AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene84605

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene84605.t1 MTR_7g066310 53.155 412 173 6 3 405 6 406 1.43e-132 386
MS.gene84605.t1 MTR_7g066350 49.663 445 148 10 3 378 8 445 1.66e-119 355
MS.gene84605.t1 MTR_7g066260 65.957 282 82 6 135 405 214 492 3.35e-115 345
MS.gene84605.t1 MTR_7g066260 80.220 91 18 0 2 92 13 103 1.56e-42 155
MS.gene84605.t1 MTR_7g066580 46.325 449 155 9 10 379 1 442 2.20e-112 337
MS.gene84605.t1 MTR_7g012680 46.050 443 178 10 3 388 13 451 2.06e-102 311
MS.gene84605.t1 MTR_2g029400 45.585 419 153 9 3 372 13 405 2.47e-102 309
MS.gene84605.t1 MTR_7g066340 60.650 277 104 3 129 405 205 476 6.71e-102 310
MS.gene84605.t1 MTR_7g066340 72.222 90 25 0 3 92 11 100 5.92e-36 137
MS.gene84605.t1 MTR_7g066430 39.220 487 189 11 1 382 1 485 7.47e-94 291
MS.gene84605.t1 MTR_7g066360 61.071 280 88 6 135 404 210 478 1.61e-92 286
MS.gene84605.t1 MTR_7g066360 76.136 88 21 0 5 92 15 102 3.68e-36 138
MS.gene84605.t1 MTR_7g066280 50.814 307 97 5 149 405 111 413 1.46e-83 261
MS.gene84605.t1 MTR_7g066400 53.878 245 106 3 140 378 190 433 3.36e-81 256
MS.gene84605.t1 MTR_7g066400 59.341 91 21 1 2 92 10 84 7.74e-25 105
MS.gene84605.t1 MTR_7g066290 58.498 253 69 3 135 383 214 434 8.58e-81 255
MS.gene84605.t1 MTR_7g066290 74.194 93 24 0 2 94 13 105 3.39e-39 145
MS.gene84605.t1 MTR_7g066480 38.288 444 177 9 3 384 15 423 2.90e-75 240
MS.gene84605.t1 MTR_7g063920 39.767 430 198 9 4 382 11 430 2.96e-75 241
MS.gene84605.t1 MTR_7g063920 29.000 200 119 6 193 385 14 197 1.95e-13 72.0
MS.gene84605.t1 MTR_1g041315 57.205 229 92 3 140 366 227 451 1.29e-73 238
MS.gene84605.t1 MTR_1g041315 49.306 144 55 2 3 133 13 151 7.50e-36 137
MS.gene84605.t1 MTR_7g066570 48.822 297 115 5 133 397 202 493 1.57e-72 237
MS.gene84605.t1 MTR_7g066570 58.871 124 41 2 3 126 13 126 4.55e-39 147
MS.gene84605.t1 MTR_7g066680 47.000 300 97 5 139 378 37 334 5.01e-72 229
MS.gene84605.t1 MTR_7g063830 36.364 451 191 10 5 382 11 438 1.11e-67 221
MS.gene84605.t1 MTR_7g063830 28.879 232 130 9 185 385 5 232 1.85e-12 68.9
MS.gene84605.t1 MTR_7g066490 36.891 431 185 9 4 384 16 409 1.26e-67 220
MS.gene84605.t1 MTR_7g058710 47.500 280 112 3 135 382 201 477 1.30e-63 212
MS.gene84605.t1 MTR_7g058710 68.889 90 16 1 3 92 11 88 6.51e-33 129
MS.gene84605.t1 MTR_3g007740 35.794 447 206 14 4 382 9 442 1.30e-54 187
MS.gene84605.t1 MTR_3g007740 29.032 217 128 8 189 385 8 218 3.36e-12 68.2
MS.gene84605.t1 MTR_7g058700 43.416 281 108 5 105 382 689 921 1.64e-54 194
MS.gene84605.t1 MTR_7g058700 72.727 77 7 1 16 92 531 593 1.02e-24 107
MS.gene84605.t1 MTR_3g065200 33.875 431 195 10 4 369 3 408 8.29e-53 182
MS.gene84605.t1 MTR_7g066390 56.875 160 39 1 231 390 1 130 1.52e-50 167
MS.gene84605.t1 MTR_7g062280 38.438 320 150 8 92 382 184 485 1.64e-46 166
MS.gene84605.t1 MTR_7g062280 54.444 90 41 0 4 93 10 99 1.67e-21 96.7
MS.gene84605.t1 MTR_7g062280 43.529 85 42 2 4 87 266 345 6.34e-13 70.5
MS.gene84605.t1 MTR_7g066410 38.929 280 134 4 140 382 233 512 2.07e-46 167
MS.gene84605.t1 MTR_7g066410 54.444 90 41 0 4 93 10 99 5.50e-27 112
MS.gene84605.t1 MTR_7g063720 41.935 217 109 5 180 382 13 226 6.52e-45 155
MS.gene84605.t1 MTR_7g063720 38.372 86 47 2 4 88 23 103 2.18e-12 67.0
MS.gene84605.t1 MTR_7g063820 35.604 323 159 7 92 382 173 478 2.83e-44 160
MS.gene84605.t1 MTR_7g063820 58.427 89 36 1 5 93 11 98 1.56e-21 96.7
MS.gene84605.t1 MTR_7g063820 31.325 166 98 4 7 165 257 413 2.04e-11 65.9
MS.gene84605.t1 MTR_1g014060 49.171 181 80 2 220 388 210 390 6.81e-44 157
MS.gene84605.t1 MTR_1g014060 72.500 80 22 0 13 92 9 88 1.31e-32 127
MS.gene84605.t1 MTR_7g062300 39.437 284 136 6 123 380 198 471 2.21e-43 157
MS.gene84605.t1 MTR_7g062300 55.556 90 40 0 4 93 12 101 1.09e-22 100
MS.gene84605.t1 MTR_7g062300 44.706 85 41 2 4 87 256 335 2.59e-13 71.6
MS.gene84605.t1 MTR_4g017470 29.374 463 237 10 5 382 13 470 3.03e-43 157
MS.gene84605.t1 MTR_7g063670 37.748 302 159 9 92 382 168 451 4.14e-43 157
MS.gene84605.t1 MTR_7g063670 57.576 66 28 0 5 70 16 81 2.23e-15 78.2
MS.gene84605.t1 MTR_7g100420 33.333 411 188 13 5 382 40 397 2.42e-41 150
MS.gene84605.t1 MTR_4g017440 29.175 497 224 15 5 382 15 502 2.16e-40 150
MS.gene84605.t1 MTR_7g063660 36.861 274 135 5 139 382 206 471 7.53e-40 148
MS.gene84605.t1 MTR_7g063660 60.674 89 35 0 4 92 9 97 1.46e-27 114
MS.gene84605.t1 MTR_7g063660 29.545 220 125 7 185 375 4 222 4.50e-13 70.9
MS.gene84605.t1 MTR_7g063660 29.655 145 92 4 4 144 250 388 1.81e-11 65.9
MS.gene84605.t1 MTR_4g019310 36.013 311 142 10 114 382 195 490 1.70e-38 145
MS.gene84605.t1 MTR_4g019310 45.361 97 45 1 7 95 11 107 2.61e-18 87.0
MS.gene84605.t1 MTR_7g063840 35.793 271 137 4 139 382 207 467 2.02e-37 141
MS.gene84605.t1 MTR_7g063840 56.180 89 39 0 5 93 11 99 1.50e-22 99.8
MS.gene84605.t1 MTR_7g063900 38.163 283 127 6 139 382 209 482 1.08e-34 134
MS.gene84605.t1 MTR_7g063900 61.111 90 35 0 4 93 10 99 1.75e-26 111
MS.gene84605.t1 MTR_7g063900 28.251 223 126 9 184 375 6 225 2.88e-14 74.7
MS.gene84605.t1 MTR_7g063880 32.817 323 157 11 92 383 170 463 2.81e-32 127
MS.gene84605.t1 MTR_7g063880 62.222 90 34 0 4 93 11 100 9.59e-27 111
