Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene94774.t1 | XP_013449064.1 | 76.6 | 478 | 109 | 2 | 1 | 477 | 1 | 476 | 2.00E-196 | 695.3 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene94774.t1 | A0A072U0X9 | 76.6 | 478 | 109 | 2 | 1 | 477 | 1 | 476 | 1.5e-196 | 695.3 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene94774.t1 | MTR_7g066340 | 76.569 | 478 | 109 | 2 | 1 | 477 | 1 | 476 | 0.0 | 730 |
MS.gene94774.t1 | MTR_7g066310 | 65.458 | 469 | 96 | 4 | 9 | 477 | 4 | 406 | 0.0 | 579 |
MS.gene94774.t1 | MTR_7g066310 | 28.947 | 228 | 121 | 8 | 8 | 233 | 189 | 377 | 3.55e-13 | 71.6 |
MS.gene94774.t1 | MTR_7g066350 | 66.667 | 459 | 138 | 8 | 1 | 454 | 1 | 449 | 0.0 | 576 |
MS.gene94774.t1 | MTR_7g066280 | 69.336 | 437 | 60 | 3 | 91 | 477 | 1 | 413 | 0.0 | 566 |
MS.gene94774.t1 | MTR_7g066280 | 27.203 | 261 | 133 | 8 | 8 | 233 | 146 | 384 | 1.66e-13 | 72.4 |
MS.gene94774.t1 | MTR_1g041315 | 64.365 | 449 | 137 | 8 | 7 | 438 | 9 | 451 | 0.0 | 561 |
MS.gene94774.t1 | MTR_7g066260 | 59.592 | 490 | 174 | 9 | 6 | 477 | 9 | 492 | 0.0 | 535 |
MS.gene94774.t1 | MTR_7g066400 | 57.749 | 471 | 148 | 8 | 1 | 454 | 1 | 437 | 1.40e-176 | 503 |
MS.gene94774.t1 | MTR_7g066570 | 56.148 | 488 | 166 | 9 | 3 | 454 | 5 | 480 | 3.67e-166 | 481 |
MS.gene94774.t1 | MTR_7g066360 | 55.102 | 490 | 182 | 12 | 6 | 476 | 8 | 478 | 7.18e-157 | 454 |
MS.gene94774.t1 | MTR_7g058710 | 49.698 | 497 | 187 | 12 | 1 | 454 | 1 | 477 | 6.41e-147 | 429 |
MS.gene94774.t1 | MTR_7g066290 | 54.923 | 457 | 168 | 9 | 6 | 455 | 9 | 434 | 6.97e-147 | 427 |
MS.gene94774.t1 | MTR_7g012680 | 52.542 | 472 | 177 | 10 | 3 | 456 | 5 | 447 | 1.12e-145 | 424 |
MS.gene94774.t1 | MTR_7g066580 | 46.311 | 488 | 164 | 12 | 18 | 454 | 1 | 441 | 4.25e-127 | 377 |
MS.gene94774.t1 | MTR_7g066580 | 28.516 | 256 | 138 | 10 | 4 | 235 | 207 | 441 | 5.07e-13 | 71.2 |
MS.gene94774.t1 | MTR_7g058700 | 48.889 | 450 | 152 | 11 | 24 | 454 | 531 | 921 | 4.24e-119 | 371 |
MS.gene94774.t1 | MTR_2g029400 | 44.915 | 472 | 149 | 10 | 6 | 442 | 8 | 403 | 5.47e-115 | 344 |
MS.gene94774.t1 | MTR_7g066430 | 40.816 | 490 | 235 | 10 | 12 | 454 | 4 | 485 | 2.62e-113 | 343 |
MS.gene94774.t1 | MTR_7g066410 | 39.608 | 510 | 232 | 14 | 13 | 454 | 11 | 512 | 2.88e-109 | 333 |
MS.gene94774.t1 | MTR_7g066410 | 28.512 | 242 | 134 | 8 | 12 | 233 | 284 | 506 | 6.28e-16 | 80.5 |
MS.gene94774.t1 | MTR_7g066480 | 40.175 | 458 | 213 | 12 | 11 | 456 | 15 | 423 | 2.56e-95 | 295 |
MS.gene94774.t1 | MTR_7g066480 | 27.803 | 223 | 119 | 8 | 262 | 448 | 14 | 230 | 4.27e-12 | 68.2 |
MS.gene94774.t1 | MTR_7g066490 | 40.611 | 458 | 205 | 13 | 12 | 461 | 16 | 414 | 2.83e-93 | 289 |
MS.gene94774.t1 | MTR_7g062300 | 37.474 | 483 | 255 | 13 | 1 | 450 | 1 | 469 | 1.97e-89 | 281 |
MS.gene94774.t1 | MTR_7g062280 | 36.417 | 508 | 246 | 15 | 1 | 454 | 1 | 485 | 2.08e-89 | 281 |
MS.gene94774.t1 | MTR_7g063660 | 36.008 | 486 | 247 | 15 | 11 | 454 | 8 | 471 | 6.62e-86 | 272 |
MS.gene94774.t1 | MTR_7g063820 | 37.931 | 493 | 252 | 14 | 1 | 454 | 1 | 478 | 1.02e-85 | 271 |
MS.gene94774.t1 | MTR_7g063880 | 36.810 | 489 | 254 | 16 | 5 | 461 | 4 | 469 | 1.86e-84 | 268 |
MS.gene94774.t1 | MTR_7g063900 | 38.569 | 503 | 239 | 17 | 1 | 454 | 1 | 482 | 5.85e-84 | 267 |
MS.gene94774.t1 | MTR_4g019310 | 35.088 | 513 | 257 | 16 | 6 | 460 | 2 | 496 | 4.68e-83 | 265 |
MS.gene94774.t1 | MTR_7g063830 | 36.129 | 465 | 253 | 12 | 5 | 454 | 3 | 438 | 1.27e-79 | 254 |
