AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene99471

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene99471.t1 MTR_4g019340 83.333 492 56 3 8 498 37 503 0.0 796
MS.gene99471.t1 MTR_4g017830 74.954 539 117 7 3 537 6 530 0.0 780
MS.gene99471.t1 MTR_4g017440 67.836 513 148 7 3 512 8 506 0.0 650
MS.gene99471.t1 MTR_4g017410 65.517 522 146 8 1 517 1 493 0.0 649
MS.gene99471.t1 MTR_4g017470 60.994 523 154 6 1 517 1 479 0.0 577
MS.gene99471.t1 MTR_4g017550 64.780 477 143 10 36 508 18 473 0.0 564
MS.gene99471.t1 MTR_4g017610 57.654 503 176 10 4 504 8 475 0.0 531
MS.gene99471.t1 MTR_4g019310 42.773 512 259 15 1 504 1 486 8.64e-118 357
MS.gene99471.t1 MTR_7g066340 33.837 529 270 13 2 519 5 464 1.57e-80 260
MS.gene99471.t1 MTR_7g066260 33.091 550 286 12 3 537 9 491 1.08e-79 258
MS.gene99471.t1 MTR_7g066570 35.327 535 263 17 3 512 8 484 2.22e-78 257
MS.gene99471.t1 MTR_7g066350 33.333 522 253 10 1 504 1 445 2.82e-77 251
MS.gene99471.t1 MTR_7g066410 33.945 545 271 16 10 508 11 512 5.96e-77 252
MS.gene99471.t1 MTR_7g058710 31.767 532 296 11 1 514 1 483 6.16e-74 243
MS.gene99471.t1 MTR_7g066430 35.115 524 276 17 10 510 5 487 9.68e-71 235
MS.gene99471.t1 MTR_7g012680 33.396 530 245 16 3 512 8 449 4.94e-67 224
MS.gene99471.t1 MTR_7g066400 32.115 520 245 13 2 504 5 433 5.61e-67 223
MS.gene99471.t1 MTR_1g041315 32.495 517 245 15 5 492 10 451 3.13e-66 223
MS.gene99471.t1 MTR_7g066360 33.333 549 276 15 3 538 8 479 1.64e-64 218
MS.gene99471.t1 MTR_7g062280 32.707 532 280 16 10 514 11 491 1.02e-60 208
MS.gene99471.t1 MTR_7g063660 32.514 529 290 16 1 514 1 477 4.19e-60 206
MS.gene99471.t1 MTR_7g063880 32.101 514 281 15 10 513 12 467 4.98e-60 206
MS.gene99471.t1 MTR_7g066290 37.105 380 194 11 3 364 9 361 8.42e-59 201
MS.gene99471.t1 MTR_7g066310 29.808 520 222 14 10 519 8 394 9.16e-59 201
MS.gene99471.t1 MTR_7g066580 31.558 507 264 14 15 506 1 439 1.99e-58 201
MS.gene99471.t1 MTR_7g062300 32.816 515 288 16 3 507 6 472 1.21e-57 199
MS.gene99471.t1 MTR_7g063840 31.549 523 294 17 3 514 4 473 5.29e-57 197
MS.gene99471.t1 MTR_7g063900 32.692 520 297 17 2 508 3 482 1.12e-55 194
MS.gene99471.t1 MTR_7g063890 31.166 523 302 15 1 508 19 498 8.33e-52 184
MS.gene99471.t1 MTR_4g019240 76.471 119 22 3 4 121 8 121 3.28e-51 173
MS.gene99471.t1 MTR_4g019240 85.915 71 10 0 466 536 112 182 4.10e-30 116
MS.gene99471.t1 MTR_7g063820 31.947 529 300 19 1 514 1 484 4.60e-50 179
MS.gene99471.t1 MTR_2g029400 30.156 514 225 12 1 496 6 403 4.85e-48 172
MS.gene99471.t1 MTR_7g063830 32.506 403 228 10 1 389 1 373 2.46e-47 171
MS.gene99471.t1 MTR_7g063670 30.344 524 272 17 6 514 12 457 9.17e-47 170
MS.gene99471.t1 MTR_7g063920 29.470 509 271 13 10 514 12 436 3.59e-45 165
MS.gene99471.t1 MTR_7g058700 32.970 367 156 12 21 356 531 838 2.47e-43 165
MS.gene99471.t1 MTR_3g007740 30.286 525 266 20 1 508 1 442 6.32e-43 159
MS.gene99471.t1 MTR_7g066480 34.239 368 181 11 10 355 17 345 5.54e-41 153
MS.gene99471.t1 MTR_3g065200 28.685 502 259 16 10 502 4 415 4.70e-40 151
MS.gene99471.t1 MTR_7g066280 27.171 449 252 12 98 519 1 401 9.03e-37 141
MS.gene99471.t1 MTR_7g066280 26.316 266 143 8 4 242 145 384 1.55e-11 66.6
MS.gene99471.t1 MTR_7g066490 31.944 360 186 9 10 355 17 331 2.06e-36 140
MS.gene99471.t1 MTR_1g014060 33.906 233 118 8 18 240 9 215 4.37e-27 113
MS.gene99471.t1 MTR_1g014060 32.850 207 106 8 303 508 210 384 7.31e-17 83.2
MS.gene99471.t1 MTR_7g066680 31.447 318 160 8 225 504 37 334 1.37e-25 108
MS.gene99471.t1 MTR_4g019350 55.556 99 31 2 331 429 1 86 4.36e-25 99.4
MS.gene99471.t1 MTR_8g023240 23.063 555 323 16 9 529 37 521 3.88e-23 103
MS.gene99471.t1 MTR_7g063720 30.544 239 128 3 269 504 19 222 1.26e-22 97.4
MS.gene99471.t1 MTR_1g115440 31.518 257 145 8 1 246 1 237 1.06e-21 94.7
MS.gene99471.t1 MTR_1g115440 28.870 239 145 7 273 502 11 233 2.48e-16 79.0
MS.gene99471.t1 MTR_8g445860 31.325 249 149 6 1 246 7 236 7.31e-21 92.0
MS.gene99471.t1 MTR_8g445860 28.740 254 123 8 273 502 13 232 1.82e-20 90.9
MS.gene99471.t1 MTR_7g062270 33.659 205 102 7 1 196 1 180 1.30e-19 91.3
MS.gene99471.t1 MTR_0150s0010 29.644 253 154 5 1 246 1 236 9.58e-19 86.3
MS.gene99471.t1 MTR_0150s0010 28.205 234 153 5 273 502 10 232 1.91e-16 79.3
MS.gene99471.t1 MTR_7g100420 30.851 282 171 7 225 504 134 393 3.44e-18 87.0
MS.gene99471.t1 MTR_1g115455 27.200 250 159 3 1 246 1 231 1.98e-13 70.5
MS.gene99471.t1 MTR_1g115455 39.683 63 38 0 273 335 9 71 7.01e-11 62.8
MS.gene99471.t1 MTR_1g115450 38.462 78 46 1 273 348 7 84 1.67e-12 65.5
MS.gene99471.t1 MTR_1g115450 35.200 125 64 2 1 125 1 108 4.70e-12 64.3
MS.gene99471.t1 MTR_6g006800 63.043 46 15 1 1 44 1 46 1.44e-11 60.5
MS.gene99471.t1 MTR_0150s0030 37.879 66 41 0 273 338 8 73 3.60e-11 63.2
MS.gene99471.t1 MTR_8g445920 37.879 66 41 0 273 338 10 75 3.87e-11 60.5
MS.gene99471.t1 MTR_8g044890 37.879 66 41 0 273 338 10 75 3.87e-11 60.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene99471.t1 AT5G01120 30.888 518 311 13 1 504 1 485 5.36e-61 209
MS.gene99471.t1 AT5G01130 30.709 508 282 13 1 505 1 441 2.75e-60 206
MS.gene99471.t1 AT5G43240 31.689 527 299 15 1 504 1 489 2.59e-59 205
MS.gene99471.t1 AT5G43240 31.689 527 299 15 1 504 1 489 2.59e-59 205
MS.gene99471.t1 AT5G43240 31.689 527 299 15 1 504 1 489 2.59e-59 205
MS.gene99471.t1 AT3G09140 30.827 532 297 15 1 504 1 489 1.41e-56 197
MS.gene99471.t1 AT5G01150 31.549 523 291 15 1 504 1 475 4.04e-54 191
