AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene055104

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene055104.t1 MTR_7g066310 63.027 403 107 6 9 369 4 406 1.86e-161 458
MS.gene055104.t1 MTR_7g066340 77.544 285 50 1 99 369 192 476 4.21e-154 442
MS.gene055104.t1 MTR_7g066340 80.645 93 18 0 1 93 1 93 6.41e-41 150
MS.gene055104.t1 MTR_7g066340 29.386 228 119 6 166 354 8 232 1.65e-14 75.1
MS.gene055104.t1 MTR_7g066280 63.582 335 36 3 99 369 101 413 1.07e-132 385
MS.gene055104.t1 MTR_7g066400 63.768 276 81 4 99 357 161 434 4.47e-114 339
MS.gene055104.t1 MTR_7g066400 50.538 93 30 1 1 93 1 77 3.44e-18 85.9
MS.gene055104.t1 MTR_1g041315 66.923 260 69 4 99 344 195 451 8.86e-113 337
MS.gene055104.t1 MTR_1g041315 62.069 87 33 0 7 93 9 95 4.51e-29 117
MS.gene055104.t1 MTR_7g066350 67.170 265 74 5 99 357 189 446 1.21e-109 328
MS.gene055104.t1 MTR_7g066350 73.118 93 22 1 1 93 1 90 1.89e-35 135
MS.gene055104.t1 MTR_7g066260 63.333 270 91 3 99 362 197 464 2.08e-108 327
MS.gene055104.t1 MTR_7g066260 69.318 88 27 0 6 93 9 96 6.44e-33 128
MS.gene055104.t1 MTR_2g029400 43.735 423 133 11 6 349 8 404 3.64e-96 292
MS.gene055104.t1 MTR_7g066570 51.667 300 102 5 99 364 194 484 5.25e-82 261
MS.gene055104.t1 MTR_7g066570 70.330 91 27 0 3 93 5 95 7.06e-33 129
MS.gene055104.t1 MTR_7g066360 54.779 272 104 5 99 363 193 452 2.65e-80 254
MS.gene055104.t1 MTR_7g066360 61.475 122 39 3 6 127 8 121 2.73e-34 132
MS.gene055104.t1 MTR_7g066290 56.226 265 87 4 99 361 197 434 7.54e-79 249
MS.gene055104.t1 MTR_7g066290 70.455 88 26 0 6 93 9 96 1.43e-32 127
MS.gene055104.t1 MTR_7g066580 48.875 311 105 9 93 360 142 441 1.26e-74 238
MS.gene055104.t1 MTR_7g066580 67.105 76 25 0 18 93 1 76 2.27e-27 112
MS.gene055104.t1 MTR_1g014060 41.457 398 169 12 21 369 9 391 6.60e-72 229
MS.gene055104.t1 MTR_7g066680 46.154 299 98 6 122 357 37 335 2.70e-71 226
MS.gene055104.t1 MTR_7g058710 47.826 299 114 7 99 360 184 477 1.03e-70 229
MS.gene055104.t1 MTR_7g058710 48.905 137 50 4 1 129 1 125 1.97e-28 115
MS.gene055104.t1 MTR_7g012680 51.145 262 113 4 121 369 193 452 4.45e-70 226
MS.gene055104.t1 MTR_7g012680 73.626 91 24 0 3 93 5 95 5.44e-37 139
MS.gene055104.t1 MTR_7g063920 34.459 444 193 11 1 360 1 430 4.15e-61 202
MS.gene055104.t1 MTR_7g063920 32.719 217 109 11 167 368 7 201 1.16e-15 78.2
MS.gene055104.t1 MTR_7g058700 49.580 238 79 4 123 360 725 921 7.82e-60 207
MS.gene055104.t1 MTR_7g058700 47.222 108 47 3 24 129 531 630 1.64e-16 81.6
MS.gene055104.t1 MTR_7g066430 40.065 307 138 7 102 368 190 490 1.56e-59 200
MS.gene055104.t1 MTR_7g066430 58.537 82 34 0 12 93 4 85 8.52e-25 105
MS.gene055104.t1 MTR_7g066490 39.922 258 121 5 112 367 189 414 1.34e-51 177
MS.gene055104.t1 MTR_7g066490 56.098 82 36 0 12 93 16 97 5.51e-20 90.9
MS.gene055104.t1 MTR_7g066490 28.972 214 114 7 168 354 14 216 1.64e-11 65.5
MS.gene055104.t1 MTR_7g066390 58.553 152 35 2 211 362 1 124 3.32e-49 163
MS.gene055104.t1 MTR_7g066410 36.991 319 131 9 105 360 201 512 6.97e-49 172
MS.gene055104.t1 MTR_7g066410 56.098 82 36 0 12 93 10 91 2.73e-23 101
MS.gene055104.t1 MTR_7g066480 37.313 268 132 5 102 367 195 428 2.11e-48 169
MS.gene055104.t1 MTR_7g066480 55.952 84 37 0 10 93 14 97 3.33e-20 91.7
MS.gene055104.t1 MTR_7g062280 34.247 292 154 7 99 360 202 485 1.34e-41 152
MS.gene055104.t1 MTR_7g062280 50.562 89 44 0 5 93 3 91 3.82e-19 89.0
MS.gene055104.t1 MTR_7g062280 41.250 80 41 2 15 93 269 343 5.57e-11 64.3
MS.gene055104.t1 MTR_4g019310 34.812 293 144 9 114 368 214 497 2.08e-41 152
MS.gene055104.t1 MTR_4g019310 42.857 98 44 2 6 93 2 97 4.50e-15 76.6
MS.gene055104.t1 MTR_7g062300 35.069 288 147 8 99 356 192 469 2.47e-41 151
MS.gene055104.t1 MTR_7g062300 50.538 93 46 0 1 93 1 93 3.42e-21 95.1
MS.gene055104.t1 MTR_7g062300 42.500 80 40 2 15 93 259 333 2.34e-11 65.5
MS.gene055104.t1 MTR_7g063720 39.252 214 117 2 160 360 13 226 7.36e-41 144
MS.gene055104.t1 MTR_7g063820 37.324 284 133 7 114 360 203 478 2.72e-40 149
MS.gene055104.t1 MTR_7g063820 53.933 89 39 2 6 93 3 90 1.02e-18 87.8
MS.gene055104.t1 MTR_7g100420 33.505 388 184 11 15 360 42 397 6.92e-40 146
MS.gene055104.t1 MTR_7g063830 37.643 263 123 5 114 360 201 438 6.31e-39 144
MS.gene055104.t1 MTR_7g063830 47.312 93 47 1 1 93 1 91 3.91e-19 88.6
MS.gene055104.t1 MTR_4g017440 33.657 309 156 8 102 368 207 508 5.78e-38 142
MS.gene055104.t1 MTR_4g017440 39.000 100 49 3 6 93 8 107 1.00e-11 66.6
MS.gene055104.t1 MTR_7g063670 36.154 260 146 5 114 360 199 451 1.08e-37 141
MS.gene055104.t1 MTR_7g063670 57.143 63 27 0 13 75 16 78 4.22e-14 73.6
MS.gene055104.t1 MTR_4g017830 34.122 296 135 8 117 360 214 501 1.24e-37 142
MS.gene055104.t1 MTR_4g017830 35.354 99 58 2 1 93 1 99 6.68e-11 63.9
MS.gene055104.t1 MTR_4g019340 36.029 272 142 8 102 348 237 501 2.11e-37 141
MS.gene055104.t1 MTR_4g019340 38.542 96 47 2 10 93 35 130 1.35e-11 66.2
MS.gene055104.t1 MTR_3g007740 35.294 272 135 7 114 360 187 442 4.07e-37 139
MS.gene055104.t1 MTR_3g007740 57.353 68 29 0 11 78 8 75 1.74e-16 80.9
MS.gene055104.t1 MTR_7g063880 33.000 300 156 10 99 369 188 471 1.56e-36 138