MS.gene94774.t1 | MTR_7g063840 | 35.597 | 486 | 254 | 15 | 1 | 450 | 1 | 463 | 1.08e-78 | 253 |
MS.gene94774.t1 | MTR_4g017440 | 34.247 | 511 | 258 | 14 | 6 | 454 | 8 | 502 | 1.55e-78 | 254 |
MS.gene94774.t1 | MTR_7g063890 | 37.805 | 492 | 239 | 13 | 11 | 454 | 26 | 498 | 3.18e-78 | 253 |
MS.gene94774.t1 | MTR_7g063920 | 35.654 | 474 | 234 | 10 | 5 | 454 | 4 | 430 | 9.70e-78 | 249 |
MS.gene94774.t1 | MTR_7g063920 | 30.841 | 214 | 110 | 10 | 261 | 458 | 7 | 198 | 7.12e-16 | 80.1 |
MS.gene94774.t1 | MTR_4g017830 | 33.019 | 530 | 272 | 17 | 1 | 465 | 1 | 512 | 3.67e-74 | 243 |
MS.gene94774.t1 | MTR_7g066680 | 47.492 | 299 | 94 | 5 | 216 | 451 | 37 | 335 | 6.20e-73 | 234 |
MS.gene94774.t1 | MTR_7g066680 | 29.204 | 226 | 137 | 9 | 2 | 219 | 77 | 287 | 1.53e-11 | 65.9 |
MS.gene94774.t1 | MTR_3g065200 | 35.269 | 465 | 211 | 13 | 10 | 441 | 1 | 408 | 7.62e-73 | 238 |
MS.gene94774.t1 | MTR_3g007740 | 35.332 | 467 | 247 | 14 | 11 | 454 | 8 | 442 | 7.69e-72 | 234 |
MS.gene94774.t1 | MTR_4g019340 | 34.091 | 484 | 255 | 14 | 10 | 444 | 35 | 503 | 2.47e-71 | 235 |
MS.gene94774.t1 | MTR_4g017610 | 33.602 | 497 | 260 | 18 | 2 | 451 | 3 | 476 | 5.88e-71 | 233 |
MS.gene94774.t1 | MTR_4g017410 | 33.206 | 524 | 271 | 20 | 6 | 476 | 3 | 500 | 6.53e-67 | 223 |
MS.gene94774.t1 | MTR_1g014060 | 52.000 | 225 | 100 | 5 | 21 | 243 | 9 | 227 | 4.06e-65 | 215 |
MS.gene94774.t1 | MTR_1g014060 | 48.571 | 175 | 76 | 3 | 294 | 454 | 210 | 384 | 7.38e-39 | 145 |
MS.gene94774.t1 | MTR_7g063670 | 34.110 | 472 | 253 | 14 | 8 | 454 | 13 | 451 | 2.66e-63 | 212 |
MS.gene94774.t1 | MTR_4g017470 | 30.056 | 539 | 261 | 15 | 1 | 476 | 1 | 486 | 4.97e-58 | 199 |
MS.gene94774.t1 | MTR_7g066390 | 57.595 | 158 | 39 | 1 | 305 | 462 | 1 | 130 | 4.75e-51 | 171 |
MS.gene94774.t1 | MTR_4g017550 | 30.271 | 479 | 244 | 20 | 39 | 452 | 18 | 471 | 4.09e-46 | 167 |
MS.gene94774.t1 | MTR_4g017550 | 27.311 | 238 | 130 | 8 | 12 | 228 | 247 | 462 | 2.44e-12 | 69.3 |
MS.gene94774.t1 | MTR_7g063720 | 38.785 | 214 | 118 | 3 | 254 | 454 | 13 | 226 | 4.61e-38 | 139 |
MS.gene94774.t1 | MTR_7g063720 | 28.879 | 232 | 136 | 9 | 3 | 233 | 17 | 220 | 5.63e-17 | 80.9 |
MS.gene94774.t1 | MTR_2g067310 | 42.857 | 175 | 58 | 4 | 23 | 197 | 58 | 190 | 1.33e-30 | 119 |
MS.gene94774.t1 | MTR_7g062270 | 38.587 | 184 | 88 | 6 | 13 | 185 | 11 | 180 | 1.22e-29 | 120 |
MS.gene94774.t1 | MTR_7g100420 | 33.231 | 325 | 160 | 10 | 166 | 454 | 94 | 397 | 3.72e-29 | 119 |
MS.gene94774.t1 | MTR_8g023240 | 23.185 | 496 | 306 | 12 | 1 | 455 | 29 | 490 | 4.21e-28 | 117 |
MS.gene94774.t1 | MTR_1g115440 | 31.727 | 249 | 148 | 7 | 1 | 238 | 1 | 238 | 1.25e-26 | 108 |
MS.gene94774.t1 | MTR_1g115440 | 29.778 | 225 | 118 | 4 | 263 | 448 | 10 | 233 | 1.68e-18 | 85.1 |
MS.gene94774.t1 | MTR_8g445860 | 30.242 | 248 | 147 | 8 | 4 | 239 | 5 | 238 | 1.85e-24 | 102 |
MS.gene94774.t1 | MTR_8g445860 | 30.415 | 217 | 114 | 6 | 267 | 447 | 16 | 231 | 2.02e-21 | 93.6 |
MS.gene94774.t1 | MTR_7g063850 | 31.982 | 222 | 109 | 6 | 267 | 454 | 69 | 282 | 2.42e-24 | 103 |
MS.gene94774.t1 | MTR_7g063850 | 23.887 | 247 | 151 | 8 | 15 | 246 | 69 | 293 | 1.71e-11 | 65.5 |
MS.gene94774.t1 | MTR_0150s0010 | 29.482 | 251 | 150 | 6 | 1 | 238 | 1 | 237 | 1.51e-21 | 94.0 |
MS.gene94774.t1 | MTR_0150s0010 | 28.889 | 225 | 120 | 3 | 262 | 447 | 8 | 231 | 4.56e-20 | 89.7 |
MS.gene94774.t1 | MTR_7g063690 | 28.269 | 283 | 126 | 7 | 13 | 291 | 13 | 222 | 1.70e-21 | 94.0 |