MS.gene84605.t1 MTR_7g063880 29.258 229 115 7 185 375 6 225 1.42e-11 66.2
MS.gene84605.t1 MTR_4g017830 32.075 318 170 9 121 396 202 515 1.25e-31 126
MS.gene84605.t1 MTR_4g017830 43.878 98 49 2 5 96 13 110 3.32e-16 80.9
MS.gene84605.t1 MTR_7g063890 37.458 299 138 9 123 382 210 498 3.37e-28 116
MS.gene84605.t1 MTR_7g063890 54.839 93 42 0 4 96 27 119 2.32e-24 105
MS.gene84605.t1 MTR_7g063890 32.083 240 129 9 169 375 3 241 1.16e-15 79.0
MS.gene84605.t1 MTR_7g063690 38.222 225 112 8 5 217 13 222 8.46e-28 110
MS.gene84605.t1 MTR_4g019340 31.579 285 164 9 110 370 224 501 9.26e-25 106
MS.gene84605.t1 MTR_4g019340 43.137 102 47 1 5 95 39 140 5.27e-18 86.3
MS.gene84605.t1 MTR_4g017550 32.013 303 151 12 124 379 176 470 1.42e-24 105
MS.gene84605.t1 MTR_7g063850 32.743 226 110 6 190 382 66 282 1.56e-24 102
MS.gene84605.t1 MTR_4g017610 29.431 299 167 8 110 378 191 475 5.06e-21 95.1
MS.gene84605.t1 MTR_4g017610 47.959 98 43 2 7 96 16 113 2.60e-20 92.8
MS.gene84605.t1 MTR_7g062270 51.685 89 43 0 5 93 11 99 6.99e-21 94.0
MS.gene84605.t1 MTR_4g017410 28.819 288 180 8 117 382 200 484 9.19e-20 91.7
MS.gene84605.t1 MTR_4g017410 46.078 102 45 3 5 96 10 111 2.28e-19 90.5
MS.gene84605.t1 MTR_2g067310 54.878 82 32 1 14 95 57 133 1.71e-19 87.4
MS.gene84605.t1 MTR_4g019240 43.000 100 49 3 5 96 14 113 8.41e-18 81.3
MS.gene84605.t1 MTR_4g019330 33.702 181 88 5 204 382 32 182 1.76e-17 80.5
MS.gene84605.t1 MTR_7g063760 53.846 65 29 1 319 382 3 67 1.31e-15 71.6
MS.gene84605.t1 MTR_8g023240 27.778 288 146 10 139 383 222 490 3.94e-15 77.4
MS.gene84605.t1 MTR_1g115450 38.824 85 47 1 4 88 7 86 1.05e-14 71.2
MS.gene84605.t1 MTR_0150s0010 41.860 86 45 1 3 88 9 89 7.73e-14 71.2
MS.gene84605.t1 MTR_8g445860 37.647 85 48 1 4 88 13 92 3.84e-13 68.9
MS.gene84605.t1 MTR_1g115440 41.176 85 45 1 3 87 10 89 4.41e-13 68.9
MS.gene84605.t1 MTR_1g115455 38.824 85 47 1 4 88 9 88 9.76e-13 67.8
MS.gene84605.t1 MTR_1g115470 40.698 86 46 1 6 91 8 88 8.01e-12 67.0
MS.gene84605.t1 MTR_8g445920 38.095 84 47 1 3 86 9 87 1.14e-11 61.6
MS.gene84605.t1 MTR_8g044890 38.095 84 47 1 3 86 9 87 1.14e-11 61.6
MS.gene84605.t1 MTR_0150s0030 36.471 85 48 2 4 87 8 87 2.40e-11 63.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene84605.t1 AT5G01150 26.907 472 253 10 6 385 11 482 3.16e-32 127
MS.gene84605.t1 AT5G01140 29.730 296 171 5 135 404 188 472 2.19e-23 102
MS.gene84605.t1 AT3G09110 45.882 85 46 0 6 90 11 95 1.40e-18 86.7
MS.gene84605.t1 AT5G01120 43.820 89 50 0 5 93 10 98 5.58e-18 86.3
MS.gene84605.t1 AT5G43240 44.578 83 46 0 5 87 10 92 2.73e-17 84.0
MS.gene84605.t1 AT5G43240 44.578 83 46 0 5 87 10 92 2.73e-17 84.0
MS.gene84605.t1 AT5G43240 44.578 83 46 0 5 87 10 92 2.73e-17 84.0
MS.gene84605.t1 AT3G09140 28.526 312 179 10 108 386 197 497 4.60e-17 83.2
MS.gene84605.t1 AT3G09140 40.698 86 51 0 4 89 9 94 3.91e-16 80.5
MS.gene84605.t1 AT3G09120 44.944 89 48 1 4 92 6 93 4.99e-17 81.6
MS.gene84605.t1 AT3G09140 28.975 283 158 9 137 386 253 525 1.64e-16 81.6
MS.gene84605.t1 AT3G09140 40.698 86 51 0 4 89 9 94 3.90e-16 80.5
MS.gene84605.t1 AT5G01130 27.027 259 164 5 135 382 200 444 3.36e-16 80.5
MS.gene84605.t1 AT5G01130 43.956 91 50 1 4 94 9 98 7.69e-16 79.3
MS.gene84605.t1 AT5G43240 29.221 308 173 9 133 404 69 367 2.51e-15 77.4

Find 82 sgRNAs with CRISPR-Local

Find 273 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CAACTTCCTCAATGTCATTT+AGG 0.107785 7.3:-38991666 None:intergenic
GATCCCAAATCCTCTGTTTC+TGG 0.168797 7.3:+38991538 MS.gene84605:CDS
GCTTCTTAACATTGCCTTTA+GGG 0.201640 7.3:+38988825 MS.gene84605:CDS
CAAGACCTCACCATCTTCTT+TGG 0.236047 7.3:-38991506 None:intergenic
TCCTCCAGAAACAGAGGATT+TGG 0.249852 7.3:-38991542 None:intergenic
GAGGAAGTTGTTGTTAATAT+TGG 0.279579 7.3:+38991679 MS.gene84605:CDS
AACTTCCTCAATGTCATTTA+GGG 0.292513 7.3:-38991665 None:intergenic
AATATCGAAGCAATGAAATT+TGG 0.294760 7.3:+38988878 MS.gene84605:CDS
CACCGGACCAACAACGATTA+TGG 0.300329 7.3:+38991570 MS.gene84605:CDS
AGCTTCTTAACATTGCCTTT+AGG 0.310196 7.3:+38988824 MS.gene84605:CDS
GGTTACTGTAAAGGAGGATT+TGG 0.324395 7.3:-38989427 None:intergenic
AAGGGCCTCAAACACTTCTT+AGG 0.339017 7.3:+38991849 MS.gene84605:CDS
CTCAACATCTGCTTTGACTA+AGG 0.358011 7.3:+38991830 MS.gene84605:CDS
CGAAGTTACATTGAAAGTTA+TGG 0.386783 7.3:+38988736 MS.gene84605:CDS
AGAAGGAAAATTGCCGAGTA+TGG 0.396037 7.3:-38989385 None:intergenic
TCAACTAGAAACATTCTGTT+TGG 0.399046 7.3:+38991232 MS.gene84605:CDS
CACCATAATCGTTGTTGGTC+CGG 0.399321 7.3:-38991572 None:intergenic
GGCAGGAAGTAGATCTGTTC+AGG 0.408889 7.3:+38992926 MS.gene84605:intron
TCCTTTACAGTAACCAAAGC+TGG 0.413612 7.3:+38989435 MS.gene84605:CDS
ATCTTGATGGGAAATATCTA+TGG 0.417112 7.3:+38988933 MS.gene84605:CDS
GAAGAGGGTAAGATTGGTAT+TGG 0.419917 7.3:+38991151 MS.gene84605:CDS
TCTGACCGTAAACATTTCTC+TGG 0.437901 7.3:-38991391 None:intergenic
CCATCTGAAGAGGGTAAGAT+TGG 0.438944 7.3:+38991145 MS.gene84605:CDS
TGGTTCCTTACTTCATATGT+AGG 0.448885 7.3:-38991451 None:intergenic
ATGGTTGTGTGACCCAGCTT+TGG 0.454145 7.3:-38989448 None:intergenic
AAAGTTCTGTATGCTGAGGC+TGG 0.459437 7.3:+38988776 MS.gene84605:CDS
CCTCCAGAAACAGAGGATTT+GGG 0.461664 7.3:-38991541 None:intergenic