MS.gene99471.t1 AT3G09140 29.286 560 297 16 1 504 1 517 2.54e-51 184
MS.gene99471.t1 AT5G01140 29.541 545 303 16 1 537 1 472 2.17e-50 180
MS.gene99471.t1 AT3G09110 34.012 344 191 8 1 334 1 318 5.47e-49 173
MS.gene99471.t1 AT5G37320 29.183 514 293 15 16 509 18 480 1.62e-45 167
MS.gene99471.t1 AT3G09120 32.727 330 195 7 6 327 3 313 1.72e-43 157
MS.gene99471.t1 AT3G09120 28.870 239 146 8 273 502 6 229 2.59e-14 74.3
MS.gene99471.t1 AT5G43240 29.775 356 213 9 165 504 11 345 1.36e-28 117

Find 114 sgRNAs with CRISPR-Local

Find 310 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TAATAAACAGCCTAAGAATT+TGG 0.203171 4.2:+83264333 MS.gene99471:CDS
CATTGCTCTGGTTAGTTAAA+AGG 0.229748 4.2:-83264033 None:intergenic
GTCAAATTTGAATCTTGTTT+TGG 0.259105 4.2:-83268149 None:intergenic
TGGTAGGTTATCTTTCTTCT+TGG 0.272752 4.2:-83266974 None:intergenic
ACATCTTTAATCGATTTATT+AGG 0.276772 4.2:-83267507 None:intergenic
GGTATTGCTGATGCTTTAAA+TGG 0.278450 4.2:+83264382 MS.gene99471:CDS
ACCATCCAAAACCTTTATAA+TGG 0.287548 4.2:-83267157 None:intergenic
CATGCAGATGTTGATGGAAT+TGG 0.293472 4.2:+83264483 MS.gene99471:CDS
ACCATTAGGGTCCATTATAA+AGG 0.300457 4.2:+83267146 MS.gene99471:CDS
CTCACCACTACATATTATTA+TGG 0.301079 4.2:+83267336 MS.gene99471:CDS
ATGCACCCGTGACATTAAAA+TGG 0.306519 4.2:+83267029 MS.gene99471:CDS
GTGAAGAGACCCGCATTATA+TGG 0.323290 4.2:+83267540 MS.gene99471:CDS
ATCGATTTATTAGGAGATCT+TGG 0.324813 4.2:-83267498 None:intergenic
CGTAAATCCCTTTCTTGCTT+TGG 0.330917 4.2:-83267369 None:intergenic
ATAACTCAGTCTTCTAGTTT+AGG 0.333889 4.2:-83268218 None:intergenic
AGGGTCCATTATAAAGGTTT+TGG 0.333963 4.2:+83267152 MS.gene99471:CDS
AATGATTCACATGGATTCTT+CGG 0.347163 4.2:-83264190 None:intergenic
AGCTTCCTTACAATACCATT+AGG 0.351633 4.2:+83267132 MS.gene99471:CDS
ATTTGTCAATGGCTCATTAG+AGG 0.354868 4.2:-83266932 None:intergenic
ACAGGGTTCCAAACATCATT+TGG 0.367250 4.2:-83264145 None:intergenic
GAAGATTGTGCCAAGTTCTT+TGG 0.367844 4.2:+83264453 MS.gene99471:CDS
CTCTGACTGCTGATGCAAAC+TGG 0.370802 4.2:-83266999 None:intergenic
TTCAAAATTGTATTTGTCAA+TGG 0.373137 4.2:-83266943 None:intergenic
GAATTTGGATTCTGAGGGTC+AGG 0.378169 4.2:+83264348 MS.gene99471:CDS
CACACACAACATTGGAAAAC+AGG 0.378988 4.2:+83264537 MS.gene99471:CDS
CCCTCACTCCAAATGATGTT+TGG 0.379098 4.2:+83264137 MS.gene99471:CDS
GCTTCCTTACAATACCATTA+GGG 0.381396 4.2:+83267133 MS.gene99471:CDS
CCCTCAGAATCCAAATTCTT+AGG 0.386443 4.2:-83264343 None:intergenic
TAGAGAACTTGGACTCTTCC+TGG 0.392959 4.2:+83267220 MS.gene99471:CDS
GGAATGTTGAGGGGCTGGTT+TGG 0.395287 4.2:-83267300 None:intergenic
ATGCAGATGTTGATGGAATT+GGG 0.399870 4.2:+83264484 MS.gene99471:CDS
TTCTGATTTGAGTCAATTAG+AGG 0.405222 4.2:+83264510 MS.gene99471:CDS
GTATTGCTGATGCTTTAAAT+GGG 0.415851 4.2:+83264383 MS.gene99471:CDS
GTAGTTGTTGATCATTGCTC+TGG 0.425266 4.2:-83264045 None:intergenic
AAGATAATCTTTGCAGAAAC+CGG 0.426804 4.2:+83267084 MS.gene99471:CDS
ATTCTTAGGCTGTTTATTAG+TGG 0.429316 4.2:-83264329 None:intergenic
CTTGGTGTCGCACCACAGTT+TGG 0.434599 4.2:+83267273 MS.gene99471:CDS
TTCTTAGGCTGTTTATTAGT+GGG 0.434937 4.2:-83264328 None:intergenic
TACTTCTACTGTGTTATAAC+GGG 0.437052 4.2:-83267403 None:intergenic
GTACTTCTACTGTGTTATAA+CGG 0.438712 4.2:-83267404 None:intergenic
CAGAATCTTGATTGTACTTG+TGG 0.438965 4.2:+83264301 MS.gene99471:CDS
ATAAATTGATCCCATTGTCT+TGG 0.445414 4.2:-83267448 None:intergenic
ACTAGTTTGAACATACTTTG+AGG 0.450250 4.2:-83268171 None:intergenic
CGCTCCGCGTTACTCAATCT+TGG 0.450291 4.2:+83267255 MS.gene99471:CDS
ACTGCTGATGCAAACTGGTT+TGG 0.450650 4.2:-83266994 None:intergenic
CAGGAACACCAAAGCAAGAA+AGG 0.451058 4.2:+83267361 MS.gene99471:CDS
TCTGAGGGTCAGGGGAATAG+TGG 0.460813 4.2:+83264358 MS.gene99471:CDS
AACAACATTTGTTTGCAGAC+AGG 0.485916 4.2:-83264163 None:intergenic
CATGAGGAATGTTGAGGGGC+TGG 0.489637 4.2:-83267305 None:intergenic
GACTTCCATGCAGATGTTGA+TGG 0.493543 4.2:+83264477 MS.gene99471:CDS
CCAAACATCATTTGGAGTGA+GGG 0.493650 4.2:-83264137 None:intergenic
GCCTAAGAATTTGGATTCTG+AGG 0.494703 4.2:+83264342 MS.gene99471:CDS
ACAACATTTGTTTGCAGACA+GGG 0.497506 4.2:-83264162 None:intergenic
CAAAGTATGTTCAAACTAGT+AGG 0.498481 4.2:+83268174 MS.gene99471:CDS
ACCTTTATAATGGACCCTAA+TGG 0.499664 4.2:-83267147 None:intergenic
ATGGAAGTCACCAAAGAACT+TGG 0.501440 4.2:-83264463 None:intergenic
TCTTGGATCCATTGCAGTCA+AGG 0.503976 4.2:-83267481 None:intergenic
GTACAAGAGTGTAGAGAACT+TGG 0.512946 4.2:+83267209 MS.gene99471:CDS
TCAGAATCATCATCATTCCT+TGG 0.512960 4.2:+83264082 MS.gene99471:CDS
TGGACCCTAATGGTATTGTA+AGG 0.519001 4.2:-83267137 None:intergenic
ACTACATATTATTATGGTAC+AGG 0.521118 4.2:+83267342 MS.gene99471:CDS
TGAATATTGATGACACTGAA+TGG 0.522820 4.2:+83264230 MS.gene99471:CDS
TGCAAAAGCCTTGACTGCAA+TGG 0.525800 4.2:+83267473 MS.gene99471:CDS
CACAGTAGAAGTACCGGTAG+TGG 0.526410 4.2:+83267413 MS.gene99471:CDS
TAGTAGCAAGTGGAAGAGAA+AGG 0.530533 4.2:-83264003 None:intergenic
AGACCCGCATTATATGGTAT+AGG 0.533415 4.2:+83267546 MS.gene99471:CDS
GGAGTGATTTCCAAGACAAT+GGG 0.534615 4.2:+83267438 MS.gene99471:CDS
CTTGGACTCTTCCTGGTGTA+CGG 0.536964 4.2:+83267227 MS.gene99471:CDS
GAAATCACTCCTCCCACTAC+CGG 0.538904 4.2:-83267426 None:intergenic
TCAAAATTTACACTGACTAG+TGG 0.539589 4.2:+83268104 MS.gene99471:CDS
TCAATTCTTTCAAATATGAA+AGG 0.542776 4.2:-83267608 None:intergenic
TTGATGTCAAAGAGGCTGCT+AGG 0.544211 4.2:-83268085 None:intergenic
AGGAGTGATTTCCAAGACAA+TGG 0.549627 4.2:+83267437 MS.gene99471:CDS
TAAATCGATTAAAGATGTGG+TGG 0.555451 4.2:+83267512 MS.gene99471:CDS
