Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene055088.t1 | XP_013449059.1 | 59 | 498 | 140 | 8 | 2 | 453 | 13 | 492 | 1.80E-141 | 512.7 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene055088.t1 | A0A072U0X6 | 59.0 | 498 | 140 | 8 | 2 | 453 | 13 | 492 | 1.3e-141 | 512.7 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene055088.t1 | MTR_7g066260 | 59.800 | 500 | 133 | 9 | 2 | 453 | 13 | 492 | 0.0 | 550 |
MS.gene055088.t1 | MTR_7g066340 | 53.988 | 489 | 164 | 6 | 3 | 453 | 11 | 476 | 5.72e-165 | 473 |
MS.gene055088.t1 | MTR_7g066360 | 56.338 | 497 | 135 | 12 | 5 | 452 | 15 | 478 | 4.02e-157 | 454 |
MS.gene055088.t1 | MTR_7g066290 | 54.219 | 474 | 121 | 8 | 2 | 431 | 13 | 434 | 1.33e-155 | 448 |
MS.gene055088.t1 | MTR_7g066350 | 53.863 | 466 | 145 | 9 | 3 | 426 | 8 | 445 | 8.21e-147 | 427 |
MS.gene055088.t1 | MTR_7g066570 | 51.423 | 492 | 179 | 11 | 3 | 445 | 13 | 493 | 2.29e-145 | 427 |
MS.gene055088.t1 | MTR_7g012680 | 52.954 | 457 | 174 | 12 | 3 | 436 | 13 | 451 | 6.68e-140 | 409 |
MS.gene055088.t1 | MTR_7g066310 | 50.766 | 457 | 163 | 8 | 3 | 453 | 6 | 406 | 1.23e-138 | 404 |
MS.gene055088.t1 | MTR_1g041315 | 49.241 | 461 | 163 | 7 | 3 | 414 | 13 | 451 | 3.54e-131 | 388 |
MS.gene055088.t1 | MTR_7g066400 | 47.084 | 463 | 168 | 7 | 2 | 426 | 10 | 433 | 1.61e-130 | 385 |
MS.gene055088.t1 | MTR_7g058710 | 47.454 | 491 | 171 | 11 | 3 | 430 | 11 | 477 | 4.50e-129 | 382 |
MS.gene055088.t1 | MTR_7g066580 | 48.908 | 458 | 178 | 11 | 10 | 427 | 1 | 442 | 4.25e-124 | 368 |
MS.gene055088.t1 | MTR_7g066430 | 40.040 | 497 | 219 | 10 | 1 | 430 | 1 | 485 | 1.41e-106 | 325 |
MS.gene055088.t1 | MTR_7g058700 | 44.350 | 469 | 129 | 8 | 16 | 430 | 531 | 921 | 1.88e-104 | 331 |
MS.gene055088.t1 | MTR_7g066280 | 44.575 | 424 | 171 | 8 | 83 | 453 | 1 | 413 | 6.44e-104 | 315 |
MS.gene055088.t1 | MTR_2g029400 | 44.111 | 467 | 138 | 12 | 3 | 420 | 13 | 405 | 5.51e-102 | 310 |
MS.gene055088.t1 | MTR_7g066410 | 39.571 | 513 | 214 | 14 | 4 | 430 | 10 | 512 | 1.43e-100 | 310 |
MS.gene055088.t1 | MTR_1g014060 | 42.558 | 430 | 193 | 4 | 13 | 436 | 9 | 390 | 1.26e-96 | 296 |
MS.gene055088.t1 | MTR_7g066480 | 39.655 | 464 | 191 | 8 | 3 | 432 | 15 | 423 | 9.45e-91 | 282 |
MS.gene055088.t1 | MTR_7g062280 | 37.931 | 493 | 223 | 11 | 4 | 430 | 10 | 485 | 4.57e-87 | 275 |
MS.gene055088.t1 | MTR_7g063660 | 37.037 | 486 | 224 | 11 | 4 | 430 | 9 | 471 | 2.10e-86 | 272 |
MS.gene055088.t1 | MTR_7g063920 | 38.841 | 466 | 200 | 7 | 4 | 430 | 11 | 430 | 4.33e-86 | 270 |
MS.gene055088.t1 | MTR_7g063820 | 38.843 | 484 | 222 | 11 | 5 | 430 | 11 | 478 | 1.04e-85 | 271 |
MS.gene055088.t1 | MTR_7g062300 | 37.895 | 475 | 230 | 11 | 4 | 428 | 12 | 471 | 3.13e-85 | 269 |
MS.gene055088.t1 | MTR_7g063900 | 39.796 | 490 | 215 | 12 | 4 | 430 | 10 | 482 | 1.61e-84 | 268 |
MS.gene055088.t1 | MTR_7g063880 | 40.167 | 478 | 211 | 17 | 4 | 431 | 11 | 463 | 2.36e-84 | 267 |
MS.gene055088.t1 | MTR_7g063880 | 29.464 | 224 | 135 | 7 | 221 | 424 | 6 | 226 | 2.71e-11 | 65.9 |
MS.gene055088.t1 | MTR_7g066490 | 39.121 | 455 | 190 | 9 | 4 | 432 | 16 | 409 | 5.29e-84 | 264 |
MS.gene055088.t1 | MTR_7g063830 | 38.445 | 463 | 213 | 11 | 5 | 430 | 11 | 438 | 2.93e-81 | 258 |
MS.gene055088.t1 | MTR_3g007740 | 39.019 | 469 | 209 | 12 | 4 | 430 | 9 | 442 | 2.41e-80 | 256 |
MS.gene055088.t1 | MTR_3g007740 | 28.767 | 219 | 123 | 8 | 225 | 424 | 8 | 212 | 3.98e-11 | 65.1 |
MS.gene055088.t1 | MTR_7g063840 | 36.632 | 475 | 234 | 10 | 5 | 430 | 11 | 467 | 3.35e-80 | 256 |
MS.gene055088.t1 | MTR_7g063840 | 29.864 | 221 | 133 | 9 | 223 | 424 | 7 | 224 | 3.06e-12 | 68.9 |
MS.gene055088.t1 | MTR_4g019310 | 34.739 | 498 | 233 | 14 | 7 | 430 | 11 | 490 | 1.97e-73 | 239 |
MS.gene055088.t1 | MTR_7g063890 | 38.241 | 489 | 223 | 13 | 4 | 430 | 27 | 498 | 4.49e-73 | 238 |
MS.gene055088.t1 | MTR_7g063670 | 36.596 | 470 | 220 | 11 | 5 | 430 | 16 | 451 | 1.89e-72 | 236 |
MS.gene055088.t1 | MTR_3g065200 | 36.947 | 452 | 201 | 13 | 4 | 417 | 3 | 408 | 3.56e-69 | 227 |
MS.gene055088.t1 | MTR_7g066680 | 46.557 | 305 | 107 | 6 | 170 | 426 | 38 | 334 | 1.75e-67 | 219 |