MS.gene055104.t1 MTR_7g063880 52.809 89 42 0 5 93 4 92 1.50e-20 93.2
MS.gene055104.t1 MTR_7g063880 27.039 233 137 7 169 369 10 241 3.83e-13 70.9
MS.gene055104.t1 MTR_7g063660 30.508 295 164 5 99 360 185 471 2.35e-36 137
MS.gene055104.t1 MTR_7g063660 49.000 100 51 0 7 106 4 103 1.24e-23 102
MS.gene055104.t1 MTR_7g063840 31.959 291 152 6 99 356 186 463 3.96e-36 137
MS.gene055104.t1 MTR_7g063840 52.688 93 42 1 1 93 1 91 1.72e-20 92.8
MS.gene055104.t1 MTR_7g063900 33.766 308 145 9 99 360 188 482 4.02e-33 129
MS.gene055104.t1 MTR_7g063900 56.180 89 39 0 5 93 3 91 1.81e-22 99.0
MS.gene055104.t1 MTR_7g063900 27.778 216 120 8 173 354 13 226 2.27e-16 80.9
MS.gene055104.t1 MTR_4g017470 30.294 340 177 9 75 364 145 474 8.39e-32 125
MS.gene055104.t1 MTR_4g017470 28.302 212 118 6 163 354 5 202 3.90e-15 77.0
MS.gene055104.t1 MTR_4g017470 33.981 103 58 1 1 93 1 103 4.88e-11 64.3
MS.gene055104.t1 MTR_7g063890 35.350 314 140 11 99 364 204 502 1.13e-31 125
MS.gene055104.t1 MTR_7g063890 54.217 83 38 0 11 93 26 108 1.31e-20 93.6
MS.gene055104.t1 MTR_7g063890 26.606 218 127 6 169 354 26 242 7.42e-15 76.3
MS.gene055104.t1 MTR_3g065200 33.459 266 105 8 114 347 183 408 3.50e-29 117
MS.gene055104.t1 MTR_3g065200 36.134 119 60 3 10 122 1 109 3.49e-12 67.8
MS.gene055104.t1 MTR_4g017410 32.028 281 151 9 117 366 219 490 2.24e-28 115
MS.gene055104.t1 MTR_4g017410 41.837 98 47 4 6 93 3 100 2.24e-13 71.6
MS.gene055104.t1 MTR_4g017610 30.556 288 157 7 100 357 202 476 4.78e-28 114
MS.gene055104.t1 MTR_4g017610 43.678 87 41 3 15 93 16 102 7.23e-13 70.1
MS.gene055104.t1 MTR_4g017550 30.693 303 127 11 117 358 191 471 1.12e-25 108
MS.gene055104.t1 MTR_7g063850 32.301 226 117 5 173 367 69 289 2.95e-25 103
MS.gene055104.t1 MTR_4g019330 32.275 189 92 5 184 368 32 188 5.92e-20 87.0
MS.gene055104.t1 MTR_8g445860 28.230 209 113 4 181 353 24 231 1.04e-19 87.4
MS.gene055104.t1 MTR_7g063690 30.986 213 116 6 13 197 13 222 2.24e-19 86.7
MS.gene055104.t1 MTR_0150s0010 28.125 224 121 4 169 353 9 231 2.67e-18 83.6
MS.gene055104.t1 MTR_0150s0010 38.710 93 50 2 1 93 1 86 7.80e-11 62.0
MS.gene055104.t1 MTR_2g067310 62.903 62 23 0 23 84 58 119 1.23e-17 81.6
MS.gene055104.t1 MTR_7g062270 46.914 81 43 0 13 93 11 91 2.36e-17 83.2
MS.gene055104.t1 MTR_4g019240 33.813 139 74 5 13 138 14 147 2.23e-14 71.2
MS.gene055104.t1 MTR_7g063760 48.485 66 33 1 296 360 2 67 4.44e-14 67.0
MS.gene055104.t1 MTR_8g023240 24.211 285 167 8 116 361 216 490 6.29e-14 73.6
MS.gene055104.t1 MTR_1g115450 36.957 92 53 1 7 98 2 88 1.71e-11 62.0
MS.gene055104.t1 MTR_1g115470 40.860 93 44 2 1 93 1 82 1.87e-11 65.5
MS.gene055104.t1 MTR_1g115440 39.785 93 50 2 1 93 1 87 2.88e-11 63.5
MS.gene055104.t1 MTR_1g115455 33.588 131 71 2 6 125 3 128 5.22e-11 62.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene055104.t1 AT5G01140 27.063 303 179 7 96 368 168 458 1.18e-25 108
MS.gene055104.t1 AT5G01120 28.223 287 169 7 105 356 201 485 3.60e-24 103
MS.gene055104.t1 AT5G01120 41.250 80 47 0 15 94 12 91 3.06e-14 74.3
MS.gene055104.t1 AT3G09140 30.508 295 174 9 102 368 209 500 4.29e-24 103
MS.gene055104.t1 AT3G09140 31.088 193 101 6 1 191 1 163 1.08e-15 78.6
MS.gene055104.t1 AT3G09140 30.282 284 169 8 113 368 246 528 1.32e-23 102
MS.gene055104.t1 AT3G09140 31.088 193 101 6 1 191 1 163 9.51e-16 79.0
MS.gene055104.t1 AT5G43240 28.571 315 173 9 102 368 57 367 4.77e-23 99.4
MS.gene055104.t1 AT5G43240 28.571 315 173 9 102 368 201 511 1.42e-22 99.4
MS.gene055104.t1 AT5G43240 40.506 79 47 0 15 93 12 90 2.20e-13 71.6
MS.gene055104.t1 AT5G43240 28.571 315 173 9 102 368 201 511 1.42e-22 99.4
MS.gene055104.t1 AT5G43240 40.506 79 47 0 15 93 12 90 2.20e-13 71.6
MS.gene055104.t1 AT5G43240 28.571 315 173 9 102 368 201 511 1.42e-22 99.4
MS.gene055104.t1 AT5G43240 40.506 79 47 0 15 93 12 90 2.20e-13 71.6
MS.gene055104.t1 AT5G01130 27.240 279 163 8 102 360 186 444 4.88e-21 94.4
MS.gene055104.t1 AT5G01130 34.146 123 74 2 1 119 1 120 1.90e-13 71.6
MS.gene055104.t1 AT5G01150 26.712 292 177 8 102 361 194 480 3.20e-19 89.4
MS.gene055104.t1 AT5G01150 37.815 119 66 2 12 130 9 119 3.06e-16 80.5
MS.gene055104.t1 AT5G37320 27.170 265 160 8 121 360 223 479 5.46e-17 82.4
MS.gene055104.t1 AT3G09110 43.478 92 51 1 12 102 9 100 3.89e-16 79.0
MS.gene055104.t1 AT3G09120 29.412 221 112 9 175 354 12 229 1.36e-12 68.2
MS.gene055104.t1 AT3G09120 42.169 83 47 1 11 93 5 86 3.18e-12 67.0

Find 70 sgRNAs with CRISPR-Local

Find 254 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCTTGCTTATGTTGATATTA+AGG 0.164334 7.4:-38597983 None:intergenic
TAGAGCACCATTAACGTTTA+TGG 0.174129 7.4:+38601215 MS.gene055104:CDS
CCTCCAGAAATAGGGGATTT+TGG 0.181844 7.4:-38601186 None:intergenic
GATCCAAAATCCCCTATTTC+TGG 0.204437 7.4:+38601183 MS.gene055104:CDS
CCGACCTCCGATCTGTTTCT+TGG 0.207965 7.4:-38600802 None:intergenic
CCATTTCCTCCACATCATTA+AGG 0.209295 7.4:-38601311 None:intergenic
CTAGCATATCCTCCAGAAAT+AGG 0.222209 7.4:-38601195 None:intergenic
TGAGCACCTGCTGTGTTTCT+TGG 0.233005 7.4:-38597653 None:intergenic
