AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene73263

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene73263.t1 MTR_4g019340 79.356 528 64 5 7 516 3 503 0.0 814
MS.gene73263.t1 MTR_4g017830 75.139 539 120 5 16 552 1 527 0.0 794
MS.gene73263.t1 MTR_4g017410 66.412 524 141 9 16 535 1 493 0.0 655
MS.gene73263.t1 MTR_4g017440 66.925 517 150 7 19 530 6 506 0.0 652
MS.gene73263.t1 MTR_4g017470 61.714 525 150 7 16 535 1 479 0.0 593
MS.gene73263.t1 MTR_4g017550 65.618 477 139 10 54 526 18 473 0.0 576
MS.gene73263.t1 MTR_4g017550 28.832 274 143 11 5 260 230 469 1.04e-11 67.8
MS.gene73263.t1 MTR_4g017610 59.136 509 173 9 15 522 1 475 0.0 567
MS.gene73263.t1 MTR_4g019310 41.874 523 252 13 15 522 1 486 1.14e-120 365
MS.gene73263.t1 MTR_7g066340 34.328 536 266 14 16 537 1 464 4.45e-81 262
MS.gene73263.t1 MTR_7g066260 33.333 540 278 14 20 544 8 480 6.98e-79 256
MS.gene73263.t1 MTR_7g066570 35.075 536 265 16 20 530 7 484 1.91e-78 258
MS.gene73263.t1 MTR_7g066410 34.201 538 279 17 28 526 11 512 3.13e-76 250
MS.gene73263.t1 MTR_7g066350 34.113 513 253 13 23 522 5 445 4.06e-76 248
MS.gene73263.t1 MTR_7g066430 35.619 525 272 15 28 528 5 487 7.57e-76 249
MS.gene73263.t1 MTR_7g058710 31.028 535 299 11 16 532 1 483 1.63e-73 242
MS.gene73263.t1 MTR_1g041315 33.143 525 247 17 16 510 1 451 1.95e-70 234
MS.gene73263.t1 MTR_7g066400 32.500 520 251 13 16 522 1 433 1.64e-68 228
MS.gene73263.t1 MTR_7g012680 34.457 534 246 18 16 530 1 449 9.02e-68 226
MS.gene73263.t1 MTR_7g066360 33.091 550 278 14 17 553 4 476 5.69e-66 222
MS.gene73263.t1 MTR_7g062280 33.824 544 280 18 16 532 1 491 9.06e-65 219
MS.gene73263.t1 MTR_7g063880 31.670 521 287 17 16 526 1 462 3.36e-61 209
MS.gene73263.t1 MTR_7g063660 32.075 530 273 16 28 532 10 477 1.27e-60 208
MS.gene73263.t1 MTR_7g062300 32.696 523 288 16 16 525 1 472 2.28e-60 207
MS.gene73263.t1 MTR_7g063900 32.397 534 286 16 16 526 1 482 1.07e-59 206
MS.gene73263.t1 MTR_7g066580 31.792 519 247 16 33 524 1 439 6.22e-59 202
MS.gene73263.t1 MTR_7g063840 31.418 522 294 16 22 532 5 473 3.20e-57 199
MS.gene73263.t1 MTR_7g066310 30.326 521 218 14 28 537 8 394 3.83e-57 197
MS.gene73263.t1 MTR_7g066290 35.696 381 202 11 18 380 6 361 1.06e-56 196
MS.gene73263.t1 MTR_7g063890 32.325 529 283 18 21 526 22 498 1.28e-54 192
MS.gene73263.t1 MTR_4g019240 75.806 124 25 4 16 137 1 121 6.43e-52 176
MS.gene73263.t1 MTR_4g019240 81.429 70 13 0 484 553 112 181 6.25e-26 105
MS.gene73263.t1 MTR_7g063920 29.367 521 279 14 16 532 1 436 1.48e-51 182
MS.gene73263.t1 MTR_7g063820 31.471 537 295 15 16 532 1 484 2.11e-50 181
MS.gene73263.t1 MTR_7g063830 32.750 400 220 12 23 405 6 373 5.64e-49 176
MS.gene73263.t1 MTR_7g063670 30.228 526 274 18 21 532 11 457 1.14e-46 170
MS.gene73263.t1 MTR_3g065200 28.800 500 261 16 28 520 4 415 1.71e-43 161
MS.gene73263.t1 MTR_7g066480 34.121 381 213 12 28 397 17 370 3.13e-42 157
MS.gene73263.t1 MTR_3g007740 29.924 528 267 21 16 526 1 442 1.51e-41 155
MS.gene73263.t1 MTR_7g058700 31.233 365 163 12 39 372 531 838 5.79e-40 155
MS.gene73263.t1 MTR_7g066280 28.442 443 256 12 114 537 1 401 1.22e-39 149
MS.gene73263.t1 MTR_2g029400 28.600 500 243 15 23 514 10 403 2.84e-37 142
MS.gene73263.t1 MTR_7g066490 33.053 357 184 10 28 371 17 331 3.55e-37 142
MS.gene73263.t1 MTR_7g066490 49.296 71 36 0 456 526 337 407 5.96e-11 65.1
MS.gene73263.t1 MTR_7g066680 32.188 320 157 7 241 522 37 334 6.63e-28 115
MS.gene73263.t1 MTR_1g014060 32.468 231 122 8 36 256 9 215 3.84e-25 107
MS.gene73263.t1 MTR_1g014060 35.377 212 96 7 319 526 210 384 3.31e-19 90.1
MS.gene73263.t1 MTR_7g063720 31.818 242 123 4 285 522 19 222 2.94e-23 99.4
MS.gene73263.t1 MTR_8g445860 29.688 256 120 7 289 520 13 232 6.17e-23 98.2
MS.gene73263.t1 MTR_8g445860 31.120 241 148 5 25 262 11 236 3.77e-21 93.2
MS.gene73263.t1 MTR_4g019350 53.465 101 32 2 347 447 1 86 7.21e-23 93.2
MS.gene73263.t1 MTR_7g100420 33.448 290 155 9 241 522 134 393 1.97e-22 100
MS.gene73263.t1 MTR_1g115440 30.196 255 152 7 16 262 1 237 1.89e-21 94.0
MS.gene73263.t1 MTR_8g023240 23.694 536 306 20 21 528 31 491 2.51e-21 98.2
MS.gene73263.t1 MTR_7g062270 34.466 206 102 7 16 213 1 181 5.21e-21 95.5
MS.gene73263.t1 MTR_0150s0010 32.766 235 143 7 289 520 10 232 1.09e-19 89.0
MS.gene73263.t1 MTR_0150s0010 29.046 241 150 4 28 262 11 236 1.24e-17 82.8
MS.gene73263.t1 MTR_7g063850 26.250 320 188 9 213 525 3 281 1.58e-19 89.7
MS.gene73263.t1 MTR_1g115455 25.911 247 146 4 28 262 10 231 1.28e-13 70.9
MS.gene73263.t1 MTR_1g115455 39.241 79 46 1 289 365 9 87 2.84e-11 63.9
MS.gene73263.t1 MTR_1g115450 41.772 79 44 1 289 365 7 85 9.50e-13 66.2
MS.gene73263.t1 MTR_1g115450 35.043 117 63 1 25 141 5 108 1.47e-12 65.5
MS.gene73263.t1 MTR_7g066390 43.182 88 45 1 440 527 41 123 1.81e-12 65.9
MS.gene73263.t1 MTR_6g006800 63.830 47 16 1 16 62 1 46 2.67e-12 62.4
MS.gene73263.t1 MTR_4g019330 43.478 92 50 2 443 532 97 188 4.41e-11 62.8
MS.gene73263.t1 MTR_0150s0030 33.673 98 56 2 289 383 8 99 5.36e-11 62.8
MS.gene73263.t1 MTR_8g445910 34.694 98 55 2 289 383 8 99 7.62e-11 63.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene73263.t1 AT5G01120 31.141 517 301 14 24 522 6 485 1.29e-59 206
MS.gene73263.t1 AT3G09140 32.122 523 292 15 24 522 6 489 1.82e-59 206