CAAAGCGTGCAAGATCTTGA+TGG 0.464561 7.3:+38988920 MS.gene84605:CDS
CTACCTTCCATGGAGTTCCT+TGG 0.467829 7.3:-38988986 None:intergenic
TCTGTCACCATAATCGTTGT+TGG 0.469184 7.3:-38991577 None:intergenic
GTTCTTACTTCCAAAGAAGA+TGG 0.471620 7.3:+38991496 MS.gene84605:CDS
TATTTGATTGAGTTCTTCAA+TGG 0.476500 7.3:-38989467 None:intergenic
TGAGTCCAGAGAAATGTTTA+CGG 0.479473 7.3:+38991386 MS.gene84605:CDS
CCCAGCTTTGGTTACTGTAA+AGG 0.481051 7.3:-38989436 None:intergenic
GGTAAGATTGGTATTGGAAA+GGG 0.492219 7.3:+38991157 MS.gene84605:CDS
CTCACTCACAGAACCATACT+CGG 0.505777 7.3:+38989372 MS.gene84605:CDS
AAGCCCTCATCTGCATATGT+TGG 0.515996 7.3:-38991121 None:intergenic
CCTGCTACAACTACCTTCCA+TGG 0.518272 7.3:-38988996 None:intergenic
TGTTGTTAATATTGGAGTGA+AGG 0.518877 7.3:+38991687 MS.gene84605:CDS
GGAGTGTTGCAAATGCTAGA+AGG 0.519900 7.3:+38991313 MS.gene84605:CDS
GCAGATGCTGATAAAACTAC+TGG 0.526501 7.3:+38991201 MS.gene84605:CDS
TCTCACCTAAGAAGTGTTTG+AGG 0.528646 7.3:-38991854 None:intergenic
GATTATGGTGACAGACGACT+TGG 0.531122 7.3:+38991585 MS.gene84605:CDS
ACTCCAATGTCATCGTTTGA+TGG 0.532598 7.3:+38991613 MS.gene84605:CDS
AGTCTTGCAATAGTCCCTAA+AGG 0.541322 7.3:-38988839 None:intergenic
TGTTAATATTGGAGTGAAGG+AGG 0.559250 7.3:+38991690 MS.gene84605:CDS
GGGTAAGATTGGTATTGGAA+AGG 0.563253 7.3:+38991156 MS.gene84605:CDS
AAGTTCTGTATGCTGAGGCT+GGG 0.563406 7.3:+38988777 MS.gene84605:CDS
AGAGTTCTTCAATTGTGAGA+AGG 0.570283 7.3:-38989402 None:intergenic
AAAGCGTGCAAGATCTTGAT+GGG 0.571030 7.3:+38988921 MS.gene84605:CDS
AGCTTTGGTTACTGTAAAGG+AGG 0.572506 7.3:-38989433 None:intergenic
TCAACATCTGCTTTGACTAA+GGG 0.573073 7.3:+38991831 MS.gene84605:CDS
GAGAGGAGTCTTCGAGAGCA+AGG 0.573388 7.3:-38991074 None:intergenic
GAACTCAATCAAATATTCAA+AGG 0.576318 7.3:+38989475 MS.gene84605:CDS
TTCACATCTAGAAAGAATGA+AGG 0.586950 7.3:+38991639 MS.gene84605:CDS
CCTTTACAGTAACCAAAGCT+GGG 0.589160 7.3:+38989436 MS.gene84605:CDS
TACTTCCAAAGAAGATGGTG+AGG 0.589884 7.3:+38991501 MS.gene84605:CDS
CCAATCTTACCCTCTTCAGA+TGG 0.593770 7.3:-38991145 None:intergenic
GAAACCAACATATGCAGATG+AGG 0.595214 7.3:+38991117 MS.gene84605:CDS
TGAGGGCTTACCATCTGAAG+AGG 0.596168 7.3:+38991135 MS.gene84605:CDS
GTTTCTGGAGGATATGTCAC+CGG 0.600751 7.3:+38991553 MS.gene84605:CDS
ATCTGCTTACCCTCTTCAGA+TGG 0.600894 7.3:-38991184 None:intergenic
TGGGAAATATCTATGGTCAA+AGG 0.602410 7.3:+38988940 MS.gene84605:CDS
ACTCAAGCCAAGGAACTCCA+TGG 0.606428 7.3:+38988979 MS.gene84605:CDS
TTTAAGATAAAGTCTGTGAG+AGG 0.607200 7.3:-38991091 None:intergenic
ACACCATCAAACGATGACAT+TGG 0.611312 7.3:-38991616 None:intergenic
AAGAAATGCTACTCAAGCCA+AGG 0.611550 7.3:+38988969 MS.gene84605:CDS
AAAGGGCTTACCATCTGAAG+AGG 0.612181 7.3:+38991174 MS.gene84605:CDS
CATTCTGTTTGGTATAGCAG+AGG 0.612193 7.3:+38991243 MS.gene84605:CDS
CCCAAATCCTCTGTTTCTGG+AGG 0.614349 7.3:+38991541 MS.gene84605:CDS
AGGGACTATTGCAAGACTAG+TGG 0.623463 7.3:+38988844 MS.gene84605:CDS
AAACAAAGTTCTGTATGCTG+AGG 0.630952 7.3:+38988772 MS.gene84605:CDS
AGTTACATTGAAAGTTATGG+TGG 0.634199 7.3:+38988739 MS.gene84605:CDS
AAACCAACATATGCAGATGA+GGG 0.635875 7.3:+38991118 MS.gene84605:CDS
AAGCCAAGGAACTCCATGGA+AGG 0.641089 7.3:+38988983 MS.gene84605:CDS
ACTTCCTCAATGTCATTTAG+GGG 0.650557 7.3:-38991664 None:intergenic
GACATATCCTCCAGAAACAG+AGG 0.657900 7.3:-38991548 None:intergenic
CTTCCTCAATGTCATTTAGG+GGG 0.660364 7.3:-38991663 None:intergenic
GAGGGCTTACCATCTGAAGA+GGG 0.666261 7.3:+38991136 MS.gene84605:CDS
AAGGGCTTACCATCTGAAGA+GGG 0.666261 7.3:+38991175 MS.gene84605:CDS
CTTAGTCAAAGCAGATGTTG+AGG 0.666305 7.3:-38991829 None:intergenic
ATTTGCAACACTCCTCCTAG+AGG 0.676162 7.3:-38991304 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATTTGGAATTTTAAAATATT+TGG + chr7.3:38990312-38990331 MS.gene84605:intron 10.0%
!! ATATTTATGTTTATATGTGT+AGG + chr7.3:38991030-38991049 MS.gene84605:intron 15.0%
!!! GAAATTTAAAATTTTGAAAC+AGG + chr7.3:38990376-38990395 MS.gene84605:intron 15.0%
!!! GAAATTTGAAATTTAAAAAC+AGG + chr7.3:38990345-38990364 MS.gene84605:intron 15.0%
!! AAATAGTAATCCTAGAAAAA+AGG - chr7.3:38990223-38990242 None:intergenic 20.0%
!! ACGTAATTATCTAAAGATAA+AGG - chr7.3:38992100-38992119 None:intergenic 20.0%
!! AGTAAAAACTTAAATTTCCA+AGG - chr7.3:38991986-38992005 None:intergenic 20.0%
!! AGTAATTAAAAACGAACAAA+AGG + chr7.3:38992793-38992812 MS.gene84605:intron 20.0%
!! ATAAATACAAACTAGCTATT+TGG + chr7.3:38990064-38990083 MS.gene84605:intron 20.0%
!! TTTAAATATAATACATTCCG+AGG + chr7.3:38990420-38990439 MS.gene84605:intron 20.0%
!!! AACAAGGATTTTGATATATT+TGG + chr7.3:38989281-38989300 MS.gene84605:intron 20.0%
!!! ACAAGGATTTTGATATATTT+GGG + chr7.3:38989282-38989301 MS.gene84605:intron 20.0%
!!! TAGCTTAATTTTTCTTCTTT+TGG - chr7.3:38992663-38992682 None:intergenic 20.0%
!!! TATAAGCTTAATTTTTCCAT+AGG - chr7.3:38992693-38992712 None:intergenic 20.0%
! AAGAAGAAAAATTAAGCTAG+AGG + chr7.3:38992664-38992683 MS.gene84605:intron 25.0%
! AATATCGAAGCAATGAAATT+TGG + chr7.3:38988878-38988897 MS.gene84605:CDS 25.0%
! AGTAAGTTTGCATTAAAAAG+TGG - chr7.3:38992030-38992049 None:intergenic 25.0%
! CAAGGCAAAATTTCTATTAA+AGG - chr7.3:38991968-38991987 None:intergenic 25.0%