TAATAAATCGATTAAAGATG+TGG 0.562172 4.2:+83267509 MS.gene99471:CDS
TTTCACTTCAAGATCGCCAA+GGG 0.563924 4.2:-83267637 None:intergenic
TCCAAACATCATTTGGAGTG+AGG 0.565006 4.2:-83264138 None:intergenic
AGGAACACCAAAGCAAGAAA+GGG 0.568229 4.2:+83267362 MS.gene99471:CDS
AAAGAATTGAGCTTTCCCCT+TGG 0.571373 4.2:+83267621 MS.gene99471:CDS
GGAGCGCGAGTCCGTACACC+AGG 0.576521 4.2:-83267238 None:intergenic
ATTTGGATTCTGAGGGTCAG+GGG 0.580968 4.2:+83264350 MS.gene99471:CDS
GAGGAAGTCACACACAACAT+TGG 0.582955 4.2:+83264529 MS.gene99471:CDS
CCTAAGAATTTGGATTCTGA+GGG 0.584987 4.2:+83264343 MS.gene99471:CDS
TTGTACATGAGGAATGTTGA+GGG 0.587586 4.2:-83267310 None:intergenic
TAGGCTTGATGAACTCGCTA+AGG 0.587970 4.2:+83268193 MS.gene99471:CDS
ATCTCCTATACCATATAATG+CGG 0.589870 4.2:-83267550 None:intergenic
TCTCCTATACCATATAATGC+GGG 0.591601 4.2:-83267549 None:intergenic
AAATCGATTAAAGATGTGGT+GGG 0.595980 4.2:+83267513 MS.gene99471:CDS
CTGATGCAAACTGGTTTGGT+AGG 0.598901 4.2:-83266990 None:intergenic
TTATAACACAGTAGAAGTAC+CGG 0.606568 4.2:+83267407 MS.gene99471:CDS
ACAGTAGAAGTACCGGTAGT+GGG 0.610535 4.2:+83267414 MS.gene99471:CDS
AATTTGGATTCTGAGGGTCA+GGG 0.610725 4.2:+83264349 MS.gene99471:CDS
CAATTCCATCAACATCTGCA+TGG 0.613002 4.2:-83264482 None:intergenic
CTTTCACTTCAAGATCGCCA+AGG 0.614269 4.2:-83267638 None:intergenic
TATTGCTGATGCTTTAAATG+GGG 0.614508 4.2:+83264384 MS.gene99471:CDS
GATAAGCATTGGTGAAGCTG+AGG 0.615886 4.2:+83267662 MS.gene99471:CDS
TTCTTGCATAATGATTCACA+TGG 0.617558 4.2:-83264199 None:intergenic
AGGCTAAGCTGTACTTGAGG+AGG 0.619347 4.2:-83266912 None:intergenic
AGGCGAATGATAGTAGCAAG+TGG 0.630753 4.2:-83264013 None:intergenic
GTGGTGAGTGTTTGTACATG+AGG 0.631505 4.2:-83267321 None:intergenic
GGGTTTGTACGCTTTCATAG+AGG 0.642551 4.2:-83264117 None:intergenic
GAAGTGAAAGTGATAAGCAT+TGG 0.646678 4.2:+83267651 MS.gene99471:CDS
TGTACCATAATAATATGTAG+TGG 0.647988 4.2:-83267340 None:intergenic
TGCAGATGTTGATGGAATTG+GGG 0.656452 4.2:+83264485 MS.gene99471:CDS
GAGGGTCAGGGGAATAGTGG+TGG 0.663204 4.2:+83264361 MS.gene99471:CDS
TAGAGGCTAAGCTGTACTTG+AGG 0.670253 4.2:-83266915 None:intergenic
ATGTCAAAGAGGCTGCTAGG+AGG 0.681764 4.2:-83268082 None:intergenic
GTAGAAGTACCGGTAGTGGG+AGG 0.686576 4.2:+83267417 MS.gene99471:CDS
ACACAACATTGGAAAACAGG+AGG 0.691626 4.2:+83264540 MS.gene99471:CDS
TTCACTTCAAGATCGCCAAG+GGG 0.708819 4.2:-83267636 None:intergenic
TGTACATGAGGAATGTTGAG+GGG 0.709478 4.2:-83267309 None:intergenic
TTTGTACATGAGGAATGTTG+AGG 0.712351 4.2:-83267311 None:intergenic
TGGTTTGGACAACCAAACTG+TGG 0.732553 4.2:-83267285 None:intergenic
GACACCAAGATTGAGTAACG+CGG 0.813956 4.2:-83267259 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TATAAAATGAAAATAGAAAA+TGG + chr4.2:83266625-83266644 MS.gene99471:intron 10.0%
!!! TTTTAAATTTTTATACATTC+AGG + chr4.2:83267943-83267962 MS.gene99471:intron 10.0%
!! AAGTTCAAACAATAAATTAT+AGG - chr4.2:83265428-83265447 None:intergenic 15.0%
!! AAAGAATATAAAGGAAAGTA+AGG + chr4.2:83265591-83265610 MS.gene99471:intron 20.0%
!! AATGGTTTCACAAAATTAAA+CGG + chr4.2:83266643-83266662 MS.gene99471:intron 20.0%
!! ATTTGCCATTAAAATAAACT+TGG + chr4.2:83266251-83266270 MS.gene99471:intron 20.0%
!! GAAAAAATGATGTAATAAGT+AGG + chr4.2:83265656-83265675 MS.gene99471:intron 20.0%
!! TAACAGAATGTAATAAGTAA+GGG + chr4.2:83265918-83265937 MS.gene99471:intron 20.0%
!! TAATAAATCGATTAAAGATG+TGG + chr4.2:83267509-83267528 MS.gene99471:CDS 20.0%
!! TCAATTCTTTCAAATATGAA+AGG - chr4.2:83267611-83267630 None:intergenic 20.0%
!! TCAGTTGTATTTATTAATCA+AGG + chr4.2:83266324-83266343 MS.gene99471:intron 20.0%
!! TTCAAAATTGTATTTGTCAA+TGG - chr4.2:83266946-83266965 None:intergenic 20.0%
!! TTTGCCATTAAAATAAACTT+GGG + chr4.2:83266252-83266271 MS.gene99471:intron 20.0%
!!! ACATCTTTAATCGATTTATT+AGG - chr4.2:83267510-83267529 None:intergenic 20.0%
!!! TATATAACTTGATGCTTTTA+GGG + chr4.2:83265498-83265517 MS.gene99471:intron 20.0%
!!! TTAATTAGTGTTTTTGTCAT+TGG + chr4.2:83266690-83266709 MS.gene99471:intron 20.0%
! AAAATGATGTAATAAGTAGG+AGG + chr4.2:83265659-83265678 MS.gene99471:intron 25.0%
! AAATGATGTAATAAGTAGGA+GGG + chr4.2:83265660-83265679 MS.gene99471:intron 25.0%
! AATATAAAGGAAAGTAAGGA+GGG + chr4.2:83265595-83265614 MS.gene99471:intron 25.0%
! AATGGAAAGGAAAATAAGTA+GGG + chr4.2:83265862-83265881 MS.gene99471:intron 25.0%
! AATTAAACAATGAGCCATTA+AGG - chr4.2:83266676-83266695 None:intergenic 25.0%
! ACAAACAAGTTTACATTACT+TGG - chr4.2:83266850-83266869 None:intergenic 25.0%
! ACTACATATTATTATGGTAC+AGG + chr4.2:83267342-83267361 MS.gene99471:CDS 25.0%
! ATAAGATAAAATGCTAGCTA+GGG - chr4.2:83266504-83266523 None:intergenic 25.0%
! ATGGTTTCACAAAATTAAAC+GGG + chr4.2:83266644-83266663 MS.gene99471:intron 25.0%
! CTATGTGAGAAAGAATATAA+AGG + chr4.2:83265582-83265601 MS.gene99471:intron 25.0%
! CTTTATATTCTTTCTCACAT+AGG - chr4.2:83265584-83265603 None:intergenic 25.0%
! GAAAGTTCATAATTCAAGAA+TGG - chr4.2:83265474-83265493 None:intergenic 25.0%
! GGAAAAAAATTATAAACTGC+AGG - chr4.2:83265998-83266017 None:intergenic 25.0%
! GTAACAGAATGTAATAAGTA+AGG + chr4.2:83265917-83265936 MS.gene99471:intron 25.0%
! GTTGGTTGTATTTATTAACA+AGG + chr4.2:83266353-83266372 MS.gene99471:intron 25.0%
! TAATAAACAGCCTAAGAATT+TGG + chr4.2:83264333-83264352 MS.gene99471:CDS 25.0%
! TACAAGATGTTAAAACGAAA+CGG - chr4.2:83266821-83266840 None:intergenic 25.0%
! TATTAATCAAGGAAATGTGT+TGG + chr4.2:83266335-83266354 MS.gene99471:intron 25.0%