MS.gene055088.t1 | MTR_7g066680 | 29.714 | 175 | 108 | 6 | 2 | 166 | 84 | 253 | 2.35e-12 | 68.6 |
MS.gene055088.t1 | MTR_4g017830 | 32.432 | 518 | 251 | 17 | 5 | 441 | 13 | 512 | 2.32e-60 | 206 |
MS.gene055088.t1 | MTR_4g019340 | 31.976 | 491 | 229 | 16 | 5 | 418 | 39 | 501 | 5.05e-58 | 199 |
MS.gene055088.t1 | MTR_4g017440 | 31.683 | 505 | 249 | 17 | 5 | 430 | 15 | 502 | 3.96e-56 | 194 |
MS.gene055088.t1 | MTR_4g017610 | 31.340 | 485 | 243 | 16 | 7 | 426 | 16 | 475 | 1.00e-52 | 184 |
MS.gene055088.t1 | MTR_4g017410 | 30.645 | 496 | 253 | 20 | 5 | 430 | 10 | 484 | 1.21e-52 | 184 |
MS.gene055088.t1 | MTR_7g066390 | 52.632 | 190 | 44 | 2 | 267 | 452 | 1 | 148 | 4.89e-51 | 170 |
MS.gene055088.t1 | MTR_4g017470 | 29.084 | 502 | 238 | 14 | 5 | 431 | 13 | 471 | 8.25e-45 | 163 |
MS.gene055088.t1 | MTR_4g017470 | 26.531 | 196 | 100 | 6 | 4 | 167 | 234 | 417 | 1.44e-11 | 66.6 |
MS.gene055088.t1 | MTR_7g063720 | 41.204 | 216 | 120 | 2 | 216 | 428 | 13 | 224 | 1.72e-42 | 150 |
MS.gene055088.t1 | MTR_7g063720 | 32.105 | 190 | 111 | 7 | 4 | 192 | 23 | 195 | 3.33e-16 | 78.2 |
MS.gene055088.t1 | MTR_4g017550 | 30.042 | 476 | 231 | 17 | 31 | 427 | 18 | 470 | 2.02e-42 | 156 |
MS.gene055088.t1 | MTR_7g062270 | 41.111 | 180 | 99 | 5 | 5 | 178 | 11 | 189 | 1.68e-32 | 127 |
MS.gene055088.t1 | MTR_2g067310 | 45.513 | 156 | 51 | 4 | 14 | 169 | 57 | 178 | 2.76e-29 | 115 |
MS.gene055088.t1 | MTR_8g023240 | 25.820 | 488 | 266 | 17 | 5 | 431 | 38 | 490 | 6.04e-27 | 114 |
MS.gene055088.t1 | MTR_7g100420 | 31.348 | 319 | 166 | 6 | 150 | 430 | 94 | 397 | 1.97e-26 | 110 |
MS.gene055088.t1 | MTR_7g100420 | 73.810 | 42 | 11 | 0 | 5 | 46 | 40 | 81 | 3.16e-12 | 68.6 |
MS.gene055088.t1 | MTR_7g063850 | 33.482 | 224 | 123 | 5 | 226 | 430 | 66 | 282 | 1.86e-24 | 103 |
MS.gene055088.t1 | MTR_1g115440 | 31.646 | 237 | 106 | 6 | 3 | 191 | 10 | 238 | 7.51e-22 | 94.4 |
MS.gene055088.t1 | MTR_7g063690 | 32.946 | 258 | 116 | 7 | 5 | 253 | 13 | 222 | 5.31e-21 | 92.0 |
MS.gene055088.t1 | MTR_8g445860 | 28.505 | 214 | 127 | 7 | 4 | 200 | 13 | 217 | 2.06e-18 | 84.7 |
MS.gene055088.t1 | MTR_8g445860 | 27.650 | 217 | 134 | 6 | 229 | 423 | 16 | 231 | 4.88e-15 | 74.7 |
MS.gene055088.t1 | MTR_4g019240 | 40.000 | 115 | 59 | 4 | 5 | 111 | 14 | 126 | 5.10e-18 | 82.0 |
MS.gene055088.t1 | MTR_0150s0010 | 31.148 | 183 | 99 | 4 | 3 | 166 | 9 | 183 | 5.23e-17 | 80.5 |
MS.gene055088.t1 | MTR_7g063760 | 52.308 | 65 | 30 | 1 | 367 | 430 | 3 | 67 | 3.94e-15 | 70.5 |
MS.gene055088.t1 | MTR_1g115450 | 38.824 | 85 | 47 | 1 | 4 | 88 | 7 | 86 | 1.62e-14 | 70.9 |
MS.gene055088.t1 | MTR_1g115455 | 38.824 | 85 | 47 | 1 | 4 | 88 | 9 | 88 | 1.59e-12 | 67.4 |
MS.gene055088.t1 | MTR_1g115470 | 40.698 | 86 | 46 | 1 | 6 | 91 | 8 | 88 | 4.59e-12 | 68.2 |
MS.gene055088.t1 | MTR_8g445920 | 38.095 | 84 | 47 | 1 | 3 | 86 | 9 | 87 | 8.33e-12 | 62.4 |
MS.gene055088.t1 | MTR_8g044890 | 38.095 | 84 | 47 | 1 | 3 | 86 | 9 | 87 | 8.33e-12 | 62.4 |
MS.gene055088.t1 | MTR_0150s0030 | 36.471 | 85 | 48 | 2 | 4 | 87 | 8 | 87 | 1.54e-11 | 63.9 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene055088.t1 | AT5G01150 | 29.448 | 489 | 267 | 13 | 6 | 433 | 11 | 482 | 6.15e-47 | 169 |
MS.gene055088.t1 | AT5G01120 | 29.388 | 490 | 264 | 13 | 5 | 426 | 10 | 485 | 6.70e-46 | 166 |
MS.gene055088.t1 | AT3G09140 | 30.040 | 496 | 259 | 15 | 4 | 426 | 9 | 489 | 2.83e-44 | 162 |
MS.gene055088.t1 | AT5G43240 | 30.000 | 520 | 274 | 18 | 5 | 452 | 10 | 511 | 1.49e-42 | 157 |
MS.gene055088.t1 | AT5G43240 | 30.000 | 520 | 274 | 18 | 5 | 452 | 10 | 511 | 1.49e-42 | 157 |
MS.gene055088.t1 | AT5G43240 | 30.000 | 520 | 274 | 18 | 5 | 452 | 10 | 511 | 1.49e-42 | 157 |
MS.gene055088.t1 | AT5G01130 | 29.095 | 464 | 264 | 14 | 4 | 430 | 9 | 444 | 1.95e-40 | 150 |
MS.gene055088.t1 | AT5G01140 | 29.032 | 496 | 269 | 14 | 6 | 452 | 11 | 472 | 2.30e-40 | 150 |
MS.gene055088.t1 | AT3G09110 | 31.988 | 322 | 173 | 8 | 6 | 291 | 11 | 322 | 3.61e-39 | 144 |
MS.gene055088.t1 | AT5G37320 | 26.667 | 495 | 273 | 19 | 5 | 433 | 12 | 482 | 3.97e-31 | 125 |
MS.gene055088.t1 | AT3G09120 | 32.492 | 317 | 159 | 11 | 4 | 277 | 6 | 310 | 6.05e-31 | 121 |
MS.gene055088.t1 | AT3G09140 | 38.571 | 140 | 83 | 2 | 4 | 140 | 9 | 148 | 3.38e-24 | 105 |