! GAAAGATTGAAATGTAAGAA+GGG + chr7.3:38992427-38992446 MS.gene84605:intron 25.0%
! GAACATAGAAAAAAGAAAGA+AGG + chr7.3:38992402-38992421 MS.gene84605:intron 25.0%
! GAACTCAATCAAATATTCAA+AGG + chr7.3:38989475-38989494 MS.gene84605:CDS 25.0%
! TATTTGATTGAGTTCTTCAA+TGG - chr7.3:38989470-38989489 None:intergenic 25.0%
! TCATATGTAGGAAAAATTTG+AGG - chr7.3:38991442-38991461 None:intergenic 25.0%
! TCTTGTTAACTGTATTGAAT+TGG + chr7.3:38992510-38992529 MS.gene84605:intron 25.0%
! TGAAAGATTGAAATGTAAGA+AGG + chr7.3:38992426-38992445 MS.gene84605:intron 25.0%
! TGATTATTAAAGCTATAACG+TGG + chr7.3:38992332-38992351 MS.gene84605:intron 25.0%
! TGTACATGCACATATAATAA+AGG - chr7.3:38992905-38992924 None:intergenic 25.0%
! TTATTATATGTGCATGTACA+TGG + chr7.3:38992905-38992924 MS.gene84605:intron 25.0%
! TTTAACAAATCCATTGTCAA+AGG - chr7.3:38990805-38990824 None:intergenic 25.0%
!! ACTTTGGATTTTGTATTTGT+AGG + chr7.3:38989782-38989801 MS.gene84605:intron 25.0%
!! CTTTAATAGAAATTTTGCCT+TGG + chr7.3:38991966-38991985 MS.gene84605:intron 25.0%
!! GATTGCATAATTTGTATCTA+TGG + chr7.3:38991767-38991786 MS.gene84605:intron 25.0%
!! TTTTTCCTACATATGAAGTA+AGG + chr7.3:38991446-38991465 MS.gene84605:CDS 25.0%
!!! CAATGGATTTGTTAAAGATA+CGG + chr7.3:38990809-38990828 MS.gene84605:intron 25.0%
!!! TGATCTTTTTTCCTTAATCA+TGG + chr7.3:38992478-38992497 MS.gene84605:intron 25.0%
!!! TTTATAGGTTGTACTTTTTC+TGG + chr7.3:38989722-38989741 MS.gene84605:intron 25.0%
!!! TTTGACGCTTTTTTGAAATT+TGG + chr7.3:38990295-38990314 MS.gene84605:intron 25.0%
AACTCATGAAAAAGTTAACC+AGG + chr7.3:38989903-38989922 MS.gene84605:intron 30.0%
AAGAGAGAAAATCAAGAAAG+GGG + chr7.3:38992450-38992469 MS.gene84605:intron 30.0%
AATGATCTAGTAAAAGGTCT+AGG + chr7.3:38990870-38990889 MS.gene84605:intron 30.0%
AGTTACATTGAAAGTTATGG+TGG + chr7.3:38988739-38988758 MS.gene84605:CDS 30.0%
ATCTTGATGGGAAATATCTA+TGG + chr7.3:38988933-38988952 MS.gene84605:CDS 30.0%
ATGCCTAATGATCTAGTAAA+AGG + chr7.3:38990864-38990883 MS.gene84605:intron 30.0%
ATTTCTTAATCATTGCCCTT+AGG - chr7.3:38991945-38991964 None:intergenic 30.0%
CGAAGTTACATTGAAAGTTA+TGG + chr7.3:38988736-38988755 MS.gene84605:CDS 30.0%
CTCGTCGTACATTATAATTA+GGG + chr7.3:38991903-38991922 MS.gene84605:intron 30.0%
GAAGAGAGAAAATCAAGAAA+GGG + chr7.3:38992449-38992468 MS.gene84605:intron 30.0%
GTATATGGTATGAAGTATAC+CGG + chr7.3:38992574-38992593 MS.gene84605:intron 30.0%
TCAACTAGAAACATTCTGTT+TGG + chr7.3:38991232-38991251 MS.gene84605:CDS 30.0%
TCACCAAATCATACAACAAA+AGG - chr7.3:38989510-38989529 None:intergenic 30.0%
TCATATGATCTAAGGGTAAT+GGG + chr7.3:38992740-38992759 MS.gene84605:intron 30.0%
TCTCGTCGTACATTATAATT+AGG + chr7.3:38991902-38991921 MS.gene84605:intron 30.0%
TGAAAACTCATGTCTATCTT+TGG + chr7.3:38989841-38989860 MS.gene84605:intron 30.0%
TGGATGTTCATATGATCTAA+GGG + chr7.3:38992733-38992752 MS.gene84605:intron 30.0%
TGTTGTTAATATTGGAGTGA+AGG + chr7.3:38991687-38991706 MS.gene84605:CDS 30.0%
TTCACATCTAGAAAGAATGA+AGG + chr7.3:38991639-38991658 MS.gene84605:CDS 30.0%
TTCATATGATCTAAGGGTAA+TGG + chr7.3:38992739-38992758 MS.gene84605:intron 30.0%
TTGGATGTTCATATGATCTA+AGG + chr7.3:38992732-38992751 MS.gene84605:intron 30.0%
TTTCTTAATCATTGCCCTTA+GGG - chr7.3:38991944-38991963 None:intergenic 30.0%
! AACTTCCTCAATGTCATTTA+GGG - chr7.3:38991668-38991687 None:intergenic 30.0%
! AGACCTTTTACTAGATCATT+AGG - chr7.3:38990870-38990889 None:intergenic 30.0%
! ATAATTTGTATCTATGGCGA+TGG + chr7.3:38991773-38991792 MS.gene84605:intron 30.0%
! ATTTTCCTCGGTATTTAACT+TGG - chr7.3:38989213-38989232 None:intergenic 30.0%
! GAGGAAGTTGTTGTTAATAT+TGG + chr7.3:38991679-38991698 MS.gene84605:CDS 30.0%
! TTCTACCTTTTGCTTCTTTA+GGG - chr7.3:38992976-38992995 None:intergenic 30.0%
! TTTAAGATAAAGTCTGTGAG+AGG - chr7.3:38991094-38991113 None:intergenic 30.0%
! TTTCTACCTTTTGCTTCTTT+AGG - chr7.3:38992977-38992996 None:intergenic 30.0%
!! ACGACGAGATTTTGATAATT+TGG - chr7.3:38991891-38991910 None:intergenic 30.0%
!! CATCCTTTTGTTGTATGATT+TGG + chr7.3:38989504-38989523 MS.gene84605:intron 30.0%
!! GCTTTTTAGCAGGTTTTTAT+AGG + chr7.3:38989707-38989726 MS.gene84605:intron 30.0%
!! GTTGTATGATTTGGTGATTA+GGG + chr7.3:38989513-38989532 MS.gene84605:intron 30.0%
!! TGTTGTATGATTTGGTGATT+AGG + chr7.3:38989512-38989531 MS.gene84605:intron 30.0%
!!! CTGTTTTGATTGGTAAAATC+TGG - chr7.3:38991474-38991493 None:intergenic 30.0%
!!! TCTCATTTAGCCTTTTTTCT+AGG + chr7.3:38990210-38990229 MS.gene84605:intron 30.0%
AAAACCTGCTAAAAAGCCAA+AGG - chr7.3:38989704-38989723 None:intergenic 35.0%
AAAACGAACAAAAGGTGAGA+AGG + chr7.3:38992801-38992820 MS.gene84605:intron 35.0%
AAACAAAGTTCTGTATGCTG+AGG + chr7.3:38988772-38988791 MS.gene84605:CDS 35.0%
AAACCAACATATGCAGATGA+GGG + chr7.3:38991118-38991137 MS.gene84605:CDS 35.0%
AAACGAACAAAAGGTGAGAA+GGG + chr7.3:38992802-38992821 MS.gene84605:intron 35.0%
AAATCCATTGTCAAAGGAAC+TGG - chr7.3:38990799-38990818 None:intergenic 35.0%
AACACTACTTATCAGCAAGA+AGG + chr7.3:38990941-38990960 MS.gene84605:intron 35.0%
AATCCATTGTCAAAGGAACT+GGG - chr7.3:38990798-38990817 None:intergenic 35.0%
ACACTTTAACCAATGCCTTA+AGG + chr7.3:38992057-38992076 MS.gene84605:intron 35.0%
