Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene94756.t1 | RHN46337.1 | 60.1 | 431 | 90 | 5 | 2 | 366 | 13 | 427 | 8.00E-127 | 463.8 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene94756.t1 | A0A396H5V7 | 60.1 | 431 | 90 | 5 | 2 | 366 | 13 | 427 | 5.8e-127 | 463.8 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene94756.t1 | MTR_7g066310 | 51.861 | 403 | 167 | 5 | 3 | 380 | 6 | 406 | 1.08e-124 | 366 |
MS.gene94756.t1 | MTR_7g066260 | 63.509 | 285 | 75 | 5 | 116 | 380 | 217 | 492 | 4.72e-111 | 334 |
MS.gene94756.t1 | MTR_7g066260 | 79.130 | 115 | 24 | 0 | 2 | 116 | 13 | 127 | 3.92e-59 | 199 |
MS.gene94756.t1 | MTR_2g029400 | 47.765 | 425 | 119 | 13 | 3 | 356 | 13 | 405 | 6.14e-107 | 320 |
MS.gene94756.t1 | MTR_1g014060 | 45.758 | 389 | 163 | 9 | 13 | 366 | 9 | 384 | 3.81e-96 | 292 |
MS.gene94756.t1 | MTR_7g066360 | 59.075 | 281 | 79 | 5 | 118 | 379 | 215 | 478 | 2.34e-87 | 273 |
MS.gene94756.t1 | MTR_7g066360 | 72.222 | 108 | 29 | 1 | 4 | 110 | 14 | 121 | 7.36e-44 | 159 |
MS.gene94756.t1 | MTR_7g066340 | 56.934 | 274 | 98 | 4 | 116 | 380 | 214 | 476 | 1.29e-86 | 271 |
MS.gene94756.t1 | MTR_7g066340 | 63.559 | 118 | 41 | 1 | 3 | 118 | 11 | 128 | 8.83e-44 | 158 |
MS.gene94756.t1 | MTR_7g066290 | 59.363 | 251 | 64 | 3 | 118 | 366 | 219 | 433 | 8.24e-81 | 254 |
MS.gene94756.t1 | MTR_7g066290 | 72.174 | 115 | 32 | 0 | 2 | 116 | 13 | 127 | 1.00e-52 | 181 |
MS.gene94756.t1 | MTR_7g066400 | 52.590 | 251 | 106 | 3 | 118 | 362 | 190 | 433 | 6.88e-79 | 250 |
MS.gene94756.t1 | MTR_7g066400 | 59.649 | 114 | 29 | 2 | 2 | 114 | 10 | 107 | 7.90e-35 | 133 |
MS.gene94756.t1 | MTR_7g063920 | 39.401 | 434 | 178 | 8 | 4 | 366 | 11 | 430 | 3.35e-78 | 248 |
MS.gene94756.t1 | MTR_7g066350 | 52.747 | 273 | 107 | 3 | 96 | 362 | 189 | 445 | 2.77e-73 | 236 |
MS.gene94756.t1 | MTR_7g066350 | 72.500 | 120 | 31 | 2 | 3 | 120 | 8 | 127 | 4.73e-50 | 175 |
MS.gene94756.t1 | MTR_1g041315 | 56.170 | 235 | 91 | 3 | 118 | 350 | 227 | 451 | 5.94e-72 | 233 |
MS.gene94756.t1 | MTR_1g041315 | 63.025 | 119 | 43 | 1 | 3 | 120 | 13 | 131 | 3.99e-43 | 157 |
MS.gene94756.t1 | MTR_7g066280 | 39.480 | 423 | 121 | 10 | 83 | 380 | 1 | 413 | 1.41e-71 | 230 |
MS.gene94756.t1 | MTR_7g066580 | 48.592 | 284 | 100 | 5 | 118 | 363 | 167 | 442 | 8.41e-71 | 229 |
MS.gene94756.t1 | MTR_7g066580 | 70.642 | 109 | 31 | 1 | 10 | 117 | 1 | 109 | 3.81e-45 | 161 |
MS.gene94756.t1 | MTR_7g066570 | 49.291 | 282 | 104 | 4 | 116 | 366 | 207 | 480 | 6.21e-70 | 230 |
MS.gene94756.t1 | MTR_7g066570 | 72.414 | 116 | 31 | 1 | 3 | 117 | 13 | 128 | 9.72e-51 | 179 |
MS.gene94756.t1 | MTR_7g066680 | 46.557 | 305 | 95 | 6 | 118 | 362 | 38 | 334 | 1.02e-69 | 223 |
MS.gene94756.t1 | MTR_7g066430 | 33.399 | 509 | 204 | 13 | 1 | 382 | 1 | 501 | 1.18e-67 | 222 |
MS.gene94756.t1 | MTR_7g012680 | 51.908 | 262 | 106 | 6 | 116 | 366 | 193 | 445 | 9.44e-64 | 211 |
MS.gene94756.t1 | MTR_7g012680 | 75.652 | 115 | 28 | 0 | 3 | 117 | 13 | 127 | 5.37e-57 | 193 |
MS.gene94756.t1 | MTR_7g058710 | 45.541 | 314 | 126 | 7 | 96 | 377 | 184 | 484 | 5.64e-63 | 209 |
MS.gene94756.t1 | MTR_7g058710 | 66.667 | 117 | 26 | 2 | 3 | 118 | 11 | 115 | 1.61e-46 | 166 |
MS.gene94756.t1 | MTR_7g058710 | 34.234 | 111 | 65 | 3 | 2 | 109 | 251 | 356 | 9.48e-11 | 63.5 |
MS.gene94756.t1 | MTR_7g066490 | 34.483 | 435 | 170 | 13 | 4 | 366 | 16 | 407 | 9.87e-54 | 183 |
MS.gene94756.t1 | MTR_7g066480 | 32.812 | 448 | 176 | 11 | 3 | 366 | 15 | 421 | 1.34e-53 | 183 |
MS.gene94756.t1 | MTR_7g058700 | 43.382 | 272 | 98 | 4 | 99 | 366 | 702 | 921 | 1.07e-52 | 188 |
MS.gene94756.t1 | MTR_7g058700 | 69.903 | 103 | 16 | 2 | 16 | 117 | 531 | 619 | 1.13e-37 | 145 |
MS.gene94756.t1 | MTR_7g066390 | 56.051 | 157 | 38 | 2 | 215 | 370 | 1 | 127 | 3.67e-47 | 158 |
MS.gene94756.t1 | MTR_7g066410 | 39.100 | 289 | 127 | 6 | 118 | 366 | 233 | 512 | 1.18e-46 | 167 |
MS.gene94756.t1 | MTR_7g066410 | 54.783 | 115 | 51 | 1 | 4 | 117 | 10 | 124 | 9.70e-39 | 145 |
MS.gene94756.t1 | MTR_7g066410 | 35.714 | 126 | 75 | 2 | 4 | 128 | 284 | 404 | 6.51e-12 | 67.4 |
MS.gene94756.t1 | MTR_7g063720 | 41.096 | 219 | 118 | 3 | 159 | 366 | 8 | 226 | 3.52e-45 | 156 |
MS.gene94756.t1 | MTR_7g063720 | 32.743 | 113 | 70 | 2 | 4 | 115 | 23 | 130 | 6.08e-13 | 68.6 |
