AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene037588

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene037588.t1 MTR_4g017830 89.493 533 52 2 1 531 1 531 0.0 960
MS.gene037588.t1 MTR_4g019340 73.931 491 94 6 11 491 37 503 0.0 702
MS.gene037588.t1 MTR_4g017440 67.589 506 153 5 7 507 9 508 0.0 660
MS.gene037588.t1 MTR_4g017410 64.368 522 145 9 1 510 1 493 0.0 633
MS.gene037588.t1 MTR_4g017470 62.548 518 147 6 1 510 1 479 0.0 608
MS.gene037588.t1 MTR_4g017550 66.239 468 141 9 39 501 18 473 0.0 583
MS.gene037588.t1 MTR_4g017550 30.469 256 129 11 6 240 242 469 1.19e-13 73.6
MS.gene037588.t1 MTR_4g017610 57.831 498 186 6 1 497 1 475 0.0 545
MS.gene037588.t1 MTR_4g019310 41.683 523 263 17 1 507 1 497 1.99e-115 351
MS.gene037588.t1 MTR_7g066340 35.227 528 262 16 1 512 1 464 2.76e-81 261
MS.gene037588.t1 MTR_7g066260 34.709 533 268 16 4 517 7 478 3.50e-80 259
MS.gene037588.t1 MTR_7g066570 35.755 523 263 18 1 497 1 476 7.03e-77 253
MS.gene037588.t1 MTR_7g066350 33.735 498 255 13 13 497 10 445 4.31e-73 239
MS.gene037588.t1 MTR_7g066350 27.969 261 138 10 269 510 9 238 1.28e-14 76.6
MS.gene037588.t1 MTR_7g066430 36.078 510 280 15 13 503 5 487 7.61e-72 238
MS.gene037588.t1 MTR_7g066430 26.122 245 155 5 7 240 252 481 2.67e-11 66.2
MS.gene037588.t1 MTR_7g058710 31.629 528 295 12 1 507 1 483 3.68e-71 235
MS.gene037588.t1 MTR_7g066410 35.687 524 280 17 13 501 11 512 1.40e-70 234
MS.gene037588.t1 MTR_7g066400 33.728 507 252 16 1 497 1 433 6.29e-66 221
MS.gene037588.t1 MTR_7g012680 33.141 519 259 16 4 507 6 451 1.57e-65 219
MS.gene037588.t1 MTR_7g066360 34.694 539 272 18 2 527 4 475 1.46e-64 218
MS.gene037588.t1 MTR_1g041315 32.016 506 262 14 3 485 5 451 4.04e-62 212
MS.gene037588.t1 MTR_7g063900 33.333 516 295 18 1 501 1 482 5.57e-61 209
MS.gene037588.t1 MTR_7g062300 32.239 518 287 17 1 500 1 472 5.37e-60 206
MS.gene037588.t1 MTR_7g062280 32.210 534 292 19 1 507 1 491 9.64e-60 205
MS.gene037588.t1 MTR_7g063660 31.558 507 296 15 13 507 10 477 2.31e-58 201
MS.gene037588.t1 MTR_7g066580 31.048 496 267 17 18 497 1 437 4.21e-57 197
MS.gene037588.t1 MTR_7g063880 32.115 520 288 20 1 507 1 468 6.59e-57 197
MS.gene037588.t1 MTR_7g063840 30.545 514 299 16 7 507 5 473 6.93e-56 194
MS.gene037588.t1 MTR_7g066290 31.774 513 249 17 3 500 6 432 2.29e-54 189
MS.gene037588.t1 MTR_4g019240 74.797 123 28 2 1 122 1 121 4.41e-53 178
MS.gene037588.t1 MTR_4g019240 78.261 69 15 0 459 527 112 180 9.00e-26 104
MS.gene037588.t1 MTR_7g063820 30.962 520 310 15 1 507 1 484 1.34e-52 186
MS.gene037588.t1 MTR_7g066310 30.078 512 221 16 13 512 8 394 2.10e-52 183
MS.gene037588.t1 MTR_7g063890 30.962 520 310 16 4 508 20 505 2.40e-52 186
MS.gene037588.t1 MTR_7g063830 33.161 386 216 12 1 371 1 359 2.67e-48 173
MS.gene037588.t1 MTR_7g063920 28.963 511 284 14 1 507 1 436 3.93e-48 173
MS.gene037588.t1 MTR_2g029400 28.747 487 249 11 8 489 10 403 2.55e-44 162
MS.gene037588.t1 MTR_3g065200 28.367 490 266 16 13 495 4 415 1.98e-43 160
MS.gene037588.t1 MTR_7g063670 28.902 519 292 15 1 507 4 457 2.06e-42 157
MS.gene037588.t1 MTR_7g058700 32.869 359 160 12 24 352 531 838 2.76e-41 159
MS.gene037588.t1 MTR_7g066480 32.341 504 227 19 13 501 17 421 3.76e-41 154
MS.gene037588.t1 MTR_3g007740 29.240 513 280 17 1 501 1 442 1.14e-40 152
MS.gene037588.t1 MTR_7g066280 29.452 438 248 13 99 512 1 401 1.66e-40 151
MS.gene037588.t1 MTR_7g066280 27.308 260 149 9 5 240 143 386 8.05e-12 67.8
MS.gene037588.t1 MTR_7g066490 30.707 495 233 16 13 501 17 407 1.98e-38 145
MS.gene037588.t1 MTR_7g066680 30.794 315 163 7 221 497 37 334 9.86e-27 111
MS.gene037588.t1 MTR_7g100420 34.507 284 155 10 221 497 134 393 3.62e-25 108
MS.gene037588.t1 MTR_7g063720 30.645 248 136 7 268 512 22 236 4.30e-24 101
MS.gene037588.t1 MTR_1g014060 35.814 215 113 7 21 227 9 206 7.05e-24 103
MS.gene037588.t1 MTR_1g014060 33.491 212 107 6 299 507 210 390 2.10e-18 87.8
MS.gene037588.t1 MTR_8g445860 30.992 242 136 5 266 495 10 232 2.41e-23 99.4
MS.gene037588.t1 MTR_8g445860 30.924 249 146 7 1 242 7 236 2.23e-18 85.1
MS.gene037588.t1 MTR_1g115440 31.061 264 133 9 1 242 1 237 7.89e-22 95.1
MS.gene037588.t1 MTR_1g115440 30.932 236 141 6 269 495 11 233 2.56e-19 87.8
MS.gene037588.t1 MTR_4g019350 49.000 100 39 2 327 425 1 89 3.81e-21 88.6
MS.gene037588.t1 MTR_8g023240 23.529 510 301 17 6 489 31 477 1.60e-20 95.5
MS.gene037588.t1 MTR_0150s0010 31.120 241 134 7 269 495 10 232 6.10e-20 89.4
MS.gene037588.t1 MTR_0150s0010 29.644 253 150 7 1 242 1 236 3.02e-17 81.6
MS.gene037588.t1 MTR_7g062270 35.122 205 106 7 1 197 1 186 7.36e-20 92.0
MS.gene037588.t1 MTR_7g062270 30.890 191 103 7 273 456 14 182 2.82e-13 72.0
MS.gene037588.t1 MTR_7g063850 27.778 252 148 7 265 507 62 288 2.51e-19 89.0
MS.gene037588.t1 MTR_1g115450 45.122 82 43 1 266 345 4 85 1.03e-14 71.6
MS.gene037588.t1 MTR_1g115450 34.921 126 64 3 1 126 1 108 3.40e-12 64.7
MS.gene037588.t1 MTR_6g006800 66.667 45 15 0 3 47 2 46 2.84e-13 65.5
MS.gene037588.t1 MTR_1g115455 26.891 238 150 7 266 495 6 227 4.21e-13 69.3
MS.gene037588.t1 MTR_1g115455 35.556 135 65 5 1 130 1 118 5.48e-13 68.9
MS.gene037588.t1 MTR_0150s0030 36.538 104 57 2 266 366 5 102 4.89e-13 68.6
MS.gene037588.t1 MTR_0150s0030 35.714 98 51 1 13 110 9 94 5.63e-11 62.8
MS.gene037588.t1 MTR_8g445920 48.387 62 32 0 269 330 10 71 7.30e-13 65.5
MS.gene037588.t1 MTR_8g044890 48.387 62 32 0 269 330 10 71 7.30e-13 65.5
MS.gene037588.t1 MTR_8g445910 37.500 104 56 2 266 366 5 102 8.95e-13 68.9
MS.gene037588.t1 MTR_4g019330 43.529 85 46 2 425 507 104 188 4.77e-12 65.5
MS.gene037588.t1 MTR_8g044880 40.964 83 46 1 266 345 5 87 8.55e-12 66.2
MS.gene037588.t1 MTR_1g115470 42.683 82 45 1 266 345 3 84 1.42e-11 67.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene037588.t1 AT5G01120 32.335 501 306 11 9 497 6 485 4.89e-68 228
MS.gene037588.t1 AT5G43240 33.208 530 302 16 13 517 10 512 1.19e-64 219
MS.gene037588.t1 AT5G43240 33.208 530 302 16 13 517 10 512 1.19e-64 219
MS.gene037588.t1 AT5G43240 33.208 530 302 16 13 517 10 512 1.19e-64 219
MS.gene037588.t1 AT5G01130 33.595 509 265 19 9 507 6 451 1.26e-62 212
MS.gene037588.t1 AT3G09140 32.246 521 284 18 9 497 6 489 4.06e-59 204
MS.gene037588.t1 AT5G01150 32.008 528 289 15 9 510 6 489 2.30e-56 196
MS.gene037588.t1 AT5G01140 31.407 519 286 19 2 511 4 461 1.10e-54 191
MS.gene037588.t1 AT3G09140 30.601 549 284 19 9 497 6 517 4.36e-54 191
MS.gene037588.t1 AT3G09110 36.446 332 182 10 9 330 6 318 4.88e-48 170
MS.gene037588.t1 AT5G37320 30.174 517 295 19 7 499 3 477 4.92e-48 174
MS.gene037588.t1 AT3G09120 34.954 329 182 11 9 323 3 313 2.71e-45 162
MS.gene037588.t1 AT3G09120 29.915 234 147 8 269 495 6 229 5.86e-15 76.3
MS.gene037588.t1 AT5G43240 31.662 379 224 10 157 517 7 368 5.84e-37 140

Find 105 sgRNAs with CRISPR-Local

