | 7.3:+39357848 | MS.gene84592:CDS |
AGCATATCCTCCAGAAATAG+GGG | 0.573043 | 7.3:-39360921 | None:intergenic |
CATATGCAACACTCCTCCCA+AGG | 0.586923 | 7.3:-39360684 | None:intergenic |
CTCGTCATCACAGCGGTAGT+AGG | 0.599159 | 7.3:-39357924 | None:intergenic |
GTTCGTGAGTTCAGACTGCA+TGG | 0.601730 | 7.3:-39360828 | None:intergenic |
AAATAAAGTTCTATTTGCTG+AGG | 0.602370 | 7.3:+39357634 | MS.gene84592:CDS |
CGTTAATATTGGCCAGAAGG+AGG | 0.604404 | 7.3:+39361063 | MS.gene84592:CDS |
ATACCATCAATGGATGACAT+TGG | 0.606080 | 7.3:-39360989 | None:intergenic |
GGTCGTTAATATTGGCCAGA+AGG | 0.607810 | 7.3:+39361060 | MS.gene84592:CDS |
TTTAGACCCAAGAAACAGAT+CGG | 0.608075 | 7.3:+39360523 | MS.gene84592:CDS |
GAACGTCCCACTTAATGATG+TGG | 0.609331 | 7.3:+39361030 | MS.gene84592:CDS |
CATTGACTCCATGCTTCTGG+AGG | 0.619328 | 7.3:-39358138 | None:intergenic |
CGTCCCACTTAATGATGTGG+AGG | 0.619494 | 7.3:+39361033 | MS.gene84592:CDS |
CCAAGAAACAGATCGGAGGT+CGG | 0.621418 | 7.3:+39360530 | MS.gene84592:CDS |
TTTCCTCCACATCATTAAGT+GGG | 0.624477 | 7.3:-39361036 | None:intergenic |
ATTTCCTTATAATTGTAACA+AGG | 0.626754 | 7.3:-39360866 | None:intergenic |
CCTAAATCCCCTATTTCTGG+AGG | 0.628731 | 7.3:+39360914 | MS.gene84592:CDS |
AACGGCCTCAACCAGTACAT+AGG | 0.634113 | 7.3:+39361221 | MS.gene84592:CDS |
GGAGTGTTGCATATGCTCGA+AGG | 0.640903 | 7.3:+39360692 | MS.gene84592:CDS |
ACAGCGGTAGTAGGACTGCA+AGG | 0.662142 | 7.3:-39357915 | None:intergenic |
TAGCCCCTTGAAGTTGCCAA+AGG | 0.663517 | 7.3:+39361891 | MS.gene84592:CDS |
ATATGCAACACTCCTCCCAA+GGG | 0.663884 | 7.3:-39360683 | None:intergenic |
GTTTATGGTGACAGATGACC+TGG | 0.700701 | 7.3:+39360958 | MS.gene84592:CDS |
TCTATGGTCACAGACATGCA+AGG | 0.703516 | 7.3:+39357811 | MS.gene84592:CDS |
AGACCCAAGAAACAGATCGG+AGG | 0.726967 | 7.3:+39360526 | MS.gene84592:CDS |
TGCAAGTCTCGTCATCACAG+CGG | 0.731505 | 7.3:-39357931 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AAAGAAAAAAACAATTATTT+AGG | - | chr7.3:39358372-39358391 | None:intergenic | 10.0% |
!! | ATAAATTAACATATATGTAA+CGG | + | chr7.3:39360201-39360220 | MS.gene84592:intron | 10.0% |
!! | ATTTGTTTATAAAACCATTA+AGG | + | chr7.3:39361521-39361540 | MS.gene84592:intron | 15.0% |
!!! | TCTTTTGATCTTTTAATATA+TGG | - | chr7.3:39359211-39359230 | None:intergenic | 15.0% |
!!! | TTTGTTATCTTTTAAATGTT+TGG | - | chr7.3:39358960-39358979 | None:intergenic | 15.0% |
!! | AAAACAATTATTTAGGAAAC+CGG | - | chr7.3:39358365-39358384 | None:intergenic | 20.0% |
!! | AAACAAGAGTTAAATATGTT+TGG | - | chr7.3:39361406-39361425 | None:intergenic | 20.0% |
!! | AGAAATGATTGTGATAATAT+TGG | - | chr7.3:39358875-39358894 | None:intergenic | 20.0% |
!! | AGGTAAAACTTCTATTTAAA+TGG | + | chr7.3:39359479-39359498 | MS.gene84592:intron | 20.0% |
!! | ATCTTGATGAAAAATATCTA+TGG | + | chr7.3:39357795-39357814 | MS.gene84592:CDS | 20.0% |
!! | ATGACATATTTGCATAATAT+TGG | + | chr7.3:39359968-39359987 | MS.gene84592:intron | 20.0% |
!! | ATGTAAAAATCTTACATCAA+CGG | - | chr7.3:39358603-39358622 | None:intergenic | 20.0% |
!! | ATTTCCTTATAATTGTAACA+AGG | - | chr7.3:39360869-39360888 | None:intergenic | 20.0% |