MS.gene055088.t1 | AT3G09140 | 29.242 | 277 | 161 | 9 | 170 | 426 | 256 | 517 | 4.18e-15 | 77.8 |
Find 94 sgRNAs with CRISPR-Local
Find 184 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CAATTTCCTCAATGTCATTT+AGG | 0.086793 | 7.4:-38319889 | None:intergenic |
CCAATCTTGGATTGGAATAT+TGG | 0.140891 | 7.4:-38319332 | None:intergenic |
GATCCCAAATCCCCTGTTTC+TGG | 0.158108 | 7.4:+38319761 | MS.gene055088:CDS |
GCTTCTTAACATTGCCTTTA+GGG | 0.201640 | 7.4:+38318638 | MS.gene055088:CDS |
CAAGACCTCACCACCTTCTT+TGG | 0.233427 | 7.4:-38319729 | None:intergenic |
TCCTCCAGAAACAGGGGATT+TGG | 0.246382 | 7.4:-38319765 | None:intergenic |
GAGGAAATTGTCATTAATAT+TGG | 0.258275 | 7.4:+38319902 | MS.gene055088:CDS |
AATTTCCTCAATGTCATTTA+GGG | 0.280804 | 7.4:-38319888 | None:intergenic |
GCCCTTTCCAATACCAATCT+TGG | 0.287710 | 7.4:-38319345 | None:intergenic |
AATATCGAAGCAATGAAATT+TGG | 0.294760 | 7.4:+38318691 | MS.gene055088:CDS |
AGCTTCTTAACATTGCCTTT+AGG | 0.310196 | 7.4:+38318637 | MS.gene055088:CDS |
CACAGGACCAACAACGATTA+TGG | 0.311810 | 7.4:+38319793 | MS.gene055088:CDS |
TTCCAATCCAAGATTGGTAT+TGG | 0.348676 | 7.4:+38319338 | MS.gene055088:CDS |
GTGACATATCCTCCAGAAAC+AGG | 0.363395 | 7.4:-38319773 | None:intergenic |
CCTCCAGAAACAGGGGATTT+GGG | 0.381514 | 7.4:-38319764 | None:intergenic |
CGAAGTTACATTGAAAGTTA+TGG | 0.386783 | 7.4:+38318549 | MS.gene055088:CDS |
TCAACTAGAAACATTCTGTT+TGG | 0.399046 | 7.4:+38319419 | MS.gene055088:CDS |
GGCAGGAAGTAGATCTGTTC+AGG | 0.408889 | 7.4:+38321148 | MS.gene055088:intron |
AGGAAGTGTGTGAGTCTTGT+TGG | 0.415166 | 7.4:+38318892 | MS.gene055088:CDS |
ATCTTGATGGGAAATATCTA+TGG | 0.417112 | 7.4:+38318746 | MS.gene055088:CDS |
TCCAAGATTGGTATTGGAAA+GGG | 0.431425 | 7.4:+38319344 | MS.gene055088:CDS |
TTCCAATACCAATCTTGGAT+TGG | 0.445667 | 7.4:-38319340 | None:intergenic |
AAATCCATTGTCAAAGGAGC+TGG | 0.452808 | 7.4:-38318965 | None:intergenic |
TGTCCCAGCTCCTTTGACAA+TGG | 0.457427 | 7.4:+38318961 | MS.gene055088:CDS |
CAATGGATTTGTTAAAGATA+CGG | 0.457991 | 7.4:+38318978 | MS.gene055088:CDS |
TCTGTCACCATAATCGTTGT+TGG | 0.458655 | 7.4:-38319800 | None:intergenic |
AAAGTTCTGTATGCTGAGGC+TGG | 0.459437 | 7.4:+38318589 | MS.gene055088:CDS |
CCAATATTCCAATCCAAGAT+TGG | 0.459727 | 7.4:+38319332 | MS.gene055088:CDS |
CAAAGCGTGCAAGATCTTGA+TGG | 0.464561 | 7.4:+38318733 | MS.gene055088:CDS |
CTACCTTCCATGGAGTTCCT+TGG | 0.467829 | 7.4:-38318799 | None:intergenic |
GGAAGTGTGTGAGTCTTGTT+GGG | 0.483912 | 7.4:+38318893 | MS.gene055088:CDS |
TGAGTCCAGAGAGATGTTTA+CGG | 0.491599 | 7.4:+38319573 | MS.gene055088:CDS |
AATATCAATGCAGCTTAAAG+AGG | 0.495387 | 7.4:-38319528 | None:intergenic |
TGTCATTAATATTGGAGTGA+AGG | 0.514267 | 7.4:+38319910 | MS.gene055088:CDS |
AAGCCCTCATCTGCATATGT+TGG | 0.515996 | 7.4:-38319290 | None:intergenic |
TGATTCCTTACTCCATATGT+AGG | 0.516443 | 7.4:-38319638 | None:intergenic |
CCATGGAAGGTAGTTGTAGC+AGG | 0.516445 | 7.4:+38318809 | MS.gene055088:CDS |
CCTGCTACAACTACCTTCCA+TGG | 0.518272 | 7.4:-38318809 | None:intergenic |
GGAGTGTTGCAAATGCTAGA+AGG | 0.519900 | 7.4:+38319500 | MS.gene055088:CDS |
GCAGATGCTGATAAAACTAC+TGG | 0.526501 | 7.4:+38319388 | MS.gene055088:CDS |
ATTGTCAAAGGAGCTGGGAC+AGG | 0.530991 | 7.4:-38318959 | None:intergenic |
ACTCCAATGTCATCGTTTGA+TGG | 0.532598 | 7.4:+38319836 | MS.gene055088:CDS |
TTTAACAAATCCATTGTCAA+AGG | 0.535591 | 7.4:-38318971 | None:intergenic |
GCTGTGTTTACTTCCAAAGA+AGG | 0.539163 | 7.4:+38319716 | MS.gene055088:CDS |
TCTGACCGTAAACATCTCTC+TGG | 0.540356 | 7.4:-38319578 | None:intergenic |
AGTCTTGCAATAGTCCCTAA+AGG | 0.541322 | 7.4:-38318652 | None:intergenic |
AGTCACCTAAGTAGTGTTTG+AGG | 0.548525 | 7.4:-38320071 | None:intergenic |
GGGTATCAGAAATGCCTTTG+TGG | 0.548654 | 7.4:+38318913 | MS.gene055088:CDS |
CATTAATATTGGAGTGAAGG+AGG | 0.549474 | 7.4:+38319913 | MS.gene055088:CDS |
CAGAGGAGTCTTCGAGAACA+AGG | 0.553892 | 7.4:-38319243 | None:intergenic |
TCAACATCTGCTTTGACTAA+CGG | 0.558327 | 7.4:+38320048 | MS.gene055088:CDS |
AAGTTCTGTATGCTGAGGCT+GGG | 0.563406 | 7.4:+38318590 | MS.gene055088:CDS |
ATCCAAGATTGGTATTGGAA+AGG | 0.566598 | 7.4:+38319343 | MS.gene055088:CDS |