MS.gene94756.t1 | MTR_7g062280 | 39.568 | 278 | 123 | 6 | 118 | 366 | 224 | 485 | 7.59e-45 | 161 |
MS.gene94756.t1 | MTR_7g062280 | 53.509 | 114 | 52 | 1 | 4 | 116 | 10 | 123 | 5.88e-30 | 120 |
MS.gene94756.t1 | MTR_7g062280 | 43.529 | 85 | 42 | 2 | 4 | 87 | 266 | 345 | 5.80e-13 | 70.5 |
MS.gene94756.t1 | MTR_3g065200 | 32.857 | 420 | 200 | 12 | 3 | 353 | 2 | 408 | 1.04e-44 | 160 |
MS.gene94756.t1 | MTR_3g007740 | 42.146 | 261 | 125 | 7 | 118 | 366 | 196 | 442 | 9.90e-44 | 157 |
MS.gene94756.t1 | MTR_3g007740 | 52.727 | 110 | 39 | 2 | 4 | 112 | 9 | 106 | 7.11e-25 | 105 |
MS.gene94756.t1 | MTR_3g007740 | 28.986 | 207 | 124 | 7 | 173 | 359 | 8 | 211 | 5.68e-12 | 67.4 |
MS.gene94756.t1 | MTR_4g017470 | 29.025 | 472 | 217 | 12 | 5 | 369 | 13 | 473 | 3.19e-43 | 157 |
MS.gene94756.t1 | MTR_4g017470 | 31.818 | 110 | 65 | 3 | 4 | 110 | 234 | 336 | 1.45e-12 | 69.3 |
MS.gene94756.t1 | MTR_7g063670 | 40.385 | 260 | 128 | 6 | 118 | 366 | 208 | 451 | 7.95e-43 | 155 |
MS.gene94756.t1 | MTR_7g063670 | 46.218 | 119 | 46 | 3 | 5 | 117 | 16 | 122 | 6.82e-22 | 97.4 |
MS.gene94756.t1 | MTR_7g063820 | 36.610 | 295 | 134 | 6 | 118 | 380 | 212 | 485 | 1.26e-42 | 155 |
MS.gene94756.t1 | MTR_7g063820 | 55.263 | 114 | 49 | 2 | 5 | 117 | 11 | 123 | 1.30e-27 | 114 |
MS.gene94756.t1 | MTR_7g062300 | 38.095 | 273 | 128 | 6 | 118 | 364 | 214 | 471 | 5.71e-42 | 153 |
MS.gene94756.t1 | MTR_7g062300 | 54.867 | 113 | 50 | 1 | 4 | 115 | 12 | 124 | 3.73e-31 | 124 |
MS.gene94756.t1 | MTR_7g062300 | 44.706 | 85 | 41 | 2 | 4 | 87 | 256 | 335 | 2.16e-13 | 71.6 |
MS.gene94756.t1 | MTR_7g100420 | 33.673 | 392 | 198 | 11 | 5 | 367 | 40 | 398 | 3.30e-40 | 147 |
MS.gene94756.t1 | MTR_4g019310 | 35.811 | 296 | 135 | 8 | 118 | 379 | 223 | 497 | 1.20e-38 | 145 |
MS.gene94756.t1 | MTR_4g019310 | 45.161 | 124 | 53 | 3 | 7 | 115 | 11 | 134 | 3.73e-25 | 107 |
MS.gene94756.t1 | MTR_7g063660 | 34.892 | 278 | 139 | 4 | 118 | 366 | 207 | 471 | 1.90e-38 | 144 |
MS.gene94756.t1 | MTR_7g063660 | 57.265 | 117 | 49 | 1 | 4 | 119 | 9 | 125 | 2.49e-36 | 138 |
MS.gene94756.t1 | MTR_7g063660 | 29.545 | 220 | 125 | 7 | 169 | 359 | 4 | 222 | 3.57e-13 | 71.2 |
MS.gene94756.t1 | MTR_7g063660 | 36.111 | 108 | 63 | 2 | 4 | 110 | 250 | 352 | 2.00e-12 | 68.9 |
MS.gene94756.t1 | MTR_7g063830 | 39.147 | 258 | 119 | 5 | 118 | 366 | 210 | 438 | 5.32e-38 | 142 |
MS.gene94756.t1 | MTR_7g063830 | 53.271 | 107 | 49 | 1 | 5 | 110 | 11 | 117 | 2.00e-29 | 118 |
MS.gene94756.t1 | MTR_7g063830 | 28.829 | 222 | 126 | 8 | 169 | 359 | 5 | 225 | 5.81e-12 | 67.4 |
MS.gene94756.t1 | MTR_7g063840 | 35.870 | 276 | 134 | 5 | 118 | 366 | 208 | 467 | 2.96e-37 | 140 |
MS.gene94756.t1 | MTR_7g063840 | 53.571 | 112 | 51 | 1 | 5 | 115 | 11 | 122 | 3.87e-29 | 118 |
MS.gene94756.t1 | MTR_7g063840 | 29.680 | 219 | 122 | 8 | 171 | 359 | 7 | 223 | 7.12e-11 | 63.9 |
MS.gene94756.t1 | MTR_7g063880 | 52.778 | 144 | 61 | 2 | 4 | 140 | 11 | 154 | 1.44e-35 | 136 |
MS.gene94756.t1 | MTR_7g063880 | 34.783 | 276 | 130 | 9 | 118 | 366 | 210 | 462 | 8.37e-31 | 122 |
MS.gene94756.t1 | MTR_7g063880 | 29.249 | 253 | 127 | 9 | 169 | 383 | 6 | 244 | 1.02e-11 | 66.6 |
MS.gene94756.t1 | MTR_7g063900 | 37.847 | 288 | 125 | 6 | 118 | 366 | 210 | 482 | 1.53e-35 | 136 |
MS.gene94756.t1 | MTR_7g063900 | 58.261 | 115 | 47 | 1 | 4 | 117 | 10 | 124 | 4.73e-34 | 132 |
MS.gene94756.t1 | MTR_7g063900 | 28.251 | 223 | 126 | 9 | 168 | 359 | 6 | 225 | 3.18e-14 | 74.3 |
MS.gene94756.t1 | MTR_7g063890 | 54.783 | 115 | 51 | 1 | 4 | 117 | 27 | 141 | 8.72e-32 | 126 |
MS.gene94756.t1 | MTR_7g063890 | 37.153 | 288 | 127 | 8 | 118 | 366 | 226 | 498 | 1.99e-27 | 113 |
MS.gene94756.t1 | MTR_7g063890 | 32.870 | 216 | 116 | 8 | 173 | 359 | 26 | 241 | 5.85e-15 | 76.6 |
MS.gene94756.t1 | MTR_4g017830 | 33.333 | 294 | 145 | 9 | 118 | 369 | 220 | 504 | 1.27e-30 | 123 |
MS.gene94756.t1 | MTR_4g017830 | 40.741 | 135 | 72 | 3 | 5 | 131 | 13 | 147 | 2.36e-21 | 96.3 |
MS.gene94756.t1 | MTR_7g062270 | 50.000 | 112 | 55 | 1 | 5 | 115 | 11 | 122 | 2.01e-27 | 112 |
MS.gene94756.t1 | MTR_4g017610 | 47.863 | 117 | 51 | 3 | 7 | 113 | 16 | 132 | 1.06e-25 | 108 |
MS.gene94756.t1 | MTR_4g017610 | 27.536 | 276 | 152 | 6 | 116 | 363 | 221 | 476 | 1.36e-18 | 87.4 |