!! | CAAATATGTAAGTGAATTAA+TGG | - | chr7.3:39361506-39361525 | None:intergenic | 20.0% |
!! | GGTAAAACTTCTATTTAAAT+GGG | + | chr7.3:39359480-39359499 | MS.gene84592:intron | 20.0% |
!! | TAATAATAATCTATGATGCA+CGG | - | chr7.3:39360305-39360324 | None:intergenic | 20.0% |
!! | TAGAAAAAGAAAAGAAGTAA+AGG | + | chr7.3:39361687-39361706 | MS.gene84592:intron | 20.0% |
!! | TCAATATGAAAATAGTATGA+AGG | - | chr7.3:39361460-39361479 | None:intergenic | 20.0% |
!! | TTATAATTGTAACAAGGAAT+CGG | - | chr7.3:39360863-39360882 | None:intergenic | 20.0% |
!!! | AAATATGTCATTTATGCTTT+TGG | - | chr7.3:39359959-39359978 | None:intergenic | 20.0% |
!!! | AATATGTCATTTATGCTTTT+GGG | - | chr7.3:39359958-39359977 | None:intergenic | 20.0% |
!!! | ATTTGTTTTAGATATTTGTC+TGG | - | chr7.3:39358461-39358480 | None:intergenic | 20.0% |
!!! | TATATTTCATGTGTTAGTTT+AGG | - | chr7.3:39360035-39360054 | None:intergenic | 20.0% |
!!! | TTTGTTTTAGATATTTGTCT+GGG | - | chr7.3:39358460-39358479 | None:intergenic | 20.0% |
! | AACCGTAGATGAATTAATAA+AGG | + | chr7.3:39360074-39360093 | MS.gene84592:intron | 25.0% |
! | AACTTGAAGAATTTCGTTAT+TGG | - | chr7.3:39359784-39359803 | None:intergenic | 25.0% |
! | AAGATATGAAATACCATCAA+TGG | - | chr7.3:39361002-39361021 | None:intergenic | 25.0% |
! | AATCAAGAACTTAATGCTTT+CGG | - | chr7.3:39359028-39359047 | None:intergenic | 25.0% |
! | AATGAAAGGTAACCATAAAT+GGG | + | chr7.3:39361595-39361614 | MS.gene84592:intron | 25.0% |
! | ATAATTACTAACCTATGTAC+TGG | - | chr7.3:39361235-39361254 | None:intergenic | 25.0% |
! | ATATGTAACTCTTGTATCTA+TGG | - | chr7.3:39358509-39358528 | None:intergenic | 25.0% |
! | GACCTTTATTAATTCATCTA+CGG | - | chr7.3:39360079-39360098 | None:intergenic | 25.0% |
! | GAGTGATTAAAAATGAAAGT+TGG | + | chr7.3:39361366-39361385 | MS.gene84592:intron | 25.0% |
! | GATTCCTTGTTACAATTATA+AGG | + | chr7.3:39360862-39360881 | MS.gene84592:CDS | 25.0% |
! | TAAATTATCAATGCAGCTTA+AGG | - | chr7.3:39360726-39360745 | None:intergenic | 25.0% |
! | TAATCTTCTCAAATTGTCTT+TGG | + | chr7.3:39360445-39360464 | MS.gene84592:CDS | 25.0% |
! | TAATGAAAGGTAACCATAAA+TGG | + | chr7.3:39361594-39361613 | MS.gene84592:intron | 25.0% |
! | TAGAAATAACGATATCACTT+TGG | - | chr7.3:39358914-39358933 | None:intergenic | 25.0% |
! | TCTTGCTTATGTTGATATTA+AGG | - | chr7.3:39358189-39358208 | None:intergenic | 25.0% |
! | TGATTATTATCTATGAAGCA+CGG | + | chr7.3:39358255-39358274 | MS.gene84592:intron | 25.0% |
! | TGTACATGCACATATAATAA+AGG | - | chr7.3:39361828-39361847 | None:intergenic | 25.0% |
! | TGTTTATAAAACCATTAAGG+AGG | + | chr7.3:39361524-39361543 | MS.gene84592:intron | 25.0% |
! | TTAAATATGAAGTCTGACAT+AGG | - | chr7.3:39360482-39360501 | None:intergenic | 25.0% |
! | TTATAGAGACTAAACTTTGA+TGG | + | chr7.3:39361335-39361354 | MS.gene84592:intron | 25.0% |
! | TTATTATATGTGCATGTACA+TGG | + | chr7.3:39361828-39361847 | MS.gene84592:intron | 25.0% |
! | TTCACAATAGTTCACATTAA+GGG | + | chr7.3:39358695-39358714 | MS.gene84592:intron | 25.0% |