AGAGTTCTTCAATTGTGAGA+AGG - chr7.3:38989405-38989424 None:intergenic 35.0%
AGCTTCTTAACATTGCCTTT+AGG + chr7.3:38988824-38988843 MS.gene84605:CDS 35.0%
ATGGTTTCTCGCTGAAATTA+AGG + chr7.3:38989105-38989124 MS.gene84605:intron 35.0%
ATTAAGCTAGAGGAAACCTA+TGG + chr7.3:38992674-38992693 MS.gene84605:intron 35.0%
CAAAAATTTCCGAGGAACAA+TGG + chr7.3:38989086-38989105 MS.gene84605:intron 35.0%
CACTTTAACCAATGCCTTAA+GGG + chr7.3:38992058-38992077 MS.gene84605:intron 35.0%
CATATGATCTAAGGGTAATG+GGG + chr7.3:38992741-38992760 MS.gene84605:intron 35.0%
CTAATGCATGCTTTAACAGA+TGG + chr7.3:38992615-38992634 MS.gene84605:intron 35.0%
CTATAACGTGGAACATATAG+AGG + chr7.3:38992344-38992363 MS.gene84605:intron 35.0%
GAAACAAGTCACCATGATTA+AGG - chr7.3:38992492-38992511 None:intergenic 35.0%
GATCACAAATTAGACAGAAC+CGG - chr7.3:38992596-38992615 None:intergenic 35.0%
GCTTCTTAACATTGCCTTTA+GGG + chr7.3:38988825-38988844 MS.gene84605:CDS 35.0%
GGAAGAGAGAAAATCAAGAA+AGG + chr7.3:38992448-38992467 MS.gene84605:intron 35.0%
GTTCTTACTTCCAAAGAAGA+TGG + chr7.3:38991496-38991515 MS.gene84605:CDS 35.0%
TAGTTTGGTCTAGTAGCTAA+GGG + chr7.3:38992179-38992198 MS.gene84605:intron 35.0%
TATGTGTGTGTGTGTGTATA+TGG + chr7.3:38992559-38992578 MS.gene84605:intron 35.0%
TCAACATCTGCTTTGACTAA+GGG + chr7.3:38991831-38991850 MS.gene84605:CDS 35.0%
TCATGTCCTGGAAAAATAGT+TGG - chr7.3:38990592-38990611 None:intergenic 35.0%
TGAGTCCAGAGAAATGTTTA+CGG + chr7.3:38991386-38991405 MS.gene84605:CDS 35.0%
TGCAGGATTATTCTGTACTT+TGG + chr7.3:38989766-38989785 MS.gene84605:intron 35.0%
TGGGAAATATCTATGGTCAA+AGG + chr7.3:38988940-38988959 MS.gene84605:CDS 35.0%
TGGTTCCTTACTTCATATGT+AGG - chr7.3:38991454-38991473 None:intergenic 35.0%
TGTTAATATTGGAGTGAAGG+AGG + chr7.3:38991690-38991709 MS.gene84605:CDS 35.0%
! ACTTCCTCAATGTCATTTAG+GGG - chr7.3:38991667-38991686 None:intergenic 35.0%
! ATGTAGGAAAAATTTGAGGC+TGG - chr7.3:38991438-38991457 None:intergenic 35.0%
! CAACTTCCTCAATGTCATTT+AGG - chr7.3:38991669-38991688 None:intergenic 35.0%
! CATTGTTCCTCGGAAATTTT+TGG - chr7.3:38989088-38989107 None:intergenic 35.0%
! CTTTTCCAAGTTAAATACCG+AGG + chr7.3:38989205-38989224 MS.gene84605:intron 35.0%
! GGTAAGATTGGTATTGGAAA+GGG + chr7.3:38991157-38991176 MS.gene84605:CDS 35.0%
! TAATGACAACATGTTTTCCG+AGG - chr7.3:38989239-38989258 None:intergenic 35.0%
! TATAGCAGAGGAAGATTTTG+CGG + chr7.3:38991255-38991274 MS.gene84605:CDS 35.0%
! TCTACCTTTTGCTTCTTTAG+GGG - chr7.3:38992975-38992994 None:intergenic 35.0%
! TCTTTTCAAAGCGTGTAACA+AGG + chr7.3:38989265-38989284 MS.gene84605:intron 35.0%
!! AGTTTTCTCACTTTTCCTCT+AGG + chr7.3:38991289-38991308 MS.gene84605:CDS 35.0%
!! TTGCAACCAACTATTTTTCC+AGG + chr7.3:38990583-38990602 MS.gene84605:intron 35.0%
!!! AGGTTGTACTTTTTCTGGTT+CGG + chr7.3:38989727-38989746 MS.gene84605:intron 35.0%
!!! GTAAGAACAGCTGTTTTGAT+TGG - chr7.3:38991484-38991503 None:intergenic 35.0%
!!! GTTGTATGTTGTTTTGTTGC+AGG + chr7.3:38989749-38989768 MS.gene84605:intron 35.0%
!!! TTTCTTCTTTTGGCTTCTTC+AGG - chr7.3:38992653-38992672 None:intergenic 35.0%
AAAGAATCAAGCTGAGTTGC+TGG + chr7.3:38989593-38989612 MS.gene84605:intron 40.0%
AAAGCGTGCAAGATCTTGAT+GGG + chr7.3:38988921-38988940 MS.gene84605:CDS 40.0%
AAATACCGAGGAAATTTCCG+AGG - chr7.3:38990560-38990579 None:intergenic 40.0%
AACCAGGTCATGTCTATCTT+TGG + chr7.3:38989919-38989938 MS.gene84605:intron 40.0%
AAGAAATGCTACTCAAGCCA+AGG + chr7.3:38988969-38988988 MS.gene84605:CDS 40.0%
AAGAGAGTGACAGTCATGAA+GGG + chr7.3:38992825-38992844 MS.gene84605:intron 40.0%
AAGTTCCTCGGAAATTTCCT+CGG + chr7.3:38990552-38990571 MS.gene84605:intron 40.0%
AATGCTAATGAGTGCCCTTA+AGG - chr7.3:38992075-38992094 None:intergenic 40.0%
ACACCATCAAACGATGACAT+TGG - chr7.3:38991619-38991638 None:intergenic 40.0%
ACTACTTATCAGCAAGAAGG+AGG + chr7.3:38990944-38990963 MS.gene84605:intron 40.0%
ACTCCAATGTCATCGTTTGA+TGG + chr7.3:38991613-38991632 MS.gene84605:CDS 40.0%
AGAAGGAAAATTGCCGAGTA+TGG - chr7.3:38989388-38989407 None:intergenic 40.0%
AGTCTTGCAATAGTCCCTAA+AGG - chr7.3:38988842-38988861 None:intergenic 40.0%
ATACCGAGGAAAAAGTTCCT+CGG - chr7.3:38989135-38989154 None:intergenic 40.0%
ATACCGAGGAAAATGTTCCT+CGG + chr7.3:38989219-38989238 MS.gene84605:intron 40.0%
ATCAGAAATGCCTTTGTGGA+AGG + chr7.3:38990748-38990767 MS.gene84605:intron 40.0%
ATGAGTTCCTCGGAAAAAGT+TGG + chr7.3:38990608-38990627 MS.gene84605:intron 40.0%
ATTCCGACCAAAAATTTCCG+AGG + chr7.3:38989078-38989097 MS.gene84605:intron 40.0%
ATTCCGAGCACAAAATTCCT+CGG - chr7.3:38990659-38990678 None:intergenic 40.0%
ATTCCGAGGACATATTTCCT+CGG + chr7.3:38990523-38990542 MS.gene84605:intron 40.0%
ATTGGAGTGAAGGAGGTAAA+GGG + chr7.3:38991697-38991716 MS.gene84605:intron 40.0%
CATTCTGTTTGGTATAGCAG+AGG + chr7.3:38991243-38991262 MS.gene84605:CDS 40.0%
CCTTTACAGTAACCAAAGCT+GGG + chr7.3:38989436-38989455 MS.gene84605:CDS 40.0%
CTCAACATCTGCTTTGACTA+AGG + chr7.3:38991830-38991849 MS.gene84605:CDS 40.0%
CTTAGTCAAAGCAGATGTTG+AGG - chr7.3:38991832-38991851 None:intergenic 40.0%
GAAACCAACATATGCAGATG+AGG + chr7.3:38991117-38991136 MS.gene84605:CDS 40.0%
GAAGAGGGTAAGATTGGTAT+TGG + chr7.3:38991151-38991170 MS.gene84605:CDS 40.0%
GCAGATGCTGATAAAACTAC+TGG + chr7.3:38991201-38991220 MS.gene84605:CDS 40.0%