GTCAGACTTCATATTTAAAA+AGG 0.246204 7.4:+38600756 MS.gene055104:CDS
CAAAGTTATCATTAGAGTTT+TGG 0.270973 7.4:+38597404 MS.gene055104:CDS
TCTTCCTTATAATTGTTATA+AGG 0.277945 7.4:-38601138 None:intergenic
TAAATTATCAATGCAGCTTA+TGG 0.282491 7.4:-38600995 None:intergenic
TAATCTTCTCAAATTGTCTT+TGG 0.289830 7.4:+38600717 MS.gene055104:CDS
GATACCTTATAACAATTATA+AGG 0.355482 7.4:+38601134 MS.gene055104:CDS
TAGCATATCCTCCAGAAATA+GGG 0.363628 7.4:-38601194 None:intergenic
GAGGAAATGGTCATTAATAT+TGG 0.367390 7.4:+38601324 MS.gene055104:CDS
TATAAGGTATCGGTAATATC+TGG 0.373860 7.4:-38601122 None:intergenic
TATTCCCTATTACCTCCTTC+TGG 0.379109 7.4:-38601347 None:intergenic
AAATGCTTGGATTAGTTAGT+AGG 0.380859 7.4:-38601077 None:intergenic
GCTTCTTAACATTGCGCTTA+GGG 0.394593 7.4:+38597493 MS.gene055104:CDS
CATTTCCTCCACATCATTAA+GGG 0.397517 7.4:-38601310 None:intergenic
TCTGTCACCATAAACGTTAA+TGG 0.410819 7.4:-38601222 None:intergenic
TTTATATGGTTGCAGGGTCT+CGG 0.412461 7.4:+38601451 MS.gene055104:intron
CGACCTCCGATCTGTTTCTT+GGG 0.414289 7.4:-38600801 None:intergenic
AGCTTCTTAACATTGCGCTT+AGG 0.417921 7.4:+38597492 MS.gene055104:CDS
AATATTGAAGCACTGAGCTT+TGG 0.420564 7.4:+38597546 MS.gene055104:CDS
CCTTAATGATGTGGAGGAAA+TGG 0.422441 7.4:+38601311 MS.gene055104:CDS
TATGTATAAAATACCATCAA+TGG 0.430351 7.4:-38601271 None:intergenic
AAAGGAACAATGTGATGAAA+TGG 0.461572 7.4:+38600837 MS.gene055104:CDS
GGTCGGGATCGGTGAAGAAA+AGG 0.473742 7.4:+38600819 MS.gene055104:CDS
TTAAATATGAAGTCTGACAT+AGG 0.484007 7.4:-38600751 None:intergenic
CAAGAAACAGATCGGAGGTC+GGG 0.485070 7.4:+38600803 MS.gene055104:CDS
TTATAATTGTTATAAGGTAT+CGG 0.485993 7.4:-38601132 None:intergenic
AACAGATCGGAGGTCGGGAT+CGG 0.492134 7.4:+38600808 MS.gene055104:CDS
ACTCCAATGTCATCCATTGA+TGG 0.495461 7.4:+38601258 MS.gene055104:CDS
TCAGACTGCATGGAAATGCT+TGG 0.498154 7.4:-38601090 None:intergenic
TATCAACATAAGCAAGAAAG+AGG 0.508368 7.4:+38597989 MS.gene055104:CDS
GATCTTGTTTATTGAAGCAG+AGG 0.517035 7.4:+38600894 MS.gene055104:CDS
TTTCTCACCTTTCCCTTGGG+AGG 0.518315 7.4:+38600943 MS.gene055104:CDS
TTTATACATAGAAAGAATGA+AGG 0.527055 7.4:+38601284 MS.gene055104:CDS
TCTATTTGCTGAGGCAGAGA+AGG 0.537242 7.4:+38597449 MS.gene055104:CDS
TATGTACTGGTTGAGGCCGT+TGG 0.555448 7.4:-38601512 None:intergenic
TTAAATCTCCTCCAGAAGCA+TGG 0.561651 7.4:+38597927 MS.gene055104:intron
GTTCCTGAGTTCAGACTGCA+TGG 0.563810 7.4:-38601100 None:intergenic
CAACACTCCTCCCAAGGGAA+AGG 0.566939 7.4:-38600950 None:intergenic
AGCATATCCTCCAGAAATAG+GGG 0.573043 7.4:-38601193 None:intergenic
TCAACATCTGCTTTGACCAA+CGG 0.573453 7.4:+38601496 MS.gene055104:CDS
GGTCATTAATATTGGCCAGA+AGG 0.578280 7.4:+38601332 MS.gene055104:CDS
CATATGCAACACTCCTCCCA+AGG 0.586923 7.4:-38600956 None:intergenic
ATTTCCTCCACATCATTAAG+GGG 0.596639 7.4:-38601309 None:intergenic
ATACCATCAATGGATGACAT+TGG 0.597021 7.4:-38601261 None:intergenic
ACTAACCTATGTACTGGTTG+AGG 0.600521 7.4:-38601519 None:intergenic
AAATAAAGTTCTATTTGCTG+AGG 0.602370 7.4:+38597440 MS.gene055104:CDS
AGGGACCATTGCAAAACTTG+TGG 0.604088 7.4:+38597512 MS.gene055104:CDS
TTTAGACCCAAGAAACAGAT+CGG 0.608075 7.4:+38600795 MS.gene055104:CDS
TAGTGAACTAACCTATGTAC+TGG 0.608380 7.4:-38601525 None:intergenic
GTTTATGGTGACAGATGACT+TGG 0.612440 7.4:+38601230 MS.gene055104:CDS
TTTCCATGCAGTCTGAACTC+AGG 0.615979 7.4:+38601097 MS.gene055104:CDS
CCAAGAAACAGATCGGAGGT+CGG 0.621418 7.4:+38600802 MS.gene055104:CDS
CCAAAATCCCCTATTTCTGG+AGG 0.627577 7.4:+38601186 MS.gene055104:CDS
TATCATCCAAGAAACACAGC+AGG 0.629342 7.4:+38597647 MS.gene055104:CDS
CATTAATATTGGCCAGAAGG+AGG 0.629501 7.4:+38601335 MS.gene055104:CDS
AACGGCCTCAACCAGTACAT+AGG 0.634113 7.4:+38601514 MS.gene055104:CDS
GGCAGGAAGTGAGAAGCCAA+AGG 0.636977 7.4:+38601989 MS.gene055104:intron
GGAGTGTTGCATATGCTCGA+AGG 0.640903 7.4:+38600964 MS.gene055104:CDS
ATATGCAACACTCCTCCCAA+GGG 0.663884 7.4:-38600955 None:intergenic
GTTGGTCAAAGCAGATGTTG+AGG 0.676855 7.4:-38601494 None:intergenic
TTTCCTCCACATCATTAAGG+GGG 0.685271 7.4:-38601308 None:intergenic
TCTATGGTCACAGACATGCA+AGG 0.694458 7.4:+38597617 MS.gene055104:CDS
AGACCCAAGAAACAGATCGG+AGG 0.726967 7.4:+38600798 MS.gene055104:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATAATAATAATAATAATAA+GGG - chr7.4:38600645-38600664 None:intergenic 0.0%
!! TAATAATAATAATAATAATA+AGG - chr7.4:38600646-38600665 None:intergenic 0.0%
!! ATAAATTAACATATATGTAA+CGG + chr7.4:38600019-38600038 MS.gene055104:intron 10.0%
!! TAAAAGAATTAGTTATAAAT+TGG + chr7.4:38601715-38601734 MS.gene055104:intron 10.0%
!!! ACAAAAATTAACTTTAAAAT+AGG + chr7.4:38600510-38600529 MS.gene055104:intron 10.0%
!!! CAAAAATTAACTTTAAAATA+GGG + chr7.4:38600511-38600530 MS.gene055104:intron 10.0%
!!! TAATGATTGAAAATTTTATA+GGG - chr7.4:38600226-38600245 None:intergenic 10.0%
!! AAAACAATTATTTAGAAAAC+CGG - chr7.4:38598162-38598181 None:intergenic 15.0%
!! ACAATATTTGATTGTTTATA+TGG + chr7.4:38601437-38601456 MS.gene055104:intron 15.0%
!! TTATAATTGTTATAAGGTAT+CGG - chr7.4:38601135-38601154 None:intergenic 15.0%
!!! AAATTTTCAATCATTACTTT+TGG + chr7.4:38600230-38600249 MS.gene055104:intron 15.0%