! TCCTAAAACTTAAGATAGTT+TGG + chr4.2:83265770-83265789 MS.gene99471:intron 25.0%
! TGTACCATAATAATATGTAG+TGG - chr4.2:83267343-83267362 None:intergenic 25.0%
! TTCCTTGTTAACAAATACAA+CGG - chr4.2:83266388-83266407 None:intergenic 25.0%
! TTGCCATTAAAATAAACTTG+GGG + chr4.2:83266253-83266272 MS.gene99471:intron 25.0%
!! AAATACAACTGACACATTTT+AGG - chr4.2:83266316-83266335 None:intergenic 25.0%
!! AAATGTTTTCACAAAGTACA+CGG - chr4.2:83266280-83266299 None:intergenic 25.0%
!! AAGAGAGTAAATAACCATTT+TGG - chr4.2:83268002-83268021 None:intergenic 25.0%
!! CTATATAACTTGATGCTTTT+AGG + chr4.2:83265497-83265516 MS.gene99471:intron 25.0%
!! CTGTCTATTAAGATTTTCAA+TGG - chr4.2:83263920-83263939 None:intergenic 25.0%
!! CTTAGGTTTACTTGTTAATA+AGG - chr4.2:83266565-83266584 None:intergenic 25.0%
!! GTTTCAGTCTAAGATTATTT+GGG + chr4.2:83265228-83265247 MS.gene99471:intron 25.0%
!! TCCAAACTATCTTAAGTTTT+AGG - chr4.2:83265774-83265793 None:intergenic 25.0%
!! TGTTTCAGTCTAAGATTATT+TGG + chr4.2:83265227-83265246 MS.gene99471:intron 25.0%
!! TTTAAATGGGGTTTTTGTTA+AGG + chr4.2:83264396-83264415 MS.gene99471:CDS 25.0%
!!! CTAAAAGCATCAAGTTATAT+AGG - chr4.2:83265499-83265518 None:intergenic 25.0%
!!! GAGTTTTGAAAAAAAACTGT+AGG + chr4.2:83264985-83265004 MS.gene99471:intron 25.0%
!!! GTCAAATTTGAATCTTGTTT+TGG - chr4.2:83268152-83268171 None:intergenic 25.0%
!!! GTCATTTTACTACAATATCA+AGG - chr4.2:83265089-83265108 None:intergenic 25.0%
!!! TAACATCCATTTTAATGTCA+CGG - chr4.2:83267038-83267057 None:intergenic 25.0%
!!! TGTAAATTTTGATGTCAAAG+AGG - chr4.2:83268096-83268115 None:intergenic 25.0%
AAATCGATTAAAGATGTGGT+GGG + chr4.2:83267513-83267532 MS.gene99471:CDS 30.0%
AACAATGACTCACACATTTA+AGG + chr4.2:83267975-83267994 MS.gene99471:intron 30.0%
AACCTCAAAGGGAATTAATT+GGG + chr4.2:83266116-83266135 MS.gene99471:intron 30.0%
AAGATAATCTTTGCAGAAAC+CGG + chr4.2:83267084-83267103 MS.gene99471:CDS 30.0%
AAGTAAGGAGGGAAATAAAT+TGG + chr4.2:83265606-83265625 MS.gene99471:intron 30.0%
AATGATTCACATGGATTCTT+CGG - chr4.2:83264193-83264212 None:intergenic 30.0%
ACCATCCAAAACCTTTATAA+TGG - chr4.2:83267160-83267179 None:intergenic 30.0%
ACTACAAGAAAACACATTCA+GGG - chr4.2:83267806-83267825 None:intergenic 30.0%
AGAACTATGTTGTTAATCGT+TGG + chr4.2:83265203-83265222 MS.gene99471:intron 30.0%
AGTTTGGATTTGACATAGTA+AGG + chr4.2:83265786-83265805 MS.gene99471:intron 30.0%
ATAAATTGATCCCATTGTCT+TGG - chr4.2:83267451-83267470 None:intergenic 30.0%
ATCTCCTATACCATATAATG+CGG - chr4.2:83267553-83267572 None:intergenic 30.0%
ATTCTTAGGCTGTTTATTAG+TGG - chr4.2:83264332-83264351 None:intergenic 30.0%
CAAAGTATGTTCAAACTAGT+AGG + chr4.2:83268174-83268193 MS.gene99471:CDS 30.0%
CTCACCACTACATATTATTA+TGG + chr4.2:83267336-83267355 MS.gene99471:CDS 30.0%
GAATATAAAGGAAAGTAAGG+AGG + chr4.2:83265594-83265613 MS.gene99471:intron 30.0%
GAATGGAAAGGAAAATAAGT+AGG + chr4.2:83265861-83265880 MS.gene99471:intron 30.0%
GAATTGCAATAGGAATTCAA+TGG - chr4.2:83266070-83266089 None:intergenic 30.0%
GATAAGATAAAATGCTAGCT+AGG - chr4.2:83266505-83266524 None:intergenic 30.0%
GGAAAAAGATGAACTTTATC+AGG - chr4.2:83266049-83266068 None:intergenic 30.0%
GTACTTCTACTGTGTTATAA+CGG - chr4.2:83267407-83267426 None:intergenic 30.0%
GTTTGGATTTGACATAGTAA+GGG + chr4.2:83265787-83265806 MS.gene99471:intron 30.0%
TAAATCGATTAAAGATGTGG+TGG + chr4.2:83267512-83267531 MS.gene99471:CDS 30.0%
TACTACAAGAAAACACATTC+AGG - chr4.2:83267807-83267826 None:intergenic 30.0%
TACTTCTACTGTGTTATAAC+GGG - chr4.2:83267406-83267425 None:intergenic 30.0%
TGAATCATTGTTCCAAATTG+TGG + chr4.2:83265039-83265058 MS.gene99471:intron 30.0%
TTCTTAGGCTGTTTATTAGT+GGG - chr4.2:83264331-83264350 None:intergenic 30.0%
TTCTTGCATAATGATTCACA+TGG - chr4.2:83264202-83264221 None:intergenic 30.0%
TTGATACCAAAGTTACTCTA+AGG - chr4.2:83266743-83266762 None:intergenic 30.0%
TTTGAACTTTGAACTTGCAT+TGG + chr4.2:83265439-83265458 MS.gene99471:intron 30.0%
! ACTAGTTTGAACATACTTTG+AGG - chr4.2:83268174-83268193 None:intergenic 30.0%
! ATCGATTTATTAGGAGATCT+TGG - chr4.2:83267501-83267520 None:intergenic 30.0%
! GTATTGCTGATGCTTTAAAT+GGG + chr4.2:83264383-83264402 MS.gene99471:CDS 30.0%
! TACTTGCTCTTTATTTCAAG+AGG - chr4.2:83266589-83266608 None:intergenic 30.0%
! TATTGCTGATGCTTTAAATG+GGG + chr4.2:83264384-83264403 MS.gene99471:CDS 30.0%
! TCAAAATTTACACTGACTAG+TGG + chr4.2:83268104-83268123 MS.gene99471:CDS 30.0%
! TCTTTATTTCAAGAGGTCTT+AGG - chr4.2:83266582-83266601 None:intergenic 30.0%
! TGAATATTGATGACACTGAA+TGG + chr4.2:83264230-83264249 MS.gene99471:CDS 30.0%
! TTATAACACAGTAGAAGTAC+CGG + chr4.2:83267407-83267426 MS.gene99471:CDS 30.0%
! TTCTGATTTGAGTCAATTAG+AGG + chr4.2:83264510-83264529 MS.gene99471:CDS 30.0%
! TTTAAAGTGAGTCTTTGTGA+TGG - chr4.2:83266529-83266548 None:intergenic 30.0%
!! AACATCCATTTTAATGTCAC+GGG - chr4.2:83267037-83267056 None:intergenic 30.0%
!! AAGCGTTATCATTTTAGTCT+AGG + chr4.2:83265262-83265281 MS.gene99471:intron 30.0%
!! TCGCAATATAAAGGTTTTAG+AGG - chr4.2:83265155-83265174 None:intergenic 30.0%
!!! TCCATTATAAAGGTTTTGGA+TGG + chr4.2:83267156-83267175 MS.gene99471:CDS 30.0%
AAAACTCAGTATGCAGTTCA+AGG - chr4.2:83264972-83264991 None:intergenic 35.0%
AAAGTGCAAACCATAAAGGA+AGG - chr4.2:83268050-83268069 None:intergenic 35.0%
AAATAAGTAGGGAAATCGAG+TGG + chr4.2:83265873-83265892 MS.gene99471:intron 35.0%
AACAACATTTGTTTGCAGAC+AGG - chr4.2:83264166-83264185 None:intergenic 35.0%
AACAATGAGCCATTAAGGTA+AGG - chr4.2:83266671-83266690 None:intergenic 35.0%