GCTGAAATTAAGGATTTCCG+AGG + chr7.3:38989115-38989134 MS.gene84605:intron 40.0%
GGAATTTCAGTGCTTTCTTG+TGG + chr7.3:38990674-38990693 MS.gene84605:intron 40.0%
GGTTACTGTAAAGGAGGATT+TGG - chr7.3:38989430-38989449 None:intergenic 40.0%
GTAGTTTGGTCTAGTAGCTA+AGG + chr7.3:38992178-38992197 MS.gene84605:intron 40.0%
TACTTCCAAAGAAGATGGTG+AGG + chr7.3:38991501-38991520 MS.gene84605:CDS 40.0%
TATATGTGCATGTACATGGC+AGG + chr7.3:38992909-38992928 MS.gene84605:intron 40.0%
TATCCCCCTAAAGAAGCAAA+AGG + chr7.3:38992968-38992987 MS.gene84605:CDS 40.0%
TATTGGAGTGAAGGAGGTAA+AGG + chr7.3:38991696-38991715 MS.gene84605:intron 40.0%
TCCTCGGAATTAAGATGTGA+CGG - chr7.3:38990513-38990532 None:intergenic 40.0%
TCCTTTACAGTAACCAAAGC+TGG + chr7.3:38989435-38989454 MS.gene84605:CDS 40.0%
TCGGAAATTTCCTCGGTATT+TGG + chr7.3:38990559-38990578 MS.gene84605:intron 40.0%
TCTGACCGTAAACATTTCTC+TGG - chr7.3:38991394-38991413 None:intergenic 40.0%
TCTGTCACCATAATCGTTGT+TGG - chr7.3:38991580-38991599 None:intergenic 40.0%
TGGTATCAGAAATGCCTTTG+TGG + chr7.3:38990744-38990763 MS.gene84605:intron 40.0%
TGTGACAATACCTTCCACAA+AGG - chr7.3:38990761-38990780 None:intergenic 40.0%
TTGTAGTGAAGATACTGCAC+CGG - chr7.3:38989046-38989065 None:intergenic 40.0%
TTTCCGAGGAAATATGTCCT+CGG - chr7.3:38990529-38990548 None:intergenic 40.0%
TTTCCTTTGCTTGTTCTTGC+TGG + chr7.3:38989631-38989650 MS.gene84605:intron 40.0%
! AGCTTTGGTTACTGTAAAGG+AGG - chr7.3:38989436-38989455 None:intergenic 40.0%
! CTACCTTTTGCTTCTTTAGG+GGG - chr7.3:38992974-38992993 None:intergenic 40.0%
! CTTCCTCAATGTCATTTAGG+GGG - chr7.3:38991666-38991685 None:intergenic 40.0%
! GACTGTTTTCTTGTGGCTAT+TGG + chr7.3:38989653-38989672 MS.gene84605:intron 40.0%
! GGGTAAGATTGGTATTGGAA+AGG + chr7.3:38991156-38991175 MS.gene84605:CDS 40.0%
! TCATGAAGGGTGTGTAATCT+TGG + chr7.3:38992838-38992857 MS.gene84605:intron 40.0%
! TTTCCGAGGAACATTTTCCT+CGG - chr7.3:38989225-38989244 None:intergenic 40.0%
! TTTCCGAGGAATTTTGTGCT+CGG + chr7.3:38990653-38990672 MS.gene84605:intron 40.0%
!! TCTCACCTAAGAAGTGTTTG+AGG - chr7.3:38991857-38991876 None:intergenic 40.0%
!! TTTCCGAGGAACTTTTTCCT+CGG + chr7.3:38989129-38989148 MS.gene84605:intron 40.0%
!! TTTCTCACTTTTCCTCTAGG+AGG + chr7.3:38991292-38991311 MS.gene84605:CDS 40.0%
!!! GGAAGTGTGTGAGTCTTTTT+TGG + chr7.3:38990724-38990743 MS.gene84605:intron 40.0%
!!! GTTCCTCGGAAATTTTTGGT+CGG - chr7.3:38989084-38989103 None:intergenic 40.0%
AAAGGGCTTACCATCTGAAG+AGG + chr7.3:38991174-38991193 MS.gene84605:CDS 45.0%
AAAGTTCTGTATGCTGAGGC+TGG + chr7.3:38988776-38988795 MS.gene84605:CDS 45.0%
AAGCCCTCATCTGCATATGT+TGG - chr7.3:38991124-38991143 None:intergenic 45.0%
AAGGGCCTCAAACACTTCTT+AGG + chr7.3:38991849-38991868 MS.gene84605:CDS 45.0%
AAGGGCTTACCATCTGAAGA+GGG + chr7.3:38991175-38991194 MS.gene84605:CDS 45.0%
AAGTTCTGTATGCTGAGGCT+GGG + chr7.3:38988777-38988796 MS.gene84605:CDS 45.0%
AATGAGTGCCCTTAAGGCAT+TGG - chr7.3:38992069-38992088 None:intergenic 45.0%
ACTGAACATCGATGACACAC+CGG + chr7.3:38989024-38989043 MS.gene84605:intron 45.0%
ACTTCTATGTCAGCCACAAC+AGG + chr7.3:38990468-38990487 MS.gene84605:intron 45.0%
AGAAGTGACTAGCATTTCCG+AGG - chr7.3:38990454-38990473 None:intergenic 45.0%
AGCCAAAGATAGACATGACC+TGG - chr7.3:38989924-38989943 None:intergenic 45.0%
AGCGAGAAACCATTGTTCCT+CGG - chr7.3:38989098-38989117 None:intergenic 45.0%
AGGGACTATTGCAAGACTAG+TGG + chr7.3:38988844-38988863 MS.gene84605:CDS 45.0%
AGTCCAGCAAGAACAAGCAA+AGG - chr7.3:38989637-38989656 None:intergenic 45.0%
ATCTGCTTACCCTCTTCAGA+TGG - chr7.3:38991187-38991206 None:intergenic 45.0%
ATTCCGAGGACAAAGTTCCT+CGG + chr7.3:38990434-38990453 MS.gene84605:intron 45.0%
ATTCTGACATGGACATACCG+AGG - chr7.3:38989149-38989168 None:intergenic 45.0%
ATTGTCAAAGGAACTGGGAC+AGG - chr7.3:38990793-38990812 None:intergenic 45.0%
ATTTGCAACACTCCTCCTAG+AGG - chr7.3:38991307-38991326 None:intergenic 45.0%
CAAAGCGTGCAAGATCTTGA+TGG + chr7.3:38988920-38988939 MS.gene84605:CDS 45.0%
CAAGACCTCACCATCTTCTT+TGG - chr7.3:38991509-38991528 None:intergenic 45.0%
CACCATAATCGTTGTTGGTC+CGG - chr7.3:38991575-38991594 None:intergenic 45.0%
CCAAACTACCTACTACTGCT+TGG - chr7.3:38992167-38992186 None:intergenic 45.0%
CCAAGCAGTAGTAGGTAGTT+TGG + chr7.3:38992164-38992183 MS.gene84605:intron 45.0%
CCAATCTTACCCTCTTCAGA+TGG - chr7.3:38991148-38991167 None:intergenic 45.0%
CCATCTGAAGAGGGTAAGAT+TGG + chr7.3:38991145-38991164 MS.gene84605:CDS 45.0%
CCTCCAGAAACAGAGGATTT+GGG - chr7.3:38991544-38991563 None:intergenic 45.0%
CCTCGGAAACAAAAGTTCCT+CGG + chr7.3:38990540-38990559 MS.gene84605:intron 45.0%
CTAGGTTTACTGCAGACGAA+TGG + chr7.3:38990888-38990907 MS.gene84605:intron 45.0%
CTCACTCACAGAACCATACT+CGG + chr7.3:38989372-38989391 MS.gene84605:CDS 45.0%
GAAGAGAGTGACAGTCATGA+AGG + chr7.3:38992824-38992843 MS.gene84605:intron 45.0%
GACATATCCTCCAGAAACAG+AGG - chr7.3:38991551-38991570 None:intergenic 45.0%
GATCCCAAATCCTCTGTTTC+TGG + chr7.3:38991538-38991557 MS.gene84605:CDS 45.0%
GATTATGGTGACAGACGACT+TGG + chr7.3:38991585-38991604 MS.gene84605:CDS 45.0%
GGAAATCGTCCAAATCTCCT+CGG - chr7.3:38990638-38990657 None:intergenic 45.0%