MS.gene94756.t1 | MTR_4g017410 | 47.107 | 121 | 52 | 4 | 5 | 113 | 10 | 130 | 1.77e-25 | 108 |
MS.gene94756.t1 | MTR_4g017410 | 29.474 | 285 | 169 | 8 | 118 | 379 | 225 | 500 | 4.96e-21 | 95.1 |
MS.gene94756.t1 | MTR_7g063850 | 32.743 | 226 | 110 | 6 | 174 | 366 | 66 | 282 | 1.15e-24 | 102 |
MS.gene94756.t1 | MTR_4g017550 | 32.639 | 288 | 138 | 11 | 118 | 363 | 197 | 470 | 6.31e-24 | 103 |
MS.gene94756.t1 | MTR_4g017550 | 37.273 | 110 | 61 | 3 | 31 | 133 | 18 | 126 | 6.72e-13 | 70.1 |
MS.gene94756.t1 | MTR_4g017440 | 30.847 | 295 | 154 | 8 | 114 | 369 | 222 | 505 | 8.56e-24 | 103 |
MS.gene94756.t1 | MTR_4g017440 | 45.528 | 123 | 53 | 4 | 5 | 113 | 15 | 137 | 1.47e-23 | 102 |
MS.gene94756.t1 | MTR_4g019340 | 31.395 | 258 | 144 | 7 | 118 | 354 | 256 | 501 | 1.61e-23 | 102 |
MS.gene94756.t1 | MTR_4g019340 | 45.082 | 122 | 54 | 2 | 5 | 113 | 39 | 160 | 1.87e-23 | 102 |
MS.gene94756.t1 | MTR_4g019340 | 36.458 | 96 | 54 | 2 | 7 | 102 | 306 | 394 | 2.56e-11 | 65.5 |
MS.gene94756.t1 | MTR_7g063690 | 34.978 | 223 | 106 | 5 | 5 | 201 | 13 | 222 | 4.31e-22 | 94.7 |
MS.gene94756.t1 | MTR_2g067310 | 49.074 | 108 | 46 | 3 | 14 | 120 | 57 | 156 | 2.55e-20 | 89.7 |
MS.gene94756.t1 | MTR_4g019240 | 40.146 | 137 | 71 | 5 | 5 | 133 | 14 | 147 | 5.55e-20 | 87.0 |
MS.gene94756.t1 | MTR_4g019330 | 34.536 | 194 | 88 | 6 | 188 | 379 | 32 | 188 | 2.10e-19 | 85.5 |
MS.gene94756.t1 | MTR_8g023240 | 28.014 | 282 | 147 | 9 | 114 | 358 | 219 | 481 | 1.29e-15 | 79.0 |
MS.gene94756.t1 | MTR_7g063760 | 53.846 | 65 | 29 | 1 | 303 | 366 | 3 | 67 | 1.46e-15 | 71.6 |
MS.gene94756.t1 | MTR_1g115450 | 38.824 | 85 | 47 | 1 | 4 | 88 | 7 | 86 | 1.49e-14 | 70.9 |
MS.gene94756.t1 | MTR_0150s0010 | 44.186 | 86 | 43 | 2 | 3 | 88 | 9 | 89 | 7.18e-14 | 71.2 |
MS.gene94756.t1 | MTR_1g115440 | 41.176 | 85 | 45 | 1 | 3 | 87 | 10 | 89 | 2.95e-13 | 69.3 |
MS.gene94756.t1 | MTR_8g445860 | 33.333 | 114 | 65 | 3 | 4 | 112 | 13 | 120 | 3.59e-13 | 68.9 |
MS.gene94756.t1 | MTR_1g115455 | 38.824 | 85 | 47 | 1 | 4 | 88 | 9 | 88 | 1.25e-12 | 67.4 |
MS.gene94756.t1 | MTR_1g115470 | 40.698 | 86 | 46 | 1 | 6 | 91 | 8 | 88 | 5.33e-12 | 67.4 |
MS.gene94756.t1 | MTR_8g445920 | 38.095 | 84 | 47 | 1 | 3 | 86 | 9 | 87 | 9.35e-12 | 62.0 |
MS.gene94756.t1 | MTR_8g044890 | 38.095 | 84 | 47 | 1 | 3 | 86 | 9 | 87 | 9.35e-12 | 62.0 |
MS.gene94756.t1 | MTR_0150s0030 | 36.471 | 85 | 48 | 2 | 4 | 87 | 8 | 87 | 1.68e-11 | 63.5 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene94756.t1 | AT3G09110 | 44.144 | 111 | 61 | 1 | 6 | 115 | 11 | 121 | 4.53e-24 | 102 |
MS.gene94756.t1 | AT5G01140 | 29.592 | 294 | 169 | 6 | 118 | 388 | 193 | 471 | 8.38e-24 | 103 |
MS.gene94756.t1 | AT3G09120 | 45.794 | 107 | 57 | 1 | 4 | 110 | 6 | 111 | 2.01e-23 | 99.8 |
MS.gene94756.t1 | AT5G01120 | 43.119 | 109 | 61 | 1 | 5 | 112 | 10 | 118 | 9.43e-23 | 100 |
MS.gene94756.t1 | AT5G43240 | 42.202 | 109 | 62 | 1 | 5 | 112 | 10 | 118 | 1.73e-22 | 99.4 |
MS.gene94756.t1 | AT5G43240 | 27.864 | 323 | 179 | 7 | 95 | 379 | 205 | 511 | 7.81e-16 | 79.3 |
MS.gene94756.t1 | AT5G43240 | 42.202 | 109 | 62 | 1 | 5 | 112 | 10 | 118 | 1.73e-22 | 99.4 |
MS.gene94756.t1 | AT5G43240 | 27.864 | 323 | 179 | 7 | 95 | 379 | 205 | 511 | 7.81e-16 | 79.3 |
MS.gene94756.t1 | AT5G43240 | 42.202 | 109 | 62 | 1 | 5 | 112 | 10 | 118 | 1.73e-22 | 99.4 |
MS.gene94756.t1 | AT5G43240 | 27.864 | 323 | 179 | 7 | 95 | 379 | 205 | 511 | 7.81e-16 | 79.3 |
MS.gene94756.t1 | AT5G01150 | 42.342 | 111 | 63 | 1 | 6 | 115 | 11 | 121 | 1.03e-21 | 97.1 |
MS.gene94756.t1 | AT5G01150 | 28.028 | 289 | 166 | 7 | 118 | 379 | 213 | 486 | 1.33e-13 | 72.4 |
MS.gene94756.t1 | AT3G09140 | 40.351 | 114 | 67 | 1 | 4 | 116 | 9 | 122 | 3.30e-21 | 95.5 |
MS.gene94756.t1 | AT3G09140 | 29.496 | 278 | 141 | 9 | 118 | 359 | 228 | 486 | 7.85e-16 | 79.3 |
MS.gene94756.t1 | AT3G09140 | 40.351 | 114 | 67 | 1 | 4 | 116 | 9 | 122 | 3.41e-21 | 95.5 |
MS.gene94756.t1 | AT3G09140 | 29.181 | 281 | 144 | 9 | 118 | 362 | 256 | 517 | 8.94e-16 | 79.3 |
MS.gene94756.t1 | AT5G01130 | 41.284 | 109 | 64 | 0 | 4 | 112 | 9 | 117 | 1.15e-19 | 90.9 |
MS.gene94756.t1 | AT5G01130 | 27.473 | 273 | 161 | 8 | 118 | 379 | 205 | 451 | 5.66e-17 | 82.8 |
MS.gene94756.t1 | AT5G37320 | 40.909 | 110 | 61 | 3 | 5 | 112 | 12 | 119 | 1.50e-17 | 84.7 |