MS.gene94774.t1 | MTR_4g019330 | 33.898 | 177 | 83 | 4 | 278 | 450 | 32 | 178 | 5.11e-20 | 88.2 |
MS.gene94774.t1 | MTR_1g115455 | 26.295 | 251 | 148 | 9 | 6 | 239 | 3 | 233 | 9.54e-15 | 73.9 |
MS.gene94774.t1 | MTR_4g019240 | 34.677 | 124 | 65 | 5 | 3 | 116 | 4 | 121 | 3.96e-14 | 71.2 |
MS.gene94774.t1 | MTR_1g115450 | 36.842 | 95 | 55 | 1 | 7 | 101 | 2 | 91 | 4.00e-13 | 67.0 |
MS.gene94774.t1 | MTR_1g115470 | 39.362 | 94 | 52 | 1 | 12 | 105 | 6 | 94 | 4.53e-13 | 71.2 |
MS.gene94774.t1 | MTR_7g063760 | 46.970 | 66 | 34 | 1 | 390 | 454 | 2 | 67 | 2.17e-12 | 62.8 |
MS.gene94774.t1 | MTR_1g115435 | 24.681 | 235 | 147 | 7 | 7 | 239 | 2 | 208 | 7.03e-11 | 62.4 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene94774.t1 | AT3G09140 | 32.290 | 511 | 277 | 19 | 1 | 457 | 1 | 496 | 2.24e-60 | 206 |
MS.gene94774.t1 | AT5G01120 | 29.854 | 479 | 288 | 11 | 15 | 450 | 12 | 485 | 7.30e-58 | 199 |
MS.gene94774.t1 | AT3G09140 | 30.540 | 537 | 280 | 19 | 1 | 457 | 1 | 524 | 3.67e-56 | 195 |
MS.gene94774.t1 | AT5G43240 | 29.825 | 513 | 296 | 17 | 15 | 476 | 12 | 511 | 1.45e-55 | 193 |
MS.gene94774.t1 | AT5G43240 | 29.825 | 513 | 296 | 17 | 15 | 476 | 12 | 511 | 1.45e-55 | 193 |
MS.gene94774.t1 | AT5G43240 | 29.825 | 513 | 296 | 17 | 15 | 476 | 12 | 511 | 1.45e-55 | 193 |
MS.gene94774.t1 | AT5G01150 | 29.878 | 492 | 281 | 13 | 12 | 457 | 9 | 482 | 3.38e-55 | 192 |
MS.gene94774.t1 | AT5G01140 | 28.257 | 499 | 289 | 12 | 12 | 476 | 9 | 472 | 6.86e-52 | 182 |
MS.gene94774.t1 | AT5G01140 | 29.362 | 235 | 125 | 9 | 11 | 232 | 238 | 444 | 1.48e-13 | 73.2 |
MS.gene94774.t1 | AT5G01130 | 30.208 | 480 | 285 | 17 | 1 | 460 | 1 | 450 | 1.73e-50 | 178 |
MS.gene94774.t1 | AT3G09110 | 32.622 | 328 | 197 | 10 | 12 | 329 | 9 | 322 | 1.21e-48 | 171 |
MS.gene94774.t1 | AT3G09120 | 31.250 | 320 | 197 | 9 | 11 | 318 | 5 | 313 | 9.45e-40 | 146 |
MS.gene94774.t1 | AT5G37320 | 27.183 | 504 | 295 | 22 | 3 | 457 | 2 | 482 | 9.63e-37 | 141 |
MS.gene94774.t1 | AT5G43240 | 28.857 | 350 | 199 | 13 | 167 | 476 | 28 | 367 | 7.97e-28 | 114 |
Find 80 sgRNAs with CRISPR-Local
Find 237 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TCTTGCTTATGTTGATATTA+AGG | 0.164334 | 7.1:-36085725 | None:intergenic |
TAGAGCACCATTAACGTTTA+TGG | 0.174129 | 7.1:+36088443 | MS.gene94774:CDS |
CAATGTTCAGTTTCATATTC+TGG | 0.189480 | 7.1:-36085419 | None:intergenic |
GATCCTAAATCCCCTATTTC+TGG | 0.194829 | 7.1:+36088411 | MS.gene94774:CDS |
CCGACCTCCGATCTGTTTCT+TGG | 0.207965 | 7.1:-36088030 | None:intergenic |
GATTCCTTGTTACAATTATA+AGG | 0.220341 | 7.1:+36088362 | MS.gene94774:CDS |
CTAGCATATCCTCCAGAAAT+AGG | 0.222209 | 7.1:-36088423 | None:intergenic |
CCTCCAGAAATAGGGGATTT+AGG | 0.261981 | 7.1:-36088414 | None:intergenic |
CGGACTTTGAGAAAAGAAAT+TGG | 0.267457 | 7.1:+36085573 | MS.gene94774:CDS |
CAAAGTTATCATTAGAGTTT+TGG | 0.270973 | 7.1:+36085137 | MS.gene94774:CDS |
TAATCTTCTCAAATTGTCTT+TGG | 0.289830 | 7.1:+36087945 | MS.gene94774:CDS |
AAACTTGTTGTAACAACATT+TGG | 0.308352 | 7.1:-36085648 | None:intergenic |
TGTCATTGACTCCATGCTTC+TGG | 0.316064 | 7.1:-36085680 | None:intergenic |
CCGGCTGAGACTGAGTTTCT+TGG | 0.326408 | 7.1:-36085387 | None:intergenic |
AATACTGTGTAAGTTTCTTC+AGG | 0.340897 | 7.1:+36085505 | MS.gene94774:CDS |
TAGCATATCCTCCAGAAATA+GGG | 0.363628 | 7.1:-36088422 | None:intergenic |
GAGGAAATGGTCGTTAATAT+TGG | 0.365896 | 7.1:+36088552 | MS.gene94774:CDS |