!!! ATATGAGTTTACTTTAAAAT+AGG - chr7.4:38600258-38600277 None:intergenic 15.0%
!!! GTAATGATTGAAAATTTTAT+AGG - chr7.4:38600227-38600246 None:intergenic 15.0%
!!! TAGTGATTGAAAATTTTATA+GGG + chr7.4:38600542-38600561 MS.gene055104:intron 15.0%
!!! TATGAGTTTACTTTAAAATA+GGG - chr7.4:38600257-38600276 None:intergenic 15.0%
!!! TCTTTTGATCTTTTAATATA+TGG - chr7.4:38599007-38599026 None:intergenic 15.0%
!!! TTTGTTATCTTTTAAATGTT+TGG - chr7.4:38598756-38598775 None:intergenic 15.0%
!!! TTTTAATTACTCAATTTGAA+TGG - chr7.4:38601806-38601825 None:intergenic 15.0%
!! AAGAATTAGTTATAAATTGG+AGG + chr7.4:38601718-38601737 MS.gene055104:intron 20.0%
!! AGAAATGATTGTGATAATAT+TGG - chr7.4:38598671-38598690 None:intergenic 20.0%
!! AGGTAAAACTTCTATTTAAA+TGG + chr7.4:38599275-38599294 MS.gene055104:intron 20.0%
!! ATCTTGATGAAAAATATCTA+TGG + chr7.4:38597601-38597620 MS.gene055104:CDS 20.0%
!! ATGACATATTTGCATAATAT+TGG + chr7.4:38599764-38599783 MS.gene055104:intron 20.0%
!! ATGTAAAAATCTAACATCAA+CGG - chr7.4:38598399-38598418 None:intergenic 20.0%
!! GATACCTTATAACAATTATA+AGG + chr7.4:38601134-38601153 MS.gene055104:CDS 20.0%
!! GGTAAAACTTCTATTTAAAT+GGG + chr7.4:38599276-38599295 MS.gene055104:intron 20.0%
!! TAATAATAATCTATGAAGCA+CGG - chr7.4:38600123-38600142 None:intergenic 20.0%
!! TAGAAAAAGAAGAGAATTAA+AGG + chr7.4:38601833-38601852 MS.gene055104:intron 20.0%
!! TATGTATAAAATACCATCAA+TGG - chr7.4:38601274-38601293 None:intergenic 20.0%
!! TCTTCCTTATAATTGTTATA+AGG - chr7.4:38601141-38601160 None:intergenic 20.0%
!! TGCTTCATAGATTATTATTA+GGG + chr7.4:38600123-38600142 MS.gene055104:intron 20.0%
!! TTTATACATAGAAAGAATGA+AGG + chr7.4:38601284-38601303 MS.gene055104:CDS 20.0%
!!! AAATATGTCATTTATGCTTT+TGG - chr7.4:38599755-38599774 None:intergenic 20.0%
!!! AAATTTTCAATCACTACTTT+TGG - chr7.4:38600538-38600557 None:intergenic 20.0%
!!! AATATGTCATTTATGCTTTT+GGG - chr7.4:38599754-38599773 None:intergenic 20.0%
!!! AGTTTTTAAAGTTTAAACTC+TGG - chr7.4:38601745-38601764 None:intergenic 20.0%
!!! ATGTATCATGAAGTTTTTTT+TGG - chr7.4:38601556-38601575 None:intergenic 20.0%
!!! ATTTGTTTTAGATATTTGTC+TGG - chr7.4:38598258-38598277 None:intergenic 20.0%
!!! GAAAAGTTGGTATATTTATA+AGG - chr7.4:38600166-38600185 None:intergenic 20.0%
!!! GTAGTGATTGAAAATTTTAT+AGG + chr7.4:38600541-38600560 MS.gene055104:intron 20.0%
!!! TATATTTCATGTGTTAGTTT+AGG - chr7.4:38599831-38599850 None:intergenic 20.0%
!!! TTTGTTTTAGATATTTGTCT+GGG - chr7.4:38598257-38598276 None:intergenic 20.0%
! AAAAATTAACAAACGTGTCA+AGG + chr7.4:38598857-38598876 MS.gene055104:intron 25.0%
! AAAATTAACAAACGTGTCAA+GGG + chr7.4:38598858-38598877 MS.gene055104:intron 25.0%
! AACCGTAGATGAATTAATAA+AGG + chr7.4:38599870-38599889 MS.gene055104:intron 25.0%
! AATGCTTTCGAACATTTAAT+CGG - chr7.4:38598812-38598831 None:intergenic 25.0%
! AGATTTGCGAAATTGAAAAT+AGG + chr7.4:38597744-38597763 MS.gene055104:intron 25.0%
! AGCAAACTTTACTAATTTAG+TGG - chr7.4:38601775-38601794 None:intergenic 25.0%
! AGGAATCAAAAATGTATTTG+TGG + chr7.4:38597785-38597804 MS.gene055104:intron 25.0%
! ATATGTAACTCTTGTATCTA+TGG - chr7.4:38598306-38598325 None:intergenic 25.0%
! GACCTTTATTAATTCATCTA+CGG - chr7.4:38599875-38599894 None:intergenic 25.0%
! GATTTGCGAAATTGAAAATA+GGG + chr7.4:38597745-38597764 MS.gene055104:intron 25.0%
! GTCAGACTTCATATTTAAAA+AGG + chr7.4:38600756-38600775 MS.gene055104:CDS 25.0%
! GTGCTTCATAGATTATTATT+AGG + chr7.4:38600122-38600141 MS.gene055104:intron 25.0%
! TAAAAGATAACAAAGTCGAT+CGG + chr7.4:38598762-38598781 MS.gene055104:intron 25.0%
! TAAATTATCAATGCAGCTTA+TGG - chr7.4:38600998-38601017 None:intergenic 25.0%
! TAATCTTCTCAAATTGTCTT+TGG + chr7.4:38600717-38600736 MS.gene055104:CDS 25.0%
! TAGAAATAACGATATCACTT+TGG - chr7.4:38598710-38598729 None:intergenic 25.0%
! TCTTGCTTATGTTGATATTA+AGG - chr7.4:38597986-38598005 None:intergenic 25.0%
! TGATTATTATCTATGAAGCA+CGG + chr7.4:38598052-38598071 MS.gene055104:intron 25.0%
! TGTACATGCACATATAATAA+AGG - chr7.4:38601968-38601987 None:intergenic 25.0%
! TTAAATATGAAGTCTGACAT+AGG - chr7.4:38600754-38600773 None:intergenic 25.0%
! TTATTATATGTGCATGTACA+TGG + chr7.4:38601968-38601987 MS.gene055104:intron 25.0%
! TTCACAATAGTTCACATTAA+GGG + chr7.4:38598491-38598510 MS.gene055104:intron 25.0%
! TTTACACGTGAGTATAATAT+AGG + chr7.4:38598431-38598450 MS.gene055104:intron 25.0%
! TTTCACAATAGTTCACATTA+AGG + chr7.4:38598490-38598509 MS.gene055104:intron 25.0%
!! AAATAAAGTTCTATTTGCTG+AGG + chr7.4:38597440-38597459 MS.gene055104:CDS 25.0%
!! AAGTTGAAGGAAAATTTTAG+AGG + chr7.4:38600570-38600589 MS.gene055104:intron 25.0%
!! AGTTGAAGGAAAATTTTAGA+GGG + chr7.4:38600571-38600590 MS.gene055104:intron 25.0%
!! CAAAGTTATCATTAGAGTTT+TGG + chr7.4:38597404-38597423 MS.gene055104:CDS 25.0%
!! CTTAAATCTCTGATTTGAAT+AGG + chr7.4:38600690-38600709 MS.gene055104:intron 25.0%
!! TCAAAATCAGGAATTTTTCT+CGG - chr7.4:38597823-38597842 None:intergenic 25.0%
!!! CTGATTTTGAGTAAAGAAAT+CGG + chr7.4:38597833-38597852 MS.gene055104:intron 25.0%
!!! TCCTATGTTTTTTACATTAG+CGG + chr7.4:38600050-38600069 MS.gene055104:intron 25.0%