! | TTCCTTGAAAATGTAATGAA+AGG | + | chr7.3:39361581-39361600 | MS.gene84592:intron | 25.0% |
! | TTTACACGTGAGTATAATAT+AGG | + | chr7.3:39358635-39358654 | MS.gene84592:intron | 25.0% |
! | TTTCACAATAGTTCACATTA+AGG | + | chr7.3:39358694-39358713 | MS.gene84592:intron | 25.0% |
!! | AAATAAAGTTCTATTTGCTG+AGG | + | chr7.3:39357634-39357653 | MS.gene84592:CDS | 25.0% |
!! | CAAAGTTATCATTAGAGTTT+TGG | + | chr7.3:39357598-39357617 | MS.gene84592:CDS | 25.0% |
!! | CTTAAATCTCTGATTTGAAT+AGG | + | chr7.3:39360418-39360437 | MS.gene84592:intron | 25.0% |
!! | TACCTTTCATTACATTTTCA+AGG | - | chr7.3:39361586-39361605 | None:intergenic | 25.0% |
!! | TGAACTTTTGCTAAAAAGAA+AGG | + | chr7.3:39361290-39361309 | MS.gene84592:intron | 25.0% |
!!! | AAACTTGTTGTAACAACATT+TGG | - | chr7.3:39358112-39358131 | None:intergenic | 25.0% |
!!! | ATGAAAGTTGGTATATTTAG+TGG | + | chr7.3:39361378-39361397 | MS.gene84592:intron | 25.0% |
!!! | TCCTATGTTTTTTACATTAG+CGG | + | chr7.3:39360232-39360251 | MS.gene84592:intron | 25.0% |
!!! | TGAAAGTTGGTATATTTAGT+GGG | + | chr7.3:39361379-39361398 | MS.gene84592:intron | 25.0% |
!!! | TTGTTTTGCAAGATTATCTA+TGG | - | chr7.3:39360000-39360019 | None:intergenic | 25.0% |
AAAGATTAACAAACGTGTCA+AGG | + | chr7.3:39359061-39359080 | MS.gene84592:intron | 30.0% | |
AAAGGAACAATGTGATGAAA+TGG | + | chr7.3:39360565-39360584 | MS.gene84592:CDS | 30.0% | |
AAGATTAACAAACGTGTCAA+GGG | + | chr7.3:39359062-39359081 | MS.gene84592:intron | 30.0% | |
AATACTGTGTAAGTTTCTTC+AGG | + | chr7.3:39357966-39357985 | MS.gene84592:CDS | 30.0% | |
AATAGTTCACATTAAGGGTT+TGG | + | chr7.3:39358700-39358719 | MS.gene84592:intron | 30.0% | |
AATGCTTTCGGACATTTAAT+CGG | - | chr7.3:39359016-39359035 | None:intergenic | 30.0% | |
ACCGCTAATGTAAAAAACAT+AGG | - | chr7.3:39360236-39360255 | None:intergenic | 30.0% | |
AGGAATCAGAAATGTATTTG+TGG | + | chr7.3:39357986-39358005 | MS.gene84592:CDS | 30.0% | |
ATAGTTCACATTAAGGGTTT+GGG | + | chr7.3:39358701-39358720 | MS.gene84592:intron | 30.0% | |
ATGTCTATGTAAACTATGCA+AGG | + | chr7.3:39359287-39359306 | MS.gene84592:intron | 30.0% | |
CAAAGAGATTCTAGATGATT+TGG | - | chr7.3:39359139-39359158 | None:intergenic | 30.0% | |
CAACCACAAGAAATCAAATA+TGG | - | chr7.3:39361150-39361169 | None:intergenic | 30.0% | |
CAATGTTCAGTTTCATATTC+TGG | - | chr7.3:39357883-39357902 | None:intergenic | 30.0% | |
CAGTAATTTATCCTCCTTAA+TGG | - | chr7.3:39361538-39361557 | None:intergenic | 30.0% | |
TAACATATATGTAACGGTGT+CGG | + | chr7.3:39360207-39360226 | MS.gene84592:intron | 30.0% | |
TATCAACATAAGCAAGAAAG+AGG | + | chr7.3:39358192-39358211 | MS.gene84592:CDS | 30.0% | |
TATTTCGCTATTAGCGAAAT+TGG | - | chr7.3:39359516-39359535 | None:intergenic | 30.0% | |
TCATATGAACATCCCATTTA+TGG | - | chr7.3:39361610-39361629 | None:intergenic | 30.0% | |
TGTCTATGTAAACTATGCAA+GGG | + | chr7.3:39359288-39359307 | MS.gene84592:intron | 30.0% | |
! | AATTTCTTTTCTCAAAGTCC+GGG | - | chr7.3:39358035-39358054 | None:intergenic | 30.0% |
! | AGCTTCTTAACATTTTGCTT+AGG | + | chr7.3:39357686-39357705 | MS.gene84592:CDS | 30.0% |