TAAATTATCAATGCAGCTTA+AGG | 0.378298 | 7.1:-36088223 | None:intergenic |
AAATGCTTGGATTAGTTAGT+AGG | 0.380859 | 7.1:-36088305 | None:intergenic |
TTCTACCTTTGGCAACTTCA+AGG | 0.398271 | 7.1:-36089396 | None:intergenic |
AACAAGGAATCGGTAATATC+TGG | 0.406256 | 7.1:-36088350 | None:intergenic |
TCTGTCACCATAAACGTTAA+TGG | 0.410819 | 7.1:-36088450 | None:intergenic |
CGACCTCCGATCTGTTTCTT+GGG | 0.414289 | 7.1:-36088029 | None:intergenic |
AATATTGAAGCACTGAGCTT+TGG | 0.420564 | 7.1:+36085279 | MS.gene94774:CDS |
AGGGACCATTGCAAAATTTG+TGG | 0.425656 | 7.1:+36085245 | MS.gene94774:CDS |
AAGATATGAAATACCATCAA+TGG | 0.434003 | 7.1:-36088499 | None:intergenic |
GATGGCAAATTAACCTGATC+AGG | 0.436131 | 7.1:-36089362 | None:intergenic |
TCAAAATATGCGTTGACAAA+CGG | 0.437688 | 7.1:+36088703 | MS.gene94774:CDS |
TCTACCTTTGGCAACTTCAA+GGG | 0.437834 | 7.1:-36089395 | None:intergenic |
ACTTAATGATGTGGAGGAAA+TGG | 0.448325 | 7.1:+36088539 | MS.gene94774:CDS |
TTCAAGGGGCTAGCATTAGA+TGG | 0.450685 | 7.1:-36089380 | None:intergenic |
TCTATTTGCTGAGGCAGATA+AGG | 0.457603 | 7.1:+36085182 | MS.gene94774:CDS |
AAAGGAACAATGTGATGAAA+TGG | 0.461572 | 7.1:+36088065 | MS.gene94774:CDS |
TTATAATTGTAACAAGGAAT+CGG | 0.466064 | 7.1:-36088360 | None:intergenic |
GGTCGGGATCGGTGAAGAAA+AGG | 0.473742 | 7.1:+36088047 | MS.gene94774:CDS |
GGCAGGAAGTAGACCTGATC+AGG | 0.473977 | 7.1:+36089349 | MS.gene94774:intron |
TTAAATATGAAGTCTGACAT+AGG | 0.484007 | 7.1:-36087979 | None:intergenic |
CAAGAAACAGATCGGAGGTC+GGG | 0.485070 | 7.1:+36088031 | MS.gene94774:CDS |
CATATTCTGGCAATGAGCAC+CGG | 0.485366 | 7.1:-36085406 | None:intergenic |
AACAGATCGGAGGTCGGGAT+CGG | 0.492134 | 7.1:+36088036 | MS.gene94774:CDS |
ATTTCCTCCACATCATTAAG+TGG | 0.492887 | 7.1:-36088537 | None:intergenic |
AGGAATCAGAAATGTATTTG+TGG | 0.496267 | 7.1:+36085525 | MS.gene94774:CDS |
TCAGACTGCATGGAAATGCT+TGG | 0.498154 | 7.1:-36088318 | None:intergenic |
ATAATTACTAACCTATGTAC+TGG | 0.506330 | 7.1:-36088732 | None:intergenic |
TATCAACATAAGCAAGAAAG+AGG | 0.508368 | 7.1:+36085731 | MS.gene94774:CDS |
TTTGTCTACTTGTTCTGCTG+AGG | 0.512309 | 7.1:-36085118 | None:intergenic |
GATCTTGTTTATTGAAGCAG+AGG | 0.517035 | 7.1:+36088122 | MS.gene94774:CDS |
TTTCTCACCTTTCCCTTGGG+AGG | 0.518315 | 7.1:+36088171 | MS.gene94774:CDS |
CTACCTTTGGCAACTTCAAG+GGG | 0.528263 | 7.1:-36089394 | None:intergenic |
ACTCCAATGTCATCCATTGA+TGG | 0.546893 | 7.1:+36088486 | MS.gene94774:CDS |
ATGACATTGGAGTCACAACC+AGG | 0.561281 | 7.1:-36088476 | None:intergenic |
TTAAATCTCCTCCAGAAGCA+TGG | 0.561651 | 7.1:+36085669 | MS.gene94774:CDS |
CAACACTCCTCCCAAGGGAA+AGG | 0.566939 | 7.1:-36088178 | None:intergenic |
ACTAACCTATGTACTGGTTG+AGG | 0.571028 | 7.1:-36088726 | None:intergenic |
CCAAGAAACTCAGTCTCAGC+CGG | 0.572439 | 7.1:+36085387 | MS.gene94774:CDS |
AGCATATCCTCCAGAAATAG+GGG | 0.573043 | 7.1:-36088421 | None:intergenic |
CATATGCAACACTCCTCCCA+AGG | 0.586923 | 7.1:-36088184 | None:intergenic |
CTCGTCATCACAGCGGTAGT+AGG | 0.599159 | 7.1:-36085463 | None:intergenic |
GTTCGTGAGTTCAGACTGCA+TGG | 0.601730 | 7.1:-36088328 | None:intergenic |
AAATAAAGTTCTATTTGCTG+AGG | 0.602370 | 7.1:+36085173 | MS.gene94774:CDS |
CGTTAATATTGGCCAGAAGG+AGG | 0.604404 | 7.1:+36088563 | MS.gene94774:CDS |
ATACCATCAATGGATGACAT+TGG | 0.606080 | 7.1:-36088489 | None:intergenic |
GGTCGTTAATATTGGCCAGA+AGG | 0.607810 | 7.1:+36088560 | MS.gene94774:CDS |