MS.gene73263.t1 AT3G09140 27.236 246 161 6 285 519 5 243 3.02e-14 75.9
MS.gene73263.t1 AT5G43240 31.845 515 296 14 28 522 10 489 7.33e-56 196
MS.gene73263.t1 AT5G43240 31.845 515 296 14 28 522 10 489 7.33e-56 196
MS.gene73263.t1 AT5G43240 31.845 515 296 14 28 522 10 489 7.33e-56 196
MS.gene73263.t1 AT3G09140 30.490 551 292 16 24 522 6 517 3.54e-54 192
MS.gene73263.t1 AT3G09140 27.014 211 137 5 285 485 5 208 6.67e-12 68.6
MS.gene73263.t1 AT5G01130 30.920 511 276 15 17 523 4 441 1.68e-53 188
MS.gene73263.t1 AT5G01140 31.068 515 275 17 17 522 4 447 3.09e-52 185
MS.gene73263.t1 AT5G01150 30.871 528 287 16 17 522 4 475 1.94e-50 181
MS.gene73263.t1 AT3G09110 34.024 338 187 8 24 350 6 318 1.29e-48 172
MS.gene73263.t1 AT3G09120 34.756 328 189 8 24 343 3 313 1.50e-47 168
MS.gene73263.t1 AT3G09120 27.823 248 139 8 289 520 6 229 1.26e-14 75.5
MS.gene73263.t1 AT5G37320 29.456 533 294 18 22 527 3 480 1.92e-45 167
MS.gene73263.t1 AT5G43240 29.132 357 220 7 179 522 9 345 7.69e-27 112

Find 106 sgRNAs with CRISPR-Local

Find 299 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATAATTCAGTCTTACGGTTT+AGG 0.237537 4.1:-79023417 None:intergenic
TGGCGGGTTGTCTTTGTTCC+TGG 0.250804 4.1:-79021995 None:intergenic
GGTATTGTTGATGCTTTAAA+TGG 0.270472 4.1:+79019810 MS.gene73263:CDS
GTTAAATTTGAATCGTGTTT+TGG 0.272974 4.1:-79023348 None:intergenic
CATGCAGATGTTGATGGAAT+TGG 0.293472 4.1:+79019911 MS.gene73263:CDS
TTGTACCCGCGACATTAAAA+TGG 0.294043 4.1:+79022050 MS.gene73263:CDS
CTCACCACTACATATTATTA+TGG 0.301079 4.1:+79022357 MS.gene73263:CDS
AATGATTCACATGGATTCTT+CGG 0.308335 4.1:-79019618 None:intergenic
TCAGAAGCCATTAGAGGTAT+AGG 0.312628 4.1:-79019300 None:intergenic
ATTGATTTGTTAGGAGATCT+TGG 0.318054 4.1:-79022525 None:intergenic
AGGGTCCATTGTAAAGGTTT+TGG 0.343635 4.1:+79022173 MS.gene73263:CDS
GAGAGTGTCAACAAAGTCTT+TGG 0.349073 4.1:-79019406 None:intergenic
GTGAAGAGACCGGCATTATA+TGG 0.352416 4.1:+79022567 MS.gene73263:CDS
GAAGATTGTGCCTAGTTCTT+TGG 0.356635 4.1:+79019881 MS.gene73263:CDS
AGCTTCCTTACAATACCATT+AGG 0.362999 4.1:+79022153 MS.gene73263:CDS
GCTTCCTTACAATACCATTA+GGG 0.366821 4.1:+79022154 MS.gene73263:CDS
ACAGGGTTCCAAACATCATT+TGG 0.367250 4.1:-79019573 None:intergenic
CACACACAACATTGGAAAAC+AGG 0.378988 4.1:+79019965 MS.gene73263:CDS
ACCTCACTCCAAATGATGTT+TGG 0.381037 4.1:+79019565 MS.gene73263:CDS
ACTGCTGATGCAAACTGATT+TGG 0.381142 4.1:-79022015 None:intergenic
GTATTGTTGATGCTTTAAAT+GGG 0.381381 4.1:+79019811 MS.gene73263:CDS
ATGATTCACATGGATTCTTC+GGG 0.382947 4.1:-79019617 None:intergenic
AAATTTGGATTCTGAGGGTC+AGG 0.385988 4.1:+79019776 MS.gene73263:CDS
GGAATGTTGAGGGGCTGGTT+TGG 0.395287 4.1:-79022321 None:intergenic
TCTGAGGGTCAGGGAAATAA+TGG 0.398079 4.1:+79019786 MS.gene73263:CDS
ATGCAGATGTTGATGGAATT+GGG 0.399870 4.1:+79019912 MS.gene73263:CDS
TTCTACTCCTATACCTCTAA+TGG 0.399923 4.1:+79019293 MS.gene73263:CDS
TTCTGATTTGAGTCAATTAG+AGG 0.405222 4.1:+79019938 MS.gene73263:CDS
CAGAGGCTCATGAGAGGTTA+AGG 0.420057 4.1:-79021947 None:intergenic
AGGAGTGATTTCTAAGACAA+TGG 0.423140 4.1:+79022464 MS.gene73263:CDS
GGTTCTTCAGAAGCCATTAG+AGG 0.429312 4.1:-79019306 None:intergenic
CAGGATCTTGATTGTACTTG+TGG 0.453905 4.1:+79019729 MS.gene73263:CDS
CGTTGTTGTGTGTGGTTAAG+AGG 0.456967 4.1:-79019467 None:intergenic
ACCATTAGGGTCCATTGTAA+AGG 0.460196 4.1:+79022167 MS.gene73263:CDS
AGGGATTTACGCTATGGTAA+AGG 0.465522 4.1:+79022402 MS.gene73263:CDS
CCTGGTGTCGCACCACAGTT+TGG 0.469731 4.1:+79022294 MS.gene73263:CDS
GGAGTGATTTCTAAGACAAT+GGG 0.472285 4.1:+79022465 MS.gene73263:CDS
AACAATAGAAGTACCAGTAG+TGG 0.475263 4.1:+79022440 MS.gene73263:CDS
ACCTTTACAATGGACCCTAA+TGG 0.477568 4.1:-79022168 None:intergenic
AACAACATTTGTTTGCAGAC+AGG 0.485916 4.1:-79019591 None:intergenic
CATGAGGAATGTTGAGGGGC+TGG 0.489637 4.1:-79022326 None:intergenic
CTTGGACTCTTTGTGGTGTA+CGG 0.490020 4.1:+79022248 MS.gene73263:CDS
TAGAGAACTTGGACTCTTTG+TGG 0.493299 4.1:+79022241 MS.gene73263:CDS
GACTTCCATGCAGATGTTGA+TGG 0.493543 4.1:+79019905 MS.gene73263:CDS
ACAACATTTGTTTGCAGACA+GGG 0.497506 4.1:-79019590 None:intergenic
GAAATCACTCCTCCCACTAC+TGG 0.501709 4.1:-79022453 None:intergenic
GGGATTTACGCTATGGTAAA+GGG 0.502536 4.1:+79022403 MS.gene73263:CDS
CCAAACTGTGGTGCGACACC+AGG 0.503303 4.1:-79022294 None:intergenic
TCTTGGATCCATTGCAGTCA+AGG 0.503976 4.1:-79022508 None:intergenic
CGCTCCGTGTTACTCAATCC+TGG 0.504813 4.1:+79022276 MS.gene73263:CDS
ATGCAAGAATTAGCAGAAAG+TGG 0.505717 4.1:-79022615 None:intergenic
GTACAAGAGTGTAGAGAACT+TGG 0.512946 4.1:+79022230 MS.gene73263:CDS
TTCAAAATTGTATTTGTCAG+AGG 0.520812 4.1:-79021964 None:intergenic
ACTACATATTATTATGGTAC+AGG 0.521118 4.1:+79022363 MS.gene73263:CDS
TGAATATTGATGACACTGAA+TGG 0.522820 4.1:+79019658 MS.gene73263:CDS
TGCAAAAGCCTTGACTGCAA+TGG 0.525800 4.1:+79022500 MS.gene73263:CDS
TGGACCCTAATGGTATTGTA+AGG 0.526033 4.1:-79022158 None:intergenic
TAGTAGCAAGTGGAAGAGAA+AGG 0.530533 4.1:-79019437 None:intergenic
ATGGAAGTCACCAAAGAACT+AGG 0.531897 4.1:-79019891 None:intergenic
CCTTGTTGATCTTGAAGTGA+AGG 0.535507 4.1:+79022665 MS.gene73263:CDS
GCTGATGCAAACTGATTTGG+CGG 0.536229 4.1:-79022012 None:intergenic
CAAGAGAGGGATTTACGCTA+TGG 0.538492 4.1:+79022396 MS.gene73263:CDS
GATAAGCATTGGTGAGGCTG+AGG 0.538769 4.1:+79022689 MS.gene73263:CDS
TCAAAATTTACACTGACTAG+TGG 0.539589 4.1:+79023303 MS.gene73263:CDS