Find 427 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCACCCACTACTTGTTATTA+TGG 0.206586 4.3:-80947938 MS.gene037588:CDS
TTTGACTTGTTTGAGGATCT+TGG 0.230164 4.3:+80947782 None:intergenic
GTCAAATTTGATTCTTGTTT+TGG 0.240264 4.3:+80947184 None:intergenic
GTGGAACGGTTGATGGAATT+AGG 0.243562 4.3:-80952014 MS.gene037588:CDS
CTCTGACTGCTGATGCAAAT+TGG 0.265259 4.3:+80948272 None:intergenic
ACTTTCCTTGCAATACCATT+AGG 0.290827 4.3:-80948139 MS.gene037588:CDS
GGAATGTTGAGGAGCTGTTT+TGG 0.298372 4.3:+80947971 None:intergenic
AACAACATTTGTTTGTAAAC+AGG 0.300924 4.3:+80952320 None:intergenic
TAATAAACAGCCTAAGGATT+TGG 0.303916 4.3:-80952150 MS.gene037588:CDS
CAGGGGAATGAGGTTCAAAA+TGG 0.309879 4.3:-80952116 MS.gene037588:CDS
CTTTCCTTGCAATACCATTA+GGG 0.321931 4.3:-80948138 MS.gene037588:CDS
AGGCGTGATTTCTAAGAAAA+AGG 0.330083 4.3:-80947843 MS.gene037588:CDS
CCCTCACTCCAAACGATGTT+TGG 0.334877 4.3:-80952349 MS.gene037588:CDS
TTCAGATTTGAGTAAGTTAG+AGG 0.335387 4.3:-80951988 MS.gene037588:CDS
AGGGTCTGTTGTAAAGCTTT+TGG 0.341615 4.3:-80948119 MS.gene037588:CDS
AAAGCAACATTATATGCTAT+TGG 0.383153 4.3:-80947734 MS.gene037588:CDS
ACTGCTGATGCAAATTGGTT+TGG 0.395154 4.3:+80948277 None:intergenic
TAGTGTTCAGCGACTATAAT+GGG 0.412179 4.3:-80947898 MS.gene037588:CDS
GGATTTGGATTCTGAGGGTC+AGG 0.417104 4.3:-80952135 MS.gene037588:CDS
CATTGTGGTTTGTGGTTAAG+AGG 0.421138 4.3:+80952444 None:intergenic
CCTGGCCTATCACCACAGTT+TGG 0.428668 4.3:-80947998 MS.gene037588:CDS
GGGTTGTTCCAAACATCGTT+TGG 0.428963 4.3:+80952341 None:intergenic
ATCCTTAGGCTGTTTATTAG+TGG 0.429803 4.3:+80952154 None:intergenic
CTAGTGTTCAGCGACTATAA+TGG 0.430095 4.3:-80947899 MS.gene037588:CDS
TGGAACGGTTGATGGAATTA+GGG 0.433049 4.3:-80952013 MS.gene037588:CDS
CACTACTTGTTATTATGGTA+CGG 0.433352 4.3:-80947933 MS.gene037588:CDS
TCCAGTGCAGTCAAGGCTCT+TGG 0.433952 4.3:+80947806 None:intergenic
GACCTCCGTGGAACGGTTGA+TGG 0.436015 4.3:-80952021 MS.gene037588:CDS
TGTCATCAATATTCAAGAAC+AGG 0.438740 4.3:+80952261 None:intergenic
CAGAATCTTGATTGTACTTG+TGG 0.438965 4.3:-80952182 MS.gene037588:CDS
TCCTTAGGCTGTTTATTAGT+GGG 0.446992 4.3:+80952155 None:intergenic
GTAGTGGGTGGTTGTACATC+AGG 0.459977 4.3:+80947950 None:intergenic
ACTACTTGTTATTATGGTAC+GGG 0.460909 4.3:-80947932 MS.gene037588:CDS
CCAAACATCGTTTGGAGTGA+GGG 0.462496 4.3:+80952349 None:intergenic
CGCTCGGTGTTACTCAATCC+TGG 0.464266 4.3:-80948016 MS.gene037588:CDS
AGGGGAATGAGGTTCAAAAT+GGG 0.466903 4.3:-80952115 MS.gene037588:CDS
ATGCAAGAATTATCAGAAAG+TGG 0.472857 4.3:+80947692 None:intergenic
GCTGATGCAAATTGGTTTGG+TGG 0.474643 4.3:+80948280 None:intergenic
GAGAGGTTAAGATGTATTTG+AGG 0.479701 4.3:+80948356 None:intergenic
GACAACCAAACTGTGGTGAT+AGG 0.480793 4.3:+80947993 None:intergenic
TTGCATCAGCAGTCAGAGTA+AGG 0.490231 4.3:-80948267 MS.gene037588:CDS
ATAATTCAGGCATCTGCTAA+AGG 0.495100 4.3:+80947115 None:intergenic
AATCATAGAAGATAAGATAG+AGG 0.500673 4.3:-80947867 MS.gene037588:CDS
GTACAAGACTGTTGAGACCT+TGG 0.502138 4.3:-80948062 MS.gene037588:CDS
GCCTAAGGATTTGGATTCTG+AGG 0.505495 4.3:-80952141 MS.gene037588:CDS
TTTGTGATCATTGTGGTTTG+TGG 0.509577 4.3:+80952436 None:intergenic
TAGTCGCTGAACACTAGCTT+TGG 0.516019 4.3:+80947905 None:intergenic
TTCTGAGGGTCAGGGGAATG+AGG 0.516607 4.3:-80952126 MS.gene037588:CDS
CCTTCATTTCCAGATCATCA+AGG 0.519540 4.3:+80947642 None:intergenic
TTCAAAATTGTATTTGTCAG+AGG 0.520812 4.3:+80948328 None:intergenic
CCCTCAGAATCCAAATCCTT+AGG 0.521369 4.3:+80952140 None:intergenic
TGTGGTTAAGAGGCGAATGA+TGG 0.521801 4.3:+80952454 None:intergenic
GTTTGGAGTGAGGGTTTGTA+CGG 0.532495 4.3:+80952358 None:intergenic
CTTGTGCACGGACTCGCGCT+CGG 0.532741 4.3:-80948032 MS.gene037588:CDS
TGGTGGCAAGTGGAAGAGAA+AGG 0.533657 4.3:+80952474 None:intergenic
AGCTTTACAACAGACCCTAA+TGG 0.534906 4.3:+80948124 None:intergenic
ACCAAGAGCCTTGACTGCAC+TGG 0.536046 4.3:-80947807 MS.gene037588:CDS
TCTTGGATCCAGTGCAGTCA+AGG 0.536451 4.3:+80947799 None:intergenic
TCAAAATTTACACTGACTAG+TGG 0.539589 4.3:-80947229 MS.gene037588:CDS
ACCCACTAATAAACAGCCTA+AGG 0.539763 4.3:-80952156 MS.gene037588:CDS
ATTTGGATTCTGAGGGTCAG+GGG 0.552267 4.3:-80952133 MS.gene037588:CDS
CTTCATTTCCAGATCATCAA+GGG 0.555681 4.3:+80947643 None:intergenic
AGGTTAAGATGTATTTGAGG+AGG 0.555762 4.3:+80948359 None:intergenic
CTTGGACTCTTCCTTGTGCA+CGG 0.556068 4.3:-80948044 MS.gene037588:CDS
GAGGAAGTCACGCATAACAT+TGG 0.558134 4.3:-80951969 MS.gene037588:CDS
CAAAGTATATACAAACTAGC+AGG 0.558931 4.3:-80947159 MS.gene037588:CDS
CGAGCGCGAGTCCGTGCACA+AGG 0.559536 4.3:+80948033 None:intergenic
CCTTGATGATCTGGAAATGA+AGG 0.561579 4.3:-80947642 MS.gene037588:CDS
ACAACATTTGTTTGTAAACA+GGG 0.565486 4.3:+80952321 None:intergenic
CTTTGATGACCTCCGTGGAA+CGG 0.568765 4.3:-80952028 MS.gene037588:CDS
TCCAAACATCGTTTGGAGTG+AGG 0.570799 4.3:+80952348 None:intergenic
CAAGTCAAAAGAAGATGCTG+TGG 0.573281 4.3:-80947768 MS.gene037588:CDS
ATTCTTGTTTGTGATCATTG+TGG 0.574553 4.3:+80952429 None:intergenic
TGTGGTTGCGAAGAAGCCAT+TGG 0.574616 4.3:+80952602 None:intergenic
ATCATAGAAGATAAGATAGA+GGG 0.577570 4.3:-80947866 MS.gene037588:CDS
GATTTGGATTCTGAGGGTCA+GGG 0.578112 4.3:-80952134 MS.gene037588:CDS
CCAAACTGTGGTGATAGGCC+AGG 0.582098 4.3:+80947998 None:intergenic
TCAGAATCATCATCATTCCT+CGG 0.586673 4.3:-80952404 MS.gene037588:CDS
CCTAAGGATTTGGATTCTGA+GGG 0.593985 4.3:-80952140 MS.gene037588:CDS
GAGGAATGATGATGATTCTG+AGG 0.600974 4.3:+80952406 None:intergenic
TTGATGTAATGGAAGCTGCA+AGG 0.606907 4.3:+80947248 None:intergenic
AGGCGAATGATGGTGGCAAG+TGG 0.611394 4.3:+80952464 None:intergenic
CGTGCACAAGGAAGAGTCCA+AGG 0.613164 4.3:+80948045 None:intergenic
CGTACCATAATAACAAGTAG+TGG 0.614909 4.3:+80947934 None:intergenic
CTACTTGTTATTATGGTACG+GGG 0.616202 4.3:-80947931 MS.gene037588:CDS
GAAATGAAGGTGATAAGCAT+TGG 0.620399 4.3:-80947629 MS.gene037588:CDS
AAGTCAAAAGAAGATGCTGT+GGG 0.623804 4.3:-80947767 MS.gene037588:CDS
TAATTCCATCAACCGTTCCA+CGG 0.636089 4.3:+80952016 None:intergenic
TTGTTCTTTGATGACCTCCG+TGG 0.636160 4.3:-80952033 MS.gene037588:CDS
TTCATTTCCAGATCATCAAG+GGG 0.637868 4.3:+80947644 None:intergenic
GATAAGCATTGGTGAAGCTG+AGG 0.638424 4.3:-80947618 MS.gene037588:intron
GTACCATAATAACAAGTAGT+GGG 0.648516 4.3:+80947935 None:intergenic
GCATAACATTGGAAAGCAAG+AGG 0.649188 4.3:-80951958 MS.gene037588:intron
ATAGAAGATAAGATAGAGGG+AGG 0.659713 4.3:-80947863 MS.gene037588:CDS
GGGGAATGAGGTTCAAAATG+GGG 0.661152 4.3:-80952114 MS.gene037588:CDS
ACGGAGGTCATCAAAGAACA+AGG 0.673460 4.3:+80952035 None:intergenic
ATTTGTCAGAGGCTCATGAG+AGG 0.675408 4.3:+80948339 None:intergenic
CCATAATAACAAGTAGTGGG+TGG 0.678221 4.3:+80947938 None:intergenic
CAGACCCTAATGGTATTGCA+AGG 0.678878 4.3:+80948134 None:intergenic
TTCATGCACAGTGATTCACA+TGG 0.689658 4.3:+80952284 None:intergenic
GTTGTACATCAGGAATGTTG+AGG 0.692196 4.3:+80947960 None:intergenic
GGTTAAGAGGCGAATGATGG+TGG 0.700313 4.3:+80952457 None:intergenic