GTTGGTATTCCGAGGAGATT+TGG + chr7.3:38990626-38990645 MS.gene84605:intron 45.0%
TCCTACTTGCAAAGTCAGTG+TGG + chr7.3:38989178-38989197 MS.gene84605:intron 45.0%
TCCTCCAGAAACAGAGGATT+TGG - chr7.3:38991545-38991564 None:intergenic 45.0%
TGGTTGCAATCCAAATACCG+AGG - chr7.3:38990572-38990591 None:intergenic 45.0%
TGTCCCAGTTCCTTTGACAA+TGG + chr7.3:38990792-38990811 MS.gene84605:intron 45.0%
TTCGCTTGTTTGAGTGACAG+TGG + chr7.3:38989676-38989695 MS.gene84605:intron 45.0%
TTGAGTGACAGTGGTTCCTT+TGG + chr7.3:38989685-38989704 MS.gene84605:intron 45.0%
TTTCCAGGACATGAGTTCCT+CGG + chr7.3:38990598-38990617 MS.gene84605:intron 45.0%
TTTCCGAGGAACTTTGTCCT+CGG - chr7.3:38990440-38990459 None:intergenic 45.0%
! CCCAGCTTTGGTTACTGTAA+AGG - chr7.3:38989439-38989458 None:intergenic 45.0%
! CTGAGTTGCTGGACTGTTTT+TGG + chr7.3:38989604-38989623 MS.gene84605:intron 45.0%
! CTTGCTGGACTGTTTTCTTG+TGG + chr7.3:38989646-38989665 MS.gene84605:intron 45.0%
! GTTTCTGGAGGATATGTCAC+CGG + chr7.3:38991553-38991572 MS.gene84605:CDS 45.0%
!! ACACTGACTTTGCAAGTAGG+AGG - chr7.3:38989179-38989198 None:intergenic 45.0%
!! CGGAAAAAGTTGGTATTCCG+AGG + chr7.3:38990618-38990637 MS.gene84605:intron 45.0%
!! CGGAATACCAACTTTTTCCG+AGG - chr7.3:38990618-38990637 None:intergenic 45.0%
!! GCTTCTTCAGGTTGCTAACT+GGG - chr7.3:38992641-38992660 None:intergenic 45.0%
!! GGAGTGTTGCAAATGCTAGA+AGG + chr7.3:38991313-38991332 MS.gene84605:CDS 45.0%
!! TCTAAGGGTAATGGGGAGTA+AGG + chr7.3:38992748-38992767 MS.gene84605:intron 45.0%
!! TGTGGAAGGTATTGTCACAG+TGG + chr7.3:38990762-38990781 MS.gene84605:intron 45.0%
!!! GGTTCCTTTGGCTTTTTAGC+AGG + chr7.3:38989697-38989716 MS.gene84605:intron 45.0%
AAGCCAAGGAACTCCATGGA+AGG + chr7.3:38988983-38989002 MS.gene84605:CDS 50.0%
ACTCAAGCCAAGGAACTCCA+TGG + chr7.3:38988979-38988998 MS.gene84605:CDS 50.0%
ACTCCTGTCCAAGCAGTAGT+AGG + chr7.3:38992156-38992175 MS.gene84605:intron 50.0%
AGAGACAGAGTGAGACAGAG+AGG - chr7.3:38989316-38989335 None:intergenic 50.0%
ATGGTTGTGTGACCCAGCTT+TGG - chr7.3:38989451-38989470 None:intergenic 50.0%
CACCGGACCAACAACGATTA+TGG + chr7.3:38991570-38991589 MS.gene84605:CDS 50.0%
CCATGGAAGGTAGTTGTAGC+AGG + chr7.3:38988996-38989015 MS.gene84605:intron 50.0%
CCTGCTACAACTACCTTCCA+TGG - chr7.3:38988999-38989018 None:intergenic 50.0%
CTACCTACTACTGCTTGGAC+AGG - chr7.3:38992162-38992181 None:intergenic 50.0%
CTACCTTCCATGGAGTTCCT+TGG - chr7.3:38988989-38989008 None:intergenic 50.0%
GAGGAGCAGAGATTCTGACA+TGG - chr7.3:38989160-38989179 None:intergenic 50.0%
GAGGGCTTACCATCTGAAGA+GGG + chr7.3:38991136-38991155 MS.gene84605:CDS 50.0%
GCCGTCACATCTTAATTCCG+AGG + chr7.3:38990509-38990528 MS.gene84605:intron 50.0%
GGAGATTTGGACGATTTCCG+AGG + chr7.3:38990639-38990658 MS.gene84605:intron 50.0%
GGCAGGAAGTAGATCTGTTC+AGG + chr7.3:38992926-38992945 MS.gene84605:intron 50.0%
GGGTGTGTAATCTTGGCAAC+TGG + chr7.3:38992845-38992864 MS.gene84605:intron 50.0%
GGTCCCCCTAAATGACATTG+AGG + chr7.3:38991660-38991679 MS.gene84605:CDS 50.0%
GTATCTATGGCGATGGTGCA+GGG + chr7.3:38991780-38991799 MS.gene84605:intron 50.0%
GTCTCTCTCTCTCTCTCTCA+AGG + chr7.3:38989330-38989349 MS.gene84605:intron 50.0%
TGAGGGCTTACCATCTGAAG+AGG + chr7.3:38991135-38991154 MS.gene84605:CDS 50.0%
TGTATCTATGGCGATGGTGC+AGG + chr7.3:38991779-38991798 MS.gene84605:intron 50.0%
TTTCCGAGGAACTCATGTCC+TGG - chr7.3:38990604-38990623 None:intergenic 50.0%
! AGAAGGAGGCATGCTTTCTC+TGG + chr7.3:38990958-38990977 MS.gene84605:intron 50.0%
! CTTGCTGACTAGTGCCCTAA+GGG + chr7.3:38991927-38991946 MS.gene84605:intron 50.0%
! TCTTGCTGACTAGTGCCCTA+AGG + chr7.3:38991926-38991945 MS.gene84605:intron 50.0%
!! CCCAAATCCTCTGTTTCTGG+AGG + chr7.3:38991541-38991560 MS.gene84605:CDS 50.0%
!! CCGAGGAACTTTTGTTTCCG+AGG - chr7.3:38990543-38990562 None:intergenic 50.0%
!! GCCACACTGACTTTGCAAGT+AGG - chr7.3:38989182-38989201 None:intergenic 50.0%
!! GGCTTCTTCAGGTTGCTAAC+TGG - chr7.3:38992642-38992661 None:intergenic 50.0%
CCTACACTTCCAGTCGTCAC+AGG - chr7.3:38990706-38990725 None:intergenic 55.0%
GAGAGGAGTCTTCGAGAGCA+AGG - chr7.3:38991077-38991096 None:intergenic 55.0%
TGGTGCTTACCTGTGACGAC+TGG + chr7.3:38990694-38990713 MS.gene84605:intron 55.0%
! CCTGTGACGACTGGAAGTGT+AGG + chr7.3:38990703-38990722 MS.gene84605:intron 55.0%
TGTGACGGCTGACACCAGAC+TGG - chr7.3:38990498-38990517 None:intergenic 60.0%
CCAGACTGGCGCTCCTGTTG+TGG - chr7.3:38990484-38990503 None:intergenic 65.0%
!! CCACAACAGGAGCGCCAGTC+TGG + chr7.3:38990481-38990500 MS.gene84605:intron 65.0%


Chromosome Type Strat End Strand Name
chr7.3 gene 38988728 38993001 38988728 ID=MS.gene84605
chr7.3 mRNA 38988728 38993001 38988728 ID=MS.gene84605.t1;Parent=MS.gene84605
chr7.3 exon 38988728 38989004 38988728 ID=MS.gene84605.t1.exon1;Parent=MS.gene84605.t1
chr7.3 CDS 38988728 38989004 38988728 ID=cds.MS.gene84605.t1;Parent=MS.gene84605.t1
chr7.3 exon 38989357 38989496 38989357 ID=MS.gene84605.t1.exon2;Parent=MS.gene84605.t1
chr7.3 CDS 38989357 38989496 38989357 ID=cds.MS.gene84605.t1;Parent=MS.gene84605.t1
chr7.3 exon 38991052 38991711 38991052 ID=MS.gene84605.t1.exon3;Parent=MS.gene84605.t1
chr7.3 CDS 38991052 38991711 38991052 ID=cds.MS.gene84605.t1;Parent=MS.gene84605.t1