GATCCTTTGCAAGTTCATCA+AGG 0.539721 4.1:-79023395 None:intergenic
TATTGTTGATGCTTTAAATG+GGG 0.560398 4.1:+79019812 MS.gene73263:CDS
ACAATAGAAGTACCAGTAGT+GGG 0.572712 4.1:+79022441 MS.gene73263:CDS
TCCAAACATCATTTGGAGTG+AGG 0.574002 4.1:-79019566 None:intergenic
GAGGAAGTCACACACAACAT+TGG 0.582955 4.1:+79019957 MS.gene73263:CDS
ACCATCCAAAACCTTTACAA+TGG 0.583435 4.1:-79022178 None:intergenic
TATCCTTGATGAACTTGCAA+AGG 0.583888 4.1:+79023392 MS.gene73263:CDS
TTGTACATGAGGAATGTTGA+GGG 0.587586 4.1:-79022331 None:intergenic
TTGATCATCGTTGTTGTGTG+TGG 0.590152 4.1:-79019475 None:intergenic
CTTCAAGATCAACAAGGGGA+AGG 0.591214 4.1:-79022659 None:intergenic
TCAGAATCATCATCATTCCT+CGG 0.597491 4.1:+79019510 MS.gene73263:CDS
TCTCCTACACCATATAATGC+CGG 0.606100 4.1:-79022576 None:intergenic
CCTTCACTTCAAGATCAACA+AGG 0.610416 4.1:-79022665 None:intergenic
CTGATGCAAACTGATTTGGC+GGG 0.610508 4.1:-79022011 None:intergenic
CAATTCCATCAACATCTGCA+TGG 0.613002 4.1:-79019910 None:intergenic
AGGTTAAGGTGTACTTGAGG+AGG 0.616375 4.1:-79021933 None:intergenic
TTCTTGCATAATGATTCACA+TGG 0.617558 4.1:-79019627 None:intergenic
AGGCGAATGATAGTAGCAAG+TGG 0.618314 4.1:-79019447 None:intergenic
CAGGAACATCAAAGCAAGAG+AGG 0.629221 4.1:+79022382 MS.gene73263:CDS
GTGGTGAGTGTTTGTACATG+AGG 0.631505 4.1:-79022342 None:intergenic
AATTTGGATTCTGAGGGTCA+GGG 0.635203 4.1:+79019777 MS.gene73263:CDS
TGTACCATAATAATATGTAG+TGG 0.647988 4.1:-79022361 None:intergenic
TTGATGTCAAGGAAGCTGCA+AGG 0.648287 4.1:-79023284 None:intergenic
GGTGGGATTTGTGAAGAGAC+CGG 0.651602 4.1:+79022557 MS.gene73263:CDS
AGACCGGCATTATATGGTGT+AGG 0.653054 4.1:+79022573 MS.gene73263:CDS
CTTCACTTCAAGATCAACAA+GGG 0.654366 4.1:-79022664 None:intergenic
GAAGTGAAGGTGATAAGCAT+TGG 0.654807 4.1:+79022678 MS.gene73263:CDS
TGCAGATGTTGATGGAATTG+GGG 0.656452 4.1:+79019913 MS.gene73263:CDS
AGGAACATCAAAGCAAGAGA+GGG 0.661463 4.1:+79022383 MS.gene73263:CDS
GAGAGGTTAAGGTGTACTTG+AGG 0.667782 4.1:-79021936 None:intergenic
ATTTGTCAGAGGCTCATGAG+AGG 0.675408 4.1:-79021953 None:intergenic
TTCACTTCAAGATCAACAAG+GGG 0.676098 4.1:-79022663 None:intergenic
GAGGGTCAGGGAAATAATGG+TGG 0.682469 4.1:+79019789 MS.gene73263:CDS
ACACAACATTGGAAAACAGG+AGG 0.691626 4.1:+79019968 MS.gene73263:CDS
TGTACATGAGGAATGTTGAG+GGG 0.709478 4.1:-79022330 None:intergenic
TTTGTACATGAGGAATGTTG+AGG 0.712351 4.1:-79022332 None:intergenic
GAAGGTGATAAGCATTGGTG+AGG 0.714369 4.1:+79022683 MS.gene73263:CDS
ATAGAAGTACCAGTAGTGGG+AGG 0.716192 4.1:+79022444 MS.gene73263:CDS
ATGTCAAGGAAGCTGCAAGG+AGG 0.721178 4.1:-79023281 None:intergenic
GAGTGATTTCTAAGACAATG+GGG 0.726830 4.1:+79022466 MS.gene73263:CDS
TGGTTTGGACAACCAAACTG+TGG 0.732553 4.1:-79022306 None:intergenic
GACACCAGGATTGAGTAACA+CGG 0.757821 4.1:-79022280 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTAAAAAAAATGTTATATTG+GGG + chr4.1:79021846-79021865 MS.gene73263:intron 10.0%
!! TAACAAATCAATTAAAAATG+TGG + chr4.1:79022536-79022555 MS.gene73263:CDS 15.0%
!!! AAAAGAATCAATAAAAGTAT+TGG - chr4.1:79022874-79022893 None:intergenic 15.0%
!!! ACATTTTTAATTGATTTGTT+AGG - chr4.1:79022537-79022556 None:intergenic 15.0%
!!! GAAATATTATGTTTTGATAT+AGG + chr4.1:79023042-79023061 MS.gene73263:intron 15.0%
!!! TAATTTGAGTTAAGAATTAA+AGG + chr4.1:79021645-79021664 MS.gene73263:intron 15.0%
!!! TTAGTTTAGTGTTAATTTTT+TGG + chr4.1:79020661-79020680 MS.gene73263:intron 15.0%
!!! TTTATAACTTGATGTTTTTT+AGG + chr4.1:79021045-79021064 MS.gene73263:intron 15.0%
!! AAATCAATTAAAAATGTGGT+GGG + chr4.1:79022540-79022559 MS.gene73263:CDS 20.0%
!! ATACAAGATATTAAACCAAA+CGG - chr4.1:79021792-79021811 None:intergenic 20.0%
!! TAATAGACAACCTAAAAATT+TGG + chr4.1:79019761-79019780 MS.gene73263:CDS 20.0%
!! TCAAAATAACTACTGAATAA+TGG + chr4.1:79020877-79020896 MS.gene73263:intron 20.0%
!! TTGATATTGTAGTAAAATGA+GGG + chr4.1:79020465-79020484 MS.gene73263:intron 20.0%
!!! ATAAAAGTATTGGATACTTA+TGG - chr4.1:79022864-79022883 None:intergenic 20.0%
!!! ATTATGTTTTGATATAGGTT+GGG + chr4.1:79023047-79023066 MS.gene73263:intron 20.0%
!!! TAAAAGTATTGGATACTTAT+GGG - chr4.1:79022863-79022882 None:intergenic 20.0%
!!! TATTATGTTTTGATATAGGT+TGG + chr4.1:79023046-79023065 MS.gene73263:intron 20.0%
! AAAGAATAGACAAGAAAGTA+AGG + chr4.1:79021138-79021157 MS.gene73263:intron 25.0%
! AACATCAAGTTATAAAGTGA+AGG - chr4.1:79021041-79021060 None:intergenic 25.0%
! AACATGTTATGAAACAAACA+CGG - chr4.1:79020164-79020183 None:intergenic 25.0%
! AATTCAATACCTCAAATTAC+AGG - chr4.1:79020954-79020973 None:intergenic 25.0%
! ACTACATATTATTATGGTAC+AGG + chr4.1:79022363-79022382 MS.gene73263:CDS 25.0%
! ATAGAAAGTGATAAAACTCT+AGG - chr4.1:79021291-79021310 None:intergenic 25.0%
! ATAGAGAAACAGAATATAGT+AGG + chr4.1:79021201-79021220 MS.gene73263:intron 25.0%
! CAAATCAATTAAAAATGTGG+TGG + chr4.1:79022539-79022558 MS.gene73263:CDS 25.0%
! CTTGATATTGTAGTAAAATG+AGG + chr4.1:79020464-79020483 MS.gene73263:intron 25.0%
! TATGTTATCTTGGCTAAAAT+TGG + chr4.1:79021878-79021897 MS.gene73263:intron 25.0%
! TGCAAAGCTAAGTAAAAATT+GGG + chr4.1:79021239-79021258 MS.gene73263:intron 25.0%
! TGGAACAACAAATAAACAAA+AGG - chr4.1:79022753-79022772 None:intergenic 25.0%
! TGGTGTACCATAAATTAAAA+GGG + chr4.1:79021354-79021373 MS.gene73263:intron 25.0%
! TGTACCATAATAATATGTAG+TGG - chr4.1:79022364-79022383 None:intergenic 25.0%