AACACTCCTTAGAGTAACTT+TGG + chr4.2:83266734-83266753 MS.gene99471:intron 35.0%
AAGTGCAAACCATAAAGGAA+GGG - chr4.2:83268049-83268068 None:intergenic 35.0%
ACAACATTTGTTTGCAGACA+GGG - chr4.2:83264165-83264184 None:intergenic 35.0%
ACCATTAGGGTCCATTATAA+AGG + chr4.2:83267146-83267165 MS.gene99471:CDS 35.0%
AGAGAAAGATTTCTCCTTCA+AGG + chr4.2:83266177-83266196 MS.gene99471:intron 35.0%
AGCTTCCTTACAATACCATT+AGG + chr4.2:83267132-83267151 MS.gene99471:CDS 35.0%
AGTTCAAGGACCAACTAATT+TGG - chr4.2:83264958-83264977 None:intergenic 35.0%
ATTTGTCAATGGCTCATTAG+AGG - chr4.2:83266935-83266954 None:intergenic 35.0%
CACACATTTAAGGACCAAAA+TGG + chr4.2:83267985-83268004 MS.gene99471:intron 35.0%
CAGAATCTTGATTGTACTTG+TGG + chr4.2:83264301-83264320 MS.gene99471:CDS 35.0%
CCTAAGAATTTGGATTCTGA+GGG + chr4.2:83264343-83264362 MS.gene99471:CDS 35.0%
GAACCTCAAAGGGAATTAAT+TGG + chr4.2:83266115-83266134 MS.gene99471:intron 35.0%
GAAGGAGAAATCTTTCTCTT+TGG - chr4.2:83266176-83266195 None:intergenic 35.0%
GAAGTGAAAGTGATAAGCAT+TGG + chr4.2:83267651-83267670 MS.gene99471:CDS 35.0%
GAGAAAGATTTCTCCTTCAA+GGG + chr4.2:83266178-83266197 MS.gene99471:intron 35.0%
GATTTGTCTCCCAAATTAGT+TGG + chr4.2:83264945-83264964 MS.gene99471:intron 35.0%
GCTTCCTTACAATACCATTA+GGG + chr4.2:83267133-83267152 MS.gene99471:CDS 35.0%
GGGAATTAATTGGGTAAAAG+AGG + chr4.2:83266125-83266144 MS.gene99471:intron 35.0%
GTAATAAGTAGGAGGGAATA+GGG + chr4.2:83265667-83265686 MS.gene99471:intron 35.0%
GTTCAAGGACCAACTAATTT+GGG - chr4.2:83264957-83264976 None:intergenic 35.0%
GTTGTAACTGATATAGCTGA+GGG + chr4.2:83265895-83265914 MS.gene99471:intron 35.0%
GTTTCAAAATGCTACTCGAA+CGG + chr4.2:83265314-83265333 MS.gene99471:intron 35.0%
TAATAAGTAGGAGGGAATAG+GGG + chr4.2:83265668-83265687 MS.gene99471:intron 35.0%
TACAGAAGTAAGTGAGAAGT+GGG + chr4.2:83265946-83265965 MS.gene99471:intron 35.0%
TACCCAATTAATTCCCTTTG+AGG - chr4.2:83266121-83266140 None:intergenic 35.0%
TCAGAATCATCATCATTCCT+TGG + chr4.2:83264082-83264101 MS.gene99471:CDS 35.0%
TCCAGTGTAATCATAAGTGT+CGG - chr4.2:83264731-83264750 None:intergenic 35.0%
TCTAGGCTTAGTTAGAATTC+TGG + chr4.2:83265279-83265298 MS.gene99471:intron 35.0%
TCTCCTATACCATATAATGC+GGG - chr4.2:83267552-83267571 None:intergenic 35.0%
TCTTCTGATGTATCTTCCAT+TGG - chr4.2:83267849-83267868 None:intergenic 35.0%
TGGTAGGTTATCTTTCTTCT+TGG - chr4.2:83266977-83266996 None:intergenic 35.0%
TGTAATAAGTAGGAGGGAAT+AGG + chr4.2:83265666-83265685 MS.gene99471:intron 35.0%
TTACAGAAGTAAGTGAGAAG+TGG + chr4.2:83265945-83265964 MS.gene99471:intron 35.0%
TTATTCACGAAAGTGACCAA+TGG + chr4.2:83267830-83267849 MS.gene99471:intron 35.0%
TTCAGTTTAACCCTTGTATG+TGG - chr4.2:83267892-83267911 None:intergenic 35.0%
TTGTACATGAGGAATGTTGA+GGG - chr4.2:83267313-83267332 None:intergenic 35.0%
TTGTTGATACCCTTCCTTTA+TGG + chr4.2:83268037-83268056 MS.gene99471:intron 35.0%
TTTGAGTAAACCCGAGAATT+GGG + chr4.2:83264629-83264648 MS.gene99471:intron 35.0%
TTTGTACATGAGGAATGTTG+AGG - chr4.2:83267314-83267333 None:intergenic 35.0%
! AACCTCATAAGAGTGCATTA+AGG + chr4.2:83265822-83265841 MS.gene99471:intron 35.0%
! AGGGTCCATTATAAAGGTTT+TGG + chr4.2:83267152-83267171 MS.gene99471:CDS 35.0%
! ATGCAGATGTTGATGGAATT+GGG + chr4.2:83264484-83264503 MS.gene99471:CDS 35.0%
! CATTGCTCTGGTTAGTTAAA+AGG - chr4.2:83264036-83264055 None:intergenic 35.0%
! GAAGTCAACAAAGTTTTCAC+CGG - chr4.2:83267106-83267125 None:intergenic 35.0%
! GGGTTTTTGTTAAGGACAAT+GGG + chr4.2:83264404-83264423 MS.gene99471:CDS 35.0%
! GGTATTGCTGATGCTTTAAA+TGG + chr4.2:83264382-83264401 MS.gene99471:CDS 35.0%
! GTCCGTTGTATTTGTTAACA+AGG + chr4.2:83266383-83266402 MS.gene99471:intron 35.0%
! TTCTGATTGAAGGTGTGTTT+AGG + chr4.2:83264680-83264699 MS.gene99471:intron 35.0%
! TTGGATGGTAACTCTTTTGT+TGG + chr4.2:83267171-83267190 MS.gene99471:CDS 35.0%
!! ACCTTTATAATGGACCCTAA+TGG - chr4.2:83267150-83267169 None:intergenic 35.0%
!! TCTGTTAGTTTGCAGCTTAT+TGG - chr4.2:83265638-83265657 None:intergenic 35.0%
!! TTTTGAGTAAACCCGAGAAT+TGG + chr4.2:83264628-83264647 MS.gene99471:intron 35.0%
!!! CTTTTAGGGTAGGATGTATT+TGG + chr4.2:83265512-83265531 MS.gene99471:intron 35.0%
!!! GGACAATGGGTTTTTGTTTT+TGG + chr4.2:83264417-83264436 MS.gene99471:CDS 35.0%
!!! GGACCCCAAGTTTATTTTAA+TGG - chr4.2:83266259-83266278 None:intergenic 35.0%
!!! TAACTTGATGCTTTTAGGGT+AGG + chr4.2:83265502-83265521 MS.gene99471:intron 35.0%
AAAGAATTGAGCTTTCCCCT+TGG + chr4.2:83267621-83267640 MS.gene99471:CDS 40.0%
ACACAACATTGGAAAACAGG+AGG + chr4.2:83264540-83264559 MS.gene99471:CDS 40.0%
ACAGGGTTCCAAACATCATT+TGG - chr4.2:83264148-83264167 None:intergenic 40.0%
ACTAGCTAGCCCACAAAAAT+TGG - chr4.2:83264880-83264899 None:intergenic 40.0%
ACTGCAGGCTAATTTAAGAG+TGG - chr4.2:83265983-83266002 None:intergenic 40.0%
AGACCCGCATTATATGGTAT+AGG + chr4.2:83267546-83267565 MS.gene99471:CDS 40.0%
AGAGCCACTACTCATATACA+AGG - chr4.2:83266210-83266229 None:intergenic 40.0%
AGCCACTACTCATATACAAG+GGG - chr4.2:83266208-83266227 None:intergenic 40.0%
AGGAACACCAAAGCAAGAAA+GGG + chr4.2:83267362-83267381 MS.gene99471:CDS 40.0%
AGGAGTGATTTCCAAGACAA+TGG + chr4.2:83267437-83267456 MS.gene99471:CDS 40.0%
ATAGGGTTCAACAACACTTG+AGG - chr4.2:83266094-83266113 None:intergenic 40.0%
ATGCACCCGTGACATTAAAA+TGG + chr4.2:83267029-83267048 MS.gene99471:CDS 40.0%
ATGGAAGTCACCAAAGAACT+TGG - chr4.2:83264466-83264485 None:intergenic 40.0%
CAATTCCATCAACATCTGCA+TGG - chr4.2:83264485-83264504 None:intergenic 40.0%