!!! TTGTTTTGCAAGATTATCTA+TGG - chr7.4:38599796-38599815 None:intergenic 25.0%
AAACACAAAACAAGTGGTTT+AGG - chr7.4:38599178-38599197 None:intergenic 30.0%
AAAGGAACAATGTGATGAAA+TGG + chr7.4:38600837-38600856 MS.gene055104:CDS 30.0%
AACTTGAAGAATTTCGCTAT+TGG - chr7.4:38599580-38599599 None:intergenic 30.0%
AATAGTTCACATTAAGGGTT+TGG + chr7.4:38598496-38598515 MS.gene055104:intron 30.0%
ACCGCTAATGTAAAAAACAT+AGG - chr7.4:38600054-38600073 None:intergenic 30.0%
AGGAAAAATGAATGATCGAA+AGG + chr7.4:38601853-38601872 MS.gene055104:intron 30.0%
ATAGTTCACATTAAGGGTTT+GGG + chr7.4:38598497-38598516 MS.gene055104:intron 30.0%
ATGTCTATGTAAACTATGCA+AGG + chr7.4:38599083-38599102 MS.gene055104:intron 30.0%
CAAAGAGATTCAAGATGATT+TGG - chr7.4:38598935-38598954 None:intergenic 30.0%
CAATGTTCAGTTTCATATTC+TGG - chr7.4:38597682-38597701 None:intergenic 30.0%
CGATTTCTTTACTCAAAATC+AGG - chr7.4:38597835-38597854 None:intergenic 30.0%
GAGGAAATGGTCATTAATAT+TGG + chr7.4:38601324-38601343 MS.gene055104:CDS 30.0%
TAACATATATGTAACGGTGT+CGG + chr7.4:38600025-38600044 MS.gene055104:intron 30.0%
TATCAACATAAGCAAGAAAG+AGG + chr7.4:38597989-38598008 MS.gene055104:CDS 30.0%
TATTTCGCTATTAGCGAAAT+TGG - chr7.4:38599312-38599331 None:intergenic 30.0%
TGATTGTTTATATGGTTGCA+GGG + chr7.4:38601445-38601464 MS.gene055104:intron 30.0%
TGTCTATGTAAACTATGCAA+GGG + chr7.4:38599084-38599103 MS.gene055104:intron 30.0%
TTATAGGGACTAAAAGTTGA+AGG + chr7.4:38600557-38600576 MS.gene055104:intron 30.0%
TTATAGGGACTAAAAGTTGA+AGG - chr7.4:38600576-38600557 None:intergenic 30.0%
TTGATGTCTCAATGAATCTA+GGG + chr7.4:38599141-38599160 MS.gene055104:intron 30.0%
TTGATTGTTTATATGGTTGC+AGG + chr7.4:38601444-38601463 MS.gene055104:intron 30.0%
TTTAGAGGGACTAAAACAAA+AGG + chr7.4:38600585-38600604 MS.gene055104:intron 30.0%
TTTCGAACATTTAATCGGTT+GGG - chr7.4:38598807-38598826 None:intergenic 30.0%
! AAGTTGAAGGAAAATTTTCG+AGG - chr7.4:38600198-38600217 None:intergenic 30.0%
! AGTTGAAGGAAAATTTTCGA+GGG - chr7.4:38600197-38600216 None:intergenic 30.0%
! TCAAATACTTTTCTCCAAGT+AGG + chr7.4:38601675-38601694 MS.gene055104:intron 30.0%
! TGTATTTTCCTGCACAAAAA+GGG + chr7.4:38599718-38599737 MS.gene055104:intron 30.0%
! TTGTATTTTCCTGCACAAAA+AGG + chr7.4:38599717-38599736 MS.gene055104:intron 30.0%
!! AAATGCTTGGATTAGTTAGT+AGG - chr7.4:38601080-38601099 None:intergenic 30.0%
!! AGTTATCATTAGAGTTTTGG+TGG + chr7.4:38597407-38597426 MS.gene055104:CDS 30.0%
!! CATGATACCAAGATTTTGAT+TGG + chr7.4:38601630-38601649 MS.gene055104:intron 30.0%
!! TATAAGGTATCGGTAATATC+TGG - chr7.4:38601125-38601144 None:intergenic 30.0%
!! TTAACTTGCGTAACAACATT+TGG - chr7.4:38597911-38597930 None:intergenic 30.0%
!!! TTTTTTGCATACTTAGAGAG+AGG - chr7.4:38599223-38599242 None:intergenic 30.0%
AATATAGGATCGTTTGCACA+GGG + chr7.4:38598446-38598465 MS.gene055104:intron 35.0%
AGAGAGAAACACAAAACAAG+TGG - chr7.4:38599184-38599203 None:intergenic 35.0%
AGATAGAACTATTTCGCTTG+CGG + chr7.4:38598579-38598598 MS.gene055104:intron 35.0%
AGCACAACCAATCAAAATCT+TGG - chr7.4:38601640-38601659 None:intergenic 35.0%
ATACCATCAATGGATGACAT+TGG - chr7.4:38601264-38601283 None:intergenic 35.0%
ATTTCCTCCACATCATTAAG+GGG - chr7.4:38601312-38601331 None:intergenic 35.0%
CATCTACTCTTGTAGTATTG+AGG - chr7.4:38599053-38599072 None:intergenic 35.0%
CATTTCCTCCACATCATTAA+GGG - chr7.4:38601313-38601332 None:intergenic 35.0%
CTAGATTCATTGAGACATCA+AGG - chr7.4:38599142-38599161 None:intergenic 35.0%
CTTGATGTCTCAATGAATCT+AGG + chr7.4:38599140-38599159 MS.gene055104:intron 35.0%
CTTTCGAACATTTAATCGGT+TGG - chr7.4:38598808-38598827 None:intergenic 35.0%
GAGGGACTAAAATGAAAAGT+TGG - chr7.4:38600179-38600198 None:intergenic 35.0%
TAATATAGGATCGTTTGCAC+AGG + chr7.4:38598445-38598464 MS.gene055104:intron 35.0%
TAGCATATCCTCCAGAAATA+GGG - chr7.4:38601197-38601216 None:intergenic 35.0%
TAGTGAACTAACCTATGTAC+TGG - chr7.4:38601528-38601547 None:intergenic 35.0%
TCTGTCACCATAAACGTTAA+TGG - chr7.4:38601225-38601244 None:intergenic 35.0%
TGAGCTCAGAAAAATGCTTA+AGG + chr7.4:38601037-38601056 MS.gene055104:CDS 35.0%
TGCACAAAAAGGGTAGAATA+AGG + chr7.4:38599728-38599747 MS.gene055104:intron 35.0%
TTTAGACCCAAGAAACAGAT+CGG + chr7.4:38600795-38600814 MS.gene055104:CDS 35.0%
! AAATTCTTCAAGTTTGCTCC+TGG + chr7.4:38599586-38599605 MS.gene055104:intron 35.0%
! ACTACGCTATTAGCGTATTT+TGG - chr7.4:38599425-38599444 None:intergenic 35.0%
! ATTAGCCACAAGTTTTGCAA+TGG - chr7.4:38597520-38597539 None:intergenic 35.0%
! CTACGCTATTAGCGTATTTT+GGG - chr7.4:38599424-38599443 None:intergenic 35.0%
! GATCTTGTTTATTGAAGCAG+AGG + chr7.4:38600894-38600913 MS.gene055104:CDS 35.0%
! TAGAAGTTTTACCTCTCTCT+TGG - chr7.4:38599269-38599288 None:intergenic 35.0%
! TAGAGCACCATTAACGTTTA+TGG + chr7.4:38601215-38601234 MS.gene055104:CDS 35.0%
! TTATTCTACCCTTTTTGTGC+AGG - chr7.4:38599729-38599748 None:intergenic 35.0%
!! AAGAGAAAAGAGTGTCACAA+AGG + chr7.4:38601880-38601899 MS.gene055104:intron 35.0%
!! AATATTGAAGCACTGAGCTT+TGG + chr7.4:38597546-38597565 MS.gene055104:CDS 35.0%
!! AGAGAAAAGAGTGTCACAAA+GGG + chr7.4:38601881-38601900 MS.gene055104:intron 35.0%