! TTCAAAATTGTATTTGTCAG+AGG - chr4.1:79021967-79021986 None:intergenic 25.0%
! TTCTAATGCTATACATATCA+TGG + chr4.1:79023163-79023182 MS.gene73263:intron 25.0%
! TTGCAAAGCTAAGTAAAAAT+TGG + chr4.1:79021238-79021257 MS.gene73263:intron 25.0%
!! CTCATTTTACTACAATATCA+AGG - chr4.1:79020466-79020485 None:intergenic 25.0%
!! CTGCAATATAAACGTTTTAT+AGG - chr4.1:79020541-79020560 None:intergenic 25.0%
!! GTATTGTTGATGCTTTAAAT+GGG + chr4.1:79019811-79019830 MS.gene73263:CDS 25.0%
!! GTTAAATTTGAATCGTGTTT+TGG - chr4.1:79023351-79023370 None:intergenic 25.0%
!! TAACAAGTTTACAACTTTTC+AGG + chr4.1:79019710-79019729 MS.gene73263:CDS 25.0%
!! TATTGTTGATGCTTTAAATG+GGG + chr4.1:79019812-79019831 MS.gene73263:CDS 25.0%
!! TTTAAATGGGGTTTTTGTTA+AGG + chr4.1:79019824-79019843 MS.gene73263:CDS 25.0%
!!! AAAGGTGTTGAAATAGTTAA+AGG + chr4.1:79021663-79021682 MS.gene73263:intron 25.0%
!!! ATAACTTGATGTTTTTTAGG+TGG + chr4.1:79021048-79021067 MS.gene73263:intron 25.0%
!!! ATGTTTGCCCTTTTAATTTA+TGG - chr4.1:79021364-79021383 None:intergenic 25.0%
!!! ATTTTTAGGTTGTCTATTAG+TGG - chr4.1:79019760-79019779 None:intergenic 25.0%
!!! TGTAATTTGAGGTATTGAAT+TGG + chr4.1:79020953-79020972 MS.gene73263:intron 25.0%
!!! TTTACTTTTTGAACTTGCAT+TGG + chr4.1:79020988-79021007 MS.gene73263:intron 25.0%
!!! TTTTTAGGTTGTCTATTAGT+GGG - chr4.1:79019759-79019778 None:intergenic 25.0%
!!! TTTTTTAGGTGGTTTGTATT+TGG + chr4.1:79021059-79021078 MS.gene73263:intron 25.0%
AAACATTCACAATGCTATGA+TGG + chr4.1:79021392-79021411 MS.gene73263:intron 30.0%
AATAGACAAGAAAGTAAGGA+GGG + chr4.1:79021142-79021161 MS.gene73263:intron 30.0%
AATGATTCACATGGATTCTT+CGG - chr4.1:79019621-79019640 None:intergenic 30.0%
ACCTAAAAATTTGGATTCTG+AGG + chr4.1:79019770-79019789 MS.gene73263:CDS 30.0%
ACGCCTTCAATAAAAAATGT+CGG - chr4.1:79020047-79020066 None:intergenic 30.0%
AGAAACAGAATATAGTAGGA+GGG + chr4.1:79021205-79021224 MS.gene73263:intron 30.0%
AGAATGCATTGTTATATGCA+GGG - chr4.1:79020758-79020777 None:intergenic 30.0%
CCTAAAAATTTGGATTCTGA+GGG + chr4.1:79019771-79019790 MS.gene73263:CDS 30.0%
CTCACCACTACATATTATTA+TGG + chr4.1:79022357-79022376 MS.gene73263:CDS 30.0%
CTGGTGTACCATAAATTAAA+AGG + chr4.1:79021353-79021372 MS.gene73263:intron 30.0%
GCATCTGTTAAAAACTTGAT+AGG + chr4.1:79021086-79021105 MS.gene73263:intron 30.0%
GTCAATTGTGTATGTTATCT+TGG + chr4.1:79021868-79021887 MS.gene73263:intron 30.0%
TAACAATGTCCTGTAATTTG+AGG + chr4.1:79020942-79020961 MS.gene73263:intron 30.0%
TAGTAAAATGAGGGTAATTG+TGG + chr4.1:79020474-79020493 MS.gene73263:intron 30.0%
TATCGAAAATGTAGTGTATC+TGG - chr4.1:79022969-79022988 None:intergenic 30.0%
TCATATCATACTATGTATCC+AGG + chr4.1:79023221-79023240 MS.gene73263:intron 30.0%
TGAATCATTGTTCCAAAATG+TGG + chr4.1:79020416-79020435 MS.gene73263:intron 30.0%
TGTTGAAATAGTTAAAGGTC+CGG + chr4.1:79021668-79021687 MS.gene73263:intron 30.0%
TTCTTGCATAATGATTCACA+TGG - chr4.1:79019630-79019649 None:intergenic 30.0%
TTTGTTACGATGAGCATTAT+TGG - chr4.1:79021501-79021520 None:intergenic 30.0%
! AGTAAAAATTGGGAGAGTTT+TGG + chr4.1:79021249-79021268 MS.gene73263:intron 30.0%
! CTGTCTATTAAGATTTTCAG+TGG - chr4.1:79019354-79019373 None:intergenic 30.0%
! GGTATTGTTGATGCTTTAAA+TGG + chr4.1:79019810-79019829 MS.gene73263:CDS 30.0%
! GTAAAAATTGGGAGAGTTTT+GGG + chr4.1:79021250-79021269 MS.gene73263:intron 30.0%
! TAAAAATTGGGAGAGTTTTG+GGG + chr4.1:79021251-79021270 MS.gene73263:intron 30.0%
! TAGTTGGTGTACTTAAATCA+TGG + chr4.1:79021428-79021447 MS.gene73263:intron 30.0%
! TCAAAATTTACACTGACTAG+TGG + chr4.1:79023303-79023322 MS.gene73263:CDS 30.0%
! TGAATATTGATGACACTGAA+TGG + chr4.1:79019658-79019677 MS.gene73263:CDS 30.0%
! TTCTGATTTGAGTCAATTAG+AGG + chr4.1:79019938-79019957 MS.gene73263:CDS 30.0%
!! ACTACTGAATAATGGTTTTG+AGG + chr4.1:79020885-79020904 MS.gene73263:intron 30.0%
!! ATTGATTTGTTAGGAGATCT+TGG - chr4.1:79022528-79022547 None:intergenic 30.0%
!! CAGTGTAAATTTTGATGTCA+AGG - chr4.1:79023298-79023317 None:intergenic 30.0%
!! TAACATCCATTTTAATGTCG+CGG - chr4.1:79022059-79022078 None:intergenic 30.0%
AAATCAAGAGGTAAGAATCC+TGG - chr4.1:79023242-79023261 None:intergenic 35.0%
AAATTAGTAGGTCCTTGAAC+TGG + chr4.1:79020325-79020344 MS.gene73263:intron 35.0%
AACAACATTTGTTTGCAGAC+AGG - chr4.1:79019594-79019613 None:intergenic 35.0%
AATGTAGTGTATCTGGAAGA+CGG - chr4.1:79022962-79022981 None:intergenic 35.0%
ACAACATTTGTTTGCAGACA+GGG - chr4.1:79019593-79019612 None:intergenic 35.0%
ACACTGTTATTGTTACCGTT+TGG + chr4.1:79021774-79021793 MS.gene73263:intron 35.0%
ACCATCCAAAACCTTTACAA+TGG - chr4.1:79022181-79022200 None:intergenic 35.0%
AGAACTATGTTGTGAATCGT+CGG + chr4.1:79020589-79020608 MS.gene73263:intron 35.0%
AGCTTCCTTACAATACCATT+AGG + chr4.1:79022153-79022172 MS.gene73263:CDS 35.0%
AGTTCAAGGACCTACTAATT+TGG - chr4.1:79020326-79020345 None:intergenic 35.0%
ATCACTAGCCCACAAATATT+GGG - chr4.1:79020250-79020269 None:intergenic 35.0%
ATCTGTACATCAAAAGGACA+GGG - chr4.1:79021907-79021926 None:intergenic 35.0%
ATGATTCACATGGATTCTTC+GGG - chr4.1:79019620-79019639 None:intergenic 35.0%
ATGCAAGAATTAGCAGAAAG+TGG - chr4.1:79022618-79022637 None:intergenic 35.0%
ATGGTACACCAGAAAACTTT+GGG - chr4.1:79021345-79021364 None:intergenic 35.0%
ATTGTTCCAAAATGTGGTCA+TGG + chr4.1:79020422-79020441 MS.gene73263:intron 35.0%