TTTAGACCCAAGAAACAGAT+CGG | 0.608075 | 7.1:+36088023 | MS.gene94774:CDS |
GAACGTCCCACTTAATGATG+TGG | 0.609331 | 7.1:+36088530 | MS.gene94774:CDS |
CATTGACTCCATGCTTCTGG+AGG | 0.619328 | 7.1:-36085677 | None:intergenic |
CGTCCCACTTAATGATGTGG+AGG | 0.619494 | 7.1:+36088533 | MS.gene94774:CDS |
CCAAGAAACAGATCGGAGGT+CGG | 0.621418 | 7.1:+36088030 | MS.gene94774:CDS |
TTTCCTCCACATCATTAAGT+GGG | 0.624477 | 7.1:-36088536 | None:intergenic |
ATTTCCTTATAATTGTAACA+AGG | 0.626754 | 7.1:-36088366 | None:intergenic |
CCTAAATCCCCTATTTCTGG+AGG | 0.628731 | 7.1:+36088414 | MS.gene94774:CDS |
AACGGCCTCAACCAGTACAT+AGG | 0.634113 | 7.1:+36088721 | MS.gene94774:CDS |
GGAGTGTTGCATATGCTCGA+AGG | 0.640903 | 7.1:+36088192 | MS.gene94774:CDS |
ACAGCGGTAGTAGGACTGCA+AGG | 0.662142 | 7.1:-36085454 | None:intergenic |
TAGCCCCTTGAAGTTGCCAA+AGG | 0.663517 | 7.1:+36089391 | MS.gene94774:CDS |
ATATGCAACACTCCTCCCAA+GGG | 0.663884 | 7.1:-36088183 | None:intergenic |
GTTTATGGTGACAGATGACC+TGG | 0.700701 | 7.1:+36088458 | MS.gene94774:CDS |
TCTATGGTCACAGACATGCA+AGG | 0.703516 | 7.1:+36085350 | MS.gene94774:CDS |
AGACCCAAGAAACAGATCGG+AGG | 0.726967 | 7.1:+36088026 | MS.gene94774:CDS |
TGCAAGTCTCGTCATCACAG+CGG | 0.731505 | 7.1:-36085470 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AAAGAAAAAAACAATTATTT+AGG | - | chr7.1:36085911-36085930 | None:intergenic | 10.0% |
!! | ATAAATTAACATATATGTAA+CGG | + | chr7.1:36087740-36087759 | MS.gene94774:intron | 10.0% |
!! | ATTTGTTTATAAAACCATTA+AGG | + | chr7.1:36089021-36089040 | MS.gene94774:intron | 15.0% |
!!! | TCTTTTGATCTTTTAATATA+TGG | - | chr7.1:36086750-36086769 | None:intergenic | 15.0% |
!!! | TTTGTTATCTTTTAAATGTT+TGG | - | chr7.1:36086499-36086518 | None:intergenic | 15.0% |
!! | AAAACAATTATTTAGGAAAC+CGG | - | chr7.1:36085904-36085923 | None:intergenic | 20.0% |
!! | AAACAAGAGTTAAATATGTT+TGG | - | chr7.1:36088906-36088925 | None:intergenic | 20.0% |
!! | AGAAATGATTGTGATAATAT+TGG | - | chr7.1:36086414-36086433 | None:intergenic | 20.0% |
!! | AGGTAAAACTTCTATTTAAA+TGG | + | chr7.1:36087018-36087037 | MS.gene94774:intron | 20.0% |
!! | ATCTTGATGAAAAATATCTA+TGG | + | chr7.1:36085334-36085353 | MS.gene94774:CDS | 20.0% |
!! | ATGACATATTTGCATAATAT+TGG | + | chr7.1:36087507-36087526 | MS.gene94774:intron | 20.0% |
!! | ATGTAAAAATCTTACATCAA+CGG | - | chr7.1:36086142-36086161 | None:intergenic | 20.0% |
!! | ATTTCCTTATAATTGTAACA+AGG | - | chr7.1:36088369-36088388 | None:intergenic | 20.0% |
!! | CAAATATGTAAGTGAATTAA+TGG | - | chr7.1:36089006-36089025 | None:intergenic | 20.0% |
!! | GGTAAAACTTCTATTTAAAT+GGG | + | chr7.1:36087019-36087038 | MS.gene94774:intron | 20.0% |
!! | TAATAATAATCTATGATGCA+CGG | - | chr7.1:36087844-36087863 | None:intergenic | 20.0% |
!! | TAGAAAAAGAAAAGAAGTAA+AGG | + | chr7.1:36089187-36089206 | MS.gene94774:intron | 20.0% |
!! | TCAATATGAAAATAGTATGA+AGG | - | chr7.1:36088960-36088979 | None:intergenic | 20.0% |
!! | TTATAATTGTAACAAGGAAT+CGG | - | chr7.1:36088363-36088382 | None:intergenic | 20.0% |
!!! | AAATATGTCATTTATGCTTT+TGG | - | chr7.1:36087498-36087517 | None:intergenic | 20.0% |
!!! | AATATGTCATTTATGCTTTT+GGG | - | chr7.1:36087497-36087516 | None:intergenic | 20.0% |
!!! | ATTTGTTTTAGATATTTGTC+TGG | - | chr7.1:36086000-36086019 | None:intergenic | 20.0% |
!!! | TATATTTCATGTGTTAGTTT+AGG | - | chr7.1:36087574-36087593 | None:intergenic | 20.0% |
!!! | TTTGTTTTAGATATTTGTCT+GGG | - | chr7.1:36085999-36086018 | None:intergenic | 20.0% |