chr7.3 exon 38991801 38991870 38991801 ID=MS.gene84605.t1.exon4;Parent=MS.gene84605.t1
chr7.3 CDS 38991801 38991870 38991801 ID=cds.MS.gene84605.t1;Parent=MS.gene84605.t1
chr7.3 exon 38992931 38993001 38992931 ID=MS.gene84605.t1.exon5;Parent=MS.gene84605.t1
chr7.3 CDS 38992931 38993001 38992931 ID=cds.MS.gene84605.t1;Parent=MS.gene84605.t1
Gene Sequence

>MS.gene84605

ATGGGTAACGAAGTTACATTGAAAGTTATGGTGGACAAAGAAAGAAACAAAGTTCTGTATGCTGAGGCTGGGAATGATTTTGTTGATGCTCTCTTCAGCTTCTTAACATTGCCTTTAGGGACTATTGCAAGACTAGTGGCTGCAGAATCAAATATCGAAGCAATGAAATTTGGCAGCATTAGCTCACTTTATCAAAGCGTGCAAGATCTTGATGGGAAATATCTATGGTCAAAGGAATGCAAAGAAATGCTACTCAAGCCAAGGAACTCCATGGAAGGTAGTTGTAGCAGGCTCAAACTGAACATCGATGACACACCGGTGCAGTATCTTCACTACAAGAAAGCTTGAGTATTCCGACCAAAAATTTCCGAGGAACAATGGTTTCTCGCTGAAATTAAGGATTTCCGAGGAACTTTTTCCTCGGTATGTCCATGTCAGAATCTCTGCTCCTCCTACTTGCAAAGTCAGTGTGGCGCGCTTTTCCAAGTTAAATACCGAGGAAAATGTTCCTCGGAAAACATGTTGTCATTATCAAATTCTTTTCAAAGCGTGTAACAAGGATTTTGATATATTTGGGAGCACATTCCTCTCTGTCTCACTCTGTCTCTCTCTCTCTCTCTCAAGGTTAGATCTAACGCTTCTCACTCACTCACAGAACCATACTCGGCAATTTTCCTTCTCACAATTGAAGAACTCTCACCAAATCCTCCTTTACAGTAACCAAAGCTGGGTCACACAACCATTGAAGAACTCAATCAAATATTCAAAGGTATTCTCATCCTTTTGTTGTATGATTTGGTGATTAGGGTTTATAATCTTTGAAATATTTTTAGTGATTCTTCTCAAATCTTTCAATAGAAGCTAAAAAGAATCAAGCTGAGTTGCTGGACTGTTTTTGGACAGTTTCCTTTGCTTGTTCTTGCTGGACTGTTTTCTTGTGGCTATTGGTTCGCTTGTTTGAGTGACAGTGGTTCCTTTGGCTTTTTAGCAGGTTTTTATAGGTTGTACTTTTTCTGGTTCGGTTGTATGTTGTTTTGTTGCAGGATTATTCTGTACTTTGGATTTTGTATTTGTAGGCATCAATTCTCTTTTGAAACGTCTAATTAAGAAGAATGAAAACTCATGTCTATCTTTGGCTCACTATTCTTTCTTTCTGTTTAAGAAGAATGAATGAAAACTCATGAAAAAGTTAACCAGGTCATGTCTATCTTTGGCTCACTATTCTTTCTTTCTGTTTTATATAATGTTAATTTTTAATTTATTAAAGAATTAAATTTGACGTGAAGAAAATATTTTCACATACAAACTAGCTAATTTTCAAAAAAATAAAATAAAAATAAATACAAACTAGCTATTTGGAGTTGATTCAATATTGAAATTAGCTTCATACACTTGATTCAATATTGAAATTGAAGTTGTGATTAACTTGCTTTTTTTTATCACTATATGTATTGTTGAATTGAGCTTTAATGTAACTTGTACTCTCATTTAGCCTTTTTTCTAGGATTACTATTTATTTTGAAATGCATATGTGTGCTACTGCTATTTTGAAATTTGAAATTTAAAATTTGACGCTTTTTTGAAATTTGGAATTTTAAAATATTTGGCTCTTCTTTAGAAATTTGAAATTTAAAAACAGGCACTTTTTGAAATTTAAAATTTTGAAACAGGAAAATAATTATAATTTTTTTTTTTAAATATAATACATTCCGAGGACAAAGTTCCTCGGAAATGCTAGTCACTTCTATGTCAGCCACAACAGGAGCGCCAGTCTGGTGTCAGCCGTCACATCTTAATTCCGAGGACATATTTCCTCGGAAACAAAAGTTCCTCGGAAATTTCCTCGGTATTTGGATTGCAACCAACTATTTTTCCAGGACATGAGTTCCTCGGAAAAAGTTGGTATTCCGAGGAGATTTGGACGATTTCCGAGGAATTTTGTGCTCGGAATTTCAGTGCTTTCTTGTGGTGCTTACCTGTGACGACTGGAAGTGTAGGAAGTGTGTGAGTCTTTTTTGGTATCAGAAATGCCTTTGTGGAAGGTATTGTCACAGTGGAGTTGCCTGTCCCAGTTCCTTTGACAATGGATTTGTTAAAGATACGGCTAGTTTTATAATTCATGACGATCTTTCTGTAATGCCTAATGATCTAGTAAAAGGTCTAGGTTTACTGCAGACGAATGGAATCAATGACATTGCAGATATCGAGAGAAAAACACTACTTATCAGCAAGAAGGAGGCATGCTTTCTCTGGATTTTCTAAATTTCGATATTTTTATCACTGATGTTGATTTTTTAAATGAATATTTATGTTTATATGTGTAGGTAGTTGATCTTCTCAAGTTGTCCTTGCTCTCGAAGACTCCTCTCACAGACTTTATCTTAAAGAAGAAACCAACATATGCAGATGAGGGCTTACCATCTGAAGAGGGTAAGATTGGTATTGGAAAGGGCTTACCATCTGAAGAGGGTAAGCAGATGCTGATAAAACTACTGGTTAGAAAATCAACTAGAAACATTCTGTTTGGTATAGCAGAGGAAGATTTTGCGGACTTTCTTTTCAGTTTTCTCACTTTTCCTCTAGGAGGAGTGTTGCAAATGCTAGAAGGATTCTCTTCTTTAAGCTGCATTGATATTTTATATAAAAGCATGACTGAGTTGAGTCCAGAGAAATGTTTACGGTCAGATGAACTTAAAAACAAACTTAGCCAGCCTCAAATTTTTCCTACATATGAAGTAAGGAACCAGATTTTACCAATCAAAACAGCTGTTCTTACTTCCAAAGAAGATGGTGAGGTCTTGAAATTTGTTGATCCCAAATCCTCTGTTTCTGGAGGATATGTCACCGGACCAACAACGATTATGGTGACAGACGACTTGGTTGTGACTCCAATGTCATCGTTTGATGGTGTTTCACATCTAGAAAGAATGAAGGTCCCCCTAAATGACATTGAGGAAGTTGTTGTTAATATTGGAGTGAAGGAGGTAAAGGGATTGTCTGAGACATTATTTAGCATAATTTTTAATTTTAACATTTCTCGATTGCATAATTTGTATCTATGGCGATGGTGCAGGGTCTCAACATACTAAAAGCTTCATTGACCTCAACATCTGCTTTGACTAAGGGCCTCAAACACTTCTTAGGTGAGATCAATATTCAACCAAATTATCAAAATCTCGTCGTACATTATAATTAGGGTCTTGCTGACTAGTGCCCTAAGGGCAATGATTAAGAAATCCTTTAATAGAAATTTTGCCTTGGAAATTTAAGTTTTTACTTTTGTGTTATCAGTAATTACACCACTTTTTAATGCAAACTTACTAATTTTAACACTTTAACCAATGCCTTAAGGGCACTCATTAGCATTCTCCTTTATCTTTAGATAATTACGTTGTGCTTTTATTCAAAAGTCTCATGTGAAAGACTGTACTCCTGTCCAAGCAGTAGTAGGTAGTTTGGTCTAGTAGCTAAGGGAAACTGAATGAGTTAAGTACTATAACATTTGAGAGTAATTTAGTCTCTGATAATTTTTTGTTGATTTTTCTGTAAAATATTCTGAATACATCAATGATTTATTTACATTTATTATGATGTCATGTACGTATGATTATTAAAGCTATAACGTGGAACATATAGAGGATAGTTAATGTTGAAAAATTATAGTAATTAAAAATGAACATAGAAAAAAGAAAGAAGGATGAAAGATTGAAATGTAAGAAGGGAAGAGAGAAAATCAAGAAAGGGGAGAAATGATCTTTTTTCCTTAATCATGGTGACTTGTTTCTTGTTAACTGTATTGAATTGGTACTCAATGCTAAATTTACTCAATTTTATGTGTGTGTGTGTGTATATGGTATGAAGTATACCGGTTCTGTCTAATTTGTGATCTAATGCATGCTTTAACAGATGGCCCAGTTAGCAACCTGAAGAAGCCAAAAGAAGAAAAATTAAGCTAGAGGAAACCTATGGAAAAATTAAGCTTATAACTGTATGTATATTGGATATTGGATGTTCATATGATCTAAGGGTAATGGGGAGTAAGGACAGTTAATGTCAAGAAAATTAAGTAATTAAAAACGAACAAAAGGTGAGAAGGGAAGAGAGTGACAGTCATGAAGGGTGTGTAATCTTGGCAACTGGTTTGTTAAATAATTTTGAATAAGTACTAACTACTCCTTTATTATATGTGCATGTACATGGCAGGAAGTAGATCTGTTCAGGCTAATTTGTCATCTAATGCTATCCCCCTAAAGAAGCAAAAGGTAGAAAAATGA
Protein sequence

>MS.gene84605.t1

MGNEVTLKVMVDKERNKVLYAEAGNDFVDALFSFLTLPLGTIARLVAAESNIEAMKFGSISSLYQSVQDLDGKYLWSKECKEMLLKPRNSMEDLTLLTHSQNHTRQFSFSQLKNSHQILLYSNQSWVTQPLKNSIKYSKVVDLLKLSLLSKTPLTDFILKKKPTYADEGLPSEEGKIGIGKGLPSEEGKQMLIKLLVRKSTRNILFGIAEEDFADFLFSFLTFPLGGVLQMLEGFSSLSCIDILYKSMTELSPEKCLRSDELKNKLSQPQIFPTYEVRNQILPIKTAVLTSKEDGEVLKFVDPKSSVSGGYVTGPTTIMVTDDLVVTPMSSFDGVSHLERMKVPLNDIEEVVVNIGVKEGLNILKASLTSTSALTKGLKHFLGSRSVQANLSSNAIPLKKQKVEK