CAAGGTGAATTCTAGTCATT+AGG - chr4.1:79020695-79020714 None:intergenic 35.0%
CTTCACTTCAAGATCAACAA+GGG - chr4.1:79022667-79022686 None:intergenic 35.0%
GAATAGACAAGAAAGTAAGG+AGG + chr4.1:79021141-79021160 MS.gene73263:intron 35.0%
GAATGCATTGTTATATGCAG+GGG - chr4.1:79020757-79020776 None:intergenic 35.0%
GAGAAACAGAATATAGTAGG+AGG + chr4.1:79021204-79021223 MS.gene73263:intron 35.0%
GAGAATGCATTGTTATATGC+AGG - chr4.1:79020759-79020778 None:intergenic 35.0%
GATACTTATGGGTAGGTATT+AGG - chr4.1:79022852-79022871 None:intergenic 35.0%
GATCAAAGAGGCTAAAAACT+TGG - chr4.1:79022773-79022792 None:intergenic 35.0%
GCATTATTGGAATGGATATC+TGG - chr4.1:79021488-79021507 None:intergenic 35.0%
GCTATGATGGTTTACTTAGT+GGG + chr4.1:79021405-79021424 MS.gene73263:intron 35.0%
GCTTCCTTACAATACCATTA+GGG + chr4.1:79022154-79022173 MS.gene73263:CDS 35.0%
GTATCAAAATGCTACTCGAA+CGG + chr4.1:79020843-79020862 MS.gene73263:intron 35.0%
GTTCAAGGACCTACTAATTT+GGG - chr4.1:79020325-79020344 None:intergenic 35.0%
GTTGAAATAGTTAAAGGTCC+GGG + chr4.1:79021669-79021688 MS.gene73263:intron 35.0%
TACGATGAGCATTATTGGAA+TGG - chr4.1:79021496-79021515 None:intergenic 35.0%
TATCCTTGATGAACTTGCAA+AGG + chr4.1:79023392-79023411 MS.gene73263:CDS 35.0%
TATGGTACACCAGAAAACTT+TGG - chr4.1:79021346-79021365 None:intergenic 35.0%
TCAGAATCATCATCATTCCT+CGG + chr4.1:79019510-79019529 MS.gene73263:CDS 35.0%
TGACTAGAATTCACCTTGTA+AGG + chr4.1:79020697-79020716 MS.gene73263:intron 35.0%
TGCTATGATGGTTTACTTAG+TGG + chr4.1:79021404-79021423 MS.gene73263:intron 35.0%
TTCACTTCAAGATCAACAAG+GGG - chr4.1:79022666-79022685 None:intergenic 35.0%
TTCAGCATCTGTACATCAAA+AGG - chr4.1:79021913-79021932 None:intergenic 35.0%
TTCTACTCCTATACCTCTAA+TGG + chr4.1:79019293-79019312 MS.gene73263:CDS 35.0%
TTCTCACATAGACCTTCTTA+AGG - chr4.1:79021120-79021139 None:intergenic 35.0%
TTGAAATAGTTAAAGGTCCG+GGG + chr4.1:79021670-79021689 MS.gene73263:intron 35.0%
TTGTACATGAGGAATGTTGA+GGG - chr4.1:79022334-79022353 None:intergenic 35.0%
TTTGATCCTATTGATCCTGA+GGG + chr4.1:79021314-79021333 MS.gene73263:intron 35.0%
TTTGTACATGAGGAATGTTG+AGG - chr4.1:79022335-79022354 None:intergenic 35.0%
! AAGAGACACGATTGTGTTTT+CGG + chr4.1:79023003-79023022 MS.gene73263:intron 35.0%
! AGTATTGGATACTTATGGGT+AGG - chr4.1:79022859-79022878 None:intergenic 35.0%
! AGTATTTTTCTCCTTCACCA+GGG - chr4.1:79021702-79021721 None:intergenic 35.0%
! ATGCAGATGTTGATGGAATT+GGG + chr4.1:79019912-79019931 MS.gene73263:CDS 35.0%
! CCCTCAGAATCCAAATTTTT+AGG - chr4.1:79019774-79019793 None:intergenic 35.0%
! GAAGTCAACAAAGTTTTCAC+TGG - chr4.1:79022127-79022146 None:intergenic 35.0%
! GGGTTTTTGTTAAGGACAAT+GGG + chr4.1:79019832-79019851 MS.gene73263:CDS 35.0%
! TAGTATTTTTCTCCTTCACC+AGG - chr4.1:79021703-79021722 None:intergenic 35.0%
! TTGGATGGTAACTCTTTTGT+TGG + chr4.1:79022192-79022211 MS.gene73263:CDS 35.0%
!! AAACTTTATCAGCGTTGATG+TGG + chr4.1:79020127-79020146 MS.gene73263:intron 35.0%
!! AACAATAGAAGTACCAGTAG+TGG + chr4.1:79022440-79022459 MS.gene73263:CDS 35.0%
!! AACATCCATTTTAATGTCGC+GGG - chr4.1:79022058-79022077 None:intergenic 35.0%
!! ACAATAGAAGTACCAGTAGT+GGG + chr4.1:79022441-79022460 MS.gene73263:CDS 35.0%
!! AGGAGTGATTTCTAAGACAA+TGG + chr4.1:79022464-79022483 MS.gene73263:CDS 35.0%
!! ATCGTTTTTGACTCTTCTTG+TGG - chr4.1:79019330-79019349 None:intergenic 35.0%
!! GAGTGATTTCTAAGACAATG+GGG + chr4.1:79022466-79022485 MS.gene73263:CDS 35.0%
!! GGAGTGATTTCTAAGACAAT+GGG + chr4.1:79022465-79022484 MS.gene73263:CDS 35.0%
!!! ATGTTTTGATATAGGTTGGG+TGG + chr4.1:79023050-79023069 MS.gene73263:intron 35.0%
!!! GCACCGACATTTTTTATTGA+AGG + chr4.1:79020041-79020060 MS.gene73263:intron 35.0%
!!! TCCATTGTAAAGGTTTTGGA+TGG + chr4.1:79022177-79022196 MS.gene73263:CDS 35.0%
!!! TGTTTTGATATAGGTTGGGT+GGG + chr4.1:79023051-79023070 MS.gene73263:intron 35.0%
AAAACTCGGTATCCAGTTCA+AGG - chr4.1:79020340-79020359 None:intergenic 40.0%
AAGTAAGGAGGGAAATAGAG+CGG + chr4.1:79021153-79021172 MS.gene73263:intron 40.0%
ACACAACATTGGAAAACAGG+AGG + chr4.1:79019968-79019987 MS.gene73263:CDS 40.0%
ACAGGGTTCCAAACATCATT+TGG - chr4.1:79019576-79019595 None:intergenic 40.0%
ACCATTAGGGTCCATTGTAA+AGG + chr4.1:79022167-79022186 MS.gene73263:CDS 40.0%
ACCTCACTCCAAATGATGTT+TGG + chr4.1:79019565-79019584 MS.gene73263:CDS 40.0%
ACCTTTACAATGGACCCTAA+TGG - chr4.1:79022171-79022190 None:intergenic 40.0%
ACTGCTGATGCAAACTGATT+TGG - chr4.1:79022018-79022037 None:intergenic 40.0%
ACTTATGGGTAGGTATTAGG+AGG - chr4.1:79022849-79022868 None:intergenic 40.0%
AGGAACATCAAAGCAAGAGA+GGG + chr4.1:79022383-79022402 MS.gene73263:CDS 40.0%
AGGGATTTACGCTATGGTAA+AGG + chr4.1:79022402-79022421 MS.gene73263:CDS 40.0%
ATGGAAGTCACCAAAGAACT+AGG - chr4.1:79019894-79019913 None:intergenic 40.0%
CAATTCCATCAACATCTGCA+TGG - chr4.1:79019913-79019932 None:intergenic 40.0%
CACACACAACATTGGAAAAC+AGG + chr4.1:79019965-79019984 MS.gene73263:CDS 40.0%
CAGGATCTTGATTGTACTTG+TGG + chr4.1:79019729-79019748 MS.gene73263:CDS 40.0%
CATCACTAGCCCACAAATAT+TGG - chr4.1:79020251-79020270 None:intergenic 40.0%
CATCTGTACATCAAAAGGAC+AGG - chr4.1:79021908-79021927 None:intergenic 40.0%
CATTGGAAAACAGGAGGTAA+TGG + chr4.1:79019974-79019993 MS.gene73263:intron 40.0%
CCTTCACTTCAAGATCAACA+AGG - chr4.1:79022668-79022687 None:intergenic 40.0%
CCTTGTAAGGTGAATAAGTG+CGG + chr4.1:79020710-79020729 MS.gene73263:intron 40.0%