TTCCATCAACCGTTCCACGG+AGG 0.726289 4.3:+80952019 None:intergenic
ATGTAATGGAAGCTGCAAGG+AGG 0.730424 4.3:+80947251 None:intergenic
TCATTTCCAGATCATCAAGG+GGG 0.747642 4.3:+80947645 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATACAAAATACATATATAT+CGG - chr4.3:80948397-80948416 MS.gene037588:intron 10.0%
!! ATAATAATTTACAAAAATTG+TGG + chr4.3:80948570-80948589 None:intergenic 10.0%
!!! ATATTTTAAATAGGTTATAT+TGG - chr4.3:80951261-80951280 MS.gene037588:intron 10.0%
!! ATACAAAATACATATATATC+GGG - chr4.3:80948398-80948417 MS.gene037588:intron 15.0%
!! TCAACAATTAATGATATATA+TGG + chr4.3:80948978-80948997 None:intergenic 15.0%
!! TTAAAAAACATTCACAATTT+GGG - chr4.3:80950801-80950820 MS.gene037588:intron 15.0%
!! TTTAAAAAACATTCACAATT+TGG - chr4.3:80950800-80950819 MS.gene037588:intron 15.0%
!!! AAACTGTCATAATTTTTTTT+TGG - chr4.3:80948593-80948612 MS.gene037588:intron 15.0%
!!! TAGTGAAAGATATTTTAAAT+AGG - chr4.3:80951252-80951271 MS.gene037588:intron 15.0%
!! AAATATCTTTCAATGAACAT+AGG + chr4.3:80948638-80948657 None:intergenic 20.0%
!! AAATTGGTAGAAAAAATAGA+GGG - chr4.3:80949945-80949964 MS.gene037588:intron 20.0%
!! AACTATACTAAGAATTGTAA+TGG + chr4.3:80948509-80948528 None:intergenic 20.0%
!! AAGTTAGTAAATGAGTTAAA+AGG - chr4.3:80951073-80951092 MS.gene037588:intron 20.0%
!! AGGGTATATTTAAAAAAAAG+GGG - chr4.3:80949039-80949058 MS.gene037588:intron 20.0%
!! ATCAATTGTTCAATAAAAGA+TGG - chr4.3:80948474-80948493 MS.gene037588:intron 20.0%
!! TAAAAAAACACAGATTTGTA+AGG + chr4.3:80949319-80949338 None:intergenic 20.0%
!! TGAGAGAAAAAATAGAAATT+AGG - chr4.3:80949515-80949534 MS.gene037588:intron 20.0%
!!! AGATGATAATTTTTACTGAT+TGG - chr4.3:80950657-80950676 MS.gene037588:intron 20.0%
!!! AGTGTATTTTGTTTTGTTTT+TGG - chr4.3:80947822-80947841 MS.gene037588:CDS 20.0%
!!! ATGTTACTTACAAGTTATAT+TGG - chr4.3:80950917-80950936 MS.gene037588:intron 20.0%
!!! ATTGGTTTAATTTGTATGAT+TGG + chr4.3:80947993-80948012 None:intergenic 20.0%
!!! ATTGTGTGTTTTACTTTTAT+AGG + chr4.3:80948326-80948345 None:intergenic 20.0%
!!! GAGGGTATATTTAAAAAAAA+GGG - chr4.3:80949038-80949057 MS.gene037588:intron 20.0%
!!! GGAAAAAGAAGAATTTTATT+AGG + chr4.3:80950560-80950579 None:intergenic 20.0%
!!! TGAGCATAATGATATTTTTT+TGG + chr4.3:80948721-80948740 None:intergenic 20.0%
!!! TTTAGAATTGTGTTGTTAAT+TGG - chr4.3:80949762-80949781 MS.gene037588:intron 20.0%
!!! TTTTTTTTAAATATACCCTC+CGG + chr4.3:80949038-80949057 None:intergenic 20.0%
! AAAAGAAAGTGATAAACTCT+AGG + chr4.3:80950507-80950526 None:intergenic 25.0%
! AAAGAATAGAAAGGAAAGTA+AGG - chr4.3:80950367-80950386 MS.gene037588:intron 25.0%
! AAAGCAACATTATATGCTAT+TGG - chr4.3:80951985-80952004 MS.gene037588:CDS 25.0%
! AACAAAATAGAGAAAAACAG+AGG - chr4.3:80950025-80950044 MS.gene037588:intron 25.0%
! AACAACATTTGTTTGTAAAC+AGG + chr4.3:80947402-80947421 None:intergenic 25.0%
! AACTTGTAAGTAACATTCAA+AGG + chr4.3:80950913-80950932 None:intergenic 25.0%
! AATCATAGAAGATAAGATAG+AGG - chr4.3:80951852-80951871 MS.gene037588:intron 25.0%
! AATGATTCATAATTACCCAA+AGG + chr4.3:80949440-80949459 None:intergenic 25.0%
! ACAACATTTGTTTGTAAACA+GGG + chr4.3:80947401-80947420 None:intergenic 25.0%
! ACGTTTACCCTTTAAATTTA+TGG + chr4.3:80950778-80950797 None:intergenic 25.0%
! AGCATAAAAAGAGGTAATAA+AGG - chr4.3:80949983-80950002 MS.gene037588:intron 25.0%
! ATCATAGAAGATAAGATAGA+GGG - chr4.3:80951853-80951872 MS.gene037588:intron 25.0%
! ATGAAGGAGAAATTTCTATT+TGG + chr4.3:80950699-80950718 None:intergenic 25.0%
! ATGCAAGATATTAAACCAAA+CGG + chr4.3:80951208-80951227 None:intergenic 25.0%
! ATTGCAATTTAAGAGAGAAA+GGG - chr4.3:80948787-80948806 MS.gene037588:intron 25.0%
! CATTTGCTTATAATAGTGAT+CGG + chr4.3:80948904-80948923 None:intergenic 25.0%
! GAAATTGGTAGAAAAAATAG+AGG - chr4.3:80949944-80949963 MS.gene037588:intron 25.0%
! GGGTATATTTAAAAAAAAGG+GGG - chr4.3:80949040-80949059 MS.gene037588:intron 25.0%
! GGTATATTTAAAAAAAAGGG+GGG - chr4.3:80949041-80949060 MS.gene037588:intron 25.0%
! GTATATTTAAAAAAAAGGGG+GGG - chr4.3:80949042-80949061 MS.gene037588:intron 25.0%
! TAAGCAAAAGTTTACACTTT+AGG + chr4.3:80949006-80949025 None:intergenic 25.0%
! TATATTTAAAAAAAAGGGGG+GGG - chr4.3:80949043-80949062 MS.gene037588:intron 25.0%
! TGGGTAATTATGAATCATTA+GGG - chr4.3:80949441-80949460 MS.gene037588:intron 25.0%
! TGGTGTACCATAAATTTAAA+GGG - chr4.3:80950768-80950787 MS.gene037588:intron 25.0%
! TTCAAAATTGTATTTGTCAG+AGG + chr4.3:80951394-80951413 None:intergenic 25.0%
! TTGGGTAATTATGAATCATT+AGG - chr4.3:80949440-80949459 MS.gene037588:intron 25.0%
!! AGTTGTTGATTACAATTTGT+TGG + chr4.3:80948172-80948191 None:intergenic 25.0%
!! ATATATATGGTCTTTGTTGT+AGG + chr4.3:80948965-80948984 None:intergenic 25.0%
!! CTTGTAACTTTTATACATTC+AGG - chr4.3:80952339-80952358 MS.gene037588:CDS 25.0%
!! CTTTTGCTTATAATAATGAC+CGG - chr4.3:80949016-80949035 MS.gene037588:intron 25.0%
!! GGAGGGTATATTTAAAAAAA+AGG - chr4.3:80949037-80949056 MS.gene037588:intron 25.0%
!! GTATCAAAATGCTACTTAAA+CGG - chr4.3:80950243-80950262 MS.gene037588:intron 25.0%
!! TCTGTCTATTAAGATTTTGA+GGG + chr4.3:80947163-80947182 None:intergenic 25.0%
!! TTGTTATTGCATTAAAATGC+GGG - chr4.3:80949650-80949669 MS.gene037588:intron 25.0%
!! TTTTTCTCTATTTTGTTGCT+TGG + chr4.3:80950022-80950041 None:intergenic 25.0%
!!! ATCTGTGTTTTTTTAGCTTT+TGG - chr4.3:80949324-80949343 MS.gene037588:intron 25.0%
!!! CAGTGTAAATTTTGATGTAA+TGG + chr4.3:80952485-80952504 None:intergenic 25.0%
!!! CTTGTTATTGCATTAAAATG+CGG - chr4.3:80949649-80949668 MS.gene037588:intron 25.0%
!!! GTCAAATTTGATTCTTGTTT+TGG + chr4.3:80952538-80952557 None:intergenic 25.0%
!!! GTTTATAACGACCTTTTTTA+AGG - chr4.3:80948073-80948092 MS.gene037588:CDS 25.0%
!!! GTTTTTCTATTTTAGAGTAG+TGG - chr4.3:80949285-80949304 MS.gene037588:intron 25.0%
!!! TGATTACAATTTGTTGGAAA+CGG + chr4.3:80948166-80948185 None:intergenic 25.0%
!!! TTGTTTTGTTTTTGGAAACT+CGG - chr4.3:80947830-80947849 MS.gene037588:CDS 25.0%
!!! TTTTTTTTGGTGATTATCTC+AGG - chr4.3:80948606-80948625 MS.gene037588:intron 25.0%
AAAAAATAGAGGGAAAACAG+AGG - chr4.3:80949955-80949974 MS.gene037588:intron 30.0%
AAAAGTTACAAGAACATGCA+TGG + chr4.3:80952331-80952350 None:intergenic 30.0%
AAATGAAGTTACACCTAACT+CGG + chr4.3:80948211-80948230 None:intergenic 30.0%
AACCTCAAAGGGAATTAATT+GGG - chr4.3:80950628-80950647 MS.gene037588:intron 30.0%
AATAGAAAGGAAAGTAAGGA+GGG - chr4.3:80950371-80950390 MS.gene037588:intron 30.0%
ACAAACTAACATGACATCAT+GGG + chr4.3:80949545-80949564 None:intergenic 30.0%
ACTAACAGAAGACATATTCA+AGG - chr4.3:80952246-80952265 MS.gene037588:CDS 30.0%
AGGTAATAAAGGAAAAACAG+AGG - chr4.3:80949994-80950013 MS.gene037588:intron 30.0%
ATATTTAAAAAAAAGGGGGG+GGG - chr4.3:80949044-80949063 MS.gene037588:intron 30.0%
ATGATTCTAAATTGCAGTTG+TGG - chr4.3:80949613-80949632 MS.gene037588:intron 30.0%