MS.gene94756.t1 | AT5G43240 | 27.864 | 323 | 179 | 7 | 95 | 379 | 61 | 367 | 6.30e-16 | 79.0 |
Find 79 sgRNAs with CRISPR-Local
Find 158 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CAACTTCCTCAATGTCATTT+AGG | 0.107785 | 7.1:-35608882 | None:intergenic |
TTCCAATCCAAGATTGTTAT+TGG | 0.123972 | 7.1:+35608367 | MS.gene94756:CDS |
GGCTTCTTCAGGTTGCTTAC+TGG | 0.162558 | 7.1:-35609913 | None:intergenic |
ACAATCTTGGATTGGAATAT+TGG | 0.162803 | 7.1:-35608361 | None:intergenic |
GATCCCAAATCCTCTGTTTC+TGG | 0.168797 | 7.1:+35608754 | MS.gene94756:CDS |
GCTTCTTAACATTGCCTTTA+GGG | 0.201640 | 7.1:+35607676 | MS.gene94756:CDS |
AATATTGAAGCAATGAAATT+TGG | 0.225545 | 7.1:+35607729 | MS.gene94756:CDS |
CAAGACCTCACCATCTTCTT+TGG | 0.236047 | 7.1:-35608722 | None:intergenic |
TCCTCCAGAAACAGAGGATT+TGG | 0.249852 | 7.1:-35608758 | None:intergenic |
GAGGAAGTTGTTGTTAATAT+TGG | 0.279579 | 7.1:+35608895 | MS.gene94756:CDS |
AACTTCCTCAATGTCATTTA+GGG | 0.292513 | 7.1:-35608881 | None:intergenic |
CACCGGACCAACAACGATTA+TGG | 0.300329 | 7.1:+35608786 | MS.gene94756:CDS |
GCCCTTTCCAATAACAATCT+TGG | 0.305947 | 7.1:-35608374 | None:intergenic |
AGCTTCTTAACATTGCCTTT+AGG | 0.310196 | 7.1:+35607675 | MS.gene94756:CDS |
AAGGGCCTCAAACACTTCTT+AGG | 0.339017 | 7.1:+35609065 | MS.gene94756:CDS |
GCTTCTTCAGGTTGCTTACT+GGG | 0.342668 | 7.1:-35609912 | None:intergenic |
CTCAACATCTGCTTTGACTA+AGG | 0.358011 | 7.1:+35609046 | MS.gene94756:CDS |
TCCAAGATTGTTATTGGAAA+GGG | 0.362905 | 7.1:+35608373 | MS.gene94756:CDS |
CGAAGTTACATTGAAAGTTA+TGG | 0.386783 | 7.1:+35607587 | MS.gene94756:CDS |
TCAACTAGAAACATTCTGTT+TGG | 0.399046 | 7.1:+35608448 | MS.gene94756:CDS |
CACCATAATCGTTGTTGGTC+CGG | 0.399321 | 7.1:-35608788 | None:intergenic |
ATCTTGATGGGAAATATCTA+TGG | 0.417112 | 7.1:+35607784 | MS.gene94756:CDS |
TTCCAATAACAATCTTGGAT+TGG | 0.433827 | 7.1:-35608369 | None:intergenic |
TGGTTCCTTACTTCATATGT+AGG | 0.448885 | 7.1:-35608667 | None:intergenic |
TGAGTCCAGAGAAGTGTTTA+CGG | 0.451900 | 7.1:+35608602 | MS.gene94756:CDS |
AAAGTTCTGTATGCTGAGGC+TGG | 0.459437 | 7.1:+35607627 | MS.gene94756:CDS |
CCTCCAGAAACAGAGGATTT+GGG | 0.461664 | 7.1:-35608757 | None:intergenic |
CAAAGCGTGCAAGATCTTGA+TGG | 0.464561 | 7.1:+35607771 | MS.gene94756:CDS |
CTACCTTCCATGGAGTTCCT+TGG | 0.467829 | 7.1:-35607837 | None:intergenic |
TCTGTCACCATAATCGTTGT+TGG | 0.469184 | 7.1:-35608793 | None:intergenic |
GTTCTTACTTCCAAAGAAGA+TGG | 0.471620 | 7.1:+35608712 | MS.gene94756:CDS |
TCTGACCGTAAACACTTCTC+TGG | 0.472700 | 7.1:-35608607 | None:intergenic |
ATCCAAGATTGTTATTGGAA+AGG | 0.514429 | 7.1:+35608372 | MS.gene94756:CDS |
AAGCCCTCATCTGCATATGT+TGG | 0.515996 | 7.1:-35608319 | None:intergenic |
CTTCTGACAACTACCTTCCA+TGG | 0.518420 | 7.1:-35607847 | None:intergenic |
TGTTGTTAATATTGGAGTGA+AGG | 0.518877 | 7.1:+35608903 | MS.gene94756:CDS |
GGAGTGTTGCAAATGCTAGA+AGG | 0.519900 | 7.1:+35608529 | MS.gene94756:CDS |
GCAGATGCTGATAAAACTAC+TGG | 0.526501 | 7.1:+35608417 | MS.gene94756:CDS |
TCTCACCTAAGAAGTGTTTG+AGG | 0.528646 | 7.1:-35609070 | None:intergenic |
ATTAAGCTTCAGGAAACCTA+TGG | 0.529901 | 7.1:+35609948 | MS.gene94756:CDS |
GATTATGGTGACAGACGACT+TGG | 0.531122 | 7.1:+35608801 | MS.gene94756:CDS |
ACTCCAATGTCATCGTTTGA+TGG | 0.532598 | 7.1:+35608829 | MS.gene94756:CDS |
AGTCTTGCAATAGTCCCTAA+AGG | 0.541322 | 7.1:-35607690 | None:intergenic |
CAGAGGAGTCTTCGAGAGCA+AGG | 0.548998 | 7.1:-35608272 | None:intergenic |
TGTTAATATTGGAGTGAAGG+AGG | 0.559250 | 7.1:+35608906 | MS.gene94756:CDS |
AAGTTCTGTATGCTGAGGCT+GGG | 0.563406 | 7.1:+35607628 | MS.gene94756:CDS |
AAAGCGTGCAAGATCTTGAT+GGG | 0.571030 | 7.1:+35607772 | MS.gene94756:CDS |
TCAACATCTGCTTTGACTAA+GGG | 0.573073 | 7.1:+35609047 | MS.gene94756:CDS |
AGTACTTTACTTGTGATGAC+TGG | 0.573263 | 7.1:+35607901 | MS.gene94756:CDS |
TTCACATCTAGAAAGAATGA+AGG | 0.586950 | 7.1:+35608855 | MS.gene94756:CDS |
TACTTCCAAAGAAGATGGTG+AGG | 0.589884 | 7.1:+35608717 | MS.gene94756:CDS |
ATTGGCTTACCCTCTTCAGA+TGG | 0.594507 | 7.1:-35608343 | None:intergenic |
CTAATCAGTCATCACACCAT+AGG | 0.595084 | 7.1:-35609964 | None:intergenic |
GAAACCAACATATGCAGATG+AGG | 0.595214 | 7.1:+35608315 | MS.gene94756:CDS |
TGAGGGCTTACCATCTGAAG+AGG | 0.596168 | 7.1:+35608333 | MS.gene94756:CDS |