CCTTGTTGATCTTGAAGTGA+AGG + chr4.1:79022665-79022684 MS.gene73263:CDS 40.0%
CTCAGGATCAATAGGATCAA+AGG - chr4.1:79021315-79021334 None:intergenic 40.0%
CTTATGGGTAGGTATTAGGA+GGG - chr4.1:79022848-79022867 None:intergenic 40.0%
CTTTGATCCTATTGATCCTG+AGG + chr4.1:79021313-79021332 MS.gene73263:intron 40.0%
GAAGTGAAGGTGATAAGCAT+TGG + chr4.1:79022678-79022697 MS.gene73263:CDS 40.0%
GATCCTTTGCAAGTTCATCA+AGG - chr4.1:79023398-79023417 None:intergenic 40.0%
GGGATTTACGCTATGGTAAA+GGG + chr4.1:79022403-79022422 MS.gene73263:CDS 40.0%
TAGAGAACTTGGACTCTTTG+TGG + chr4.1:79022241-79022260 MS.gene73263:CDS 40.0%
TAGTAGCAAGTGGAAGAGAA+AGG - chr4.1:79019440-79019459 None:intergenic 40.0%
TCTCCTACACCATATAATGC+CGG - chr4.1:79022579-79022598 None:intergenic 40.0%
TGGACCCTAATGGTATTGTA+AGG - chr4.1:79022161-79022180 None:intergenic 40.0%
TGTACATGAGGAATGTTGAG+GGG - chr4.1:79022333-79022352 None:intergenic 40.0%
TTCGAATGTGAAACCTTGAG+AGG - chr4.1:79020217-79020236 None:intergenic 40.0%
TTGATCATCGTTGTTGTGTG+TGG - chr4.1:79019478-79019497 None:intergenic 40.0%
TTGTACCCGCGACATTAAAA+TGG + chr4.1:79022050-79022069 MS.gene73263:CDS 40.0%
! AAATTTGGATTCTGAGGGTC+AGG + chr4.1:79019776-79019795 MS.gene73263:CDS 40.0%
! AACAGTGTGTGTGTGTGTTT+TGG - chr4.1:79021762-79021781 None:intergenic 40.0%
! AATTTGGATTCTGAGGGTCA+GGG + chr4.1:79019777-79019796 MS.gene73263:CDS 40.0%
! AGAGACACGATTGTGTTTTC+GGG + chr4.1:79023004-79023023 MS.gene73263:intron 40.0%
! AGGGTCCATTGTAAAGGTTT+TGG + chr4.1:79022173-79022192 MS.gene73263:CDS 40.0%
! CATAAGTGTCGCATAAGTGA+CGG - chr4.1:79020080-79020099 None:intergenic 40.0%
! CATGCAGATGTTGATGGAAT+TGG + chr4.1:79019911-79019930 MS.gene73263:CDS 40.0%
! GAAGATTGTGCCTAGTTCTT+TGG + chr4.1:79019881-79019900 MS.gene73263:CDS 40.0%
! GGGGTTTTTGTTAAGGACAA+TGG + chr4.1:79019831-79019850 MS.gene73263:CDS 40.0%
! GTACAAGAGTGTAGAGAACT+TGG + chr4.1:79022230-79022249 MS.gene73263:CDS 40.0%
! TCAGAAGCCATTAGAGGTAT+AGG - chr4.1:79019303-79019322 None:intergenic 40.0%
! TCCAAACATCATTTGGAGTG+AGG - chr4.1:79019569-79019588 None:intergenic 40.0%
! TGCAGATGTTGATGGAATTG+GGG + chr4.1:79019913-79019932 MS.gene73263:CDS 40.0%
! TGGTTTACTTAGTGGGTAGT+TGG + chr4.1:79021412-79021431 MS.gene73263:intron 40.0%
!! CAATTTTGAAAAGCAGCTCC+AGG + chr4.1:79021977-79021996 MS.gene73263:CDS 40.0%
!! CATTTGGAGTGAGGTTTTGT+AGG - chr4.1:79019560-79019579 None:intergenic 40.0%
!! GAGAGTGTCAACAAAGTCTT+TGG - chr4.1:79019409-79019428 None:intergenic 40.0%
!! GGACAATGGGTCGTTATTTT+TGG + chr4.1:79019845-79019864 MS.gene73263:CDS 40.0%
!! GGTTTTGTAGGCTTTCATAG+AGG - chr4.1:79019548-79019567 None:intergenic 40.0%
!! GTTTTGATATAGGTTGGGTG+GGG + chr4.1:79023052-79023071 MS.gene73263:intron 40.0%
!! TAGGAGAGCATTCCTTAAGA+AGG + chr4.1:79021105-79021124 MS.gene73263:intron 40.0%
!! TGTGTGTGTGTGTTTTGGAT+AGG - chr4.1:79021757-79021776 None:intergenic 40.0%
AGACCGGCATTATATGGTGT+AGG + chr4.1:79022573-79022592 MS.gene73263:CDS 45.0%
AGCCCACAAATATTGGGACA+GGG - chr4.1:79020244-79020263 None:intergenic 45.0%
AGGCGAATGATAGTAGCAAG+TGG - chr4.1:79019450-79019469 None:intergenic 45.0%
AGGTGAATAAGTGCGGTGTT+TGG + chr4.1:79020717-79020736 MS.gene73263:intron 45.0%
AGGTTAAGGTGTACTTGAGG+AGG - chr4.1:79021936-79021955 None:intergenic 45.0%
ATACCTGTCAAACACCACAC+GGG - chr4.1:79022802-79022821 None:intergenic 45.0%
ATTGTTATATGCAGGGGCCA+GGG - chr4.1:79020751-79020770 None:intergenic 45.0%
ATTTGTCAGAGGCTCATGAG+AGG - chr4.1:79021956-79021975 None:intergenic 45.0%
CAAGAGAGGGATTTACGCTA+TGG + chr4.1:79022396-79022415 MS.gene73263:CDS 45.0%
CAGGAACATCAAAGCAAGAG+AGG + chr4.1:79022382-79022401 MS.gene73263:CDS 45.0%
CATACCTGTCAAACACCACA+CGG - chr4.1:79022803-79022822 None:intergenic 45.0%
CCGCACTTATTCACCTTACA+AGG - chr4.1:79020713-79020732 None:intergenic 45.0%
CGTTGTTGTGTGTGGTTAAG+AGG - chr4.1:79019470-79019489 None:intergenic 45.0%
CTCCCTGTCCCAATATTTGT+GGG + chr4.1:79020239-79020258 MS.gene73263:intron 45.0%
CTTCAAGATCAACAAGGGGA+AGG - chr4.1:79022662-79022681 None:intergenic 45.0%
CTTGGACTCTTTGTGGTGTA+CGG + chr4.1:79022248-79022267 MS.gene73263:CDS 45.0%
GACACCAGGATTGAGTAACA+CGG - chr4.1:79022283-79022302 None:intergenic 45.0%
GACTTCCATGCAGATGTTGA+TGG + chr4.1:79019905-79019924 MS.gene73263:CDS 45.0%
GAGAGGTTAAGGTGTACTTG+AGG - chr4.1:79021939-79021958 None:intergenic 45.0%
GAGGAAGTCACACACAACAT+TGG + chr4.1:79019957-79019976 MS.gene73263:CDS 45.0%
GATCAACCCTCAGGATCAAT+AGG - chr4.1:79021323-79021342 None:intergenic 45.0%
GGTGAATAAGTGCGGTGTTT+GGG + chr4.1:79020718-79020737 MS.gene73263:intron 45.0%
GGTTCTTCAGAAGCCATTAG+AGG - chr4.1:79019309-79019328 None:intergenic 45.0%
GTGAAGAGACCGGCATTATA+TGG + chr4.1:79022567-79022586 MS.gene73263:CDS 45.0%
GTGAATAAGTGCGGTGTTTG+GGG + chr4.1:79020719-79020738 MS.gene73263:intron 45.0%
GTGGTGAGTGTTTGTACATG+AGG - chr4.1:79022345-79022364 None:intergenic 45.0%
TAGCCCACAAATATTGGGAC+AGG - chr4.1:79020245-79020264 None:intergenic 45.0%
TCTCCCTGTCCCAATATTTG+TGG + chr4.1:79020238-79020257 MS.gene73263:intron 45.0%
TCTGAGGGTCAGGGAAATAA+TGG + chr4.1:79019786-79019805 MS.gene73263:CDS 45.0%
TCTTGGATCCATTGCAGTCA+AGG - chr4.1:79022511-79022530 None:intergenic 45.0%
TGCAAAAGCCTTGACTGCAA+TGG + chr4.1:79022500-79022519 MS.gene73263:CDS 45.0%