ATGCAAGAATTATCAGAAAG+TGG + chr4.3:80952030-80952049 None:intergenic 30.0%
CAAAGTATATACAAACTAGC+AGG - chr4.3:80952560-80952579 MS.gene037588:CDS 30.0%
CAACATTACAACTGCAATTT+CGG + chr4.3:80949685-80949704 None:intergenic 30.0%
CACACATTTAAGGATCAAAA+TGG - chr4.3:80952371-80952390 MS.gene037588:CDS 30.0%
CATCCAAAACCTTTATATTG+CGG - chr4.3:80949714-80949733 MS.gene037588:intron 30.0%
CCATAATCCATCTGTTATAT+TGG + chr4.3:80950280-80950299 None:intergenic 30.0%
CCATGTGATAAAGAATAGAA+AGG - chr4.3:80950358-80950377 MS.gene037588:intron 30.0%
CCTTTCTATTCTTTATCACA+TGG + chr4.3:80950361-80950380 None:intergenic 30.0%
CGTAAAGCTTACCTTAAAAA+AGG + chr4.3:80948087-80948106 None:intergenic 30.0%
CTGGTGTACCATAAATTTAA+AGG - chr4.3:80950767-80950786 MS.gene037588:intron 30.0%
CTTTAAATTTATGGTACACC+AGG + chr4.3:80950769-80950788 None:intergenic 30.0%
GATTGAGTATAGTGAATCTA+AGG + chr4.3:80947958-80947977 None:intergenic 30.0%
GATTGCAATTTAAGAGAGAA+AGG - chr4.3:80948786-80948805 MS.gene037588:intron 30.0%
GTACCATAATAACAAGTAGT+GGG + chr4.3:80951787-80951806 None:intergenic 30.0%
GTATGATTGGATTGTATGAT+TGG + chr4.3:80947980-80947999 None:intergenic 30.0%
TAAATTGCAATCTCTCTCAA+AGG + chr4.3:80948778-80948797 None:intergenic 30.0%
TAATAAACAGCCTAAGGATT+TGG - chr4.3:80947569-80947588 MS.gene037588:intron 30.0%
TAATCAATGAAAGACACGTA+CGG - chr4.3:80952276-80952295 MS.gene037588:CDS 30.0%
TACAAACTAACATGACATCA+TGG + chr4.3:80949546-80949565 None:intergenic 30.0%
TACCTTATGTTCATTTCACA+AGG - chr4.3:80948532-80948551 MS.gene037588:intron 30.0%
TACCTTGTGAAATGAACATA+AGG + chr4.3:80948537-80948556 None:intergenic 30.0%
TCAGTATCTGTTACATCAAA+AGG + chr4.3:80951339-80951358 None:intergenic 30.0%
TGAAAATGCCTATAACGATT+TGG - chr4.3:80949393-80949412 MS.gene037588:intron 30.0%
TGTCATCAATATTCAAGAAC+AGG + chr4.3:80947461-80947480 None:intergenic 30.0%
TTAATGAATGCTCTCTTATC+AGG + chr4.3:80950332-80950351 None:intergenic 30.0%
TTAGGATGATAGCTTGAAAT+TGG - chr4.3:80948123-80948142 MS.gene037588:CDS 30.0%
TTCAGATTTGAGTAAGTTAG+AGG - chr4.3:80947731-80947750 MS.gene037588:CDS 30.0%
TTCCAAAACCAAATCGTTAT+AGG + chr4.3:80949404-80949423 None:intergenic 30.0%
TTGCAATTTAAGAGAGAAAG+GGG - chr4.3:80948788-80948807 MS.gene037588:intron 30.0%
! AGAATTGTGTTGTTAATTGG+TGG - chr4.3:80949765-80949784 MS.gene037588:intron 30.0%
! AGTGATTCACATGGATTTTT+GGG + chr4.3:80947429-80947448 None:intergenic 30.0%
! ATTCTTGTTTGTGATCATTG+TGG + chr4.3:80947293-80947312 None:intergenic 30.0%
! CTCTGTCTATTAAGATTTTG+AGG + chr4.3:80947164-80947183 None:intergenic 30.0%
! CTGTCTATTAAGATTTTGAG+GGG + chr4.3:80947162-80947181 None:intergenic 30.0%
! GAATAATCTAAGGTACAAGT+GGG + chr4.3:80950727-80950746 None:intergenic 30.0%
! GACGTAGATTTTGTAAGAAT+TGG + chr4.3:80948011-80948030 None:intergenic 30.0%
! GGGTTTTTGTTAAGGAAAAT+GGG - chr4.3:80947625-80947644 MS.gene037588:CDS 30.0%
! GTGTCTTTCATTGATTAGTT+TGG + chr4.3:80952273-80952292 None:intergenic 30.0%
! TCAAAATGGGGTTTTTGTTA+AGG - chr4.3:80947617-80947636 MS.gene037588:intron 30.0%
! TCAAAATTTACACTGACTAG+TGG - chr4.3:80952490-80952509 MS.gene037588:CDS 30.0%
! TGAATAATCTAAGGTACAAG+TGG + chr4.3:80950728-80950747 None:intergenic 30.0%
! TTAGGTGTAACTTCATTTTG+TGG - chr4.3:80948213-80948232 MS.gene037588:CDS 30.0%
!! ACTACTTGTTATTATGGTAC+GGG - chr4.3:80951787-80951806 MS.gene037588:intron 30.0%
!! CACTACTTGTTATTATGGTA+CGG - chr4.3:80951786-80951805 MS.gene037588:intron 30.0%
!! CCAATATAACAGATGGATTA+TGG - chr4.3:80950277-80950296 MS.gene037588:intron 30.0%
!! CGCATTTTAATGCAATAACA+AGG + chr4.3:80949651-80949670 None:intergenic 30.0%
!! TAAGAGAGCATTCATTAAGA+AGG - chr4.3:80950334-80950353 MS.gene037588:intron 30.0%
!! TTTCTTTTGGTTAGTCAGTT+TGG + chr4.3:80952305-80952324 None:intergenic 30.0%
!!! ATCTTCTTTTGACTTGTTTG+AGG + chr4.3:80951947-80951966 None:intergenic 30.0%
AACAACTTGAATACCCTCAT+TGG - chr4.3:80948185-80948204 MS.gene037588:CDS 35.0%
AACACACTGTAAACACCTTT+GGG - chr4.3:80949422-80949441 MS.gene037588:intron 35.0%
AACTCTATCAGAACCTCAAA+GGG - chr4.3:80950617-80950636 MS.gene037588:intron 35.0%
AAGTCAAAAGAAGATGCTGT+GGG - chr4.3:80951952-80951971 MS.gene037588:intron 35.0%
AATGTAGTAGGAGGGAATAA+GGG - chr4.3:80950427-80950446 MS.gene037588:intron 35.0%
ACACATTTAAGAACCAATGG+CGG + chr4.3:80952135-80952154 None:intergenic 35.0%
ACAGAGTAACAGAATGTAGT+AGG - chr4.3:80950415-80950434 MS.gene037588:intron 35.0%
ACATAACACAGTTCGTAAGT+AGG - chr4.3:80949894-80949913 MS.gene037588:intron 35.0%
ACTTTCCTTGCAATACCATT+AGG - chr4.3:80951580-80951599 MS.gene037588:intron 35.0%
AGAAAAACAGAGGAAACAGA+GGG - chr4.3:80950035-80950054 MS.gene037588:intron 35.0%
AGGTTAAGATGTATTTGAGG+AGG + chr4.3:80951363-80951382 None:intergenic 35.0%
AGTAACAGAATGTAGTAGGA+GGG - chr4.3:80950419-80950438 MS.gene037588:intron 35.0%
ATAGAAGATAAGATAGAGGG+AGG - chr4.3:80951856-80951875 MS.gene037588:intron 35.0%
ATAGAGTTCAACAGGACTTA+AGG + chr4.3:80950605-80950624 None:intergenic 35.0%
ATCCAGACTTTCATTATACG+TGG - chr4.3:80947915-80947934 MS.gene037588:CDS 35.0%
ATCCTTAGGCTGTTTATTAG+TGG + chr4.3:80947568-80947587 None:intergenic 35.0%
ATCTGTTACATCAAAAGGAC+AGG + chr4.3:80951334-80951353 None:intergenic 35.0%
ATTGGTTAACATGTTAGTCC+AGG - chr4.3:80950187-80950206 MS.gene037588:intron 35.0%
CAAACTAACATGACATCATG+GGG + chr4.3:80949544-80949563 None:intergenic 35.0%
CAATTGTTGCCGCAATATAA+AGG + chr4.3:80949726-80949745 None:intergenic 35.0%
CAGAATCTTGATTGTACTTG+TGG - chr4.3:80947537-80947556 MS.gene037588:intron 35.0%
CCTAGAGTCAAAATCATTGA+GGG - chr4.3:80949491-80949510 MS.gene037588:intron 35.0%
CGTACCATAATAACAAGTAG+TGG + chr4.3:80951788-80951807 None:intergenic 35.0%
CTCACACATTTAAGAACCAA+TGG + chr4.3:80952138-80952157 None:intergenic 35.0%
CTTCATTTCCAGATCATCAA+GGG + chr4.3:80952079-80952098 None:intergenic 35.0%
CTTTCCTTGCAATACCATTA+GGG - chr4.3:80951581-80951600 MS.gene037588:intron 35.0%
GAAAGTGACTCACACATTTA+AGG - chr4.3:80952361-80952380 MS.gene037588:CDS 35.0%
GAAATGAAGGTGATAAGCAT+TGG - chr4.3:80952090-80952109 MS.gene037588:CDS 35.0%
GAACCTCAAAGGGAATTAAT+TGG - chr4.3:80950627-80950646 MS.gene037588:intron 35.0%
GAATAGAAAGGAAAGTAAGG+AGG - chr4.3:80950370-80950389 MS.gene037588:intron 35.0%
GAGAGGTTAAGATGTATTTG+AGG + chr4.3:80951366-80951385 None:intergenic 35.0%
GAGATATATACAGTCCATTC+TGG + chr4.3:80948699-80948718 None:intergenic 35.0%
GTGTCAACAATTCATGTGTT+GGG + chr4.3:80949171-80949190 None:intergenic 35.0%
GTTTGCATTTGGCATAGTAT+CGG - chr4.3:80950299-80950318 MS.gene037588:intron 35.0%
TACGTGGAGCTAAAATTTCT+AGG - chr4.3:80947931-80947950 MS.gene037588:CDS 35.0%
TAGAGTTCAACAGGACTTAA+GGG + chr4.3:80950604-80950623 None:intergenic 35.0%
TAGTGTTCAGCGACTATAAT+GGG - chr4.3:80951821-80951840 MS.gene037588:intron 35.0%
TATTTAAAAAAAAGGGGGGG+GGG - chr4.3:80949045-80949064 MS.gene037588:intron 35.0%