ATCAGAAATGCCTTTGTGGA+AGG | 0.568641 | 7.4:+38318917 | MS.gene055088:CDS |
AAAGCGTGCAAGATCTTGAT+GGG | 0.571030 | 7.4:+38318734 | MS.gene055088:CDS |
GATTATGGTGACAGACGAGC+TGG | 0.571222 | 7.4:+38319808 | MS.gene055088:CDS |
CCTACACTTCCAGTCGTCAC+AGG | 0.583036 | 7.4:-38318872 | None:intergenic |
TTCACATCTAGAAAGAATGA+AGG | 0.586950 | 7.4:+38319862 | MS.gene055088:CDS |
ATTGGCTTACCCTCTTCAGA+TGG | 0.594507 | 7.4:-38319314 | None:intergenic |
GTTTCTGGAGGATATGTCAC+AGG | 0.594537 | 7.4:+38319776 | MS.gene055088:CDS |
GAAACCAACATATGCAGATG+AGG | 0.595214 | 7.4:+38319286 | MS.gene055088:CDS |
TGAGGGCTTACCATCTGAAG+AGG | 0.596168 | 7.4:+38319304 | MS.gene055088:CDS |
AACGGCCTCAAACACTACTT+AGG | 0.596286 | 7.4:+38320066 | MS.gene055088:CDS |
CCCAAATCCCCTGTTTCTGG+AGG | 0.597019 | 7.4:+38319764 | MS.gene055088:CDS |
AATCCATTGTCAAAGGAGCT+GGG | 0.597076 | 7.4:-38318964 | None:intergenic |
ATCTGCTTACCCTCTTCAGA+TGG | 0.600894 | 7.4:-38319371 | None:intergenic |
TGACATATCCTCCAGAAACA+GGG | 0.601751 | 7.4:-38319772 | None:intergenic |
TGGGAAATATCTATGGTCAA+AGG | 0.602410 | 7.4:+38318753 | MS.gene055088:CDS |
ACTCAAGCCAAGGAACTCCA+TGG | 0.606428 | 7.4:+38318792 | MS.gene055088:CDS |
TTTAAGATAAAGTCTGTCAG+AGG | 0.610371 | 7.4:-38319260 | None:intergenic |
ACACCATCAAACGATGACAT+TGG | 0.611312 | 7.4:-38319839 | None:intergenic |
AAGAAATGCTACTCAAGCCA+AGG | 0.611550 | 7.4:+38318782 | MS.gene055088:CDS |
AAAGGGCTTACCATCTGAAG+AGG | 0.612181 | 7.4:+38319361 | MS.gene055088:CDS |
CATTCTGTTTGGTATAGCAG+AGG | 0.612193 | 7.4:+38319430 | MS.gene055088:CDS |
TACTTCCAAAGAAGGTGGTG+AGG | 0.612651 | 7.4:+38319724 | MS.gene055088:CDS |
TTTCCTCAATGTCATTTAGG+GGG | 0.620430 | 7.4:-38319886 | None:intergenic |
AGGGACTATTGCAAGACTAG+TGG | 0.623463 | 7.4:+38318657 | MS.gene055088:CDS |
CCTGTGACGACTGGAAGTGT+AGG | 0.626530 | 7.4:+38318872 | MS.gene055088:CDS |
ATTTCCTCAATGTCATTTAG+GGG | 0.628156 | 7.4:-38319887 | None:intergenic |
GTGTTTACTTCCAAAGAAGG+TGG | 0.630600 | 7.4:+38319719 | MS.gene055088:CDS |
AAACAAAGTTCTGTATGCTG+AGG | 0.630952 | 7.4:+38318585 | MS.gene055088:CDS |
AGTTACATTGAAAGTTATGG+TGG | 0.634199 | 7.4:+38318552 | MS.gene055088:CDS |
AAACCAACATATGCAGATGA+GGG | 0.635875 | 7.4:+38319287 | MS.gene055088:CDS |
AAGCCAAGGAACTCCATGGA+AGG | 0.641089 | 7.4:+38318796 | MS.gene055088:CDS |
AGTATGTTACCTGTGACGAC+TGG | 0.645713 | 7.4:+38318863 | MS.gene055088:CDS |
TCACAGGTAACATACTGCAC+CGG | 0.655324 | 7.4:-38318856 | None:intergenic |
ACTGAACATCGATGACACAC+CGG | 0.657838 | 7.4:+38318837 | MS.gene055088:CDS |
GAGGGCTTACCATCTGAAGA+GGG | 0.666261 | 7.4:+38319305 | MS.gene055088:CDS |
AAGGGCTTACCATCTGAAGA+GGG | 0.666261 | 7.4:+38319362 | MS.gene055088:CDS |
GACATATCCTCCAGAAACAG+GGG | 0.675682 | 7.4:-38319771 | None:intergenic |
TGTGGAAGGTATTGTGACAG+TGG | 0.681551 | 7.4:+38318931 | MS.gene055088:CDS |
GTTAGTCAAAGCAGATGTTG+AGG | 0.693625 | 7.4:-38320046 | None:intergenic |
ATTTGCAACACTCCTCCGAG+AGG | 0.714089 | 7.4:-38319491 | None:intergenic |
TGTCACAATACCTTCCACAA+AGG | 0.718337 | 7.4:-38318927 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | TGTAAAAATTTATATTTCCA+AGG | - | chr7.4:38320203-38320222 | None:intergenic | 15.0% |
!!! | AATTTCTATATTTTTATCAC+TGG | + | chr7.4:38319158-38319177 | MS.gene055088:intron | 15.0% |
!! | ACGTAATTATCTAAAGATAA+AGG | - | chr7.4:38320317-38320336 | None:intergenic | 20.0% |
!! | AGTAATTAAAAACGAACAAA+AGG | + | chr7.4:38321001-38321020 | MS.gene055088:intron | 20.0% |
!! | ATATCTATGTTTATATGTGT+AGG | + | chr7.4:38319199-38319218 | MS.gene055088:intron | 20.0% |
!!! | TAGCTTAATTTTTCTTCTTT+TGG | - | chr7.4:38320878-38320897 | None:intergenic | 20.0% |
!!! | TATAAGCTTAATTTTTCCAT+AGG | - | chr7.4:38320908-38320927 | None:intergenic | 20.0% |
! | AAGAAGAAAAATTAAGCTAG+AGG | + | chr7.4:38320879-38320898 | MS.gene055088:intron | 25.0% |
! | AATATCGAAGCAATGAAATT+TGG | + | chr7.4:38318691-38318710 | MS.gene055088:CDS | 25.0% |
! | AGTAAGTTTGCATTAAAAAG+TGG | - | chr7.4:38320247-38320266 | None:intergenic | 25.0% |
! | CAAGGCAAAATTTCATTTAA+AGG | - | chr7.4:38320185-38320204 | None:intergenic | 25.0% |
! | GAAAGATTGAAATGTAAGAA+GGG | + | chr7.4:38320642-38320661 | MS.gene055088:intron | 25.0% |