GTTTCTGGAGGATATGTCAC+CGG | 0.600751 | 7.1:+35608769 | MS.gene94756:CDS |
ATCTGCTTACCCTCTTCAGA+TGG | 0.600894 | 7.1:-35608400 | None:intergenic |
TGGGAAATATCTATGGTCAA+AGG | 0.602410 | 7.1:+35607791 | MS.gene94756:CDS |
ACTCAAGCCAAGGAACTCCA+TGG | 0.606428 | 7.1:+35607830 | MS.gene94756:CDS |
TTTAAGATAAAGTCTGTCAG+AGG | 0.610371 | 7.1:-35608289 | None:intergenic |
ACACCATCAAACGATGACAT+TGG | 0.611312 | 7.1:-35608832 | None:intergenic |
AAGAAATGCTACTCAAGCCA+AGG | 0.611550 | 7.1:+35607820 | MS.gene94756:CDS |
AAAGGGCTTACCATCTGAAG+AGG | 0.612181 | 7.1:+35608390 | MS.gene94756:CDS |
CATTCTGTTTGGTATAGCAG+AGG | 0.612193 | 7.1:+35608459 | MS.gene94756:CDS |
CCCAAATCCTCTGTTTCTGG+AGG | 0.614349 | 7.1:+35608757 | MS.gene94756:CDS |
AGGGACTATTGCAAGACTAG+TGG | 0.623463 | 7.1:+35607695 | MS.gene94756:CDS |
AAACAAAGTTCTGTATGCTG+AGG | 0.630952 | 7.1:+35607623 | MS.gene94756:CDS |
AGTTACATTGAAAGTTATGG+TGG | 0.634199 | 7.1:+35607590 | MS.gene94756:CDS |
AAACCAACATATGCAGATGA+GGG | 0.635875 | 7.1:+35608316 | MS.gene94756:CDS |
AAGCCAAGGAACTCCATGGA+AGG | 0.641089 | 7.1:+35607834 | MS.gene94756:CDS |
TCACAAGTAAAGTACTGCAC+CGG | 0.646572 | 7.1:-35607894 | None:intergenic |
ACTTCCTCAATGTCATTTAG+GGG | 0.650557 | 7.1:-35608880 | None:intergenic |
ACTGAACATCGATGACACAC+CGG | 0.657838 | 7.1:+35607875 | MS.gene94756:CDS |
GACATATCCTCCAGAAACAG+AGG | 0.657900 | 7.1:-35608764 | None:intergenic |
CTTCCTCAATGTCATTTAGG+GGG | 0.660364 | 7.1:-35608879 | None:intergenic |
GAGGGCTTACCATCTGAAGA+GGG | 0.666261 | 7.1:+35608334 | MS.gene94756:CDS |
AAGGGCTTACCATCTGAAGA+GGG | 0.666261 | 7.1:+35608391 | MS.gene94756:CDS |
CTTAGTCAAAGCAGATGTTG+AGG | 0.666305 | 7.1:-35609045 | None:intergenic |
ATTTGCAACACTCCTCCTAG+AGG | 0.676162 | 7.1:-35608520 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | CATAGAAAAAAAAAAAAAAA+AGG | + | chr7.1:35609681-35609700 | MS.gene94756:intron | 10.0% |
!! | AAGTAATTATCTAAAGATAA+AGG | - | chr7.1:35609316-35609335 | None:intergenic | 15.0% |
!! | ATATTTATGTTTATATGTGT+AGG | + | chr7.1:35608228-35608247 | MS.gene94756:intron | 15.0% |
!! | TAAAAAATGGTTAAAAAGAT+TGG | + | chr7.1:35609463-35609482 | MS.gene94756:intron | 15.0% |
!! | AATATTGAAGCAATGAAATT+TGG | + | chr7.1:35607729-35607748 | MS.gene94756:CDS | 20.0% |
!! | AGTAAAAACTTAAATTTCCA+AGG | - | chr7.1:35609202-35609221 | None:intergenic | 20.0% |
!! | TATGATTATTAAAGCTAATG+TGG | + | chr7.1:35609608-35609627 | MS.gene94756:intron | 20.0% |
!!! | AAGCTTAATTTTTCTTCTTT+TGG | - | chr7.1:35609937-35609956 | None:intergenic | 20.0% |
! | AAGAAGAAAAATTAAGCTTC+AGG | + | chr7.1:35609938-35609957 | MS.gene94756:CDS | 25.0% |
! | AGTAAGTTTGCATTAAAAAG+TGG | - | chr7.1:35609246-35609265 | None:intergenic | 25.0% |
! | CAAGGCAAAATTTCTATTAA+AGG | - | chr7.1:35609184-35609203 | None:intergenic | 25.0% |
! | GAAAGATTGAAATGTAAGAA+GGG | + | chr7.1:35609706-35609725 | MS.gene94756:intron | 25.0% |
! | TACCATCTTCTCATAAAAAA+TGG | + | chr7.1:35609450-35609469 | MS.gene94756:intron | 25.0% |
! | TCATATGTAGGAAAAATTTG+AGG | - | chr7.1:35608658-35608677 | None:intergenic | 25.0% |
! | TGAAAGATTGAAATGTAAGA+AGG | + | chr7.1:35609705-35609724 | MS.gene94756:intron | 25.0% |
! | TTCGTCGTACATTATAATTA+GGG | + | chr7.1:35609119-35609138 | MS.gene94756:intron | 25.0% |
! | TTTAACAAATCCATTGTCAA+AGG | - | chr7.1:35608003-35608022 | None:intergenic | 25.0% |
! | TTTCGTCGTACATTATAATT+AGG | + | chr7.1:35609118-35609137 | MS.gene94756:intron | 25.0% |
!! | CTTTAATAGAAATTTTGCCT+TGG | + | chr7.1:35609182-35609201 | MS.gene94756:intron | 25.0% |
!! | GATTGCATAATTTGTATCTA+TGG | + | chr7.1:35608983-35609002 | MS.gene94756:intron | 25.0% |
!! | TCTTGTTAACAGTATTGAAT+TGG | + | chr7.1:35609789-35609808 | MS.gene94756:intron | 25.0% |
!! | TTTTTCCTACATATGAAGTA+AGG | + | chr7.1:35608662-35608681 | MS.gene94756:CDS | 25.0% |
!!! | AACCATTTTTTATGAGAAGA+TGG | - | chr7.1:35609455-35609474 | None:intergenic | 25.0% |
!!! | ACGACGAAATTTTGATAATT+TGG | - | chr7.1:35609107-35609126 | None:intergenic | 25.0% |
!!! | ATTTTTTGTGTGTATGTACA+TGG | + | chr7.1:35609834-35609853 | MS.gene94756:intron | 25.0% |
!!! | CAATGGATTTGTTAAAGATA+CGG | + | chr7.1:35608007-35608026 | MS.gene94756:intron | 25.0% |
AGAAGATGGTAGTAAATTAG+TGG | - | chr7.1:35609441-35609460 | None:intergenic | 30.0% | |