CAATTGCGGTCGCAATATAA+AGG - chr4.2:83265164-83265183 None:intergenic 40.0%
CACACACAACATTGGAAAAC+AGG + chr4.2:83264537-83264556 MS.gene99471:CDS 40.0%
CACCTTAATGCACTCTTATG+AGG - chr4.2:83265827-83265846 None:intergenic 40.0%
CATTGGAAAACAGGAGGTAA+TGG + chr4.2:83264546-83264565 MS.gene99471:intron 40.0%
CCAGTGTAATCATAAGTGTC+GGG - chr4.2:83264730-83264749 None:intergenic 40.0%
CCCTCAGAATCCAAATTCTT+AGG - chr4.2:83264346-83264365 None:intergenic 40.0%
CGTAAATCCCTTTCTTGCTT+TGG - chr4.2:83267372-83267391 None:intergenic 40.0%
CTATGCGAGAAAGAATGGAA+AGG + chr4.2:83265849-83265868 MS.gene99471:intron 40.0%
CTGCAAAGTGCAAACCATAA+AGG - chr4.2:83268054-83268073 None:intergenic 40.0%
GAAGATTGTGCCAAGTTCTT+TGG + chr4.2:83264453-83264472 MS.gene99471:CDS 40.0%
GACATCGTCTCACATGTTTA+AGG - chr4.2:83267747-83267766 None:intergenic 40.0%
GAGCCACTACTCATATACAA+GGG - chr4.2:83266209-83266228 None:intergenic 40.0%
GAGTTTGTAGAGTAAGACCA+TGG + chr4.2:83264792-83264811 MS.gene99471:intron 40.0%
GCCTAAGAATTTGGATTCTG+AGG + chr4.2:83264342-83264361 MS.gene99471:CDS 40.0%
GGAGTGATTTCCAAGACAAT+GGG + chr4.2:83267438-83267457 MS.gene99471:CDS 40.0%
GGTTGTAACTGATATAGCTG+AGG + chr4.2:83265894-83265913 MS.gene99471:intron 40.0%
GTAGTTGTTGATCATTGCTC+TGG - chr4.2:83264048-83264067 None:intergenic 40.0%
TAAACGGGTCCTTACCTTAA+TGG + chr4.2:83266659-83266678 MS.gene99471:intron 40.0%
TAACGTGACATCCCAATTCT+CGG - chr4.2:83264643-83264662 None:intergenic 40.0%
TAGGGTTCAACAACACTTGA+GGG - chr4.2:83266093-83266112 None:intergenic 40.0%
TAGTAGCAAGTGGAAGAGAA+AGG - chr4.2:83264006-83264025 None:intergenic 40.0%
TCTCGAACTCATTAATCGTC+AGG - chr4.2:83265359-83265378 None:intergenic 40.0%
TCTGATCCTATTGATCCAGA+GGG + chr4.2:83266018-83266037 MS.gene99471:intron 40.0%
TGGACCCTAATGGTATTGTA+AGG - chr4.2:83267140-83267159 None:intergenic 40.0%
TGGAGAATTAGGTGTGAACT+GGG + chr4.2:83265691-83265710 MS.gene99471:intron 40.0%
TGTACATGAGGAATGTTGAG+GGG - chr4.2:83267312-83267331 None:intergenic 40.0%
TTCGTACACATCTCAATGCA+CGG - chr4.2:83266766-83266785 None:intergenic 40.0%
TTGGTGAAGCTGAGGTAAAT+TGG + chr4.2:83267670-83267689 MS.gene99471:intron 40.0%
TTTCACTTCAAGATCGCCAA+GGG - chr4.2:83267640-83267659 None:intergenic 40.0%
! AATTTGGATTCTGAGGGTCA+GGG + chr4.2:83264349-83264368 MS.gene99471:CDS 40.0%
! ACACCTTCAATCAGAAGTGT+CGG - chr4.2:83264676-83264695 None:intergenic 40.0%
! AGAGGTTTTTGATGCTTCCA+AGG - chr4.2:83264102-83264121 None:intergenic 40.0%
! CAGTGTAATCATAAGTGTCG+GGG - chr4.2:83264729-83264748 None:intergenic 40.0%
! CATGCAGATGTTGATGGAAT+TGG + chr4.2:83264483-83264502 MS.gene99471:CDS 40.0%
! CCAAACATCATTTGGAGTGA+GGG - chr4.2:83264140-83264159 None:intergenic 40.0%
! CTCATAAGAGTGCATTAAGG+TGG + chr4.2:83265825-83265844 MS.gene99471:intron 40.0%
! CTTTATGGTTTGCACTTTGC+AGG + chr4.2:83268052-83268071 MS.gene99471:intron 40.0%
! GACTTTGAGAGTATACTCCA+AGG - chr4.2:83264835-83264854 None:intergenic 40.0%
! GGGGTTTTTGTTAAGGACAA+TGG + chr4.2:83264403-83264422 MS.gene99471:CDS 40.0%
! GTACAAGAGTGTAGAGAACT+TGG + chr4.2:83267209-83267228 MS.gene99471:CDS 40.0%
! TCCAAACATCATTTGGAGTG+AGG - chr4.2:83264141-83264160 None:intergenic 40.0%
! TGCAGATGTTGATGGAATTG+GGG + chr4.2:83264485-83264504 MS.gene99471:CDS 40.0%
!! AATTCCCTTTGAGGTTCGAT+AGG - chr4.2:83266112-83266131 None:intergenic 40.0%
!! ATTCCCTTTGAGGTTCGATA+GGG - chr4.2:83266111-83266130 None:intergenic 40.0%
!! GTTACTCTAAGGAGTGTTTG+AGG - chr4.2:83266732-83266751 None:intergenic 40.0%
!! TGTACAGCTCTGGCTTTAAT+TGG + chr4.2:83264901-83264920 MS.gene99471:intron 40.0%
AACGTGACATCCCAATTCTC+GGG - chr4.2:83264642-83264661 None:intergenic 45.0%
ACTGCTGATGCAAACTGGTT+TGG - chr4.2:83266997-83267016 None:intergenic 45.0%
AGCCCACAAAAATTGGCACT+GGG - chr4.2:83264873-83264892 None:intergenic 45.0%
AGCTAGGGATGATGCATTTC+AGG - chr4.2:83266489-83266508 None:intergenic 45.0%
AGGCGAATGATAGTAGCAAG+TGG - chr4.2:83264016-83264035 None:intergenic 45.0%
AGGGTTCAACAACACTTGAG+GGG - chr4.2:83266092-83266111 None:intergenic 45.0%
CACTTGAGGGGAATTGCAAT+AGG - chr4.2:83266080-83266099 None:intergenic 45.0%
CAGGAACACCAAAGCAAGAA+AGG + chr4.2:83267361-83267380 MS.gene99471:CDS 45.0%
CCAAATTGTGGTCGCAATTG+TGG + chr4.2:83265051-83265070 MS.gene99471:intron 45.0%
CCACAATTGCGACCACAATT+TGG - chr4.2:83265054-83265073 None:intergenic 45.0%
CCACTACTCATATACAAGGG+GGG - chr4.2:83266206-83266225 None:intergenic 45.0%
CCCGACACTTATGATTACAC+TGG + chr4.2:83264727-83264746 MS.gene99471:intron 45.0%
CCCTCACTCCAAATGATGTT+TGG + chr4.2:83264137-83264156 MS.gene99471:CDS 45.0%
CTCTGATCCTATTGATCCAG+AGG + chr4.2:83266017-83266036 MS.gene99471:intron 45.0%
CTCTGGATCAATAGGATCAG+AGG - chr4.2:83266019-83266038 None:intergenic 45.0%
CTTTATCAGGATCAACCCTC+TGG - chr4.2:83266036-83266055 None:intergenic 45.0%
CTTTCACTTCAAGATCGCCA+AGG - chr4.2:83267641-83267660 None:intergenic 45.0%
GAACCCTATCGAACCTCAAA+GGG + chr4.2:83266105-83266124 MS.gene99471:intron 45.0%
GACACCAAGATTGAGTAACG+CGG - chr4.2:83267262-83267281 None:intergenic 45.0%
GACTTCCATGCAGATGTTGA+TGG + chr4.2:83264477-83264496 MS.gene99471:CDS 45.0%
GAGGAAGTCACACACAACAT+TGG + chr4.2:83264529-83264548 MS.gene99471:CDS 45.0%
GATCAACCCTCTGGATCAAT+AGG - chr4.2:83266027-83266046 None:intergenic 45.0%
GCCACTACTCATATACAAGG+GGG - chr4.2:83266207-83266226 None:intergenic 45.0%
GGGTTTGTACGCTTTCATAG+AGG - chr4.2:83264120-83264139 None:intergenic 45.0%