! | ATTAGCCACAAATTTTGCAA+TGG | - | chr7.3:39357714-39357733 | None:intergenic | 30.0% |
! | CAATTTCTTTTCTCAAAGTC+CGG | - | chr7.3:39358036-39358055 | None:intergenic | 30.0% |
! | GCTTCTTAACATTTTGCTTA+GGG | + | chr7.3:39357687-39357706 | MS.gene84592:CDS | 30.0% |
! | TCAAAATATGCGTTGACAAA+CGG | + | chr7.3:39361203-39361222 | MS.gene84592:CDS | 30.0% |
! | TCACCATATTTGATTTCTTG+TGG | + | chr7.3:39361144-39361163 | MS.gene84592:intron | 30.0% |
! | TGTATTTTCCTGCACAAAAA+GGG | + | chr7.3:39359922-39359941 | MS.gene84592:intron | 30.0% |
! | TTGTATTTTCCTGCACAAAA+AGG | + | chr7.3:39359921-39359940 | MS.gene84592:intron | 30.0% |
!! | AAATGCTTGGATTAGTTAGT+AGG | - | chr7.3:39360808-39360827 | None:intergenic | 30.0% |
!! | AGTTATCATTAGAGTTTTGG+TGG | + | chr7.3:39357601-39357620 | MS.gene84592:CDS | 30.0% |
AAACACAAAGCAAGTGGTTT+AGG | - | chr7.3:39359382-39359401 | None:intergenic | 35.0% | |
AACAAGGAATCGGTAATATC+TGG | - | chr7.3:39360853-39360872 | None:intergenic | 35.0% | |
AATATAGGATCGTTTCCACA+GGG | + | chr7.3:39358650-39358669 | MS.gene84592:intron | 35.0% | |
ACTTAATGATGTGGAGGAAA+TGG | + | chr7.3:39361039-39361058 | MS.gene84592:CDS | 35.0% | |
AGATAGAACTATTTCGCTTG+CGG | + | chr7.3:39358783-39358802 | MS.gene84592:intron | 35.0% | |
AGGAAGAAAGAATGAACGAA+AGG | + | chr7.3:39361707-39361726 | MS.gene84592:intron | 35.0% | |
ATACCATCAATGGATGACAT+TGG | - | chr7.3:39360992-39361011 | None:intergenic | 35.0% | |
ATTTCCTCCACATCATTAAG+TGG | - | chr7.3:39361040-39361059 | None:intergenic | 35.0% | |
CATATGATCTAAGGGTAATG+AGG | + | chr7.3:39361623-39361642 | MS.gene84592:intron | 35.0% | |
CATCTACTCTTGTAGTATTG+AGG | - | chr7.3:39359257-39359276 | None:intergenic | 35.0% | |
GAGGAAATGGTCGTTAATAT+TGG | + | chr7.3:39361052-39361071 | MS.gene84592:CDS | 35.0% | |
GGGATGTTCATATGATCTAA+GGG | + | chr7.3:39361615-39361634 | MS.gene84592:intron | 35.0% | |
TAATATAGGATCGTTTCCAC+AGG | + | chr7.3:39358649-39358668 | MS.gene84592:intron | 35.0% | |
TAGCATATCCTCCAGAAATA+GGG | - | chr7.3:39360925-39360944 | None:intergenic | 35.0% | |
TCGATGTCTCAATGAATCTA+GGG | + | chr7.3:39359345-39359364 | MS.gene84592:intron | 35.0% | |
TCTGTCACCATAAACGTTAA+TGG | - | chr7.3:39360953-39360972 | None:intergenic | 35.0% | |
TGAGCACAGAAAAATGCTTA+AGG | + | chr7.3:39360765-39360784 | MS.gene84592:CDS | 35.0% | |
TGGGATGTTCATATGATCTA+AGG | + | chr7.3:39361614-39361633 | MS.gene84592:intron | 35.0% | |
TTTAGACCCAAGAAACAGAT+CGG | + | chr7.3:39360523-39360542 | MS.gene84592:CDS | 35.0% | |
TTTCCTCCACATCATTAAGT+GGG | - | chr7.3:39361039-39361058 | None:intergenic | 35.0% | |
TTTCGGACATTTAATCGGTT+GGG | - | chr7.3:39359011-39359030 | None:intergenic | 35.0% | |
! | AAATTCTTCAAGTTTGCTCC+TGG | + | chr7.3:39359790-39359809 | MS.gene84592:intron | 35.0% |
! | ATTTGATTTCTTGTGGTTGC+AGG | + | chr7.3:39361151-39361170 | MS.gene84592:intron | 35.0% |
! | CGGACTTTGAGAAAAGAAAT+TGG | + | chr7.3:39358034-39358053 | MS.gene84592:CDS | 35.0% |
! | GATCTTGTTTATTGAAGCAG+AGG | + | chr7.3:39360622-39360641 | MS.gene84592:CDS | 35.0% |
! | GTTTGTCAACGCATATTTTG+AGG | - | chr7.3:39361204-39361223 | None:intergenic | 35.0% |