TTGATGTCAAGGAAGCTGCA+AGG - chr4.1:79023287-79023306 None:intergenic 45.0%
! AGACACGATTGTGTTTTCGG+GGG + chr4.1:79023006-79023025 MS.gene73263:intron 45.0%
! AGAGGTTTTTGATGCTTCCG+AGG - chr4.1:79019530-79019549 None:intergenic 45.0%
! GAAAACAGGAGGTAATGGTG+TGG + chr4.1:79019979-79019998 MS.gene73263:intron 45.0%
! GAGACACGATTGTGTTTTCG+GGG + chr4.1:79023005-79023024 MS.gene73263:intron 45.0%
! TGAGCATAGCTCAGTTGGTA+GGG - chr4.1:79020781-79020800 None:intergenic 45.0%
! TGGTTTGGACAACCAAACTG+TGG - chr4.1:79022309-79022328 None:intergenic 45.0%
!! AAACTTTGGGATCAACCCTC+AGG - chr4.1:79021332-79021351 None:intergenic 45.0%
!! ATAGAAGTACCAGTAGTGGG+AGG + chr4.1:79022444-79022463 MS.gene73263:CDS 45.0%
!! CTGATGCAAACTGATTTGGC+GGG - chr4.1:79022014-79022033 None:intergenic 45.0%
!! GAAGGTGATAAGCATTGGTG+AGG + chr4.1:79022683-79022702 MS.gene73263:CDS 45.0%
!! GCTGATGCAAACTGATTTGG+CGG - chr4.1:79022015-79022034 None:intergenic 45.0%
!! GGGTTGATCCCAAAGTTTTC+TGG + chr4.1:79021334-79021353 MS.gene73263:intron 45.0%
!! GGTTGGTCTCCCAAATTAGT+AGG + chr4.1:79020313-79020332 MS.gene73263:intron 45.0%
!! TGTACAGCTCTGGCTTTATG+TGG + chr4.1:79020269-79020288 MS.gene73263:intron 45.0%
!! ATTAAAAAAAATGTTATATT+GGG + chr4.1:79021845-79021864 MS.gene73263:intron 5.0%
!! TATTAAAAAAAATGTTATAT+TGG + chr4.1:79021844-79021863 MS.gene73263:intron 5.0%
!!! TTTTTTTTTTTTTTAAAACT+CGG - chr4.1:79020354-79020373 None:intergenic 5.0%
AAGACGGCTGTGTCTTGAGT+TGG - chr4.1:79022946-79022965 None:intergenic 50.0%
ATCGTCGGTCGTTTCAGTCT+AGG + chr4.1:79020604-79020623 MS.gene73263:intron 50.0%
ATGTCAAGGAAGCTGCAAGG+AGG - chr4.1:79023284-79023303 None:intergenic 50.0%
CAGAGGCTCATGAGAGGTTA+AGG - chr4.1:79021950-79021969 None:intergenic 50.0%
CATTGTTATATGCAGGGGCC+AGG - chr4.1:79020752-79020771 None:intergenic 50.0%
CCAAAATGTGGTCATGGCTG+TGG + chr4.1:79020428-79020447 MS.gene73263:intron 50.0%
CGACATCGCAACTGCAATTG+CGG - chr4.1:79020509-79020528 None:intergenic 50.0%
CTTAGAGTGTGCTCCTCTCA+AGG + chr4.1:79020201-79020220 MS.gene73263:intron 50.0%
GAAATCACTCCTCCCACTAC+TGG - chr4.1:79022456-79022475 None:intergenic 50.0%
GAGGGTCAGGGAAATAATGG+TGG + chr4.1:79019789-79019808 MS.gene73263:CDS 50.0%
GGTGGGATTTGTGAAGAGAC+CGG + chr4.1:79022557-79022576 MS.gene73263:CDS 50.0%
GTGAGCATAGCTCAGTTGGT+AGG - chr4.1:79020782-79020801 None:intergenic 50.0%
TCGTCGGTCGTTTCAGTCTA+GGG + chr4.1:79020605-79020624 MS.gene73263:intron 50.0%
TTTATGTGGAGCCCCACGAT+TGG + chr4.1:79020283-79020302 MS.gene73263:intron 50.0%
! CCACAGCCATGACCACATTT+TGG - chr4.1:79020431-79020450 None:intergenic 50.0%
! CTTGAGAGGAGCACACTCTA+AGG - chr4.1:79020203-79020222 None:intergenic 50.0%
!! GATAAGCATTGGTGAGGCTG+AGG + chr4.1:79022689-79022708 MS.gene73263:CDS 50.0%
!! TGCAGCTGCATTTGCTGTTG+CGG + chr4.1:79020556-79020575 MS.gene73263:intron 50.0%
CATGAGGAATGTTGAGGGGC+TGG - chr4.1:79022329-79022348 None:intergenic 55.0%
CCAACTGAGCTATGCTCACG+AGG + chr4.1:79020783-79020802 MS.gene73263:intron 55.0%
CCTCGTGAGCATAGCTCAGT+TGG - chr4.1:79020786-79020805 None:intergenic 55.0%
CTGTCAAACACCACACGGGA+GGG - chr4.1:79022798-79022817 None:intergenic 55.0%
GCTACTCGAACGGTCATGTC+TGG + chr4.1:79020853-79020872 MS.gene73263:intron 55.0%
TGTCAAACACCACACGGGAG+GGG - chr4.1:79022797-79022816 None:intergenic 55.0%
! CGCTCCGTGTTACTCAATCC+TGG + chr4.1:79022276-79022295 MS.gene73263:CDS 55.0%
! GGGCTAGTGATGTACAGCTC+TGG + chr4.1:79020259-79020278 MS.gene73263:intron 55.0%
!! GGAATGTTGAGGGGCTGGTT+TGG - chr4.1:79022324-79022343 None:intergenic 55.0%
!! TGGCGGGTTGTCTTTGTTCC+TGG - chr4.1:79021998-79022017 None:intergenic 55.0%
AACCCCACCGTCCAATCGTG+GGG - chr4.1:79020297-79020316 None:intergenic 60.0%
CAACCCCACCGTCCAATCGT+GGG - chr4.1:79020298-79020317 None:intergenic 60.0%
CACGGGAGGGGAGATCAAAG+AGG - chr4.1:79022785-79022804 None:intergenic 60.0%
CCAAACTGTGGTGCGACACC+AGG - chr4.1:79022297-79022316 None:intergenic 60.0%
CCTCCCGTGTGGTGTTTGAC+AGG + chr4.1:79022796-79022815 MS.gene73263:intron 60.0%
CCTGTCAAACACCACACGGG+AGG - chr4.1:79022799-79022818 None:intergenic 60.0%
CTTCACCAGGGTTCGAACCC+CGG - chr4.1:79021690-79021709 None:intergenic 60.0%
CTTTGATCTCCCCTCCCGTG+TGG + chr4.1:79022785-79022804 MS.gene73263:intron 60.0%
TGTGGAGCCCCACGATTGGA+CGG + chr4.1:79020287-79020306 MS.gene73263:intron 60.0%
! GGTGTTTGGGGTTCGAACCC+TGG + chr4.1:79020731-79020750 MS.gene73263:intron 60.0%
!! CCTGGTGTCGCACCACAGTT+TGG + chr4.1:79022294-79022313 MS.gene73263:CDS 60.0%
AAGGTCCGGGGTTCGAACCC+TGG + chr4.1:79021682-79021701 MS.gene73263:intron 65.0%
AGCCCCACGATTGGACGGTG+GGG + chr4.1:79020292-79020311 MS.gene73263:intron 65.0%
CCAACCCCACCGTCCAATCG+TGG - chr4.1:79020299-79020318 None:intergenic 65.0%
CCACGATTGGACGGTGGGGT+TGG + chr4.1:79020296-79020315 MS.gene73263:intron 65.0%
CGGGGTTCGAACCCTGGTGA+AGG + chr4.1:79021688-79021707 MS.gene73263:intron 65.0%
GAGCCCCACGATTGGACGGT+GGG + chr4.1:79020291-79020310 MS.gene73263:intron 65.0%
GGAGCCCCACGATTGGACGG+TGG + chr4.1:79020290-79020309 MS.gene73263:intron 70.0%


Chromosome Type Strat End Strand Name
chr4.1 gene 79019267 79023428 79019267 ID=MS.gene73263
chr4.1 mRNA 79019267 79023428 79019267 ID=MS.gene73263.t1;Parent=MS.gene73263
chr4.1 exon 79019267 79019989 79019267 ID=MS.gene73263.t1.exon1;Parent=MS.gene73263.t1