!!! TTTGTCTACTTGTTTTGCTG+AGG - chr7.4:38597388-38597407 None:intergenic 35.0%
AATAGCGTAGAATTCGCTGA+TGG + chr7.4:38599464-38599483 MS.gene055104:intron 40.0%
ACTCCAATGTCATCCATTGA+TGG + chr7.4:38601258-38601277 MS.gene055104:CDS 40.0%
ACTCTTGTATCTATGGTGTG+CGG - chr7.4:38598299-38598318 None:intergenic 40.0%
AGACATCAAGGATCTTGACA+TGG - chr7.4:38599130-38599149 None:intergenic 40.0%
AGCATATCCTCCAGAAATAG+GGG - chr7.4:38601196-38601215 None:intergenic 40.0%
AGCTTCTTAACATTGCGCTT+AGG + chr7.4:38597492-38597511 MS.gene055104:CDS 40.0%
AGTTATGCTATCAGCGTAAC+TGG - chr7.4:38599619-38599638 None:intergenic 40.0%
CATTAACCAGACTACCTACT+TGG - chr7.4:38601692-38601711 None:intergenic 40.0%
CATTAATATTGGCCAGAAGG+AGG + chr7.4:38601335-38601354 MS.gene055104:CDS 40.0%
CCATTTCCTCCACATCATTA+AGG - chr7.4:38601314-38601333 None:intergenic 40.0%
CCTTAATGATGTGGAGGAAA+TGG + chr7.4:38601311-38601330 MS.gene055104:CDS 40.0%
CTAGCATATCCTCCAGAAAT+AGG - chr7.4:38601198-38601217 None:intergenic 40.0%
CTATTAGCGTAAAAGCTCCA+GGG - chr7.4:38599449-38599468 None:intergenic 40.0%
GATCCAAAATCCCCTATTTC+TGG + chr7.4:38601183-38601202 MS.gene055104:CDS 40.0%
GCGAAAACTCATGAAGAACA+TGG - chr7.4:38599402-38599421 None:intergenic 40.0%
GCTTCTTAACATTGCGCTTA+GGG + chr7.4:38597493-38597512 MS.gene055104:CDS 40.0%
GGTCATTAATATTGGCCAGA+AGG + chr7.4:38601332-38601351 MS.gene055104:CDS 40.0%
GTAAACTATGCAAGGGATGA+AGG + chr7.4:38599091-38599110 MS.gene055104:intron 40.0%
GTTATGCTATCAGCGTAACT+GGG - chr7.4:38599618-38599637 None:intergenic 40.0%
GTTTATGGTGACAGATGACT+TGG + chr7.4:38601230-38601249 MS.gene055104:CDS 40.0%
TATATGTGCATGTACATGGC+AGG + chr7.4:38601972-38601991 MS.gene055104:intron 40.0%
TATCATCCAAGAAACACAGC+AGG + chr7.4:38597647-38597666 MS.gene055104:CDS 40.0%
TATGAGTGTTACACAGGTGT+CGG - chr7.4:38598217-38598236 None:intergenic 40.0%
TATTAGCGTAAAAGCTCCAG+GGG - chr7.4:38599448-38599467 None:intergenic 40.0%
TATTCCCTATTACCTCCTTC+TGG - chr7.4:38601350-38601369 None:intergenic 40.0%
TCAACATCTGCTTTGACCAA+CGG + chr7.4:38601496-38601515 MS.gene055104:CDS 40.0%
TGTGCAGGAAAATACAAGCA+AGG - chr7.4:38599714-38599733 None:intergenic 40.0%
TTAAATCTCCTCCAGAAGCA+TGG + chr7.4:38597927-38597946 MS.gene055104:intron 40.0%
TTATGCTATCAGCGTAACTG+GGG - chr7.4:38599617-38599636 None:intergenic 40.0%
TTTATATGGTTGCAGGGTCT+CGG + chr7.4:38601451-38601470 MS.gene055104:intron 40.0%
TTTCCTCCACATCATTAAGG+GGG - chr7.4:38601311-38601330 None:intergenic 40.0%
! AGTTTTCTCACCTTTCCCTT+GGG + chr7.4:38600940-38600959 MS.gene055104:CDS 40.0%
! TAGTTTTCTCACCTTTCCCT+TGG + chr7.4:38600939-38600958 MS.gene055104:CDS 40.0%
! TCACAAAGGGTGTGAAATCA+TGG + chr7.4:38601894-38601913 MS.gene055104:intron 40.0%
! TTTTCTCCAAGTAGGTAGTC+TGG + chr7.4:38601683-38601702 MS.gene055104:intron 40.0%
!! ACTAACCTATGTACTGGTTG+AGG - chr7.4:38601522-38601541 None:intergenic 40.0%
!! TTTTTACATTAGCGGTGTCG+CGG + chr7.4:38600058-38600077 MS.gene055104:intron 40.0%
ACGCTGATAGCATAACTCTC+TGG + chr7.4:38599622-38599641 MS.gene055104:intron 45.0%
AGCTCGTATGAGTGTTACAC+AGG - chr7.4:38598223-38598242 None:intergenic 45.0%
AGGGACCATTGCAAAACTTG+TGG + chr7.4:38597512-38597531 MS.gene055104:CDS 45.0%
ATATGCAACACTCCTCCCAA+GGG - chr7.4:38600958-38600977 None:intergenic 45.0%
ATGAAGCACGGATTCTGACA+CGG - chr7.4:38600111-38600130 None:intergenic 45.0%
ATTGGCCAGAAGGAGGTAAT+AGG + chr7.4:38601342-38601361 MS.gene055104:intron 45.0%
CAGTGAATAGTCCAAGAGAG+AGG + chr7.4:38599255-38599274 MS.gene055104:intron 45.0%
CGATATCACTTTGGACACGA+AGG - chr7.4:38598701-38598720 None:intergenic 45.0%
CTCATGAAGAACATGGCACA+AGG - chr7.4:38599395-38599414 None:intergenic 45.0%
GCTATTAGCGTAAAAGCTCC+AGG - chr7.4:38599450-38599469 None:intergenic 45.0%
GTTGGTCAAAGCAGATGTTG+AGG - chr7.4:38601497-38601516 None:intergenic 45.0%
TCAGACTGCATGGAAATGCT+TGG - chr7.4:38601093-38601112 None:intergenic 45.0%
TCGCTATTAGCGAAGCATGT+CGG + chr7.4:38599333-38599352 MS.gene055104:intron 45.0%
TCTATGGTCACAGACATGCA+AGG + chr7.4:38597617-38597636 MS.gene055104:CDS 45.0%
TTGGCCAGAAGGAGGTAATA+GGG + chr7.4:38601343-38601362 MS.gene055104:intron 45.0%
TTTCCATGCAGTCTGAACTC+AGG + chr7.4:38601097-38601116 MS.gene055104:CDS 45.0%
! CCTCCAGAAATAGGGGATTT+TGG - chr7.4:38601189-38601208 None:intergenic 45.0%
! GGGACTGTTCAAGTTTCTTC+AGG + chr7.4:38597765-38597784 MS.gene055104:intron 45.0%
! TCTATTTGCTGAGGCAGAGA+AGG + chr7.4:38597449-38597468 MS.gene055104:CDS 45.0%
!! CCAAAATCCCCTATTTCTGG+AGG + chr7.4:38601186-38601205 MS.gene055104:CDS 45.0%
!! TGTCATTGACTCCATGCTTC+TGG - chr7.4:38597941-38597960 None:intergenic 45.0%
!!! AAAAAATTCTAAATTTTTTT+GGG - chr7.4:38600342-38600361 None:intergenic 5.0%
!!! AAAAATTCTAATTTTTTTTT+TGG + chr7.4:38600436-38600455 MS.gene055104:intron 5.0%
!!! AAAATTCTAATTTTTTTTTT+GGG + chr7.4:38600437-38600456 MS.gene055104:intron 5.0%
!!! ATGAATTTTTATATTTTTTA+TGG + chr7.4:38600381-38600400 MS.gene055104:intron 5.0%
!!! TAAAAAATTCTAAATTTTTT+TGG - chr7.4:38600343-38600362 None:intergenic 5.0%
AACGGCCTCAACCAGTACAT+AGG + chr7.4:38601514-38601533 MS.gene055104:CDS 50.0%