! | TAGAAGTTTTACCTCTCTCT+TGG | - | chr7.3:39359473-39359492 | None:intergenic | 35.0% |
! | TAGAGCACCATTAACGTTTA+TGG | + | chr7.3:39360943-39360962 | MS.gene84592:CDS | 35.0% |
! | TTATTCTACCCTTTTTGTGC+AGG | - | chr7.3:39359933-39359952 | None:intergenic | 35.0% |
! | TTTGATTTCTTGTGGTTGCA+GGG | + | chr7.3:39361152-39361171 | MS.gene84592:intron | 35.0% |
! | TTTTCTGCATACTTAGAGAG+AGG | - | chr7.3:39359427-39359446 | None:intergenic | 35.0% |
!! | AATATTGAAGCACTGAGCTT+TGG | + | chr7.3:39357740-39357759 | MS.gene84592:CDS | 35.0% |
AAAGAGAGTGAGAGTCATGA+AGG | + | chr7.3:39361738-39361757 | MS.gene84592:intron | 40.0% | |
AAGAGAGTGAGAGTCATGAA+GGG | + | chr7.3:39361739-39361758 | MS.gene84592:intron | 40.0% | |
AATAGCGTAGATTTCGCTGA+TGG | + | chr7.3:39359668-39359687 | MS.gene84592:intron | 40.0% | |
ACTACGCTATTAGCGTAGTT+TGG | - | chr7.3:39359629-39359648 | None:intergenic | 40.0% | |
ACTCCAATGTCATCCATTGA+TGG | + | chr7.3:39360986-39361005 | MS.gene84592:CDS | 40.0% | |
ACTCTTGTATCTATGGTGTG+CGG | - | chr7.3:39358502-39358521 | None:intergenic | 40.0% | |
AGAATGAACGAAAGGTGAGA+AGG | + | chr7.3:39361715-39361734 | MS.gene84592:intron | 40.0% | |
AGAGAGAAACACAAAGCAAG+TGG | - | chr7.3:39359388-39359407 | None:intergenic | 40.0% | |
AGCATATCCTCCAGAAATAG+GGG | - | chr7.3:39360924-39360943 | None:intergenic | 40.0% | |
AGGGACCATTGCAAAATTTG+TGG | + | chr7.3:39357706-39357725 | MS.gene84592:CDS | 40.0% | |
ATCTAAGGGTAATGAGGAGT+AGG | + | chr7.3:39361629-39361648 | MS.gene84592:intron | 40.0% | |
CGATATCACTTTGGACATGA+AGG | - | chr7.3:39358905-39358924 | None:intergenic | 40.0% | |
CTACGCTATTAGCGTAGTTT+GGG | - | chr7.3:39359628-39359647 | None:intergenic | 40.0% | |
CTAGATTCATTGAGACATCG+AGG | - | chr7.3:39359346-39359365 | None:intergenic | 40.0% | |
CTAGCATATCCTCCAGAAAT+AGG | - | chr7.3:39360926-39360945 | None:intergenic | 40.0% | |
CTATTAGCGTAAAAGCTCCA+GGG | - | chr7.3:39359653-39359672 | None:intergenic | 40.0% | |
CTCGATGTCTCAATGAATCT+AGG | + | chr7.3:39359344-39359363 | MS.gene84592:intron | 40.0% | |
CTTTCGGACATTTAATCGGT+TGG | - | chr7.3:39359012-39359031 | None:intergenic | 40.0% | |
GATCCTAAATCCCCTATTTC+TGG | + | chr7.3:39360911-39360930 | MS.gene84592:CDS | 40.0% | |
GATGGCAAATTAACCTGATC+AGG | - | chr7.3:39361865-39361884 | None:intergenic | 40.0% | |
GCGAAAACTCATGAAGAACA+GGG | - | chr7.3:39359606-39359625 | None:intergenic | 40.0% | |
GTAAACTATGCAAGGGATGA+AGG | + | chr7.3:39359295-39359314 | MS.gene84592:intron | 40.0% | |
TATATGTGCATGTACATGGC+AGG | + | chr7.3:39361832-39361851 | MS.gene84592:intron | 40.0% | |
TATTAGCGTAAAAGCTCCAG+GGG | - | chr7.3:39359652-39359671 | None:intergenic | 40.0% | |
TCTACCTTTGGCAACTTCAA+GGG | - | chr7.3:39361898-39361917 | None:intergenic | 40.0% | |
TGTGCAGGAAAATACAAGCA+AGG | - | chr7.3:39359918-39359937 | None:intergenic | 40.0% | |
TGTTGAACCGAGAAAAAACC+CGG | + | chr7.3:39358014-39358033 | MS.gene84592:CDS | 40.0% | |
TTAAATCTCCTCCAGAAGCA+TGG | + | chr7.3:39358130-39358149 | MS.gene84592:CDS | 40.0% | |