! | AACCGTAGATGAATTAATAA+AGG | + | chr7.1:36087613-36087632 | MS.gene94774:intron | 25.0% |
! | AACTTGAAGAATTTCGTTAT+TGG | - | chr7.1:36087323-36087342 | None:intergenic | 25.0% |
! | AAGATATGAAATACCATCAA+TGG | - | chr7.1:36088502-36088521 | None:intergenic | 25.0% |
! | AATGCTTTCAGACATTTAAT+CGG | - | chr7.1:36086555-36086574 | None:intergenic | 25.0% |
! | ATAATTACTAACCTATGTAC+TGG | - | chr7.1:36088735-36088754 | None:intergenic | 25.0% |
! | ATATGTAACTCTTGTATCTA+TGG | - | chr7.1:36086048-36086067 | None:intergenic | 25.0% |
! | GACCTTTATTAATTCATCTA+CGG | - | chr7.1:36087618-36087637 | None:intergenic | 25.0% |
! | GAGTGATTAAAAATGAAAGT+TGG | + | chr7.1:36088866-36088885 | MS.gene94774:intron | 25.0% |
! | GATTCCTTGTTACAATTATA+AGG | + | chr7.1:36088362-36088381 | MS.gene94774:CDS | 25.0% |
! | TAAATTATCAATGCAGCTTA+AGG | - | chr7.1:36088226-36088245 | None:intergenic | 25.0% |
! | TAATCTTCTCAAATTGTCTT+TGG | + | chr7.1:36087945-36087964 | MS.gene94774:CDS | 25.0% |
! | TAGAAATAACGATATCACTT+TGG | - | chr7.1:36086453-36086472 | None:intergenic | 25.0% |
! | TCTTGCTTATGTTGATATTA+AGG | - | chr7.1:36085728-36085747 | None:intergenic | 25.0% |
! | TGATTATTATCTATGAAGCA+CGG | + | chr7.1:36085794-36085813 | MS.gene94774:intron | 25.0% |
! | TGTACATGCACATATAATAA+AGG | - | chr7.1:36089328-36089347 | None:intergenic | 25.0% |
! | TGTTTATAAAACCATTAAGG+AGG | + | chr7.1:36089024-36089043 | MS.gene94774:intron | 25.0% |
! | TTAAATATGAAGTCTGACAT+AGG | - | chr7.1:36087982-36088001 | None:intergenic | 25.0% |
! | TTATAGAGACTAAACTTTGA+TGG | + | chr7.1:36088835-36088854 | MS.gene94774:intron | 25.0% |
! | TTATTATATGTGCATGTACA+TGG | + | chr7.1:36089328-36089347 | MS.gene94774:intron | 25.0% |
! | TTCACAATAGTTCACATTAA+GGG | + | chr7.1:36086234-36086253 | MS.gene94774:intron | 25.0% |
! | TTCCTTGAAAATGTAATGAA+AGG | + | chr7.1:36089081-36089100 | MS.gene94774:intron | 25.0% |
! | TTTACACGTGAGTATAATAT+AGG | + | chr7.1:36086174-36086193 | MS.gene94774:intron | 25.0% |
! | TTTCACAATAGTTCACATTA+AGG | + | chr7.1:36086233-36086252 | MS.gene94774:intron | 25.0% |
!! | AAATAAAGTTCTATTTGCTG+AGG | + | chr7.1:36085173-36085192 | MS.gene94774:CDS | 25.0% |
!! | CAAAGTTATCATTAGAGTTT+TGG | + | chr7.1:36085137-36085156 | MS.gene94774:CDS | 25.0% |
!! | CTTAAATCTCTGATTTGAAT+AGG | + | chr7.1:36087918-36087937 | MS.gene94774:intron | 25.0% |
!! | TGAACTTTTGCTAAAAAGAA+AGG | + | chr7.1:36088790-36088809 | MS.gene94774:intron | 25.0% |
!!! | AAACTTGTTGTAACAACATT+TGG | - | chr7.1:36085651-36085670 | None:intergenic | 25.0% |
!!! | ATGAAAGTTGGTATATTTAG+TGG | + | chr7.1:36088878-36088897 | MS.gene94774:intron | 25.0% |
!!! | TCCTATGTTTTTTACATTAG+CGG | + | chr7.1:36087771-36087790 | MS.gene94774:intron | 25.0% |
!!! | TGAAAGTTGGTATATTTAGT+GGG | + | chr7.1:36088879-36088898 | MS.gene94774:intron | 25.0% |
!!! | TTGTTTTGCAAGATTATCTA+TGG | - | chr7.1:36087539-36087558 | None:intergenic | 25.0% |
AAAGATTAACAAACGTGTCA+AGG | + | chr7.1:36086600-36086619 | MS.gene94774:intron | 30.0% | |
AAAGGAACAATGTGATGAAA+TGG | + | chr7.1:36088065-36088084 | MS.gene94774:CDS | 30.0% | |
AAGATTAACAAACGTGTCAA+GGG | + | chr7.1:36086601-36086620 | MS.gene94774:intron | 30.0% | |
AATACTGTGTAAGTTTCTTC+AGG | + | chr7.1:36085505-36085524 | MS.gene94774:CDS | 30.0% | |
AATAGTTCACATTAAGGGTT+TGG | + | chr7.1:36086239-36086258 | MS.gene94774:intron | 30.0% | |