AGCTAATGTGGAATATATAG+AGG | + | chr7.1:35609620-35609639 | MS.gene94756:intron | 30.0% | |
AGTTACATTGAAAGTTATGG+TGG | + | chr7.1:35607590-35607609 | MS.gene94756:CDS | 30.0% | |
ATCTTGATGGGAAATATCTA+TGG | + | chr7.1:35607784-35607803 | MS.gene94756:CDS | 30.0% | |
ATGCCTAATGATCTAGTAAA+AGG | + | chr7.1:35608062-35608081 | MS.gene94756:intron | 30.0% | |
ATTTCTTAATCATTGCCCTT+AGG | - | chr7.1:35609161-35609180 | None:intergenic | 30.0% | |
CGAAGTTACATTGAAAGTTA+TGG | + | chr7.1:35607587-35607606 | MS.gene94756:CDS | 30.0% | |
TCAACTAGAAACATTCTGTT+TGG | + | chr7.1:35608448-35608467 | MS.gene94756:CDS | 30.0% | |
TGTTGTTAATATTGGAGTGA+AGG | + | chr7.1:35608903-35608922 | MS.gene94756:CDS | 30.0% | |
TTCACATCTAGAAAGAATGA+AGG | + | chr7.1:35608855-35608874 | MS.gene94756:CDS | 30.0% | |
TTCCAATAACAATCTTGGAT+TGG | - | chr7.1:35608372-35608391 | None:intergenic | 30.0% | |
TTCCAATCCAAGATTGTTAT+TGG | + | chr7.1:35608367-35608386 | MS.gene94756:CDS | 30.0% | |
TTTCTTAATCATTGCCCTTA+GGG | - | chr7.1:35609160-35609179 | None:intergenic | 30.0% | |
! | AACTTCCTCAATGTCATTTA+GGG | - | chr7.1:35608884-35608903 | None:intergenic | 30.0% |
! | ACAATCTTGGATTGGAATAT+TGG | - | chr7.1:35608364-35608383 | None:intergenic | 30.0% |
! | AGACCTTTTACTAGATCATT+AGG | - | chr7.1:35608068-35608087 | None:intergenic | 30.0% |
! | ATAATTTGTATCTATGGCGA+TGG | + | chr7.1:35608989-35609008 | MS.gene94756:intron | 30.0% |
! | ATCCAAGATTGTTATTGGAA+AGG | + | chr7.1:35608372-35608391 | MS.gene94756:CDS | 30.0% |
! | GAGGAAGTTGTTGTTAATAT+TGG | + | chr7.1:35608895-35608914 | MS.gene94756:CDS | 30.0% |
! | TCCAAGATTGTTATTGGAAA+GGG | + | chr7.1:35608373-35608392 | MS.gene94756:CDS | 30.0% |
! | TTTAAGATAAAGTCTGTCAG+AGG | - | chr7.1:35608292-35608311 | None:intergenic | 30.0% |
!!! | CTGTTTTGATTGGTAAAATC+TGG | - | chr7.1:35608690-35608709 | None:intergenic | 30.0% |
!!! | TGATCTTTTTTCCTTAATCC+TGG | + | chr7.1:35609757-35609776 | MS.gene94756:intron | 30.0% |
AAACAAAGTTCTGTATGCTG+AGG | + | chr7.1:35607623-35607642 | MS.gene94756:CDS | 35.0% | |
AAACCAACATATGCAGATGA+GGG | + | chr7.1:35608316-35608335 | MS.gene94756:CDS | 35.0% | |
AAATCCATTGTCAAAGGAAC+TGG | - | chr7.1:35607997-35608016 | None:intergenic | 35.0% | |
AACACTACTTATCAGCAAGA+AGG | + | chr7.1:35608139-35608158 | MS.gene94756:intron | 35.0% | |
AATCCATTGTCAAAGGAACT+GGG | - | chr7.1:35607996-35608015 | None:intergenic | 35.0% | |
ACACTTTAACCAATGCCTTA+AGG | + | chr7.1:35609273-35609292 | MS.gene94756:intron | 35.0% | |
AGCTTCTTAACATTGCCTTT+AGG | + | chr7.1:35607675-35607694 | MS.gene94756:CDS | 35.0% | |
AGTACTTTACTTGTGATGAC+TGG | + | chr7.1:35607901-35607920 | MS.gene94756:CDS | 35.0% | |
ATTAAGCTTCAGGAAACCTA+TGG | + | chr7.1:35609948-35609967 | MS.gene94756:CDS | 35.0% | |
CACTTTAACCAATGCCTTAA+GGG | + | chr7.1:35609274-35609293 | MS.gene94756:intron | 35.0% | |
CTAATGCATGCTTTAACAGA+TGG | + | chr7.1:35609889-35609908 | MS.gene94756:intron | 35.0% | |
GCTTCTTAACATTGCCTTTA+GGG | + | chr7.1:35607676-35607695 | MS.gene94756:CDS | 35.0% | |
GGTAGTAAATTAGTGGTTGA+TGG | - | chr7.1:35609434-35609453 | None:intergenic | 35.0% | |
GTTCTTACTTCCAAAGAAGA+TGG | + | chr7.1:35608712-35608731 | MS.gene94756:CDS | 35.0% | |
TCAACATCTGCTTTGACTAA+GGG | + | chr7.1:35609047-35609066 | MS.gene94756:CDS | 35.0% | |
TGGGAAATATCTATGGTCAA+AGG | + | chr7.1:35607791-35607810 | MS.gene94756:CDS | 35.0% | |
TGGTTATATTCAGTTTCCCT+TGG | - | chr7.1:35609414-35609433 | None:intergenic | 35.0% | |
TGGTTCCTTACTTCATATGT+AGG | - | chr7.1:35608670-35608689 | None:intergenic | 35.0% | |
TGTACATGGTATGAGTATAC+CGG | + | chr7.1:35609848-35609867 | MS.gene94756:intron | 35.0% | |
TGTTAATATTGGAGTGAAGG+AGG | + | chr7.1:35608906-35608925 | MS.gene94756:CDS | 35.0% | |
TTAACAAGAAACAAGTCACC+AGG | - | chr7.1:35609778-35609797 | None:intergenic | 35.0% | |
! | ACTTCCTCAATGTCATTTAG+GGG | - | chr7.1:35608883-35608902 | None:intergenic | 35.0% |
! | ATGTAGGAAAAATTTGAGGC+TGG | - | chr7.1:35608654-35608673 | None:intergenic | 35.0% |
! | CAACTTCCTCAATGTCATTT+AGG | - | chr7.1:35608885-35608904 | None:intergenic | 35.0% |
! | TATAGCAGAGGAAGATTTTG+CGG | + | chr7.1:35608471-35608490 | MS.gene94756:CDS | 35.0% |