ACAGAGGTAGTAGGACTGCA+AGG - chr7.4:38597717-38597736 None:intergenic 50.0%
AGACCCAAGAAACAGATCGG+AGG + chr7.4:38600798-38600817 MS.gene055104:CDS 50.0%
CAAGAAACAGATCGGAGGTC+GGG + chr7.4:38600803-38600822 MS.gene055104:CDS 50.0%
CATATGCAACACTCCTCCCA+AGG - chr7.4:38600959-38600978 None:intergenic 50.0%
CCAAGAAACAGATCGGAGGT+CGG + chr7.4:38600802-38600821 MS.gene055104:CDS 50.0%
CGCAAATCTCGTTCTCACAG+AGG - chr7.4:38597733-38597752 None:intergenic 50.0%
CTCGTTCTCACAGAGGTAGT+AGG - chr7.4:38597726-38597745 None:intergenic 50.0%
GAAGGTCCCCCTTAATGATG+TGG + chr7.4:38601302-38601321 MS.gene055104:CDS 50.0%
GAGATTGCTGCTGTTACGCT+TGG - chr7.4:38598618-38598637 None:intergenic 50.0%
GATGGCGACTTTCTTCAAGG+CGG + chr7.4:38599482-38599501 MS.gene055104:intron 50.0%
GTTACGCCATCAGCGAAATC+TGG - chr7.4:38599522-38599541 None:intergenic 50.0%
GTTCCTGAGTTCAGACTGCA+TGG - chr7.4:38601103-38601122 None:intergenic 50.0%
TATGAAGCACGGACACCTCT+AGG + chr7.4:38598063-38598082 MS.gene055104:intron 50.0%
TGAGCACCTGCTGTGTTTCT+TGG - chr7.4:38597656-38597675 None:intergenic 50.0%
TTCGCTCCAGATTTCGCTGA+TGG + chr7.4:38599513-38599532 MS.gene055104:intron 50.0%
TTTCTCACCTTTCCCTTGGG+AGG + chr7.4:38600943-38600962 MS.gene055104:CDS 50.0%
! ATGTGTCGTACGGGTGTCAT+AGG - chr7.4:38598133-38598152 None:intergenic 50.0%
! CGACCTCCGATCTGTTTCTT+GGG - chr7.4:38600804-38600823 None:intergenic 50.0%
! GCTGATGGCGACTTTCTTCA+AGG + chr7.4:38599479-38599498 MS.gene055104:intron 50.0%
!! AAGCATGTCGGCTTAAGTGG+TGG + chr7.4:38599345-38599364 MS.gene055104:intron 50.0%
!! CATTGACTCCATGCTTCTGG+AGG - chr7.4:38597938-38597957 None:intergenic 50.0%
!! GGAGTGTTGCATATGCTCGA+AGG + chr7.4:38600964-38600983 MS.gene055104:CDS 50.0%
!! TATGTACTGGTTGAGGCCGT+TGG - chr7.4:38601515-38601534 None:intergenic 50.0%
AACAGATCGGAGGTCGGGAT+CGG + chr7.4:38600808-38600827 MS.gene055104:CDS 55.0%
ACATGGCACAAGGACCAACG+TGG - chr7.4:38599385-38599404 None:intergenic 55.0%
ACGCTAATAGCGTAGTCCCC+TGG + chr7.4:38599429-38599448 MS.gene055104:intron 55.0%
CAACACTCCTCCCAAGGGAA+AGG - chr7.4:38600953-38600972 None:intergenic 55.0%
CCAACGTGGCATAACCCCAT+TGG - chr7.4:38599371-38599390 None:intergenic 55.0%
CCAATGGGGTTATGCCACGT+TGG + chr7.4:38599368-38599387 MS.gene055104:intron 55.0%
CCGTACGACACATGTCGAAC+CGG + chr7.4:38598140-38598159 MS.gene055104:intron 55.0%
CGGCTTAAGTGGTGGCCAAT+GGG + chr7.4:38599353-38599372 MS.gene055104:intron 55.0%
CGGTTCGACATGTGTCGTAC+GGG - chr7.4:38598142-38598161 None:intergenic 55.0%
GGCAGGAAGTGAGAAGCCAA+AGG + chr7.4:38601989-38602008 MS.gene055104:intron 55.0%
GGCTTAAGTGGTGGCCAATG+GGG + chr7.4:38599354-38599373 MS.gene055104:intron 55.0%
GGTCCCCCTTAATGATGTGG+AGG + chr7.4:38601305-38601324 MS.gene055104:CDS 55.0%
GGTCGGGATCGGTGAAGAAA+AGG + chr7.4:38600819-38600838 MS.gene055104:CDS 55.0%
GTCCATATCGTGTCGTGTCG+CGG + chr7.4:38600082-38600101 MS.gene055104:intron 55.0%
TCGGCTTAAGTGGTGGCCAA+TGG + chr7.4:38599352-38599371 MS.gene055104:intron 55.0%
! CCGACCTCCGATCTGTTTCT+TGG - chr7.4:38600805-38600824 None:intergenic 55.0%
! CCGGTTCGACATGTGTCGTA+CGG - chr7.4:38598143-38598162 None:intergenic 55.0%
! TCGCTGATGGCGTAACTGTC+TGG + chr7.4:38599526-38599545 MS.gene055104:intron 55.0%
!! AGGTGTCGGACATCGATCGT+AGG - chr7.4:38598203-38598222 None:intergenic 55.0%
!! GCGAAGCATGTCGGCTTAAG+TGG + chr7.4:38599342-38599361 MS.gene055104:intron 55.0%
AGCGACACGCCTAGTCCTAG+AGG - chr7.4:38598081-38598100 None:intergenic 60.0%
CACCGCGACACGACACGATA+TGG - chr7.4:38600087-38600106 None:intergenic 60.0%
CTATCAGCGTAACTGGGGCG+AGG - chr7.4:38599612-38599631 None:intergenic 60.0%
TGTCAGACACCGACGCGTGT+CGG - chr7.4:38598108-38598127 None:intergenic 60.0%
!! GCACGGACACCTCTAGGACT+AGG + chr7.4:38598069-38598088 MS.gene055104:intron 60.0%
TCGCTGTGTCCGACACGCGT+CGG + chr7.4:38598096-38598115 MS.gene055104:intron 65.0%
AGCGTAACTGGGGCGAGGCC+AGG - chr7.4:38599607-38599626 None:intergenic 70.0%


Chromosome Type Strat End Strand Name
chr7.4 gene 38597372 38602022 38597372 ID=MS.gene055104
chr7.4 mRNA 38597372 38602022 38597372 ID=MS.gene055104.t1;Parent=MS.gene055104
chr7.4 exon 38597372 38597668 38597372 ID=MS.gene055104.t1.exon1;Parent=MS.gene055104.t1
chr7.4 CDS 38597372 38597668 38597372 ID=cds.MS.gene055104.t1;Parent=MS.gene055104.t1
chr7.4 exon 38597942 38598010 38597942 ID=MS.gene055104.t1.exon2;Parent=MS.gene055104.t1
chr7.4 CDS 38597942 38598010 38597942 ID=cds.MS.gene055104.t1;Parent=MS.gene055104.t1
chr7.4 exon 38600712 38601356 38600712 ID=MS.gene055104.t1.exon3;Parent=MS.gene055104.t1
chr7.4 CDS 38600712 38601356 38600712 ID=cds.MS.gene055104.t1;Parent=MS.gene055104.t1
chr7.4 exon 38601466 38601535 38601466 ID=MS.gene055104.t1.exon4;Parent=MS.gene055104.t1
chr7.4 CDS 38601466 38601535 38601466 ID=cds.MS.gene055104.t1;Parent=MS.gene055104.t1
chr7.4 exon 38601994 38602022 38601994 ID=MS.gene055104.t1.exon5;Parent=MS.gene055104.t1
chr7.4 CDS 38601994 38602022 38601994 ID=cds.MS.gene055104.t1;Parent=MS.gene055104.t1
Gene Sequence

>MS.gene055104