ACCGCTAATGTAAAAAACAT+AGG | - | chr7.1:36087775-36087794 | None:intergenic | 30.0% | |
AGGAATCAGAAATGTATTTG+TGG | + | chr7.1:36085525-36085544 | MS.gene94774:CDS | 30.0% | |
ATAGTTCACATTAAGGGTTT+GGG | + | chr7.1:36086240-36086259 | MS.gene94774:intron | 30.0% | |
ATGTCTATGTAAACTATGCA+AGG | + | chr7.1:36086826-36086845 | MS.gene94774:intron | 30.0% | |
CAAAGAGATTCTAGATGATT+TGG | - | chr7.1:36086678-36086697 | None:intergenic | 30.0% | |
CAACCACAAGAAATCAAATA+TGG | - | chr7.1:36088650-36088669 | None:intergenic | 30.0% | |
CAATGTTCAGTTTCATATTC+TGG | - | chr7.1:36085422-36085441 | None:intergenic | 30.0% | |
CAGTAATTTATCCTCCTTAA+TGG | - | chr7.1:36089038-36089057 | None:intergenic | 30.0% | |
TAACATATATGTAACGGTGT+CGG | + | chr7.1:36087746-36087765 | MS.gene94774:intron | 30.0% | |
TATCAACATAAGCAAGAAAG+AGG | + | chr7.1:36085731-36085750 | MS.gene94774:CDS | 30.0% | |
TATTTCGCTATTAGCGAAAT+TGG | - | chr7.1:36087055-36087074 | None:intergenic | 30.0% | |
TCATATGAACATCCCATTTA+TGG | - | chr7.1:36089110-36089129 | None:intergenic | 30.0% | |
TGTCTATGTAAACTATGCAA+GGG | + | chr7.1:36086827-36086846 | MS.gene94774:intron | 30.0% | |
TTTCAGACATTTAATCGGTT+GGG | - | chr7.1:36086550-36086569 | None:intergenic | 30.0% | |
! | AATTTCTTTTCTCAAAGTCC+GGG | - | chr7.1:36085574-36085593 | None:intergenic | 30.0% |
! | AGCTTCTTAACATTTTGCTT+AGG | + | chr7.1:36085225-36085244 | MS.gene94774:CDS | 30.0% |
! | ATTAGCCACAAATTTTGCAA+TGG | - | chr7.1:36085253-36085272 | None:intergenic | 30.0% |
! | CAATTTCTTTTCTCAAAGTC+CGG | - | chr7.1:36085575-36085594 | None:intergenic | 30.0% |
! | GCTTCTTAACATTTTGCTTA+GGG | + | chr7.1:36085226-36085245 | MS.gene94774:CDS | 30.0% |
! | TCAAAATATGCGTTGACAAA+CGG | + | chr7.1:36088703-36088722 | MS.gene94774:CDS | 30.0% |
! | TCACCATATTTGATTTCTTG+TGG | + | chr7.1:36088644-36088663 | MS.gene94774:intron | 30.0% |
! | TGTATTTTCCTGCACAAAAA+GGG | + | chr7.1:36087461-36087480 | MS.gene94774:intron | 30.0% |
! | TTGTATTTTCCTGCACAAAA+AGG | + | chr7.1:36087460-36087479 | MS.gene94774:intron | 30.0% |
!! | AAATGCTTGGATTAGTTAGT+AGG | - | chr7.1:36088308-36088327 | None:intergenic | 30.0% |
!! | AGTTATCATTAGAGTTTTGG+TGG | + | chr7.1:36085140-36085159 | MS.gene94774:CDS | 30.0% |
AACAAGGAATCGGTAATATC+TGG | - | chr7.1:36088353-36088372 | None:intergenic | 35.0% | |
AATATAGGATCGTTTCCACA+GGG | + | chr7.1:36086189-36086208 | MS.gene94774:intron | 35.0% | |
ACTTAATGATGTGGAGGAAA+TGG | + | chr7.1:36088539-36088558 | MS.gene94774:CDS | 35.0% | |
AGATAGAACTATTTCGCTTG+CGG | + | chr7.1:36086322-36086341 | MS.gene94774:intron | 35.0% | |
AGGAAGAAAGAATGAACGAA+AGG | + | chr7.1:36089207-36089226 | MS.gene94774:intron | 35.0% | |
ATACCATCAATGGATGACAT+TGG | - | chr7.1:36088492-36088511 | None:intergenic | 35.0% | |
ATTTCCTCCACATCATTAAG+TGG | - | chr7.1:36088540-36088559 | None:intergenic | 35.0% | |
CATATGATCTAAGGGTAATG+AGG | + | chr7.1:36089123-36089142 | MS.gene94774:intron | 35.0% | |
CATCTACTCTTGTAGTATTG+AGG | - | chr7.1:36086796-36086815 | None:intergenic | 35.0% | |
CTTTCAGACATTTAATCGGT+TGG | - | chr7.1:36086551-36086570 | None:intergenic | 35.0% | |
GAGGAAATGGTCGTTAATAT+TGG | + | chr7.1:36088552-36088571 | MS.gene94774:CDS | 35.0% | |
GGGATGTTCATATGATCTAA+GGG | + | chr7.1:36089115-36089134 | MS.gene94774:intron | 35.0% | |
TAATATAGGATCGTTTCCAC+AGG | + | chr7.1:36086188-36086207 | MS.gene94774:intron | 35.0% | |
TAGCATATCCTCCAGAAATA+GGG | - | chr7.1:36088425-36088444 | None:intergenic | 35.0% | |