TCAGAATCATCATCATTCCT+CGG - chr4.3:80947315-80947334 MS.gene037588:intron 35.0%
TCATAGATAACTAACACCTG+TGG + chr4.3:80950223-80950242 None:intergenic 35.0%
TCCTAGAGTCAAAATCATTG+AGG - chr4.3:80949490-80949509 MS.gene037588:intron 35.0%
TCCTTAGGCTGTTTATTAGT+GGG + chr4.3:80947567-80947586 None:intergenic 35.0%
TCGATAGAGTTGAGAGAAAT+TGG - chr4.3:80949929-80949948 MS.gene037588:intron 35.0%
TCTCTCTCAAAGGTAATAAG+TGG + chr4.3:80948768-80948787 None:intergenic 35.0%
TCTGTTACATCAAAAGGACA+GGG + chr4.3:80951333-80951352 None:intergenic 35.0%
TGCTTATAATAATGACCGGA+GGG - chr4.3:80949020-80949039 MS.gene037588:intron 35.0%
TGCTTATAATAGTGATCGGA+GGG + chr4.3:80948900-80948919 None:intergenic 35.0%
TGTAGTCTAGCTGTTAATGT+TGG - chr4.3:80951294-80951313 MS.gene037588:intron 35.0%
TTCATTTCCAGATCATCAAG+GGG + chr4.3:80952078-80952097 None:intergenic 35.0%
TTGCAAAAGCGACGTAAAAA+TGG - chr4.3:80951477-80951496 MS.gene037588:intron 35.0%
TTGCTTATAATAATGACCGG+AGG - chr4.3:80949019-80949038 MS.gene037588:intron 35.0%
TTGCTTATAATAGTGATCGG+AGG + chr4.3:80948901-80948920 None:intergenic 35.0%
TTGGTTAACATGTTAGTCCA+GGG - chr4.3:80950188-80950207 MS.gene037588:intron 35.0%
TTTGTGATCATTGTGGTTTG+TGG + chr4.3:80947286-80947305 None:intergenic 35.0%
! ACATGCATGGATGTTTCTTT+TGG + chr4.3:80952318-80952337 None:intergenic 35.0%
! ACTTCATTTTGTGGTTCACT+TGG - chr4.3:80948222-80948241 MS.gene037588:CDS 35.0%
! AGGCGTGATTTCTAAGAAAA+AGG - chr4.3:80951876-80951895 MS.gene037588:intron 35.0%
! CAGTGATTCACATGGATTTT+TGG + chr4.3:80947430-80947449 None:intergenic 35.0%
! GGCTAGTTCTTAAAGTTATG+AGG - chr4.3:80950822-80950841 MS.gene037588:intron 35.0%
! GGGGTTTTTGTTAAGGAAAA+TGG - chr4.3:80947624-80947643 MS.gene037588:CDS 35.0%
! GTGGAAGCATGAATAATCTA+AGG + chr4.3:80950737-80950756 None:intergenic 35.0%
! TAGAGACAAAGCTAGTTCTT+CGG + chr4.3:80948277-80948296 None:intergenic 35.0%
! TCTGTTGTAAAGCTTTTGGA+TGG - chr4.3:80951604-80951623 MS.gene037588:intron 35.0%
! TTGCCGCAATATAAAGGTTT+TGG + chr4.3:80949720-80949739 None:intergenic 35.0%
! TTGGATGGTAACTCTTTTGT+TGG - chr4.3:80951619-80951638 MS.gene037588:intron 35.0%
! TTTTATTAGGAACAACCCTC+TGG + chr4.3:80950547-80950566 None:intergenic 35.0%
!! ATCGTTTTTGACTCTTGTTG+TGG + chr4.3:80947138-80947157 None:intergenic 35.0%
!! ATTGGTGGTCATTTTAGTCT+AGG - chr4.3:80949780-80949799 MS.gene037588:intron 35.0%
!! CATTGGTTCTTAAATGTGTG+AGG - chr4.3:80952136-80952155 MS.gene037588:CDS 35.0%
!! CTACTTGTTATTATGGTACG+GGG - chr4.3:80951788-80951807 MS.gene037588:intron 35.0%
!! GATGGATTATGGTTTGCATT+TGG - chr4.3:80950288-80950307 MS.gene037588:intron 35.0%
!! TTGGTGGTCATTTTAGTCTA+GGG - chr4.3:80949781-80949800 MS.gene037588:intron 35.0%
!! TTGTTGATAACCTTCCTTTG+CGG - chr4.3:80952423-80952442 MS.gene037588:CDS 35.0%
!! TTTGACTTGTTTGAGGATCT+TGG + chr4.3:80951940-80951959 None:intergenic 35.0%
!!! ATTTTTACGTCGCTTTTGCA+AGG + chr4.3:80951478-80951497 None:intergenic 35.0%
!!! TGCCTATAACGATTTGGTTT+TGG - chr4.3:80949399-80949418 MS.gene037588:intron 35.0%
AAATCACAAACCGCAAAGGA+AGG + chr4.3:80952436-80952455 None:intergenic 40.0%
AAGCTTTACGTACCTCATCT+TGG - chr4.3:80948097-80948116 MS.gene037588:CDS 40.0%
AAGTAAGGAGGGAAATAGAG+TGG - chr4.3:80950382-80950401 MS.gene037588:intron 40.0%
ACACAGTTCGTAAGTAGGAT+AGG - chr4.3:80949899-80949918 MS.gene037588:intron 40.0%
ACCAATGTCATTATCGCTAG+TGG - chr4.3:80947883-80947902 MS.gene037588:CDS 40.0%
ACCCACTAATAAACAGCCTA+AGG - chr4.3:80947563-80947582 MS.gene037588:intron 40.0%
ACGCTGTTATTCTTACCGTT+TGG - chr4.3:80951190-80951209 MS.gene037588:intron 40.0%
ACTGCTGATGCAAATTGGTT+TGG + chr4.3:80951445-80951464 None:intergenic 40.0%
AGAGTTCAACAGGACTTAAG+GGG + chr4.3:80950603-80950622 None:intergenic 40.0%
AGCTTTACAACAGACCCTAA+TGG + chr4.3:80951598-80951617 None:intergenic 40.0%
AGGGGAATGAGGTTCAAAAT+GGG - chr4.3:80947604-80947623 MS.gene037588:intron 40.0%
AGTTCGTAAGTAGGATAGGT+AGG - chr4.3:80949903-80949922 MS.gene037588:intron 40.0%
ATGTAGTAGGAGGGAATAAG+GGG - chr4.3:80950428-80950447 MS.gene037588:intron 40.0%
ATTTAAAAAAAAGGGGGGGG+GGG - chr4.3:80949046-80949065 MS.gene037588:intron 40.0%
CAAGGGTAAACGAAATTGCT+AGG - chr4.3:80948051-80948070 MS.gene037588:CDS 40.0%
CAAGTCAAAAGAAGATGCTG+TGG - chr4.3:80951951-80951970 MS.gene037588:intron 40.0%
CACCCAATTAATTCCCTTTG+AGG + chr4.3:80950633-80950652 None:intergenic 40.0%
CCTAAGGATTTGGATTCTGA+GGG - chr4.3:80947579-80947598 MS.gene037588:intron 40.0%
CCTTCATTTCCAGATCATCA+AGG + chr4.3:80952080-80952099 None:intergenic 40.0%
CTAGCAATTTCGTTTACCCT+TGG + chr4.3:80948053-80948072 None:intergenic 40.0%
CTAGTGTTCAGCGACTATAA+TGG - chr4.3:80951820-80951839 MS.gene037588:intron 40.0%
CTCAAAGGTAATAAGTGGCT+GGG + chr4.3:80948763-80948782 None:intergenic 40.0%
CTCCACGTATAATGAAAGTC+TGG + chr4.3:80947920-80947939 None:intergenic 40.0%
CTTGGATGTCGAGTATTTGA+TGG - chr4.3:80948240-80948259 MS.gene037588:CDS 40.0%
GAACACACTGTAAACACCTT+TGG - chr4.3:80949421-80949440 MS.gene037588:intron 40.0%
GAACTCTATCAGAACCTCAA+AGG - chr4.3:80950616-80950635 MS.gene037588:intron 40.0%
GAATGTAGTAGGAGGGAATA+AGG - chr4.3:80950426-80950445 MS.gene037588:intron 40.0%
GAATTGCAACAGGAATGTGA+AGG + chr4.3:80950581-80950600 None:intergenic 40.0%
GAGAAAAACAGAGGAAACAG+AGG - chr4.3:80950034-80950053 MS.gene037588:intron 40.0%
GAGGAACGAAGCATAAAAAG+AGG - chr4.3:80949974-80949993 MS.gene037588:intron 40.0%
GAGTAACAGAATGTAGTAGG+AGG - chr4.3:80950418-80950437 MS.gene037588:intron 40.0%
GCATAACATTGGAAAGCAAG+AGG - chr4.3:80947761-80947780 MS.gene037588:CDS 40.0%
GCTACTTAAACGGTAATGTG+TGG - chr4.3:80950253-80950272 MS.gene037588:intron 40.0%
GGCAAAAAACAGAGGGAAAA+TGG - chr4.3:80950063-80950082 MS.gene037588:intron 40.0%
GGTGTCAACAATTCATGTGT+TGG + chr4.3:80949172-80949191 None:intergenic 40.0%
GTACACCAGGATACTTTATG+TGG + chr4.3:80950756-80950775 None:intergenic 40.0%
GTGCTAACATCAATGTAGTC+AGG - chr4.3:80949819-80949838 MS.gene037588:intron 40.0%
GTGTGGACCAATATAACAGA+TGG - chr4.3:80950270-80950289 MS.gene037588:intron 40.0%
GTTGTACATCAGGAATGTTG+AGG + chr4.3:80951762-80951781 None:intergenic 40.0%
TAATTCCATCAACCGTTCCA+CGG + chr4.3:80947706-80947725 None:intergenic 40.0%
TAGTGGAGAATAAGCCAGAA+TGG - chr4.3:80948682-80948701 MS.gene037588:intron 40.0%
TCATCCTAACATCCAAGATG+AGG + chr4.3:80948112-80948131 None:intergenic 40.0%
TCATTGCAAAATAACCCCCA+GGG + chr4.3:80949265-80949284 None:intergenic 40.0%
TCATTTCCAGATCATCAAGG+GGG + chr4.3:80952077-80952096 None:intergenic 40.0%
TCTCAAAGGTAATAAGTGGC+TGG + chr4.3:80948764-80948783 None:intergenic 40.0%
TCTGTTCCTATAGTTCCAGA+GGG - chr4.3:80950529-80950548 MS.gene037588:intron 40.0%
TGTTTAGTTACGGTACAGGA+AGG - chr4.3:80948813-80948832 MS.gene037588:intron 40.0%
TTACGGTACAGGAAGGAAAT+TGG - chr4.3:80948820-80948839 MS.gene037588:intron 40.0%
TTCATGCACAGTGATTCACA+TGG + chr4.3:80947438-80947457 None:intergenic 40.0%