! | GAACATAGAAAAAAGAAAGA+AGG | + | chr7.4:38320617-38320636 | MS.gene055088:intron | 25.0% |
! | GAGGAAATTGTCATTAATAT+TGG | + | chr7.4:38319902-38319921 | MS.gene055088:CDS | 25.0% |
! | GCTTATAACTGTATGTATAT+TGG | + | chr7.4:38320921-38320940 | MS.gene055088:intron | 25.0% |
! | TATGATTATTAAAGCTAACG+TGG | + | chr7.4:38320547-38320566 | MS.gene055088:intron | 25.0% |
! | TGAAAGATTGAAATGTAAGA+AGG | + | chr7.4:38320641-38320660 | MS.gene055088:intron | 25.0% |
! | TTATTATATGTGCATGTACA+TGG | + | chr7.4:38321127-38321146 | MS.gene055088:intron | 25.0% |
! | TTTAACAAATCCATTGTCAA+AGG | - | chr7.4:38318974-38318993 | None:intergenic | 25.0% |
!! | AATTTCCTCAATGTCATTTA+GGG | - | chr7.4:38319891-38319910 | None:intergenic | 25.0% |
!! | ATAATTTGTATCTATGGTGA+TGG | + | chr7.4:38319990-38320009 | MS.gene055088:intron | 25.0% |
!! | CTTTAAATGAAATTTTGCCT+TGG | + | chr7.4:38320183-38320202 | MS.gene055088:intron | 25.0% |
!! | GATTGCATAATTTGTATCTA+TGG | + | chr7.4:38319984-38320003 | MS.gene055088:intron | 25.0% |
!! | TCTTGTTAACAGTATTGAAT+TGG | + | chr7.4:38320725-38320744 | MS.gene055088:intron | 25.0% |
!!! | AATAATTTTGACAGTCATGA+AGG | + | chr7.4:38321083-38321102 | MS.gene055088:intron | 25.0% |
!!! | ATAATTTTGACAGTCATGAA+GGG | + | chr7.4:38321084-38321103 | MS.gene055088:intron | 25.0% |
!!! | CAATGGATTTGTTAAAGATA+CGG | + | chr7.4:38318978-38318997 | MS.gene055088:CDS | 25.0% |
!!! | TGATCTTTTTTCCTTAATCA+TGG | + | chr7.4:38320693-38320712 | MS.gene055088:intron | 25.0% |
!!! | TGTTTTGATTGGTAAATCTT+TGG | - | chr7.4:38319696-38319715 | None:intergenic | 25.0% |
AAGAGAGAAAATCAAGAAAG+GGG | + | chr7.4:38320665-38320684 | MS.gene055088:intron | 30.0% | |
AATATCAATGCAGCTTAAAG+AGG | - | chr7.4:38319531-38319550 | None:intergenic | 30.0% | |
AATGATCTAGTAAAAGGTCT+AGG | + | chr7.4:38319039-38319058 | MS.gene055088:intron | 30.0% | |
AGTTACATTGAAAGTTATGG+TGG | + | chr7.4:38318552-38318571 | MS.gene055088:CDS | 30.0% | |
ATCTTGATGGGAAATATCTA+TGG | + | chr7.4:38318746-38318765 | MS.gene055088:CDS | 30.0% | |
ATGCCTAATGATCTAGTAAA+AGG | + | chr7.4:38319033-38319052 | MS.gene055088:intron | 30.0% | |
CCATATGTAGGAAAAATTTG+AGG | - | chr7.4:38319629-38319648 | None:intergenic | 30.0% | |
CGAAGTTACATTGAAAGTTA+TGG | + | chr7.4:38318549-38318568 | MS.gene055088:CDS | 30.0% | |
GAAGAGAGAAAATCAAGAAA+GGG | + | chr7.4:38320664-38320683 | MS.gene055088:intron | 30.0% | |
GTATATGGTATGAAGTATAC+CGG | + | chr7.4:38320789-38320808 | MS.gene055088:intron | 30.0% | |
TCAACTAGAAACATTCTGTT+TGG | + | chr7.4:38319419-38319438 | MS.gene055088:CDS | 30.0% | |
TCATATGATCTAAGGGTAAT+GGG | + | chr7.4:38320948-38320967 | MS.gene055088:intron | 30.0% | |
TCTCGTCGTACATTATAATT+AGG | + | chr7.4:38320119-38320138 | MS.gene055088:intron | 30.0% | |
TGGATGTTCATATGATCTAA+GGG | + | chr7.4:38320941-38320960 | MS.gene055088:intron | 30.0% | |
TGTCATTAATATTGGAGTGA+AGG | + | chr7.4:38319910-38319929 | MS.gene055088:CDS | 30.0% | |
TTCACATCTAGAAAGAATGA+AGG | + | chr7.4:38319862-38319881 | MS.gene055088:CDS | 30.0% | |
TTCATATGATCTAAGGGTAA+TGG | + | chr7.4:38320947-38320966 | MS.gene055088:intron | 30.0% | |
TTGGATGTTCATATGATCTA+AGG | + | chr7.4:38320940-38320959 | MS.gene055088:intron | 30.0% | |
! | AGACCTTTTACTAGATCATT+AGG | - | chr7.4:38319039-38319058 | None:intergenic | 30.0% |
! | ATTTCCTCAATGTCATTTAG+GGG | - | chr7.4:38319890-38319909 | None:intergenic | 30.0% |
! | CAATTTCCTCAATGTCATTT+AGG | - | chr7.4:38319892-38319911 | None:intergenic | 30.0% |
! | CCTCAAATTTTTCCTACATA+TGG | + | chr7.4:38319626-38319645 | MS.gene055088:CDS | 30.0% |
! | TTCTACCTTTTGCTTCTTTA+GGG | - | chr7.4:38321198-38321217 | None:intergenic | 30.0% |
! | TTTAAGATAAAGTCTGTCAG+AGG | - | chr7.4:38319263-38319282 | None:intergenic | 30.0% |
! | TTTCTACCTTTTGCTTCTTT+AGG | - | chr7.4:38321199-38321218 | None:intergenic | 30.0% |
! | TTTTTCCTACATATGGAGTA+AGG | + | chr7.4:38319633-38319652 | MS.gene055088:CDS | 30.0% |
!! | ACGACGAGATTTTGATAATT+TGG | - | chr7.4:38320108-38320127 | None:intergenic | 30.0% |
AAAACGAACAAAAGGTGAGA+AGG | + | chr7.4:38321009-38321028 | MS.gene055088:intron | 35.0% | |