TTCTACCTTTGGCAACTTCA+AGG | - | chr7.3:39361899-39361918 | None:intergenic | 40.0% | |
TTTGTCTACTTGTTCTGCTG+AGG | - | chr7.3:39357582-39357601 | None:intergenic | 40.0% | |
! | AGTTTTCTCACCTTTCCCTT+GGG | + | chr7.3:39360668-39360687 | MS.gene84592:CDS | 40.0% |
! | TAGTTTTCTCACCTTTCCCT+TGG | + | chr7.3:39360667-39360686 | MS.gene84592:CDS | 40.0% |
! | TCTATTTGCTGAGGCAGATA+AGG | + | chr7.3:39357643-39357662 | MS.gene84592:CDS | 40.0% |
!! | ACTAACCTATGTACTGGTTG+AGG | - | chr7.3:39361229-39361248 | None:intergenic | 40.0% |
!! | TTTTTACATTAGCGGTGTCG+CGG | + | chr7.3:39360240-39360259 | MS.gene84592:intron | 40.0% |
!!! | TCAAAGTCCGGGTTTTTTCT+CGG | - | chr7.3:39358024-39358043 | None:intergenic | 40.0% |
AGCTCGTATGAGTGTTACAC+AGG | - | chr7.3:39358426-39358445 | None:intergenic | 45.0% | |
AGTTACGCTATCAGCGTAAC+TGG | - | chr7.3:39359823-39359842 | None:intergenic | 45.0% | |
ATATGCAACACTCCTCCCAA+GGG | - | chr7.3:39360686-39360705 | None:intergenic | 45.0% | |
ATGACATTGGAGTCACAACC+AGG | - | chr7.3:39360979-39360998 | None:intergenic | 45.0% | |
ATGATGCACGGATTCTGACA+CGG | - | chr7.3:39360293-39360312 | None:intergenic | 45.0% | |
ATGATTGAAGCAACTCCCTG+TGG | - | chr7.3:39358668-39358687 | None:intergenic | 45.0% | |
ATTGGCCAGAAGGAGGTAAA+AGG | + | chr7.3:39361070-39361089 | MS.gene84592:intron | 45.0% | |
CAGTGAATAGTCCAAGAGAG+AGG | + | chr7.3:39359459-39359478 | MS.gene84592:intron | 45.0% | |
CATATTCTGGCAATGAGCAC+CGG | - | chr7.3:39357870-39357889 | None:intergenic | 45.0% | |
CATTGAGACATCGAGGATCT+TGG | - | chr7.3:39359339-39359358 | None:intergenic | 45.0% | |
CCTCCAGAAATAGGGGATTT+AGG | - | chr7.3:39360917-39360936 | None:intergenic | 45.0% | |
CGTTAATATTGGCCAGAAGG+AGG | + | chr7.3:39361063-39361082 | MS.gene84592:CDS | 45.0% | |
CTACCTTTGGCAACTTCAAG+GGG | - | chr7.3:39361897-39361916 | None:intergenic | 45.0% | |
GAACGTCCCACTTAATGATG+TGG | + | chr7.3:39361030-39361049 | MS.gene84592:CDS | 45.0% | |
GCTATTAGCGTAAAAGCTCC+AGG | - | chr7.3:39359654-39359673 | None:intergenic | 45.0% | |
GGCGAAAACTCATGAAGAAC+AGG | - | chr7.3:39359607-39359626 | None:intergenic | 45.0% | |
GGTCGTTAATATTGGCCAGA+AGG | + | chr7.3:39361060-39361079 | MS.gene84592:CDS | 45.0% | |
GTTACGCTATCAGCGTAACT+GGG | - | chr7.3:39359822-39359841 | None:intergenic | 45.0% | |
GTTTATGGTGACAGATGACC+TGG | + | chr7.3:39360958-39360977 | MS.gene84592:CDS | 45.0% | |
TACTTCGACACTCCTACGAT+CGG | + | chr7.3:39358391-39358410 | MS.gene84592:intron | 45.0% | |
TCAGACTGCATGGAAATGCT+TGG | - | chr7.3:39360821-39360840 | None:intergenic | 45.0% | |
TCGCTATTAGCGAAGCATGT+CGG | + | chr7.3:39359537-39359556 | MS.gene84592:intron | 45.0% | |
TCTATGGTCACAGACATGCA+AGG | + | chr7.3:39357811-39357830 | MS.gene84592:CDS | 45.0% | |
TTACGCTATCAGCGTAACTG+GGG | - | chr7.3:39359821-39359840 | None:intergenic | 45.0% | |
TTGGCCAGAAGGAGGTAAAA+GGG | + | chr7.3:39361071-39361090 | MS.gene84592:intron | 45.0% | |
! | TTCAAGGGGCTAGCATTAGA+TGG | - | chr7.3:39361883-39361902 | None:intergenic | 45.0% |
!! | CCTAAATCCCCTATTTCTGG+AGG | + | chr7.3:39360914-39360933 | MS.gene84592:CDS | 45.0% |