! AGCAAGAACTGAGAGAGTTT+TGG - chr4.3:80950465-80950484 MS.gene037588:intron 40.0%
! AGCTTTGTCTCTAGAAAGCA+CGG - chr4.3:80948284-80948303 MS.gene037588:CDS 40.0%
! AGGGTCTGTTGTAAAGCTTT+TGG - chr4.3:80951600-80951619 MS.gene037588:intron 40.0%
! AGGTTCTGATAGAGTTCAAC+AGG + chr4.3:80950613-80950632 None:intergenic 40.0%
! CAAGAACTGAGAGAGTTTTG+GGG - chr4.3:80950467-80950486 MS.gene037588:intron 40.0%
! CATTGTGGTTTGTGGTTAAG+AGG + chr4.3:80947278-80947297 None:intergenic 40.0%
! CCATAATAACAAGTAGTGGG+TGG + chr4.3:80951784-80951803 None:intergenic 40.0%
! CCTTGATGATCTGGAAATGA+AGG - chr4.3:80952077-80952096 MS.gene037588:CDS 40.0%
! GAGGAATGATGATGATTCTG+AGG + chr4.3:80947316-80947335 None:intergenic 40.0%
! GCAAGAACTGAGAGAGTTTT+GGG - chr4.3:80950466-80950485 MS.gene037588:intron 40.0%
! GTTTTGCCCAGACTTCAATT+GGG + chr4.3:80949134-80949153 None:intergenic 40.0%
! TAGCATTTTCTCTTTCGCCA+GGG + chr4.3:80951111-80951130 None:intergenic 40.0%
! TGCTTCCACATAAAGTATCC+TGG - chr4.3:80950748-80950767 MS.gene037588:intron 40.0%
! TTAGCATTTTCTCTTTCGCC+AGG + chr4.3:80951112-80951131 None:intergenic 40.0%
! TTGATGTAATGGAAGCTGCA+AGG + chr4.3:80952474-80952493 None:intergenic 40.0%
!! AATTTGTTGGAAACGGATCC+AGG + chr4.3:80948159-80948178 None:intergenic 40.0%
!! CCACCCACTACTTGTTATTA+TGG - chr4.3:80951781-80951800 MS.gene037588:intron 40.0%
!! GGAAAATGGGTCGTTGTTTT+TGG - chr4.3:80947638-80947657 MS.gene037588:CDS 40.0%
!! TCTAGGGTTGGTTAAAACTC+AGG - chr4.3:80949797-80949816 MS.gene037588:intron 40.0%
!! TGGAACGGTTGATGGAATTA+GGG - chr4.3:80947706-80947725 MS.gene037588:CDS 40.0%
!! TGGTCATTTTAGTCTAGGGT+TGG - chr4.3:80949785-80949804 MS.gene037588:intron 40.0%
!! TGTTTTGGACAACCAAACTG+TGG + chr4.3:80951736-80951755 None:intergenic 40.0%
!!! CCCTCAATGATTTTGACTCT+AGG + chr4.3:80949494-80949513 None:intergenic 40.0%
AAAGGCCAAAGTTCAAACCC+TGG - chr4.3:80951091-80951110 MS.gene037588:intron 45.0%
ACCACTCTTCAGAGTAGTGT+TGG - chr4.3:80951021-80951040 MS.gene037588:intron 45.0%
ACGGAGGTCATCAAAGAACA+AGG + chr4.3:80947687-80947706 None:intergenic 45.0%
ACTGTGCTTCGACTTTACTC+TGG + chr4.3:80950110-80950129 None:intergenic 45.0%
ATCGAGATCCTACGTAGGAT+CGG - chr4.3:80949842-80949861 MS.gene037588:intron 45.0%
ATGTCATTATCGCTAGTGGC+AGG - chr4.3:80947887-80947906 MS.gene037588:CDS 45.0%
ATTTGTCAGAGGCTCATGAG+AGG + chr4.3:80951383-80951402 None:intergenic 45.0%
CACTACTCCTGTCTCATACT+GGG + chr4.3:80948667-80948686 None:intergenic 45.0%
CAGACCCTAATGGTATTGCA+AGG + chr4.3:80951588-80951607 None:intergenic 45.0%
CAGGGGAATGAGGTTCAAAA+TGG - chr4.3:80947603-80947622 MS.gene037588:intron 45.0%
CATTGCAAAATAACCCCCAG+GGG + chr4.3:80949264-80949283 None:intergenic 45.0%
CCACTCTTCAGAGTAGTGTT+GGG - chr4.3:80951022-80951041 MS.gene037588:intron 45.0%
CCCTCAGAATCCAAATCCTT+AGG + chr4.3:80947582-80947601 None:intergenic 45.0%
CCGGTGAAAAACGTAAACAC+GGG - chr4.3:80949869-80949888 MS.gene037588:intron 45.0%
CGATAATGACATTGGTCCAC+CGG + chr4.3:80947879-80947898 None:intergenic 45.0%
CGGTGAAAAACGTAAACACG+GGG - chr4.3:80949870-80949889 MS.gene037588:intron 45.0%
CGTACCTCATCTTGGATGTT+AGG - chr4.3:80948105-80948124 MS.gene037588:CDS 45.0%
CTCATTGCAAAATAACCCCC+AGG + chr4.3:80949266-80949285 None:intergenic 45.0%
CTCTGACTGCTGATGCAAAT+TGG + chr4.3:80951450-80951469 None:intergenic 45.0%
CTCTGTTCCTATAGTTCCAG+AGG - chr4.3:80950528-80950547 MS.gene037588:intron 45.0%
CTGCAAATCACAAACCGCAA+AGG + chr4.3:80952440-80952459 None:intergenic 45.0%
GAAATTGGAGACCTAAGTCC+TGG - chr4.3:80948138-80948157 MS.gene037588:CDS 45.0%
GACAACCAAACTGTGGTGAT+AGG + chr4.3:80951729-80951748 None:intergenic 45.0%
GACTTAAGGGGAATTGCAAC+AGG + chr4.3:80950591-80950610 None:intergenic 45.0%
GAGGAAGTCACGCATAACAT+TGG - chr4.3:80947750-80947769 MS.gene037588:CDS 45.0%
GATGCATGTAGGAGCAATGT+GGG + chr4.3:80949092-80949111 None:intergenic 45.0%
GCCACTAGCGATAATGACAT+TGG + chr4.3:80947887-80947906 None:intergenic 45.0%
GCCGGTGAAAAACGTAAACA+CGG - chr4.3:80949868-80949887 MS.gene037588:intron 45.0%
GCCTAAGGATTTGGATTCTG+AGG - chr4.3:80947578-80947597 MS.gene037588:intron 45.0%
GCTTCGACTTTACTCTGGTT+AGG + chr4.3:80950105-80950124 None:intergenic 45.0%
GGAAGACGGCAAAAAACAGA+GGG - chr4.3:80950056-80950075 MS.gene037588:intron 45.0%
GGGGAATGAGGTTCAAAATG+GGG - chr4.3:80947605-80947624 MS.gene037588:intron 45.0%
GGGTTGTTCCAAACATCGTT+TGG + chr4.3:80947381-80947400 None:intergenic 45.0%
GTAAAGTCGAAGCACAGTTG+AGG - chr4.3:80950112-80950131 MS.gene037588:intron 45.0%
GTACAAGACTGTTGAGACCT+TGG - chr4.3:80951657-80951676 MS.gene037588:intron 45.0%
GTACAAGTGGGATCTCATGA+AGG + chr4.3:80950715-80950734 None:intergenic 45.0%
GTCTACCATGATCAGACCAA+GGG - chr4.3:80948034-80948053 MS.gene037588:CDS 45.0%
GTCTCAGGTTCGAATATCTG+AGG + chr4.3:80949193-80949212 None:intergenic 45.0%
GTTTACCCTTGGTCTGATCA+TGG + chr4.3:80948042-80948061 None:intergenic 45.0%
TCAGTAACCCAGTATGAGAC+AGG - chr4.3:80948657-80948676 MS.gene037588:intron 45.0%
TGAGGTAAAGTAACCGCCAT+TGG - chr4.3:80952119-80952138 MS.gene037588:CDS 45.0%
TGTCATTATCGCTAGTGGCA+GGG - chr4.3:80947888-80947907 MS.gene037588:CDS 45.0%
TGTCTACCATGATCAGACCA+AGG - chr4.3:80948033-80948052 MS.gene037588:CDS 45.0%
TGTGGTTAAGAGGCGAATGA+TGG + chr4.3:80947268-80947287 None:intergenic 45.0%
TTGCATCAGCAGTCAGAGTA+AGG - chr4.3:80951452-80951471 MS.gene037588:intron 45.0%
TTTAAAAAAAAGGGGGGGGG+GGG - chr4.3:80949047-80949066 MS.gene037588:intron 45.0%
TTTCGCCAGGGTTTGAACTT+TGG + chr4.3:80951099-80951118 None:intergenic 45.0%
! AACACTACTCTGAAGAGTGG+TGG + chr4.3:80951022-80951041 None:intergenic 45.0%
! AGAGGTTTTTGATGCTTCCG+AGG + chr4.3:80947335-80947354 None:intergenic 45.0%
! ATGTAATGGAAGCTGCAAGG+AGG + chr4.3:80952471-80952490 None:intergenic 45.0%
! ATTTGGATTCTGAGGGTCAG+GGG - chr4.3:80947586-80947605 MS.gene037588:intron 45.0%
! CCAAACATCGTTTGGAGTGA+GGG + chr4.3:80947373-80947392 None:intergenic 45.0%
! CCCGTGTTTACGTTTTTCAC+CGG + chr4.3:80949872-80949891 None:intergenic 45.0%
! CTTTGCGGTTTGTGATTTGC+AGG - chr4.3:80952438-80952457 MS.gene037588:CDS 45.0%
! GAAAGGGGCGTGTTTAGTTA+CGG - chr4.3:80948803-80948822 MS.gene037588:intron 45.0%
! GATTTGGATTCTGAGGGTCA+GGG - chr4.3:80947585-80947604 MS.gene037588:intron 45.0%
! GCTTTGTCTCTAGAAAGCAC+GGG - chr4.3:80948285-80948304 MS.gene037588:CDS 45.0%
! GGAATGTTGAGGAGCTGTTT+TGG + chr4.3:80951751-80951770 None:intergenic 45.0%
! GGTTTTGCCCAGACTTCAAT+TGG + chr4.3:80949135-80949154 None:intergenic 45.0%
! GTTTGGAGTGAGGGTTTGTA+CGG + chr4.3:80947364-80947383 None:intergenic 45.0%
! TAGTCGCTGAACACTAGCTT+TGG + chr4.3:80951817-80951836 None:intergenic 45.0%
! TCCAAACATCGTTTGGAGTG+AGG + chr4.3:80947374-80947393 None:intergenic 45.0%
! TTGTTCTTTGATGACCTCCG+TGG - chr4.3:80947686-80947705 MS.gene037588:CDS 45.0%
!! GAACAACCCTCTGGAACTAT+AGG + chr4.3:80950538-80950557 None:intergenic 45.0%