AAACAAAGTTCTGTATGCTG+AGG | + | chr7.4:38318585-38318604 | MS.gene055088:CDS | 35.0% | |
AAACCAACATATGCAGATGA+GGG | + | chr7.4:38319287-38319306 | MS.gene055088:CDS | 35.0% | |
AAACGAACAAAAGGTGAGAA+GGG | + | chr7.4:38321010-38321029 | MS.gene055088:intron | 35.0% | |
AACACTACTTATCAGCAAGA+AGG | + | chr7.4:38319110-38319129 | MS.gene055088:intron | 35.0% | |
AGCTTCTTAACATTGCCTTT+AGG | + | chr7.4:38318637-38318656 | MS.gene055088:CDS | 35.0% | |
ATTAAGCTAGAGGAAACCTA+TGG | + | chr7.4:38320889-38320908 | MS.gene055088:intron | 35.0% | |
ATTCCTTAATCATTGCCCTT+AGG | - | chr7.4:38320162-38320181 | None:intergenic | 35.0% | |
CATATGATCTAAGGGTAATG+GGG | + | chr7.4:38320949-38320968 | MS.gene055088:intron | 35.0% | |
CATTAATATTGGAGTGAAGG+AGG | + | chr7.4:38319913-38319932 | MS.gene055088:CDS | 35.0% | |
CCAATATTCCAATCCAAGAT+TGG | + | chr7.4:38319332-38319351 | MS.gene055088:CDS | 35.0% | |
CTAATGCATGCTTTAACAGA+TGG | + | chr7.4:38320830-38320849 | MS.gene055088:intron | 35.0% | |
GAAACAAGTCACCATGATTA+AGG | - | chr7.4:38320707-38320726 | None:intergenic | 35.0% | |
GATCACAAATTAGACAGAAC+CGG | - | chr7.4:38320811-38320830 | None:intergenic | 35.0% | |
GCTTCTTAACATTGCCTTTA+GGG | + | chr7.4:38318638-38318657 | MS.gene055088:CDS | 35.0% | |
GGAAGAGAGAAAATCAAGAA+AGG | + | chr7.4:38320663-38320682 | MS.gene055088:intron | 35.0% | |
TAGTTTGGTCTAGTAGCTAA+GGG | + | chr7.4:38320396-38320415 | MS.gene055088:intron | 35.0% | |
TATGTGTGTGTGTGTGTATA+TGG | + | chr7.4:38320774-38320793 | MS.gene055088:intron | 35.0% | |
TCAACATCTGCTTTGACTAA+CGG | + | chr7.4:38320048-38320067 | MS.gene055088:CDS | 35.0% | |
TGATTCCTTACTCCATATGT+AGG | - | chr7.4:38319641-38319660 | None:intergenic | 35.0% | |
TGGGAAATATCTATGGTCAA+AGG | + | chr7.4:38318753-38318772 | MS.gene055088:CDS | 35.0% | |
TTCCAATACCAATCTTGGAT+TGG | - | chr7.4:38319343-38319362 | None:intergenic | 35.0% | |
TTCCAATCCAAGATTGGTAT+TGG | + | chr7.4:38319338-38319357 | MS.gene055088:CDS | 35.0% | |
! | ATCCAAGATTGGTATTGGAA+AGG | + | chr7.4:38319343-38319362 | MS.gene055088:CDS | 35.0% |
! | ATGTAGGAAAAATTTGAGGC+TGG | - | chr7.4:38319625-38319644 | None:intergenic | 35.0% |
! | CCAATCTTGGATTGGAATAT+TGG | - | chr7.4:38319335-38319354 | None:intergenic | 35.0% |
! | TATAGCAGAGGAAGATTTTG+CGG | + | chr7.4:38319442-38319461 | MS.gene055088:CDS | 35.0% |
! | TCCAAGATTGGTATTGGAAA+GGG | + | chr7.4:38319344-38319363 | MS.gene055088:CDS | 35.0% |
! | TCTACCTTTTGCTTCTTTAG+GGG | - | chr7.4:38321197-38321216 | None:intergenic | 35.0% |
! | TTTCCTCAATGTCATTTAGG+GGG | - | chr7.4:38319889-38319908 | None:intergenic | 35.0% |
!! | AGTTTTCTCACTTTTCCTCT+CGG | + | chr7.4:38319476-38319495 | MS.gene055088:CDS | 35.0% |
!!! | GTAAACACAGCTGTTTTGAT+TGG | - | chr7.4:38319707-38319726 | None:intergenic | 35.0% |
!!! | TTTCTTCTTTTGGCTTCTTC+AGG | - | chr7.4:38320868-38320887 | None:intergenic | 35.0% |
AAAGCGTGCAAGATCTTGAT+GGG | + | chr7.4:38318734-38318753 | MS.gene055088:CDS | 40.0% | |
AAATCCATTGTCAAAGGAGC+TGG | - | chr7.4:38318968-38318987 | None:intergenic | 40.0% | |
AAGAAATGCTACTCAAGCCA+AGG | + | chr7.4:38318782-38318801 | MS.gene055088:CDS | 40.0% | |
AAGAGAGTGACAGTCATGAA+GGG | + | chr7.4:38321033-38321052 | MS.gene055088:intron | 40.0% | |
AATCCATTGTCAAAGGAGCT+GGG | - | chr7.4:38318967-38318986 | None:intergenic | 40.0% | |
AATGCTAATGAGTGCCCTTA+AGG | - | chr7.4:38320292-38320311 | None:intergenic | 40.0% | |
ACACCATCAAACGATGACAT+TGG | - | chr7.4:38319842-38319861 | None:intergenic | 40.0% | |
ACACTTTAACCAACGCCTTA+AGG | + | chr7.4:38320274-38320293 | MS.gene055088:intron | 40.0% | |
ACTACTTATCAGCAAGAAGG+AGG | + | chr7.4:38319113-38319132 | MS.gene055088:intron | 40.0% | |
ACTCCAATGTCATCGTTTGA+TGG | + | chr7.4:38319836-38319855 | MS.gene055088:CDS | 40.0% | |
AGCTAACGTGGAACATATAG+AGG | + | chr7.4:38320559-38320578 | MS.gene055088:intron | 40.0% | |
AGTCACCTAAGTAGTGTTTG+AGG | - | chr7.4:38320074-38320093 | None:intergenic | 40.0% | |
AGTCTTGCAATAGTCCCTAA+AGG | - | chr7.4:38318655-38318674 | None:intergenic | 40.0% | |
ATCAGAAATGCCTTTGTGGA+AGG | + | chr7.4:38318917-38318936 | MS.gene055088:CDS | 40.0% | |