!! | AGTTTTCTCACTTTTCCTCT+AGG | + | chr7.1:35608505-35608524 | MS.gene94756:CDS | 35.0% |
!!! | GTAAGAACAGCTGTTTTGAT+TGG | - | chr7.1:35608700-35608719 | None:intergenic | 35.0% |
!!! | GTGTGAGTCTTTTTTGGTAT+CGG | + | chr7.1:35607928-35607947 | MS.gene94756:intron | 35.0% |
!!! | TTTCTTCTTTTGGCTTCTTC+AGG | - | chr7.1:35609927-35609946 | None:intergenic | 35.0% |
AAAGCGTGCAAGATCTTGAT+GGG | + | chr7.1:35607772-35607791 | MS.gene94756:CDS | 40.0% | |
AAGAAATGCTACTCAAGCCA+AGG | + | chr7.1:35607820-35607839 | MS.gene94756:CDS | 40.0% | |
AAGAGAGAAAGTCAAGAAGG+AGG | + | chr7.1:35609729-35609748 | MS.gene94756:intron | 40.0% | |
AATGCTAATGAGTGCCCTTA+AGG | - | chr7.1:35609291-35609310 | None:intergenic | 40.0% | |
ACACCATCAAACGATGACAT+TGG | - | chr7.1:35608835-35608854 | None:intergenic | 40.0% | |
ACTACTTATCAGCAAGAAGG+AGG | + | chr7.1:35608142-35608161 | MS.gene94756:intron | 40.0% | |
ACTCCAATGTCATCGTTTGA+TGG | + | chr7.1:35608829-35608848 | MS.gene94756:CDS | 40.0% | |
AGTCTTGCAATAGTCCCTAA+AGG | - | chr7.1:35607693-35607712 | None:intergenic | 40.0% | |
ATTGGAGTGAAGGAGGTAAA+GGG | + | chr7.1:35608913-35608932 | MS.gene94756:intron | 40.0% | |
CATTCTGTTTGGTATAGCAG+AGG | + | chr7.1:35608459-35608478 | MS.gene94756:CDS | 40.0% | |
CCAAACTACCTACTACTACT+TGG | - | chr7.1:35609383-35609402 | None:intergenic | 40.0% | |
CCAAGTAGTAGTAGGTAGTT+TGG | + | chr7.1:35609380-35609399 | MS.gene94756:intron | 40.0% | |
CTAAGTTTACTGCAGACGAA+TGG | + | chr7.1:35608086-35608105 | MS.gene94756:intron | 40.0% | |
CTCAACATCTGCTTTGACTA+AGG | + | chr7.1:35609046-35609065 | MS.gene94756:CDS | 40.0% | |
CTTAGTCAAAGCAGATGTTG+AGG | - | chr7.1:35609048-35609067 | None:intergenic | 40.0% | |
GAAACAAGTCACCAGGATTA+AGG | - | chr7.1:35609771-35609790 | None:intergenic | 40.0% | |
GAAACCAACATATGCAGATG+AGG | + | chr7.1:35608315-35608334 | MS.gene94756:CDS | 40.0% | |
GATCACAAATTAGACAGAGC+CGG | - | chr7.1:35609870-35609889 | None:intergenic | 40.0% | |
GCAGATGCTGATAAAACTAC+TGG | + | chr7.1:35608417-35608436 | MS.gene94756:CDS | 40.0% | |
GCCCTTTCCAATAACAATCT+TGG | - | chr7.1:35608377-35608396 | None:intergenic | 40.0% | |
TACTTCCAAAGAAGATGGTG+AGG | + | chr7.1:35608717-35608736 | MS.gene94756:CDS | 40.0% | |
TAGTTTGGTCTAGTAGCCAA+GGG | + | chr7.1:35609395-35609414 | MS.gene94756:intron | 40.0% | |
TATTGGAGTGAAGGAGGTAA+AGG | + | chr7.1:35608912-35608931 | MS.gene94756:intron | 40.0% | |
TCTGTCACCATAATCGTTGT+TGG | - | chr7.1:35608796-35608815 | None:intergenic | 40.0% | |
! | CTTCCTCAATGTCATTTAGG+GGG | - | chr7.1:35608882-35608901 | None:intergenic | 40.0% |
!! | TCACAAGTAAAGTACTGCAC+CGG | - | chr7.1:35607897-35607916 | None:intergenic | 40.0% |
!! | TCTCACCTAAGAAGTGTTTG+AGG | - | chr7.1:35609073-35609092 | None:intergenic | 40.0% |
!! | TGAGTCCAGAGAAGTGTTTA+CGG | + | chr7.1:35608602-35608621 | MS.gene94756:CDS | 40.0% |
!! | TTTCTCACTTTTCCTCTAGG+AGG | + | chr7.1:35608508-35608527 | MS.gene94756:CDS | 40.0% |
!!! | GGAAGTGTGTGAGTCTTTTT+TGG | + | chr7.1:35607922-35607941 | MS.gene94756:intron | 40.0% |
AAAGGGCTTACCATCTGAAG+AGG | + | chr7.1:35608390-35608409 | MS.gene94756:CDS | 45.0% | |
AAAGTTCTGTATGCTGAGGC+TGG | + | chr7.1:35607627-35607646 | MS.gene94756:CDS | 45.0% | |
AAGCCCTCATCTGCATATGT+TGG | - | chr7.1:35608322-35608341 | None:intergenic | 45.0% | |
AAGGGCCTCAAACACTTCTT+AGG | + | chr7.1:35609065-35609084 | MS.gene94756:CDS | 45.0% | |
AAGGGCTTACCATCTGAAGA+GGG | + | chr7.1:35608391-35608410 | MS.gene94756:CDS | 45.0% | |
AAGTTCTGTATGCTGAGGCT+GGG | + | chr7.1:35607628-35607647 | MS.gene94756:CDS | 45.0% | |
AATGAGTGCCCTTAAGGCAT+TGG | - | chr7.1:35609285-35609304 | None:intergenic | 45.0% | |
ACTCCTGTCCAAGTAGTAGT+AGG | + | chr7.1:35609372-35609391 | MS.gene94756:intron | 45.0% | |
ACTGAACATCGATGACACAC+CGG | + | chr7.1:35607875-35607894 | MS.gene94756:CDS | 45.0% | |
AGGGACTATTGCAAGACTAG+TGG | + | chr7.1:35607695-35607714 | MS.gene94756:CDS | 45.0% | |
ATCGGAAATGCCTTTGTGGA+AGG | + | chr7.1:35607946-35607965 | MS.gene94756:intron | 45.0% | |
ATCTGCTTACCCTCTTCAGA+TGG | - | chr7.1:35608403-35608422 | None:intergenic | 45.0% | |
ATTGTCAAAGGAACTGGGAC+AGG | - | chr7.1:35607991-35608010 | None:intergenic | 45.0% | |
ATTTGCAACACTCCTCCTAG+AGG | - | chr7.1:35608523-35608542 | None:intergenic | 45.0% | |