!! GATAAGCATTGGTGAAGCTG+AGG - chr4.3:80952101-80952120 MS.gene037588:CDS 45.0%
!! GCTGATGCAAATTGGTTTGG+TGG + chr4.3:80951442-80951461 None:intergenic 45.0%
!! GGGTTTGTACGGTTTTGTAG+AGG + chr4.3:80947353-80947372 None:intergenic 45.0%
!! GTGGAACGGTTGATGGAATT+AGG - chr4.3:80947705-80947724 MS.gene037588:CDS 45.0%
!! GTGTTGGGTTAGCTCATTCA+GGG + chr4.3:80949156-80949175 None:intergenic 45.0%
!! TGTGTTGGGTTAGCTCATTC+AGG + chr4.3:80949157-80949176 None:intergenic 45.0%
ACACCTAACTCGGCCAATGA+GGG + chr4.3:80948201-80948220 None:intergenic 50.0%
ACCTGTGGTCTAACTAACCC+TGG + chr4.3:80950208-80950227 None:intergenic 50.0%
AGATCCTACGTAGGATCGGT+CGG - chr4.3:80949846-80949865 MS.gene037588:intron 50.0%
ATACCCTCATTGGCCGAGTT+AGG - chr4.3:80948195-80948214 MS.gene037588:CDS 50.0%
CAGAGGAAACAGAGGGAAGA+CGG - chr4.3:80950042-80950061 MS.gene037588:intron 50.0%
CCACGTAAGACCGACTAATC+CGG - chr4.3:80947857-80947876 MS.gene037588:CDS 50.0%
CCACTACTCCTGTCTCATAC+TGG + chr4.3:80948668-80948687 None:intergenic 50.0%
CCAGTATGAGACAGGAGTAG+TGG - chr4.3:80948665-80948684 MS.gene037588:intron 50.0%
CCCTCACTCCAAACGATGTT+TGG - chr4.3:80947370-80947389 MS.gene037588:intron 50.0%
CTTGGACTCTTCCTTGTGCA+CGG - chr4.3:80951675-80951694 MS.gene037588:intron 50.0%
GGACTCGATCTTCGCTACAT+TGG - chr4.3:80950169-80950188 MS.gene037588:intron 50.0%
GGATGCATGTAGGAGCAATG+TGG + chr4.3:80949093-80949112 None:intergenic 50.0%
GGCGTGTTTAGTTACGGTAC+AGG - chr4.3:80948809-80948828 MS.gene037588:intron 50.0%
GGGAAGACGGCAAAAAACAG+AGG - chr4.3:80950055-80950074 MS.gene037588:intron 50.0%
GGTTAAGAGGCGAATGATGG+TGG + chr4.3:80947265-80947284 None:intergenic 50.0%
GTCATTATCGCTAGTGGCAG+GGG - chr4.3:80947889-80947908 MS.gene037588:CDS 50.0%
TACACCTAACTCGGCCAATG+AGG + chr4.3:80948202-80948221 None:intergenic 50.0%
TCAGGATCGAGATCCTACGT+AGG - chr4.3:80949837-80949856 MS.gene037588:intron 50.0%
TCTTGGATCCAGTGCAGTCA+AGG + chr4.3:80951923-80951942 None:intergenic 50.0%
TGGAAACGGATCCAGGACTT+AGG + chr4.3:80948152-80948171 None:intergenic 50.0%
TGGGGACCCAATTGAAGTCT+GGG - chr4.3:80949125-80949144 MS.gene037588:intron 50.0%
TGGTGGCAAGTGGAAGAGAA+AGG + chr4.3:80947248-80947267 None:intergenic 50.0%
TTCGAACCTGAGACCTAGAC+AGG - chr4.3:80949199-80949218 MS.gene037588:intron 50.0%
TTTCCAGATCATCAAGGGGG+AGG + chr4.3:80952074-80952093 None:intergenic 50.0%
! CCCAACACTACTCTGAAGAG+TGG + chr4.3:80951025-80951044 None:intergenic 50.0%
! CTTTGATGACCTCCGTGGAA+CGG - chr4.3:80947691-80947710 MS.gene037588:CDS 50.0%
! GGATTTGGATTCTGAGGGTC+AGG - chr4.3:80947584-80947603 MS.gene037588:intron 50.0%
!! CATTGGTCCACCGGATTAGT+CGG + chr4.3:80947870-80947889 None:intergenic 50.0%
!! GAAGCACAGTTGAGGTGTTG+TGG - chr4.3:80950120-80950139 MS.gene037588:intron 50.0%
!! GTAGTGGGTGGTTGTACATC+AGG + chr4.3:80951772-80951791 None:intergenic 50.0%
!! TCCAGGGTTAGTTAGACCAC+AGG - chr4.3:80950204-80950223 MS.gene037588:intron 50.0%
AAGATCGAGTCCCAGCTCGT+AGG + chr4.3:80950161-80950180 None:intergenic 55.0%
AATTGGGTCCCCACTAGCCA+GGG + chr4.3:80949118-80949137 None:intergenic 55.0%
ACCAAGAGCCTTGACTGCAC+TGG - chr4.3:80951912-80951931 MS.gene037588:intron 55.0%
ATTATCGCTAGTGGCAGGGG+CGG - chr4.3:80947892-80947911 MS.gene037588:CDS 55.0%
CCAAACTGTGGTGATAGGCC+AGG + chr4.3:80951724-80951743 None:intergenic 55.0%
CCTGGCCTATCACCACAGTT+TGG - chr4.3:80951721-80951740 MS.gene037588:intron 55.0%
CGTAAGACCGACTAATCCGG+TGG - chr4.3:80947860-80947879 MS.gene037588:CDS 55.0%
CGTGCACAAGGAAGAGTCCA+AGG + chr4.3:80951677-80951696 None:intergenic 55.0%
CTTGTGCGATCCTACGAGCT+GGG - chr4.3:80950148-80950167 MS.gene037588:intron 55.0%
GCAAAATAACCCCCAGGGGT+TGG + chr4.3:80949260-80949279 None:intergenic 55.0%
GTGGGGACCCAATTGAAGTC+TGG - chr4.3:80949124-80949143 MS.gene037588:intron 55.0%
GTGGTTAAGGCCTGGGTACT+AGG + chr4.3:80949233-80949252 None:intergenic 55.0%
TCCAGTGCAGTCAAGGCTCT+TGG + chr4.3:80951916-80951935 None:intergenic 55.0%
TCTTGTGCGATCCTACGAGC+TGG - chr4.3:80950147-80950166 MS.gene037588:intron 55.0%
TGCGGCAACAATTGCAGCTG+CGG - chr4.3:80949732-80949751 MS.gene037588:intron 55.0%
TTCCATCAACCGTTCCACGG+AGG + chr4.3:80947703-80947722 None:intergenic 55.0%
! AAGCCTCCCCCTTGATGATC+TGG - chr4.3:80952068-80952087 MS.gene037588:CDS 55.0%
! TTCTGAGGGTCAGGGGAATG+AGG - chr4.3:80947593-80947612 MS.gene037588:intron 55.0%
!! AGGCGAATGATGGTGGCAAG+TGG + chr4.3:80947258-80947277 None:intergenic 55.0%
!! CCGGATTAGTCGGTCTTACG+TGG + chr4.3:80947860-80947879 None:intergenic 55.0%
!! CGCTCGGTGTTACTCAATCC+TGG - chr4.3:80951703-80951722 MS.gene037588:intron 55.0%
ATTGGGTCCCCACTAGCCAG+GGG + chr4.3:80949117-80949136 None:intergenic 60.0%
CAATTGGGTCCCCACTAGCC+AGG + chr4.3:80949119-80949138 None:intergenic 60.0%
GACCTCCGTGGAACGGTTGA+TGG - chr4.3:80947698-80947717 MS.gene037588:CDS 60.0%
GTACCCAGGCCTTAACCACC+AGG - chr4.3:80949234-80949253 MS.gene037588:intron 60.0%
TAACCACCAGGCCAACCCCT+GGG - chr4.3:80949246-80949265 MS.gene037588:intron 60.0%
TGCGCTCCTGTCTAGGTCTC+AGG + chr4.3:80949208-80949227 None:intergenic 60.0%
TGGCCTGGTGGTTAAGGCCT+GGG + chr4.3:80949240-80949259 None:intergenic 60.0%
TTAACCACCAGGCCAACCCC+TGG - chr4.3:80949245-80949264 MS.gene037588:intron 60.0%
TTGGCCTGGTGGTTAAGGCC+TGG + chr4.3:80949241-80949260 None:intergenic 60.0%
! CTAGGAGTGCGCTCCTGTCT+AGG + chr4.3:80949215-80949234 None:intergenic 60.0%
!! AGGGGTTGGCCTGGTGGTTA+AGG + chr4.3:80949246-80949265 None:intergenic 60.0%
AACCACCAGGCCAACCCCTG+GGG - chr4.3:80949247-80949266 MS.gene037588:intron 65.0%
AGCCAGGGGCGGATGCATGT+AGG + chr4.3:80949103-80949122 None:intergenic 65.0%
ATGCATCCGCCCCTGGCTAG+TGG - chr4.3:80949105-80949124 MS.gene037588:intron 65.0%
CCTACGTAGGATCGGTCGGC+CGG - chr4.3:80949850-80949869 MS.gene037588:intron 65.0%
CTCCTACATGCATCCGCCCC+TGG - chr4.3:80949098-80949117 MS.gene037588:intron 65.0%
CTTGTGCACGGACTCGCGCT+CGG - chr4.3:80951687-80951706 MS.gene037588:intron 65.0%
GGAGCGCACTCCTAGTACCC+AGG - chr4.3:80949220-80949239 MS.gene037588:intron 65.0%
TGCATCCGCCCCTGGCTAGT+GGG - chr4.3:80949106-80949125 MS.gene037588:intron 65.0%
!! ATAACCCCCAGGGGTTGGCC+TGG + chr4.3:80949255-80949274 None:intergenic 65.0%
ACCACCAGGCCAACCCCTGG+GGG - chr4.3:80949248-80949267 MS.gene037588:intron 70.0%
CCGGCCGACCGATCCTACGT+AGG + chr4.3:80949853-80949872 None:intergenic 70.0%
CGAGCGCGAGTCCGTGCACA+AGG + chr4.3:80951689-80951708 None:intergenic 70.0%
GCATCCGCCCCTGGCTAGTG+GGG - chr4.3:80949107-80949126 MS.gene037588:intron 70.0%
GGGTCCCCACTAGCCAGGGG+CGG + chr4.3:80949114-80949133 None:intergenic 75.0%
! AGGGGGGGGGGGGAAGCATG+TGG - chr4.3:80949057-80949076 MS.gene037588:intron 75.0%
!! ACCCCCAGGGGTTGGCCTGG+TGG + chr4.3:80949252-80949271 None:intergenic 75.0%


Chromosome Type Strat End Strand Name
chr4.3 gene 80947120 80952621 80947120 ID=MS.gene037588