CACTTTAACCAACGCCTTAA+GGG | + | chr7.4:38320275-38320294 | MS.gene055088:intron | 40.0% | |
CATTCTGTTTGGTATAGCAG+AGG | + | chr7.4:38319430-38319449 | MS.gene055088:CDS | 40.0% | |
CTTGCTAACTAGTGTCCTAA+GGG | + | chr7.4:38320144-38320163 | MS.gene055088:intron | 40.0% | |
GAAACCAACATATGCAGATG+AGG | + | chr7.4:38319286-38319305 | MS.gene055088:CDS | 40.0% | |
GCAGATGCTGATAAAACTAC+TGG | + | chr7.4:38319388-38319407 | MS.gene055088:CDS | 40.0% | |
GCTGTGTTTACTTCCAAAGA+AGG | + | chr7.4:38319716-38319735 | MS.gene055088:CDS | 40.0% | |
GTAGTTTGGTCTAGTAGCTA+AGG | + | chr7.4:38320395-38320414 | MS.gene055088:intron | 40.0% | |
GTGTTTACTTCCAAAGAAGG+TGG | + | chr7.4:38319719-38319738 | MS.gene055088:CDS | 40.0% | |
GTTAGTCAAAGCAGATGTTG+AGG | - | chr7.4:38320049-38320068 | None:intergenic | 40.0% | |
TATATGTGCATGTACATGGC+AGG | + | chr7.4:38321131-38321150 | MS.gene055088:intron | 40.0% | |
TCTGTCACCATAATCGTTGT+TGG | - | chr7.4:38319803-38319822 | None:intergenic | 40.0% | |
TCTTGCTAACTAGTGTCCTA+AGG | + | chr7.4:38320143-38320162 | MS.gene055088:intron | 40.0% | |
TGACATATCCTCCAGAAACA+GGG | - | chr7.4:38319775-38319794 | None:intergenic | 40.0% | |
TGAGTCCAGAGAGATGTTTA+CGG | + | chr7.4:38319573-38319592 | MS.gene055088:CDS | 40.0% | |
TGTCACAATACCTTCCACAA+AGG | - | chr7.4:38318930-38318949 | None:intergenic | 40.0% | |
TGTCCTAAGGGCAATGATTA+AGG | + | chr7.4:38320156-38320175 | MS.gene055088:intron | 40.0% | |
! | CTACCTTTTGCTTCTTTAGG+GGG | - | chr7.4:38321196-38321215 | None:intergenic | 40.0% |
! | TCATGAAGGGTGTGTAATCT+TGG | + | chr7.4:38321046-38321065 | MS.gene055088:intron | 40.0% |
!!! | GTAAGCACAGCTGTTTTGAT+TGG | - | chr7.4:38319671-38319690 | None:intergenic | 40.0% |
AAAGGGCTTACCATCTGAAG+AGG | + | chr7.4:38319361-38319380 | MS.gene055088:CDS | 45.0% | |
AAAGTTCTGTATGCTGAGGC+TGG | + | chr7.4:38318589-38318608 | MS.gene055088:CDS | 45.0% | |
AACGGCCTCAAACACTACTT+AGG | + | chr7.4:38320066-38320085 | MS.gene055088:CDS | 45.0% | |
AAGCCCTCATCTGCATATGT+TGG | - | chr7.4:38319293-38319312 | None:intergenic | 45.0% | |
AAGGGCTTACCATCTGAAGA+GGG | + | chr7.4:38319362-38319381 | MS.gene055088:CDS | 45.0% | |
AAGTTCTGTATGCTGAGGCT+GGG | + | chr7.4:38318590-38318609 | MS.gene055088:CDS | 45.0% | |
ACTGAACATCGATGACACAC+CGG | + | chr7.4:38318837-38318856 | MS.gene055088:CDS | 45.0% | |
AGGGACTATTGCAAGACTAG+TGG | + | chr7.4:38318657-38318676 | MS.gene055088:CDS | 45.0% | |
AGTATGTTACCTGTGACGAC+TGG | + | chr7.4:38318863-38318882 | MS.gene055088:CDS | 45.0% | |
ATCTGCTTACCCTCTTCAGA+TGG | - | chr7.4:38319374-38319393 | None:intergenic | 45.0% | |
CAAAGCGTGCAAGATCTTGA+TGG | + | chr7.4:38318733-38318752 | MS.gene055088:CDS | 45.0% | |
CACAGGACCAACAACGATTA+TGG | + | chr7.4:38319793-38319812 | MS.gene055088:CDS | 45.0% | |
CCAAACTACCTACTACTGCT+TGG | - | chr7.4:38320384-38320403 | None:intergenic | 45.0% | |
CCAAGCAGTAGTAGGTAGTT+TGG | + | chr7.4:38320381-38320400 | MS.gene055088:intron | 45.0% | |
CTAGGTTTACTGCAGACGAA+TGG | + | chr7.4:38319057-38319076 | MS.gene055088:intron | 45.0% | |
GAAGAGAGTGACAGTCATGA+AGG | + | chr7.4:38321032-38321051 | MS.gene055088:intron | 45.0% | |
GACATATCCTCCAGAAACAG+GGG | - | chr7.4:38319774-38319793 | None:intergenic | 45.0% | |
GCCCTTTCCAATACCAATCT+TGG | - | chr7.4:38319348-38319367 | None:intergenic | 45.0% | |
GGGTATCAGAAATGCCTTTG+TGG | + | chr7.4:38318913-38318932 | MS.gene055088:CDS | 45.0% | |
GTGACATATCCTCCAGAAAC+AGG | - | chr7.4:38319776-38319795 | None:intergenic | 45.0% | |
TACTTCCAAAGAAGGTGGTG+AGG | + | chr7.4:38319724-38319743 | MS.gene055088:CDS | 45.0% | |
TAGCCCCCTAAAGAAGCAAA+AGG | + | chr7.4:38321190-38321209 | MS.gene055088:CDS | 45.0% | |
TCACAGGTAACATACTGCAC+CGG | - | chr7.4:38318859-38318878 | None:intergenic | 45.0% | |
TCTGACCGTAAACATCTCTC+TGG | - | chr7.4:38319581-38319600 | None:intergenic | 45.0% | |
! | AGGAAGTGTGTGAGTCTTGT+TGG | + | chr7.4:38318892-38318911 | MS.gene055088:CDS | 45.0% |
! | ATTGGCTTACCCTCTTCAGA+TGG | - | chr7.4:38319317-38319336 | None:intergenic | 45.0% |
! | GTTTCTGGAGGATATGTCAC+AGG | + | chr7.4:38319776-38319795 | MS.gene055088:CDS | 45.0% |
!! | GCTTCTTCAGGTTGCTAACT+GGG | - | chr7.4:38320856-38320875 | None:intergenic | 45.0% |