GTGAAGAGACCCGCATTATA+TGG + chr4.2:83267540-83267559 MS.gene99471:CDS 45.0%
GTGGAGAATTAGGTGTGAAC+TGG + chr4.2:83265690-83265709 MS.gene99471:intron 45.0%
GTGGTCTATGCGAGAAAGAA+TGG + chr4.2:83265844-83265863 MS.gene99471:intron 45.0%
GTGGTGAGTGTTTGTACATG+AGG - chr4.2:83267324-83267343 None:intergenic 45.0%
TAGAGAACTTGGACTCTTCC+TGG + chr4.2:83267220-83267239 MS.gene99471:CDS 45.0%
TAGAGGCTAAGCTGTACTTG+AGG - chr4.2:83266918-83266937 None:intergenic 45.0%
TAGCCCACAAAAATTGGCAC+TGG - chr4.2:83264874-83264893 None:intergenic 45.0%
TAGGCTTGATGAACTCGCTA+AGG + chr4.2:83268193-83268212 MS.gene99471:CDS 45.0%
TCTTGGATCCATTGCAGTCA+AGG - chr4.2:83267484-83267503 None:intergenic 45.0%
TGAACCCTATCGAACCTCAA+AGG + chr4.2:83266104-83266123 MS.gene99471:intron 45.0%
TGCAAAAGCCTTGACTGCAA+TGG + chr4.2:83267473-83267492 MS.gene99471:CDS 45.0%
TTCACTTCAAGATCGCCAAG+GGG - chr4.2:83267639-83267658 None:intergenic 45.0%
TTGATGTCAAAGAGGCTGCT+AGG - chr4.2:83268088-83268107 None:intergenic 45.0%
! AGTGAGAAGTGGGAGAGTTT+TGG + chr4.2:83265956-83265975 MS.gene99471:intron 45.0%
! ATTTGGATTCTGAGGGTCAG+GGG + chr4.2:83264350-83264369 MS.gene99471:CDS 45.0%
! CTCCCAGTGCCAATTTTTGT+GGG + chr4.2:83264868-83264887 MS.gene99471:intron 45.0%
! GAATTTGGATTCTGAGGGTC+AGG + chr4.2:83264348-83264367 MS.gene99471:CDS 45.0%
! GTGAGAAGTGGGAGAGTTTT+GGG + chr4.2:83265957-83265976 MS.gene99471:intron 45.0%
! GTGTGAACTGGGAGAGTTTT+TGG + chr4.2:83265702-83265721 MS.gene99471:intron 45.0%
! TGGTTTGGACAACCAAACTG+TGG - chr4.2:83267288-83267307 None:intergenic 45.0%
!! ACAGTAGAAGTACCGGTAGT+GGG + chr4.2:83267414-83267433 MS.gene99471:CDS 45.0%
!! CTGATGCAAACTGGTTTGGT+AGG - chr4.2:83266993-83267012 None:intergenic 45.0%
!! GATAAGCATTGGTGAAGCTG+AGG + chr4.2:83267662-83267681 MS.gene99471:CDS 45.0%
!! GTAATCATAAGTGTCGGGGT+CGG - chr4.2:83264725-83264744 None:intergenic 45.0%
AAATCCCACTGTCCACCTGT+GGG - chr4.2:83264930-83264949 None:intergenic 50.0%
AACAGCGCGTGTGTTTGTGT+AGG - chr4.2:83266791-83266810 None:intergenic 50.0%
AGGCTAAGCTGTACTTGAGG+AGG - chr4.2:83266915-83266934 None:intergenic 50.0%
AGTAAGACCATGGAGTGTGC+AGG + chr4.2:83264802-83264821 MS.gene99471:intron 50.0%
ATGTCAAAGAGGCTGCTAGG+AGG - chr4.2:83268085-83268104 None:intergenic 50.0%
CCCCCCTTGTATATGAGTAG+TGG + chr4.2:83266203-83266222 MS.gene99471:intron 50.0%
CGACATCGCAACTGCAATTG+TGG - chr4.2:83265123-83265142 None:intergenic 50.0%
CTCTGACTGCTGATGCAAAC+TGG - chr4.2:83267002-83267021 None:intergenic 50.0%
CTTGGACTCTTCCTGGTGTA+CGG + chr4.2:83267227-83267246 MS.gene99471:CDS 50.0%
GAAATCACTCCTCCCACTAC+CGG - chr4.2:83267429-83267448 None:intergenic 50.0%
GCAGTCCCAAACAGCAATTG+CGG - chr4.2:83265178-83265197 None:intergenic 50.0%
GCTACTCGAACGGTAATGTC+TGG + chr4.2:83265324-83265343 MS.gene99471:intron 50.0%
GGGAATAGGGGTGGAGAATT+AGG + chr4.2:83265680-83265699 MS.gene99471:intron 50.0%
TAAGTAGGAGGGAATAGGGG+TGG + chr4.2:83265671-83265690 MS.gene99471:intron 50.0%
TTTAATTGGAGCCCCACAGG+TGG + chr4.2:83264915-83264934 MS.gene99471:intron 50.0%
! CCACAAAAATTGGCACTGGG+AGG - chr4.2:83264870-83264889 None:intergenic 50.0%
! CCTCCCAGTGCCAATTTTTG+TGG + chr4.2:83264867-83264886 MS.gene99471:intron 50.0%
! CTAGCTAGTCTGTACAGCTC+TGG + chr4.2:83264891-83264910 MS.gene99471:intron 50.0%
! GCACCGACACTTCTGATTGA+AGG + chr4.2:83264670-83264689 MS.gene99471:intron 50.0%
! TTGCGACCGCAATTGCTGTT+TGG + chr4.2:83265169-83265188 MS.gene99471:intron 50.0%
!! CACAGTAGAAGTACCGGTAG+TGG + chr4.2:83267413-83267432 MS.gene99471:CDS 50.0%
!! TGCGACCGCAATTGCTGTTT+GGG + chr4.2:83265170-83265189 MS.gene99471:intron 50.0%
AATCCCACTGTCCACCTGTG+GGG - chr4.2:83264929-83264948 None:intergenic 55.0%
ACCATGGAGTGTGCAGGCTT+GGG + chr4.2:83264808-83264827 MS.gene99471:intron 55.0%
CAAATCCCACTGTCCACCTG+TGG - chr4.2:83264931-83264950 None:intergenic 55.0%
CATGAGGAATGTTGAGGGGC+TGG - chr4.2:83267308-83267327 None:intergenic 55.0%
CGCTCCGCGTTACTCAATCT+TGG + chr4.2:83267255-83267274 MS.gene99471:CDS 55.0%
TCTGAGGGTCAGGGGAATAG+TGG + chr4.2:83264358-83264377 MS.gene99471:CDS 55.0%
! GGCTTTAATTGGAGCCCCAC+AGG + chr4.2:83264912-83264931 MS.gene99471:intron 55.0%
!! CTTGGTGTCGCACCACAGTT+TGG + chr4.2:83267273-83267292 MS.gene99471:CDS 55.0%
!! GGAATGTTGAGGGGCTGGTT+TGG - chr4.2:83267303-83267322 None:intergenic 55.0%
!! GTAGAAGTACCGGTAGTGGG+AGG + chr4.2:83267417-83267436 MS.gene99471:CDS 55.0%
AGTGTGCAGGCTTGGGACCT+TGG + chr4.2:83264815-83264834 MS.gene99471:intron 60.0%
GACCATGGAGTGTGCAGGCT+TGG + chr4.2:83264807-83264826 MS.gene99471:intron 60.0%
GAGGGTCAGGGGAATAGTGG+TGG + chr4.2:83264361-83264380 MS.gene99471:CDS 60.0%
TACAAGGGGGGAGCCCTTGA+AGG - chr4.2:83266194-83266213 None:intergenic 60.0%
TCCCAAGCCTGCACACTCCA+TGG - chr4.2:83264812-83264831 None:intergenic 60.0%
GAGCCCCACAGGTGGACAGT+GGG + chr4.2:83264923-83264942 MS.gene99471:intron 65.0%
GTCGGGGTCGGACACGACAT+GGG - chr4.2:83264713-83264732 None:intergenic 65.0%
TGTCGGGGTCGGACACGACA+TGG - chr4.2:83264714-83264733 None:intergenic 65.0%
GGAGCCCCACAGGTGGACAG+TGG + chr4.2:83264922-83264941 MS.gene99471:intron 70.0%
GGAGCGCGAGTCCGTACACC+AGG - chr4.2:83267241-83267260 None:intergenic 70.0%


Chromosome Type Strat End Strand Name
chr4.2 gene 83263887 83268235 83263887 ID=MS.gene99471
chr4.2 mRNA 83263887 83268235 83263887 ID=MS.gene99471.t1;Parent=MS.gene99471
chr4.2 exon 83263887 83264561 83263887 ID=MS.gene99471.t1.exon1;Parent=MS.gene99471.t1
chr4.2 CDS 83263887 83264561 83263887 ID=cds.MS.gene99471.t1;Parent=MS.gene99471.t1