!! | TGTCATTGACTCCATGCTTC+TGG | - | chr7.3:39358144-39358163 | None:intergenic | 45.0% |
AACGGCCTCAACCAGTACAT+AGG | + | chr7.3:39361221-39361240 | MS.gene84592:CDS | 50.0% | |
AGACCCAAGAAACAGATCGG+AGG | + | chr7.3:39360526-39360545 | MS.gene84592:CDS | 50.0% | |
CAAGAAACAGATCGGAGGTC+GGG | + | chr7.3:39360531-39360550 | MS.gene84592:CDS | 50.0% | |
CATATGCAACACTCCTCCCA+AGG | - | chr7.3:39360687-39360706 | None:intergenic | 50.0% | |
CCAAGAAACAGATCGGAGGT+CGG | + | chr7.3:39360530-39360549 | MS.gene84592:CDS | 50.0% | |
CCAAGAAACTCAGTCTCAGC+CGG | + | chr7.3:39357848-39357867 | MS.gene84592:CDS | 50.0% | |
CGTCCCACTTAATGATGTGG+AGG | + | chr7.3:39361033-39361052 | MS.gene84592:CDS | 50.0% | |
CTCATGAAGAACAGGGCACA+AGG | - | chr7.3:39359599-39359618 | None:intergenic | 50.0% | |
GAGATTGCTGCTGTTACGCT+TGG | - | chr7.3:39358822-39358841 | None:intergenic | 50.0% | |
GATGGCGACTTTCTTCAAGG+CGG | + | chr7.3:39359686-39359705 | MS.gene84592:intron | 50.0% | |
GTTACGCCATCAGCGAAATC+TGG | - | chr7.3:39359726-39359745 | None:intergenic | 50.0% | |
GTTCGTGAGTTCAGACTGCA+TGG | - | chr7.3:39360831-39360850 | None:intergenic | 50.0% | |
TAGCCCCTTGAAGTTGCCAA+AGG | + | chr7.3:39361891-39361910 | MS.gene84592:CDS | 50.0% | |
TATGAAGCACGGACACCTCT+AGG | + | chr7.3:39358266-39358285 | MS.gene84592:intron | 50.0% | |
TGCAAGTCTCGTCATCACAG+CGG | - | chr7.3:39357934-39357953 | None:intergenic | 50.0% | |
TTCGCTCCAGATTTCGCTGA+TGG | + | chr7.3:39359717-39359736 | MS.gene84592:intron | 50.0% | |
TTTCTCACCTTTCCCTTGGG+AGG | + | chr7.3:39360671-39360690 | MS.gene84592:CDS | 50.0% | |
! | ACGCTGATAGCGTAACTCTC+TGG | + | chr7.3:39359826-39359845 | MS.gene84592:intron | 50.0% |
! | ATGTGTCGTACGGGTGTCAT+AGG | - | chr7.3:39358336-39358355 | None:intergenic | 50.0% |
! | CACTCCCTTTTACCTCCTTC+TGG | - | chr7.3:39361078-39361097 | None:intergenic | 50.0% |
! | CGACCTCCGATCTGTTTCTT+GGG | - | chr7.3:39360532-39360551 | None:intergenic | 50.0% |
! | GCTGATGGCGACTTTCTTCA+AGG | + | chr7.3:39359683-39359702 | MS.gene84592:intron | 50.0% |
!! | AAGCATGTCGGCTTAAGTGG+TGG | + | chr7.3:39359549-39359568 | MS.gene84592:intron | 50.0% |
!! | CATTGACTCCATGCTTCTGG+AGG | - | chr7.3:39358141-39358160 | None:intergenic | 50.0% |
!! | GGAGTGTTGCATATGCTCGA+AGG | + | chr7.3:39360692-39360711 | MS.gene84592:CDS | 50.0% |
AACAGATCGGAGGTCGGGAT+CGG | + | chr7.3:39360536-39360555 | MS.gene84592:CDS | 55.0% | |
ACAGCGGTAGTAGGACTGCA+AGG | - | chr7.3:39357918-39357937 | None:intergenic | 55.0% | |
ACGCTAATAGCGTAGTCCCC+TGG | + | chr7.3:39359633-39359652 | MS.gene84592:intron | 55.0% | |
AGGTGTCAGACACCGATCGT+AGG | - | chr7.3:39358406-39358425 | None:intergenic | 55.0% | |
CAACACTCCTCCCAAGGGAA+AGG | - | chr7.3:39360681-39360700 | None:intergenic | 55.0% | |
CCAACGTGGCATAACCCCAT+TGG | - | chr7.3:39359575-39359594 | None:intergenic | 55.0% | |
CCAATGGGGTTATGCCACGT+TGG | + | chr7.3:39359572-39359591 | MS.gene84592:intron | 55.0% | |
CCGGCTGAGACTGAGTTTCT+TGG | - | chr7.3:39357851-39357870 | None:intergenic | 55.0% | |