!! | GGAAGTGTGTGAGTCTTGTT+GGG | + | chr7.4:38318893-38318912 | MS.gene055088:CDS | 45.0% |
!! | GGAGTGTTGCAAATGCTAGA+AGG | + | chr7.4:38319500-38319519 | MS.gene055088:CDS | 45.0% |
!! | GTATCTATGGTGATGGTGCA+GGG | + | chr7.4:38319997-38320016 | MS.gene055088:intron | 45.0% |
!! | TCTAAGGGTAATGGGGAGTA+AGG | + | chr7.4:38320956-38320975 | MS.gene055088:intron | 45.0% |
!! | TGTATCTATGGTGATGGTGC+AGG | + | chr7.4:38319996-38320015 | MS.gene055088:intron | 45.0% |
!! | TGTGGAAGGTATTGTGACAG+TGG | + | chr7.4:38318931-38318950 | MS.gene055088:CDS | 45.0% |
!! | TTTCTCACTTTTCCTCTCGG+AGG | + | chr7.4:38319479-38319498 | MS.gene055088:CDS | 45.0% |
AAGCCAAGGAACTCCATGGA+AGG | + | chr7.4:38318796-38318815 | MS.gene055088:CDS | 50.0% | |
AATGAGTGCCCTTAAGGCGT+TGG | - | chr7.4:38320286-38320305 | None:intergenic | 50.0% | |
ACTCAAGCCAAGGAACTCCA+TGG | + | chr7.4:38318792-38318811 | MS.gene055088:CDS | 50.0% | |
ACTCCTGTCCAAGCAGTAGT+AGG | + | chr7.4:38320373-38320392 | MS.gene055088:intron | 50.0% | |
ATTGTCAAAGGAGCTGGGAC+AGG | - | chr7.4:38318962-38318981 | None:intergenic | 50.0% | |
ATTTGCAACACTCCTCCGAG+AGG | - | chr7.4:38319494-38319513 | None:intergenic | 50.0% | |
CAAGACCTCACCACCTTCTT+TGG | - | chr7.4:38319732-38319751 | None:intergenic | 50.0% | |
CAGAGGAGTCTTCGAGAACA+AGG | - | chr7.4:38319246-38319265 | None:intergenic | 50.0% | |
CCATGGAAGGTAGTTGTAGC+AGG | + | chr7.4:38318809-38318828 | MS.gene055088:CDS | 50.0% | |
CCTCCAGAAACAGGGGATTT+GGG | - | chr7.4:38319767-38319786 | None:intergenic | 50.0% | |
CCTGCTACAACTACCTTCCA+TGG | - | chr7.4:38318812-38318831 | None:intergenic | 50.0% | |
CTACCTACTACTGCTTGGAC+AGG | - | chr7.4:38320379-38320398 | None:intergenic | 50.0% | |
CTACCTTCCATGGAGTTCCT+TGG | - | chr7.4:38318802-38318821 | None:intergenic | 50.0% | |
GAGGGCTTACCATCTGAAGA+GGG | + | chr7.4:38319305-38319324 | MS.gene055088:CDS | 50.0% | |
GATCCCAAATCCCCTGTTTC+TGG | + | chr7.4:38319761-38319780 | MS.gene055088:CDS | 50.0% | |
GATTATGGTGACAGACGAGC+TGG | + | chr7.4:38319808-38319827 | MS.gene055088:CDS | 50.0% | |
GGCAGGAAGTAGATCTGTTC+AGG | + | chr7.4:38321148-38321167 | MS.gene055088:intron | 50.0% | |
GGGTGTGTAATCTTGGTCAC+TGG | + | chr7.4:38321053-38321072 | MS.gene055088:intron | 50.0% | |
GGTCCCCCTAAATGACATTG+AGG | + | chr7.4:38319883-38319902 | MS.gene055088:CDS | 50.0% | |
TCCTCCAGAAACAGGGGATT+TGG | - | chr7.4:38319768-38319787 | None:intergenic | 50.0% | |
TGAGGGCTTACCATCTGAAG+AGG | + | chr7.4:38319304-38319323 | MS.gene055088:CDS | 50.0% | |
TGTCCCAGCTCCTTTGACAA+TGG | + | chr7.4:38318961-38318980 | MS.gene055088:CDS | 50.0% | |
! | AGAAGGAGGCATGCTTTCTC+TGG | + | chr7.4:38319127-38319146 | MS.gene055088:intron | 50.0% |
!! | GGCTTCTTCAGGTTGCTAAC+TGG | - | chr7.4:38320857-38320876 | None:intergenic | 50.0% |
CCTACACTTCCAGTCGTCAC+AGG | - | chr7.4:38318875-38318894 | None:intergenic | 55.0% | |
! | CCTGTGACGACTGGAAGTGT+AGG | + | chr7.4:38318872-38318891 | MS.gene055088:CDS | 55.0% |
!! | CCCAAATCCCCTGTTTCTGG+AGG | + | chr7.4:38319764-38319783 | MS.gene055088:CDS | 55.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr7.4 | gene | 38318541 | 38321223 | 38318541 | ID=MS.gene055088 |
chr7.4 | mRNA | 38318541 | 38321223 | 38318541 | ID=MS.gene055088.t1;Parent=MS.gene055088 |
chr7.4 | exon | 38318541 | 38319047 | 38318541 | ID=MS.gene055088.t1.exon1;Parent=MS.gene055088.t1 |
chr7.4 | CDS | 38318541 | 38319047 | 38318541 | ID=cds.MS.gene055088.t1;Parent=MS.gene055088.t1 |
chr7.4 | exon | 38319221 | 38319934 | 38319221 | ID=MS.gene055088.t1.exon2;Parent=MS.gene055088.t1 |
chr7.4 | CDS | 38319221 | 38319934 | 38319221 | ID=cds.MS.gene055088.t1;Parent=MS.gene055088.t1 |
chr7.4 | exon | 38320018 | 38320087 | 38320018 | ID=MS.gene055088.t1.exon3;Parent=MS.gene055088.t1 |
chr7.4 | CDS | 38320018 | 38320087 | 38320018 | ID=cds.MS.gene055088.t1;Parent=MS.gene055088.t1 |
chr7.4 | exon | 38321153 | 38321223 | 38321153 | ID=MS.gene055088.t1.exon4;Parent=MS.gene055088.t1 |
chr7.4 | CDS | 38321153 | 38321223 | 38321153 | ID=cds.MS.gene055088.t1;Parent=MS.gene055088.t1 |
Gene Sequence |
Protein sequence |