CAAAGCGTGCAAGATCTTGA+TGG | + | chr7.1:35607771-35607790 | MS.gene94756:CDS | 45.0% | |
CAAGACCTCACCATCTTCTT+TGG | - | chr7.1:35608725-35608744 | None:intergenic | 45.0% | |
CACCATAATCGTTGTTGGTC+CGG | - | chr7.1:35608791-35608810 | None:intergenic | 45.0% | |
CCTCCAGAAACAGAGGATTT+GGG | - | chr7.1:35608760-35608779 | None:intergenic | 45.0% | |
CTACCTACTACTACTTGGAC+AGG | - | chr7.1:35609378-35609397 | None:intergenic | 45.0% | |
CTTCTGACAACTACCTTCCA+TGG | - | chr7.1:35607850-35607869 | None:intergenic | 45.0% | |
GACATATCCTCCAGAAACAG+AGG | - | chr7.1:35608767-35608786 | None:intergenic | 45.0% | |
GATCCCAAATCCTCTGTTTC+TGG | + | chr7.1:35608754-35608773 | MS.gene94756:CDS | 45.0% | |
GATTATGGTGACAGACGACT+TGG | + | chr7.1:35608801-35608820 | MS.gene94756:CDS | 45.0% | |
GGGAAGAGAGAAAGTCAAGA+AGG | + | chr7.1:35609726-35609745 | MS.gene94756:intron | 45.0% | |
GTAGTTTGGTCTAGTAGCCA+AGG | + | chr7.1:35609394-35609413 | MS.gene94756:intron | 45.0% | |
TCCTCCAGAAACAGAGGATT+TGG | - | chr7.1:35608761-35608780 | None:intergenic | 45.0% | |
TCTGACCGTAAACACTTCTC+TGG | - | chr7.1:35608610-35608629 | None:intergenic | 45.0% | |
TGCCACAATACCTTCCACAA+AGG | - | chr7.1:35607959-35607978 | None:intergenic | 45.0% | |
TGTCCCAGTTCCTTTGACAA+TGG | + | chr7.1:35607990-35608009 | MS.gene94756:intron | 45.0% | |
! | ATTGGCTTACCCTCTTCAGA+TGG | - | chr7.1:35608346-35608365 | None:intergenic | 45.0% |
! | CTTGCTGACTAGTACCCTAA+GGG | + | chr7.1:35609143-35609162 | MS.gene94756:intron | 45.0% |
! | GTTTCTGGAGGATATGTCAC+CGG | + | chr7.1:35608769-35608788 | MS.gene94756:CDS | 45.0% |
! | TCTTGCTGACTAGTACCCTA+AGG | + | chr7.1:35609142-35609161 | MS.gene94756:intron | 45.0% |
! | TGGTATCGGAAATGCCTTTG+TGG | + | chr7.1:35607942-35607961 | MS.gene94756:intron | 45.0% |
!! | GCTTCTTCAGGTTGCTTACT+GGG | - | chr7.1:35609915-35609934 | None:intergenic | 45.0% |
!! | GGAGTGTTGCAAATGCTAGA+AGG | + | chr7.1:35608529-35608548 | MS.gene94756:CDS | 45.0% |
!! | TGCCTTTGTGGAAGGTATTG+TGG | + | chr7.1:35607954-35607973 | MS.gene94756:intron | 45.0% |
AAGCCAAGGAACTCCATGGA+AGG | + | chr7.1:35607834-35607853 | MS.gene94756:CDS | 50.0% | |
ACTCAAGCCAAGGAACTCCA+TGG | + | chr7.1:35607830-35607849 | MS.gene94756:CDS | 50.0% | |
CACCGGACCAACAACGATTA+TGG | + | chr7.1:35608786-35608805 | MS.gene94756:CDS | 50.0% | |
CTACCTTCCATGGAGTTCCT+TGG | - | chr7.1:35607840-35607859 | None:intergenic | 50.0% | |
GAGGGCTTACCATCTGAAGA+GGG | + | chr7.1:35608334-35608353 | MS.gene94756:CDS | 50.0% | |
GGTCCCCCTAAATGACATTG+AGG | + | chr7.1:35608876-35608895 | MS.gene94756:CDS | 50.0% | |
GTATCTATGGCGATGGTGCA+GGG | + | chr7.1:35608996-35609015 | MS.gene94756:intron | 50.0% | |
TGAGGGCTTACCATCTGAAG+AGG | + | chr7.1:35608333-35608352 | MS.gene94756:CDS | 50.0% | |
TGTATCTATGGCGATGGTGC+AGG | + | chr7.1:35608995-35609014 | MS.gene94756:intron | 50.0% | |
!! | CCCAAATCCTCTGTTTCTGG+AGG | + | chr7.1:35608757-35608776 | MS.gene94756:CDS | 50.0% |
!! | GGCTTCTTCAGGTTGCTTAC+TGG | - | chr7.1:35609916-35609935 | None:intergenic | 50.0% |
!! | TGTGGAAGGTATTGTGGCAG+TGG | + | chr7.1:35607960-35607979 | MS.gene94756:intron | 50.0% |
CAGAGGAGTCTTCGAGAGCA+AGG | - | chr7.1:35608275-35608294 | None:intergenic | 55.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr7.1 | gene | 35607579 | 35609975 | 35607579 | ID=MS.gene94756 |
chr7.1 | mRNA | 35607579 | 35609975 | 35607579 | ID=MS.gene94756.t1;Parent=MS.gene94756 |
chr7.1 | exon | 35607579 | 35607929 | 35607579 | ID=MS.gene94756.t1.exon1;Parent=MS.gene94756.t1 |
chr7.1 | CDS | 35607579 | 35607929 | 35607579 | ID=cds.MS.gene94756.t1;Parent=MS.gene94756.t1 |
chr7.1 | exon | 35608250 | 35608927 | 35608250 | ID=MS.gene94756.t1.exon2;Parent=MS.gene94756.t1 |
chr7.1 | CDS | 35608250 | 35608927 | 35608250 | ID=cds.MS.gene94756.t1;Parent=MS.gene94756.t1 |
chr7.1 | exon | 35609017 | 35609086 | 35609017 | ID=MS.gene94756.t1.exon3;Parent=MS.gene94756.t1 |
chr7.1 | CDS | 35609017 | 35609086 | 35609017 | ID=cds.MS.gene94756.t1;Parent=MS.gene94756.t1 |
chr7.1 | exon | 35609908 | 35609975 | 35609908 | ID=MS.gene94756.t1.exon4;Parent=MS.gene94756.t1 |
chr7.1 | CDS | 35609908 | 35609975 | 35609908 | ID=cds.MS.gene94756.t1;Parent=MS.gene94756.t1 |
Gene Sequence |
Protein sequence |