ATGGCTGAAAATACCTCAGCAAAACAAGTAGACAAAGTTATCATTAGAGTTTTGGTGGACAAGAAGAAAAATAAAGTTCTATTTGCTGAGGCAGAGAAGGATTTTGTTGATGTTCTTTTGAGCTTCTTAACATTGCGCTTAGGGACCATTGCAAAACTTGTGGCTAATGACTCAAATATTGAAGCACTGAGCTTTGGCAGTATTAGTTCACTGTATCAAAGTGTGTCAGATCTTGATGAAAAATATCTATGGTCACAGACATGCAAGGAAATGCTTATCATCCAAGAAACACAGCAGGTGCTCATTGCCAGAATATGAAACTGAACATTGACAATACTGATACCTTGCAGTCCTACTACCTCTGTGAGAACGAGATTTGCGAAATTGAAAATAGGGACTGTTCAAGTTTCTTCAGGAATCAAAAATGTATTTGTGGAAAGCTGTTGAACCGAGAAAAATTCCTGATTTTGAGTAAAGAAATCGGTTTTGTTAATGAAACGTCGACGTTTATTGTATCTGATGATCTTTATGTTATGCCAAATGTTGTTACGCAAGTTAAATCTCCTCCAGAAGCATGGAGTCAATGACATTGATGCTATTGATAAACAAATCCTTAATATCAACATAAGCAAGAAAGAGGTATGTTTTCTTATTCTAAGTTTGTATGACATATTTTTTGTTGATTATTATCTATGAAGCACGGACACCTCTAGGACTAGGCGTGTCGCTGTGTCCGACACGCGTCGGTGTCTGACACTCCTATGACACCCGTACGACACATGTCGAACCGGTTTTCTAAATAATTGTTTTTTTCTTTACTTCGACACTCCTACGATCGATGTCCGACACCTGTGTAACACTCATACGAGCTGTGTCAGACAACCCAGACAAATATCTAAAACAAATTTTTTTTCTCTCTTGCTTCCGCACACCATAGATACAAGAGTTACATATCTTTAAGAAATGTTGATCAGTTATGAATTATAGACATTATAGTTGATTATATCATTTTTAGCTTTTTTGACCGTTGATGTTAGATTTTTACATGTCTAAAAACTATTTACACGTGAGTATAATATAGGATCGTTTGCACAGGGAGTTGCTTCAATCATAAGCGTTTTCACAATAGTTCACATTAAGGGTTTGGGTATAAGTTGTTTGTTTGTAAAACTATTTTTCTATTCGACAATAAAAATAAAACGAGAAGAGATAGAACTATTTCGCTTGCGGTTAGAGAAATCAACCAAGCGTAACAGCAGCAATCTCTCGATCAATTAACAGATTCTAGCTTTATAACCAATATTATCACAATCATTTCTACAATATCCTTCGTGTCCAAAGTGATATCGTTATTTCTAAAGTATCGTTTAAACATTCGTGTCCAAACATTTAAAAGATAACAAAGTCGATCGGATAACTTAATCGACGATTTCCCAACCGATTAAATGTTCGAAAGCATTAAGTTCTTGATTAAAAGCGATTATCAAAAATTAACAAACGTGTCAAGGGTGATAACATAAGATAGATTGTTATTCTAGTTCTAGATTCAAGAGTTCGTGTCCAAATCATCTTGAATCTCTTTGAAAGCATTAAAAGCAAGAATAACAACAATATTGAATCATTAAGCTAGAACCATATATTAAAAGATCAAAAGATTACATAATAGCTTGTTTGATTACCTCAATACTACAAGAGTAGATGATAGCTACACATGTCTATGTAAACTATGCAAGGGATGAAGGAAAGATGAAGATTCCATGTCAAGATCCTTGATGTCTCAATGAATCTAGGGTTGAATCTACTCCTAAACCACTTGTTTTGTGTTTCTCTCTCAAGAAATAGCTCTAACCTCTCTCTAAGTATGCAAAAAATATCTTATAAAACAGTGAATAGTCCAAGAGAGAGGTAAAACTTCTATTTAAATGGGCTGAGTTCAGCCAATTTCGCTAATAGCGAAATATTCGCTATTAGCGAAGCATGTCGGCTTAAGTGGTGGCCAATGGGGTTATGCCACGTTGGTCCTTGTGCCATGTTCTTCATGAGTTTTCGCCCAAAATACGCTAATAGCGTAGTCCCCTGGAGCTTTTACGCTAATAGCGTAGAATTCGCTGATGGCGACTTTCTTCAAGGCGGTTTAAGACTTCGCTCCAGATTTCGCTGATGGCGTAACTGTCTGGACTAATTTCGCTATTAGCGAAATATTCGCCAATAGCGAAATTCTTCAAGTTTGCTCCTGGCCTCGCCCCAGTTACGCTGATAGCATAACTCTCTGGAGAAATTTCGCTATCAGCGAAAAACTCGCTAATAACGAAATATTGTGAACTTTGACAATTCTTGCTCCTTGCTTGTATTTTCCTGCACAAAAAGGGTAGAATAAGGCCCAAAAGCATAAATGACATATTTGCATAATATTGGAGTTTTCCATAGATAATCTTGCAAAACAAGTCACTAAAATGCCTAAACTAACACATGAAATATATCACTTTTGAGCACTTATCAACCGTAGATGAATTAATAAAGGTCAAATACTATGATATCTTATTGTAGAACTTTTTCTAGTGACATAAATTGCTCAAGTTAGATGTGTATATATATATATATATATATATATATATGTATTTTAGTTTTCATTTTAGATCGTCTTTAAATAAATTAACATATATGTAACGGTGTCGGTGTCCTATGTTTTTTACATTAGCGGTGTCGCGGTGTCCATATCGTGTCGTGTCGCGGTGTCCGTGTCAGAATCCGTGCTTCATAGATTATTATTAGGGTTAAATATGTTTTTGATCCTTATAAATATACCAACTTTTCATTTTAGTCCCTCGAAAATTTTCCTTCAACTTTTAGTCCCTATAAAATTTTCAATCATTACTTTTGGTCCCTATTTTAAAGTAAACTCATATGTAGAATTTATATTTTTGAATCGAATTTTGCAGAAAAATTCATAATATTATAAGAATCTCTCCCAAAAAAATTTAGAATTTTTTAACAAAACATGAATTTAATATGAATTTTTATATTTTTTATGGTTAAATATTCATATTAAATTTATGTTTTGTTAAAAAATTCTAATTTTTTTTTTGGGAAAGATTTTTACAATATTCTACACATTTCTGCACAATTTCATTAAAAAATACAAAAATTAACTTTAAAATAGGGACCAAAAGTAGTGATTGAAAATTTTATAGGGACTAAAAGTTGAAGGAAAATTTTAGAGGGACTAAAACAAAAGGTTGATATATTTATAGAGAACAAAAACATATTTAACCCTTATTATTATTATTATTATTATTATTATTATTTCTCTCACTAATTCTTAAATCTCTGATTTGAATAGGTAGTTAATCTTCTCAAATTGTCTTTGGTATCAAAAACTCCTATGTCAGACTTCATATTTAAAAAGGAACAATTTGTTAGTAATTTAGACCCAAGAAACAGATCGGAGGTCGGGATCGGTGAAGAAAAGGAACAATGTGATGAAATGGTTGTAAAAGTAGTGAGAAGAAAATCAAATAAGCAGATCTTGTTTATTGAAGCAGAGGAAGATTTTGCTGATTTTGTTTTTAGTTTTCTCACCTTTCCCTTGGGAGGAGTGTTGCATATGCTCGAAGGATTCTCTTCCATAAGCTGCATTGATAATTTATATAAGAGTGTGACTGAATTGAGCTCAGAAAAATGCTTAAGGTCACAGTATTTCAAAAACCTACTAACTAATCCAAGCATTTCCATGCAGTCTGAACTCAGGAACCAGATATTACCGATACCTTATAACAATTATAAGGAAGAAAATATATCATATAAATTTGTTGATCCAAAATCCCCTATTTCTGGAGGATATGCTAGAGCACCATTAACGTTTATGGTGACAGATGACTTGGTTGTCACTCCAATGTCATCCATTGATGGTATTTTATACATAGAAAGAATGAAGGTCCCCCTTAATGATGTGGAGGAAATGGTCATTAATATTGGCCAGAAGGAGGTAATAGGGAATATGTTCATCTTCATATCACACAGTCTTTCATTTTAATATTTCTTGTATCATCATATTTGTAACAACTAACAATATTTGATTGTTTATATGGTTGCAGGGTCTCGGCATACTTAAAGCTTCACTGACCTCAACATCTGCTTTGACCAACGGCCTCAACCAGTACATAGGTTAGTTCACTATTCAACCAAAAAAAACTTCATGATACATTATCATTTGTAATTATCATAAAAACGATACTAAAGCTCATATAGAAATTGTTTACATGATACCAAGATTTTGATTGGTTGTGCTTGTATACACTTCAAATCAAATACTTTTCTCCAAGTAGGTAGTCTGGTTAATGAGTTAAAAGAATTAGTTATAAATTGGAGGTCCAGAGTTTAAACTTTAAAAACTAACATAACCACTAAATTAGTAAAGTTTGCTTAGAAAAACCATTCAAATTGAGTAATTAAAAATGAGCATAGAAAAAGAAGAGAATTAAAGGAAAAATGAATGATCGAAAGGTGAGAAGAGAAAAGAGTGTCACAAAGGGTGTGAAATCATGGTCACTTGCTTGTTATCATGTTAATAATTTTGAATATGTGCTAATTACTCCTTTATTATATGTGCATGTACATGGCAGGAAGTGAGAAGCCAAAGGTAGAAAAATGA
Protein sequence

>MS.gene055104.t1

MAENTSAKQVDKVIIRVLVDKKKNKVLFAEAEKDFVDVLLSFLTLRLGTIAKLVANDSNIEALSFGSISSLYQSVSDLDEKYLWSQTCKEMLIIQETQQKHGVNDIDAIDKQILNINISKKEVVNLLKLSLVSKTPMSDFIFKKEQFVSNLDPRNRSEVGIGEEKEQCDEMVVKVVRRKSNKQILFIEAEEDFADFVFSFLTFPLGGVLHMLEGFSSISCIDNLYKSVTELSSEKCLRSQYFKNLLTNPSISMQSELRNQILPIPYNNYKEENISYKFVDPKSPISGGYARAPLTFMVTDDLVVTPMSSIDGILYIERMKVPLNDVEEMVINIGQKEGLGILKASLTSTSALTNGLNQYIGSEKPKVEK