chr4.3 mRNA 80947120 80952621 80947120 ID=MS.gene037588.t1;Parent=MS.gene037588
chr4.3 exon 80951959 80952621 80951959 ID=MS.gene037588.t1.exon1;Parent=MS.gene037588.t1
chr4.3 CDS 80951959 80952621 80951959 ID=cds.MS.gene037588.t1;Parent=MS.gene037588.t1
chr4.3 exon 80947619 80948389 80947619 ID=MS.gene037588.t1.exon2;Parent=MS.gene037588.t1
chr4.3 CDS 80947619 80948389 80947619 ID=cds.MS.gene037588.t1;Parent=MS.gene037588.t1
chr4.3 exon 80947120 80947281 80947120 ID=MS.gene037588.t1.exon3;Parent=MS.gene037588.t1
chr4.3 CDS 80947120 80947281 80947120 ID=cds.MS.gene037588.t1;Parent=MS.gene037588.t1
Gene Sequence

>MS.gene037588

ATGGCTTCTTCGCAACCACAACAAGAGTCAAAAACGATTCCCCTCAAAATCTTAATAGACAGAGAAAACAACAAAGTAGTCGCTGTAGAAGCAACAAAAGACTTCATCGACACTCTCTTCAGCTTCCTTTCTCTTCCACTTGCCACCATCATTCGCCTCTTAACCACAAACCACAATGATCACAAACAAGAATCCTCAGAATCATCATCATTCCTCGGAAGCATCAAAAACCTCTACAAAACCGTACAAACCCTCACTCCAAACGATGTTTGGAACAACCCTGTTTACAAACAAATGTTGTTGAATCCCAAAAATCCATGTGAATCACTGTGCATGAACCTGTTCTTGAATATTGATGACACTGAATCATCAAGTAAGTTTTTAGTGTGTGATGCTTGTAACAAGTTTACGACTTTTCAGAATCTTGATTGTACTTGTGGAAAACCCACTAATAAACAGCCTAAGGATTTGGATTCTGAGGGTCAGGGGAATGAGGTTCAAAATGGGGTTTTTGTTAAGGAAAATGGGTCGTTGTTTTTGGTGTTTGATGATTTGAAGATTGTGCCTTGTTCTTTGATGACCTCCGTGGAACGGTTGATGGAATTAGGGTATTCAGATTTGAGTAAGTTAGAGGAAGTCACGCATAACATTGGAAAGCAAGAGGTAATTGTATTGTGTTTTGTGTTGTAAACTTAATTTTGCAGTGTATTTTGTTTTGTTTTTGGAAACTCGGTATTCCACGTAAGACCGACTAATCCGGTGGACCAATGTCATTATCGCTAGTGGCAGGGGCGGATCCAGACTTTCATTATACGTGGAGCTAAAATTTCTAGGTCCTTAGATTCACTATACTCAATCCAATCATACAATCCAATCATACAAATTAAACCAATTCTTACAAAATCTACGTCTTTGTCTACCATGATCAGACCAAGGGTAAACGAAATTGCTAGGTTTATAACGACCTTTTTTAAGGTAAGCTTTACGTACCTCATCTTGGATGTTAGGATGATAGCTTGAAATTGGAGACCTAAGTCCTGGATCCGTTTCCAACAAATTGTAATCAACAACTTGAATACCCTCATTGGCCGAGTTAGGTGTAACTTCATTTTGTGGTTCACTTGGATGTCGAGTATTTGATGGTTCTTGACTAGCCGAAGAACTAGCTTTGTCTCTAGAAAGCACGGGAAAAAATTTCTTCATCCTATAAAAGTAAAACACACAATCATTGTTACAAGTAAGTAACAAGAATATCACTAGTCATTAAATCATAAACAAATACAAAATACATATATATCGGGATACATTATAACAGCTTCATAGAACTCTTTGTCACATTTGATATAGCAGCATTATCAATTGTTCAATAAAAGATGGCTAGTTCAACCATTACAATTCTTAGTATAGTTTTCTACCTTATGTTCATTTCACAAGGTAGTATTTTCTTCCACAATTTTTGTAAATTATTATTCAAAACTGTCATAATTTTTTTTTGGTGATTATCTCAGGTTATAGCCTATGTTCATTGAAAGATATTTCAGTAACCCAGTATGAGACAGGAGTAGTGGAGAATAAGCCAGAATGGACTGTATATATCTCCAAAAAAATATCATTATGCTCAAAGAAAATTGCTTTTCTGACCCAGCCACTTATTACCTTTGAGAGAGATTGCAATTTAAGAGAGAAAGGGGCGTGTTTAGTTACGGTACAGGAAGGAAATTGGAATAGAAAATGAAAGAGAGAGAGTGAGACACACATCAGTCTTCTGTTTAATATACCCTCCGATCACTATTATAAGCAAATGTTTGCATTTTAGATTCATTCATTGAATGATGTATGTGACCTACAACAAAGACCATATATATCATTAATTGTTGAATGAACCTAAAGTGTAAACTTTTGCTTATAATAATGACCGGAGGGTATATTTAAAAAAAAGGGGGGGGGGGGAAGCATGTGGAGCTATAGTCCCACATTGCTCCTACATGCATCCGCCCCTGGCTAGTGGGGACCCAATTGAAGTCTGGGCAAAACCCTGAATGAGCTAACCCAACACATGAATTGTTGACACCTCAGATATTCGAACCTGAGACCTAGACAGGAGCGCACTCCTAGTACCCAGGCCTTAACCACCAGGCCAACCCCTGGGGGTTATTTTGCAATGAGTTTTTCTATTTTAGAGTAGTGGTGAATATGCCTTACAAATCTGTGTTTTTTTAGCTTTTGGCATTGATGATTCAAATGAACTTATAGCATCATTTGAATTACGATATTGAAAATGCCTATAACGATTTGGTTTTGGAACACACTGTAAACACCTTTGGGTAATTATGAATCATTAGGGAAAAGATTCAAGATTTCTCTATTGAATCCTAGAGTCAAAATCATTGAGGGTTGAGAGAAAAAATAGAAATTAGGAAACCCCATGATGTCATGTTAGTTTGTAGAGTAAGAAAAATTTGAAAGAAAGTTTTTGAAATGAAATTTTCAGTCATGATTCTAAATTGCAGTTGTGGTTACAATGTGAACCTTGTTATTGCATTAAAATGCGGGTAAATGTTGCCGAAATTGCAGTTGTAATGTTGTTGCAGAGACATCCAAAACCTTTATATTGCGGCAACAATTGCAGCTGCGGAGCGCAATTTAGAATTGTGTTGTTAATTGGTGGTCATTTTAGTCTAGGGTTGGTTAAAACTCAGGTGCTAACATCAATGTAGTCAGGATCGAGATCCTACGTAGGATCGGTCGGCCGGTGAAAAACGTAAACACGGGGAACATAACACAGTTCGTAAGTAGGATAGGTAGGATGTCGATAGAGTTGAGAGAAATTGGTAGAAAAAATAGAGGGAAAACAGAGGAACGAAGCATAAAAAGAGGTAATAAAGGAAAAACAGAGGAACCAAGCAACAAAATAGAGAAAAACAGAGGAAACAGAGGGAAGACGGCAAAAAACAGAGGGAAAATGGCAAAAACAGAGCAAAACCTAACCAGAGTAAAGTCGAAGCACAGTTGAGGTGTTGTGGCACGTCTTGTGCGATCCTACGAGCTGGGACTCGATCTTCGCTACATTGGTTAACATGTTAGTCCAGGGTTAGTTAGACCACAGGTGTTAGTTATCTATGAGTATCAAAATGCTACTTAAACGGTAATGTGTGGACCAATATAACAGATGGATTATGGTTTGCATTTGGCATAGTATCGGTTAAGAACCTGATAAGAGAGCATTCATTAAGAAGGTCCATGTGATAAAGAATAGAAAGGAAAGTAAGGAGGGAAATAGAGTGGTTATAAACTGACAGAGTAACAGAATGTAGTAGGAGGGAATAAGGGGCTGTTGCAGAAGCAAGCAAGAACTGAGAGAGTTTTGGGGCACTTTTGAATTAGCCTAGAGTTTATCACTTTCTTTTGCTCTGTTCCTATAGTTCCAGAGGGTTGTTCCTAATAAAATTCTTCTTTTTCCTTCACATTCCTGTTGCAATTCCCCTTAAGTCCTGTTGAACTCTATCAGAACCTCAAAGGGAATTAATTGGGTGAAAGAGATGATAATTTTTACTGATTGGATGAAATTGAACAAAACCAAATAGAAATTTCTCCTTCATGAGATCCCACTTGTACCTTAGATTATTCATGCTTCCACATAAAGTATCCTGGTGTACCATAAATTTAAAGGGTAAACGTTATTTAAAAAACATTCACAATTTGGGCTAGTTCTTAAAGTTATGAGGCTAGTTGTTATACTTAGTTATGTACACACTATAACTCTCAAGTTAGAAATTGTTAATAATTTTGTCCTTTGAATGTTACTTACAAGTTATATTGGTGTTACTGCTACACGATCAAGTACAACATGCTGAAATCTAATTTTCGCTGTGTCTAAGAGCTTCAGAAACATGTTTTCTCCACCACTCTTCAGAGTAGTGTTGGGTAGCTCAACTAGTTTGAGTTAAGAGTTAAAGTTAGTAAATGAGTTAAAAGGCCAAAGTTCAAACCCTGGCGAAAGAGAAAATGCTAACATGACTATTAATGTACAAGCATTTGTAAATGTATATAAAAAAAAAAAAAAAACACGCACGCTGTTATTCTTACCGTTTGGTTTAATATCTTGCATTTCTGTTATGTGACGTGAGCTTGCTAGTGAAAGATATTTTAAATAGGTTATATTGGTATCACTGTGTGTAGTCTAGCTGTTAATGTTGGCTAAATAAATGTTCCCTGTCCTTTTGATGTAACAGATACTGAACCTCCTCAAATACATCTTAACCTCTCATGAGCCTCTGACAAATACAATTTTGAAAAGTAGCTCAAAGAACAAAGAAAATCCACCAAACCAATTTGCATCAGCAGTCAGAGTAAGGCCTTGCAAAAGCGACGTAAAAATGGATGTTAAGCTTGCGCGAAGTAAATCTCAGAAAAAAATAATATTCGCAGAAGCGAGTGAAAACTTTGTTGATTTCATTTTTACTTTCCTTGCAATACCATTAGGGTCTGTTGTAAAGCTTTTGGATGGTAACTCTTTTGTTGGATGTGTTGATAACTTGTACAAGACTGTTGAGACCTTGGACTCTTCCTTGTGCACGGACTCGCGCTCGGTGTTACTCAATCCTGGCCTATCACCACAGTTTGGTTGTCCAAAACAGCTCCTCAACATTCCTGATGTACAACCACCCACTACTTGTTATTATGGTACGGGGACGCCAAAGCTAGTGTTCAGCGACTATAATGGGAGTCATCAAATCATAGAAGATAAGATAGAGGGAGGCGTGATTTCTAAGAAAAAGGTATCAATTTATAAACCAAGAGCCTTGACTGCACTGGATCCAAGATCCTCAAACAAGTCAAAAGAAGATGCTGTGGGATTTGTGAAGAAAGCAACATTATATGCTATTGGAGATGATCTAAAAGTAAAACCACTTTCTGATAATTCTTGCATTTCATATTTGAAAGAATTAAGCCTCCCCCTTGATGATCTGGAAATGAAGGTGATAAGCATTGGTGAAGCTGAGGTAAAGTAACCGCCATTGGTTCTTAAATGTGTGAGGCAGTATGTTACTATAATTCTGAATGTATCGAAATTACAAAAACATTCTTGAATGTGACTTCTATTAGTAATTGTATGAACGAAACTAACTAACAGAAGACATATTCAAGGACCAAACTAATCAATGAAAGACACGTACGGAGACCAAACTGACTAACCAAAAGAAACATCCATGCATGTTCTTGTAACTTTTATACATTCAGGAAAGTGACTCACACATTTAAGGATCAAAATGGTTATTTACTCTTTTCTTTTGTTTTCTTTGTTGTTGATAACCTTCCTTTGCGGTTTGTGATTTGCAGGCGTTGAGCCTCCTTGCAGCTTCCATTACATCAAAATTTACACTGACTAGTGGACTAGAAAACTTTTTTATTGTGCCAAAACAAGAATCAAATTTGACATCAAAGTATATACAAACTAGCAGGCTTGATCAACTTGCAAAGAAGCCTTTAGCAGATGCCTGA
Protein sequence

>MS.gene037588.t1

MASSQPQQESKTIPLKILIDRENNKVVAVEATKDFIDTLFSFLSLPLATIIRLLTTNHNDHKQESSESSSFLGSIKNLYKTVQTLTPNDVWNNPVYKQMLLNPKNPCESLCMNLFLNIDDTESSSKFLVCDACNKFTTFQNLDCTCGKPTNKQPKDLDSEGQGNEVQNGVFVKENGSLFLVFDDLKIVPCSLMTSVERLMELGYSDLSKLEEVTHNIGKQEILNLLKYILTSHEPLTNTILKSSSKNKENPPNQFASAVRVRPCKSDVKMDVKLARSKSQKKIIFAEASENFVDFIFTFLAIPLGSVVKLLDGNSFVGCVDNLYKTVETLDSSLCTDSRSVLLNPGLSPQFGCPKQLLNIPDVQPPTTCYYGTGTPKLVFSDYNGSHQIIEDKIEGGVISKKKVSIYKPRALTALDPRSSNKSKEDAVGFVKKATLYAIGDDLKVKPLSDNSCISYLKELSLPLDDLEMKVISIGEAEALSLLAASITSKFTLTSGLENFFIVPKQESNLTSKYIQTSRLDQLAKKPLADA