chr4.2 exon 83266904 83267683 83266904 ID=MS.gene99471.t1.exon2;Parent=MS.gene99471.t1
chr4.2 CDS 83266904 83267683 83266904 ID=cds.MS.gene99471.t1;Parent=MS.gene99471.t1
chr4.2 exon 83268074 83268235 83268074 ID=MS.gene99471.t1.exon3;Parent=MS.gene99471.t1
chr4.2 CDS 83268074 83268235 83268074 ID=cds.MS.gene99471.t1;Parent=MS.gene99471.t1
Gene Sequence

>MS.gene99471

ATGGCTTCTGAAGAAGAGTCAAAAACGATTCCATTGAAAATCTTAATAGACAGAGAAAACAACAAAGTTGTCGCTGTTGAATCAACTAAAGACTTCGTTGACACTCTCTTCAGCTTCCTTTCTCTTCCACTTGCTACTATCATTCGCCTTTTAACTAACCAGAGCAATGATCAACAACTACAAGAACAACAATCATCAGAATCATCATCATTCCTTGGAAGCATCAAAAACCTCTATGAAAGCGTACAAACCCTCACTCCAAATGATGTTTGGAACCCTGTCTGCAAACAAATGTTGTTGAATCCGAAGAATCCATGTGAATCATTATGCAAGAAACTTTTCTTGAATATTGATGACACTGAATGGTCAAGTAAGTTTTTTGTGTGTGATGCTTGTAACAAGTTTACAACTTTTCAGAATCTTGATTGTACTTGTGGAAAACCCACTAATAAACAGCCTAAGAATTTGGATTCTGAGGGTCAGGGGAATAGTGGTGGTATTGCTGATGCTTTAAATGGGGTTTTTGTTAAGGACAATGGGTTTTTGTTTTTGGTGTATGATGATTTGAAGATTGTGCCAAGTTCTTTGGTGACTTCCATGCAGATGTTGATGGAATTGGGGTATTCTGATTTGAGTCAATTAGAGGAAGTCACACACAACATTGGAAAACAGGAGGTAATGGTGTTGTCTTTTGCAATATGTATTTATCTCACTTTTTTTCTTTTTCTTTTTCATTTCAAGTTTTGAGTAAACCCGAGAATTGGGATGTCACGTTACTCTGTTGCACCGACACTTCTGATTGAAGGTGTGTTTAGGTGTCTAACCCATGTCGTGTCCGACCCCGACACTTATGATTACACTGGATTATGTCATTTTCTCATAATTCTATTGACTTCATAATATGTGAGTTTGTAGAGTAAGACCATGGAGTGTGCAGGCTTGGGACCTTGGAGTATACTCTCAAAGTCTCGCATTCGAATCCTCCCAGTGCCAATTTTTGTGGGCTAGCTAGTCTGTACAGCTCTGGCTTTAATTGGAGCCCCACAGGTGGACAGTGGGATTTGTCTCCCAAATTAGTTGGTCCTTGAACTGCATACTGAGTTTTGAAAAAAAACTGTAGGTTAAGAAAATTCAAAAAAATATTTGAAACTATGAATCATTGTTCCAAATTGTGGTCGCAATTGTGGCTGCGATGCGAACCTTGATATTGTAGTAAAATGACAGTAAATGCAACCACAATTGCAGTTGCGATGTCGTTGCAGAGACCTCTAAAACCTTTATATTGCGACCGCAATTGCTGTTTGGGACTGCAACTTAGAACTATGTTGTTAATCGTTGGTTGTTTCAGTCTAAGATTATTTGGGACTCAGATCTTAAGCGTTATCATTTTAGTCTAGGCTTAGTTAGAATTCTGGTGTTGACTATGAGTTTCAAAATGCTACTCGAACGGTAATGTCTGGATCAAAATACCTGACGATTAATGAGTTCGAGATCTTTTCTAATTTTTTTTCTTGTTTCACAAACAATTTTAACAATGTCCTATAATTTATTGTTTGAACTTTGAACTTGCATTGGATCTTTAGACCATTCTTGAATTATGAACTTTCAACCTATATAACTTGATGCTTTTAGGGTAGGATGTATTTGGCGTAGTATCTGTTAAGAAGCTGATAGAAGAGCATTTATTAAGAAAGCCTATGTGAGAAAGAATATAAAGGAAAGTAAGGAGGGAAATAAATTGGTAATAACCAATAAGCTGCAAACTAACAGAAAAAATGATGTAATAAGTAGGAGGGAATAGGGGTGGAGAATTAGGTGTGAACTGGGAGAGTTTTTGGTGCATACTCTGAATCTTTAGATCGTACTTGAATTATGAATCTTTGTCCTAAAACTTAAGATAGTTTGGATTTGACATAGTAAGGGACATCTGTTAAGAACCTCATAAGAGTGCATTAAGGTGGTCTATGCGAGAAAGAATGGAAAGGAAAATAAGTAGGGAAATCGAGTGGTTGTAACTGATATAGCTGAGGGTAACAGAATGTAATAAGTAAGGGACTCTTACAGAAGTAAGTGAGAAGTGGGAGAGTTTTGGGCCACTCTTAAATTAGCCTGCAGTTTATAATTTTTTTCCTCTGATCCTATTGATCCAGAGGGTTGATCCTGATAAAGTTCATCTTTTTCCATTGAATTCCTATTGCAATTCCCCTCAAGTGTTGTTGAACCCTATCGAACCTCAAAGGGAATTAATTGGGTAAAAGAGGTTTTTACTGATTGAATTAAACAAAACCAAAGAGAAAGATTTCTCCTTCAAGGGCTCCCCCCTTGTATATGAGTAGTGGCTCTCTCTTTTTGATCAATACTAACATTTGCCATTAAAATAAACTTGGGGTCCGTGTACTTTGTGAAAACATTTACTATTTTCATTTCCTAAAATGTGTCAGTTGTATTTATTAATCAAGGAAATGTGTTGGTTGTATTTATTAACAAGGAAAATGTGTCCGTTGTATTTGTTAACAAGGAAAAAAAAGAATCTTGAATTAAACAATTGTCTTGCATTTCAAGAAAAATGAAAATATCGAAAAAACTATTTTCATTATTTCCTGAAATGCATCATCCCTAGCTAGCATTTTATCTTATCTCCATCACAAAGACTCACTTTAAAAGTCTTTTTTTCTCCTTATTAACAAGTAAACCTAAGACCTCTTGAAATAAAGAGCAAGTAAAACTAACACAAATTCTATAAAATGAAAATAGAAAATGGTTTCACAAAATTAAACGGGTCCTTACCTTAATGGCTCATTGTTTAATTAGTGTTTTTGTCATTGGCTTCAGACGAATGTTTCCTCAAACACTCCTTAGAGTAACTTTGGTATCAACCGTGCATTGAGATGTGTACGAACACCTACACAAACACACGCGCTGTTATTCTTACCGTTTCGTTTTAACATCTTGTATATATGCCAAGTAATGTAAACTTGTTTGTGAAATATTTTAACAAATACAATTTTGATGTACAGATGTTGAACCTCCTCAAGTACAGCTTAGCCTCTAATGAGCCATTGACAAATACAATTTTGAAAAGCAGCTCCAAGAAGAAAGATAACCTACCAAACCAGTTTGCATCAGCAGTCAGAGTAAAAACATGCACCCGTGACATTAAAATGGATGTTAAGCTAGTGCGAAGTAAATCTCAGAAAAAGATAATCTTTGCAGAAACCGGTGAAAACTTTGTTGACTTCATGTTTAGCTTCCTTACAATACCATTAGGGTCCATTATAAAGGTTTTGGATGGTAACTCTTTTGTTGGATGTGTTGATAATTTGTACAAGAGTGTAGAGAACTTGGACTCTTCCTGGTGTACGGACTCGCGCTCCGCGTTACTCAATCTTGGTGTCGCACCACAGTTTGGTTGTCCAAACCAGCCCCTCAACATTCCTCATGTACAAACACTCACCACTACATATTATTATGGTACAGGAACACCAAAGCAAGAAAGGGATTTACGCTATAGTAGTGCCCGTTATAACACAGTAGAAGTACCGGTAGTGGGAGGAGTGATTTCCAAGACAATGGGATCAATTTATAATGCAAAAGCCTTGACTGCAATGGATCCAAGATCTCCTAATAAATCGATTAAAGATGTGGTGGGATTTGTGAAGAGACCCGCATTATATGGTATAGGAGATGATCTAAAAGTAAAATCACTTTCTGCTAATTATTGCCTTTCATATTTGAAAGAATTGAGCTTTCCCCTTGGCGATCTTGAAGTGAAAGTGATAAGCATTGGTGAAGCTGAGGTAAATTGGCTATTATTACTGAATTTATAATTTTTTTCTTGAGTAAACAGTCACTTTAGTCCTTAAACATGTGAGACGATGTCACTATAGTCTTATTGTATCAAAATTATAAAAAACATCCCTGAATGTGTTTTCTTGTAGTAATTTTATTCACGAAAGTGACCAATGGAAGATACATCAGAAGACCAAACTAACCGATGAAAGACCACATACAAGGGTTAAACTGAATAACAAAAGACACATTCATGTATGTTTTCTTTTTTAAATTTTTATACATTCAGGATATATACTAACAATGACTCACACATTTAAGGACCAAAATGGTTATTTACTCTCTTGTTTTGTTTTCTTTGTTGTTGATACCCTTCCTTTATGGTTTGCACTTTGCAGGCTCTGAGCCTCCTAGCAGCCTCTTTGACATCAAAATTTACACTGACTAGTGGACTAGAAGAATTTTTTAATGTGCCAAAACAAGATTCAAATTTGACCTCAAAGTATGTTCAAACTAGTAGGCTTGATGAACTCGCTAAGGAGCCTAAACTAGAAGACTGA
Protein sequence

>MS.gene99471.t1

MASEEESKTIPLKILIDRENNKVVAVESTKDFVDTLFSFLSLPLATIIRLLTNQSNDQQLQEQQSSESSSFLGSIKNLYESVQTLTPNDVWNPVCKQMLLNPKNPCESLCKKLFLNIDDTEWSSKFFVCDACNKFTTFQNLDCTCGKPTNKQPKNLDSEGQGNSGGIADALNGVFVKDNGFLFLVYDDLKIVPSSLVTSMQMLMELGYSDLSQLEEVTHNIGKQEMLNLLKYSLASNEPLTNTILKSSSKKKDNLPNQFASAVRVKTCTRDIKMDVKLVRSKSQKKIIFAETGENFVDFMFSFLTIPLGSIIKVLDGNSFVGCVDNLYKSVENLDSSWCTDSRSALLNLGVAPQFGCPNQPLNIPHVQTLTTTYYYGTGTPKQERDLRYSSARYNTVEVPVVGGVISKTMGSIYNAKALTAMDPRSPNKSIKDVVGFVKRPALYGIGDDLKVKSLSANYCLSYLKELSFPLGDLEVKVISIGEAEALSLLAASLTSKFTLTSGLEEFFNVPKQDSNLTSKYVQTSRLDELAKEPKLED