chr4.1 CDS 79019267 79019989 79019267 ID=cds.MS.gene73263.t1;Parent=MS.gene73263.t1
chr4.1 exon 79021925 79022710 79021925 ID=MS.gene73263.t1.exon2;Parent=MS.gene73263.t1
chr4.1 CDS 79021925 79022710 79021925 ID=cds.MS.gene73263.t1;Parent=MS.gene73263.t1
chr4.1 exon 79023273 79023428 79023273 ID=MS.gene73263.t1.exon3;Parent=MS.gene73263.t1
chr4.1 CDS 79023273 79023428 79023273 ID=cds.MS.gene73263.t1;Parent=MS.gene73263.t1
Gene Sequence

>MS.gene73263

ATGCAGCACATTTCTCAATTTCAAAGTTCTACTCCTATACCTCTAATGGCTTCTGAAGAACCACAAGAAGAGTCAAAAACGATTCCACTGAAAATCTTAATAGACAGAGAAAACAACAAAGTTGTCGCTGTAGAATCAACCAAAGACTTTGTTGACACTCTCTTCAGCTTCCTTTCTCTTCCACTTGCTACTATCATTCGCCTCTTAACCACACACAACAACGATGATCAACAACAAGAAGCATCAGAATCATCATCATTCCTCGGAAGCATCAAAAACCTCTATGAAAGCCTACAAAACCTCACTCCAAATGATGTTTGGAACCCTGTCTGCAAACAAATGTTGTTGAACCCGAAGAATCCATGTGAATCATTATGCAAGAAACTTTTCTTGAATATTGATGACACTGAATGGTCAAGTAAGTTTTTTGTGTGTGATGCTTGTAACAAGTTTACAACTTTTCAGGATCTTGATTGTACTTGTGGAAAACCCACTAATAGACAACCTAAAAATTTGGATTCTGAGGGTCAGGGAAATAATGGTGGTATTGTTGATGCTTTAAATGGGGTTTTTGTTAAGGACAATGGGTCGTTATTTTTGGTGTTTGATGATTTGAAGATTGTGCCTAGTTCTTTGGTGACTTCCATGCAGATGTTGATGGAATTGGGGTATTCTGATTTGAGTCAATTAGAGGAAGTCACACACAACATTGGAAAACAGGAGGTAATGGTGTGGTGTTTTGCAATGTGTATTTTTATGTCATGTTACTATGTTGCACCGACATTTTTTATTGAAGGCGTGTGTCTGACACCGTCACTTATGCGACACTTATGATTGAATTGAATTATGTCATTTTCTTAAAACTTTATCAGCGTTGATGTGGCAGTGTTGTGTCCGTGTTTGTTTCATAACATGTTAGTTTGTAGAGTAAGACCTTAGAGTGTGCTCCTCTCAAGGTTTCACATTCGAATTCTCCCTGTCCCAATATTTGTGGGCTAGTGATGTACAGCTCTGGCTTTATGTGGAGCCCCACGATTGGACGGTGGGGTTGGTCTCCCAAATTAGTAGGTCCTTGAACTGGATACCGAGTTTTAAAAAAAAAAAAAAATATTGTAGTGTAAGAAAAATTCGAAAGAATATTTGAAATTGTGAATCATTGTTCCAAAATGTGGTCATGGCTGTGGTTACGATGCGAACCTTGATATTGTAGTAAAATGAGGGTAATTGTGGTCGATGCAACCGCAATTGCAGTTGCGATGTCGTTGCAGAGACCTATAAAACGTTTATATTGCAGCTGCATTTGCTGTTGCGGACTGCAATTTAGAACTATGTTGTGAATCGTCGGTCGTTTCAGTCTAGGGTTATTTAGAACTCAAGTCTTAAGTGTTAGCATTTTAGTTTAGTGTTAATTTTTTGGTCTAGTAGCCTAATGACTAGAATTCACCTTGTAAGGTGAATAAGTGCGGTGTTTGGGGTTCGAACCCTGGCCCCTGCATATAACAATGCATTCTCCCTACCAACTGAGCTATGCTCACGAGGAATTCTGTGTTAATTAGAATACACTTGTTAACTATGAGTATCAAAATGCTACTCGAACGGTCATGTCTGGATCAAAATAACTACTGAATAATGGTTTTGAGGTCTTTTCTGAATTTTTCTTGTTTCACAGACAAGCTAACAATGTCCTGTAATTTGAGGTATTGAATTGGTGATTCACTCTTTTTACTTTTTGAACTTGCATTGGATCTTTAGACTGTTCTTGAATTATGAACCTTCACTTTATAACTTGATGTTTTTTAGGTGGTTTGTATTTGGAATAGCATCTGTTAAAAACTTGATAGGAGAGCATTCCTTAAGAAGGTCTATGTGAGAAAGAATAGACAAGAAAGTAAGGAGGGAAATAGAGCGGTTGTAACTGATATAGTTGTAAACTGATAGAGAAACAGAATATAGTAGGAGGGAATAAGCGTTTTGCAAAGCTAAGTAAAAATTGGGAGAGTTTTGGGGCACTTTTGAATTAGCCTAGAGTTTTATCACTTTCTATTCCTTTGATCCTATTGATCCTGAGGGTTGATCCCAAAGTTTTCTGGTGTACCATAAATTAAAAGGGCAAACATTACTTAATAAACATTCACAATGCTATGATGGTTTACTTAGTGGGTAGTTGGTGTACTTAAATCATGGACACACTATAAATCTTCAGTTAGAAATTAGTACTCCAGATATCCATTCCAATAATGCTCATCGTAACAAATTAGTAAGTATTTCTTTTGAATATAACAAACAACTAATAAGTTTTATTGTTATTGCTGCTGTGTGATCAGTAGAACTAGAACATACTGAAATGTGTTCGTCAGAGTAGCATTGTGTATCTCAACTAATTTGAGTTAAGAATTAAAGGTGTTGAAATAGTTAAAGGTCCGGGGTTCGAACCCTGGTGAAGGAGAAAAATACTAACATCACTAGTAATAAATATGCTAACATTTGCCTATCCAAAACACACACACACACTGTTATTGTTACCGTTTGGTTTAATATCTTGTATTTCTGTTATGTAATGTGAATTTGTTAGTGAAATATTAAAAAAAATGTTATATTGGGGTCAATTGTGTATGTTATCTTGGCTAAAATTGGTTTCCCTGTCCTTTTGATGTACAGATGCTGAACCTCCTCAAGTACACCTTAACCTCTCATGAGCCTCTGACAAATACAATTTTGAAAAGCAGCTCCAGGAACAAAGACAACCCGCCAAATCAGTTTGCATCAGCAGTTAGAGTAAAAACTTGTACCCGCGACATTAAAATGGATGTTAAGCTAGTGCAAAGTAAATCTCAGAAAAAGATAATCTGTGCAGAAGCCAGTGAAAACTTTGTTGACTTCATGCTTAGCTTCCTTACAATACCATTAGGGTCCATTGTAAAGGTTTTGGATGGTAACTCTTTTGTTGGATGTGTTGATAATTTGTACAAGAGTGTAGAGAACTTGGACTCTTTGTGGTGTACGGACTCGCGCTCCGTGTTACTCAATCCTGGTGTCGCACCACAGTTTGGTTGTCCAAACCAGCCCCTCAACATTCCTCATGTACAAACACTCACCACTACATATTATTATGGTACAGGAACATCAAAGCAAGAGAGGGATTTACGCTATGGTAAAGGGTATACTATCTATAAAACAATAGAAGTACCAGTAGTGGGAGGAGTGATTTCTAAGACAATGGGGTCAATTTATAATGCAAAAGCCTTGACTGCAATGGATCCAAGATCTCCTAACAAATCAATTAAAAATGTGGTGGGATTTGTGAAGAGACCGGCATTATATGGTGTAGGAGATGATCTAAAAGTAAAACCACTTTCTGCTAATTCTTGCATTTCATATTTGAAAGAATTAAGCCTTCCCCTTGTTGATCTTGAAGTGAAGGTGATAAGCATTGGTGAGGCTGAGGTAAAGTGACTACTATTACTAAACTTATAATTTTTTTTTCCTTTTGTTTATTTGTTGTTCCAAGTTTTTAGCCTCTTTGATCTCCCCTCCCGTGTGGTGTTTGACAGGTATGTGATACTGATACGCATCACATACCCTCCTAATACCTACCCATAAGTATCCAATACTTTTATTGATTCTTTTTAAAAATATTTTCATCGATACTTCTCAAATACATCTTCAATACTTCTTACCAACTCAAGACACAGCCGTCTTCCAGATACACTACATTTTCGATATGCTTTACTAACTAAAGAGACACGATTGTGTTTTCGGGGGCACATTCTTCGTAGAAATATTATGTTTTGATATAGGTTGGGTGGGGTAATTATATATATGTAACTATGCTTAGATGTTATGATTACAAGTACTTTTATGTAAATTGCGATTACACTAATATCTTTATAAACGTTTTCTAATGCTATACATATCATGGTTTTGTCATATCGTCATTTATGTGTCATGTTGAATTCATATCATACTATGTATCCAGGATTCTTACCTCTTGATTTGCAATTTGCAGGCTTTGAGCCTCCTTGCAGCTTCCTTGACATCAAAATTTACACTGACTAGTGGACTAGAAGAATTTTTTAATGTGCCAAAACACGATTCAAATTTAACATCGAAGTATGTACAAACTAGTATCCTTGATGAACTTGCAAAGGATCCTAAACCGTAA
Protein sequence

>MS.gene73263.t1

MQHISQFQSSTPIPLMASEEPQEESKTIPLKILIDRENNKVVAVESTKDFVDTLFSFLSLPLATIIRLLTTHNNDDQQQEASESSSFLGSIKNLYESLQNLTPNDVWNPVCKQMLLNPKNPCESLCKKLFLNIDDTEWSSKFFVCDACNKFTTFQDLDCTCGKPTNRQPKNLDSEGQGNNGGIVDALNGVFVKDNGSLFLVFDDLKIVPSSLVTSMQMLMELGYSDLSQLEEVTHNIGKQEMLNLLKYTLTSHEPLTNTILKSSSRNKDNPPNQFASAVRVKTCTRDIKMDVKLVQSKSQKKIICAEASENFVDFMLSFLTIPLGSIVKVLDGNSFVGCVDNLYKSVENLDSLWCTDSRSVLLNPGVAPQFGCPNQPLNIPHVQTLTTTYYYGTGTSKQERDLRYGKGYTIYKTIEVPVVGGVISKTMGSIYNAKALTAMDPRSPNKSIKNVVGFVKRPALYGVGDDLKVKPLSANSCISYLKELSLPLVDLEVKVISIGEAEALSLLAASLTSKFTLTSGLEEFFNVPKHDSNLTSKYVQTSILDELAKDPKP