CCGTACGACACATGTCGAAC+CGG | + | chr7.3:39358343-39358362 | MS.gene84592:intron | 55.0% | |
CGGCTTAAGTGGTGGCCAAT+GGG | + | chr7.3:39359557-39359576 | MS.gene84592:intron | 55.0% | |
CGGTTCGACATGTGTCGTAC+GGG | - | chr7.3:39358345-39358364 | None:intergenic | 55.0% | |
CTCGTCATCACAGCGGTAGT+AGG | - | chr7.3:39357927-39357946 | None:intergenic | 55.0% | |
GGCAGGAAGTAGACCTGATC+AGG | + | chr7.3:39361849-39361868 | MS.gene84592:intron | 55.0% | |
GGCTTAAGTGGTGGCCAATG+GGG | + | chr7.3:39359558-39359577 | MS.gene84592:intron | 55.0% | |
GGTCGGGATCGGTGAAGAAA+AGG | + | chr7.3:39360547-39360566 | MS.gene84592:CDS | 55.0% | |
TCGGCTTAAGTGGTGGCCAA+TGG | + | chr7.3:39359556-39359575 | MS.gene84592:intron | 55.0% | |
! | CCGACCTCCGATCTGTTTCT+TGG | - | chr7.3:39360533-39360552 | None:intergenic | 55.0% |
! | CCGGTTCGACATGTGTCGTA+CGG | - | chr7.3:39358346-39358365 | None:intergenic | 55.0% |
! | TCGCTGATGGCGTAACTGTC+TGG | + | chr7.3:39359730-39359749 | MS.gene84592:intron | 55.0% |
!! | GCGAAGCATGTCGGCTTAAG+TGG | + | chr7.3:39359546-39359565 | MS.gene84592:intron | 55.0% |
ACAGGGCACAAGGACCAACG+TGG | - | chr7.3:39359589-39359608 | None:intergenic | 60.0% | |
CACCGCGACACGACACGATA+CGG | - | chr7.3:39360269-39360288 | None:intergenic | 60.0% | |
CAGGACACGCCTAGTCCTAG+AGG | - | chr7.3:39358284-39358303 | None:intergenic | 60.0% | |
CTATCAGCGTAACTGGGGCG+AGG | - | chr7.3:39359816-39359835 | None:intergenic | 60.0% | |
GTCCGTATCGTGTCGTGTCG+CGG | + | chr7.3:39360264-39360283 | MS.gene84592:intron | 60.0% | |
TGTCAGACACCGACGCGTGT+CGG | - | chr7.3:39358311-39358330 | None:intergenic | 60.0% | |
!! | CTCTAGGACTAGGCGTGTCC+TGG | + | chr7.3:39358282-39358301 | MS.gene84592:intron | 60.0% |
!! | GCACGGACACCTCTAGGACT+AGG | + | chr7.3:39358272-39358291 | MS.gene84592:intron | 60.0% |
TCCTGGTGTCCGACACGCGT+CGG | + | chr7.3:39358299-39358318 | MS.gene84592:intron | 65.0% | |
ACCGACGCGTGTCGGACACC+AGG | - | chr7.3:39358303-39358322 | None:intergenic | 70.0% | |
AGCGTAACTGGGGCGAGGCC+AGG | - | chr7.3:39359811-39359830 | None:intergenic | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr7.3 | gene | 39357566 | 39361924 | 39357566 | ID=MS.gene84592 |
chr7.3 | mRNA | 39357566 | 39361924 | 39357566 | ID=MS.gene84592.t1;Parent=MS.gene84592 |
chr7.3 | exon | 39357566 | 39358213 | 39357566 | ID=MS.gene84592.t1.exon1;Parent=MS.gene84592.t1 |
chr7.3 | CDS | 39357566 | 39358213 | 39357566 | ID=cds.MS.gene84592.t1;Parent=MS.gene84592.t1 |
chr7.3 | exon | 39360440 | 39361084 | 39360440 | ID=MS.gene84592.t1.exon2;Parent=MS.gene84592.t1 |
chr7.3 | CDS | 39360440 | 39361084 | 39360440 | ID=cds.MS.gene84592.t1;Parent=MS.gene84592.t1 |
chr7.3 | exon | 39361173 | 39361242 | 39361173 | ID=MS.gene84592.t1.exon3;Parent=MS.gene84592.t1 |
chr7.3 | CDS | 39361173 | 39361242 | 39361173 | ID=cds.MS.gene84592.t1;Parent=MS.gene84592.t1 |
chr7.3 | exon | 39361854 | 39361924 | 39361854 | ID=MS.gene84592.t1.exon4;Parent=MS.gene84592.t1 |
chr7.3 | CDS | 39361854 | 39361924 | 39361854 | ID=cds.MS.gene84592.t1;Parent=MS.gene84592.t1 |
Gene Sequence |
Protein sequence |