TCGATGTCTCAATGAATCTA+GGG | + | chr7.1:36086884-36086903 | MS.gene94774:intron | 35.0% | |
TCTGTCACCATAAACGTTAA+TGG | - | chr7.1:36088453-36088472 | None:intergenic | 35.0% | |
TGAGCACAGAAAAATGCTTA+AGG | + | chr7.1:36088265-36088284 | MS.gene94774:CDS | 35.0% | |
TGGGATGTTCATATGATCTA+AGG | + | chr7.1:36089114-36089133 | MS.gene94774:intron | 35.0% | |
TTTAGACCCAAGAAACAGAT+CGG | + | chr7.1:36088023-36088042 | MS.gene94774:CDS | 35.0% | |
TTTCCTCCACATCATTAAGT+GGG | - | chr7.1:36088539-36088558 | None:intergenic | 35.0% | |
! | AAATTCTTCAAGTTTGCTCC+TGG | + | chr7.1:36087329-36087348 | MS.gene94774:intron | 35.0% |
! | ATTTGATTTCTTGTGGTTGC+AGG | + | chr7.1:36088651-36088670 | MS.gene94774:intron | 35.0% |
! | CGGACTTTGAGAAAAGAAAT+TGG | + | chr7.1:36085573-36085592 | MS.gene94774:CDS | 35.0% |
! | GATCTTGTTTATTGAAGCAG+AGG | + | chr7.1:36088122-36088141 | MS.gene94774:CDS | 35.0% |
! | GTTTGTCAACGCATATTTTG+AGG | - | chr7.1:36088704-36088723 | None:intergenic | 35.0% |
! | TAGAAGTTTTACCTCTCTCT+TGG | - | chr7.1:36087012-36087031 | None:intergenic | 35.0% |
! | TAGAGCACCATTAACGTTTA+TGG | + | chr7.1:36088443-36088462 | MS.gene94774:CDS | 35.0% |
! | TTATTCTACCCTTTTTGTGC+AGG | - | chr7.1:36087472-36087491 | None:intergenic | 35.0% |
! | TTTGATTTCTTGTGGTTGCA+GGG | + | chr7.1:36088652-36088671 | MS.gene94774:intron | 35.0% |
! | TTTTCTGCATACTTAGAGAG+AGG | - | chr7.1:36086966-36086985 | None:intergenic | 35.0% |
!! | AATATTGAAGCACTGAGCTT+TGG | + | chr7.1:36085279-36085298 | MS.gene94774:CDS | 35.0% |
AAACACAAAGCAAGTGGTGT+AGG | - | chr7.1:36086921-36086940 | None:intergenic | 40.0% | |
AAAGAGAGTGAGAGTCATGA+AGG | + | chr7.1:36089238-36089257 | MS.gene94774:intron | 40.0% | |
AAGAGAGTGAGAGTCATGAA+GGG | + | chr7.1:36089239-36089258 | MS.gene94774:intron | 40.0% | |
AATAGCGTAGATTTCGCTGA+TGG | + | chr7.1:36087207-36087226 | MS.gene94774:intron | 40.0% | |
ACTACGCTATTAGCGTAGTT+TGG | - | chr7.1:36087168-36087187 | None:intergenic | 40.0% | |
ACTCCAATGTCATCCATTGA+TGG | + | chr7.1:36088486-36088505 | MS.gene94774:CDS | 40.0% | |
ACTCTTGTATCTATGGTGTG+CGG | - | chr7.1:36086041-36086060 | None:intergenic | 40.0% | |
AGAATGAACGAAAGGTGAGA+AGG | + | chr7.1:36089215-36089234 | MS.gene94774:intron | 40.0% | |
AGAGAGAAACACAAAGCAAG+TGG | - | chr7.1:36086927-36086946 | None:intergenic | 40.0% | |
AGCATATCCTCCAGAAATAG+GGG | - | chr7.1:36088424-36088443 | None:intergenic | 40.0% | |
AGGGACCATTGCAAAATTTG+TGG | + | chr7.1:36085245-36085264 | MS.gene94774:CDS | 40.0% | |
ATCTAAGGGTAATGAGGAGT+AGG | + | chr7.1:36089129-36089148 | MS.gene94774:intron | 40.0% | |
CGATATCACTTTGGACATGA+AGG | - | chr7.1:36086444-36086463 | None:intergenic | 40.0% | |
CTACGCTATTAGCGTAGTTT+GGG | - | chr7.1:36087167-36087186 | None:intergenic | 40.0% | |
CTAGATTCATTGAGACATCG+AGG | - | chr7.1:36086885-36086904 | None:intergenic | 40.0% | |
CTAGCATATCCTCCAGAAAT+AGG | - | chr7.1:36088426-36088445 | None:intergenic | 40.0% | |
CTATTAGCGTAAAAGCTCCA+GGG | - | chr7.1:36087192-36087211 | None:intergenic | 40.0% | |
CTCGATGTCTCAATGAATCT+AGG | + | chr7.1:36086883-36086902 | MS.gene94774:intron | 40.0% | |
GATCCTAAATCCCCTATTTC+TGG | + | chr7.1:36088411-36088430 | MS.gene94774:CDS | 40.0% | |
GATGGCAAATTAACCTGATC+AGG | - | chr7.1:36089365-36089384 | None:intergenic | 40.0% | |
GCGAAAACTCATGAAGAACA+GGG | - | chr7.1:36087145-36087164 | None:intergenic | 40.0% | |
GTAAACTATGCAAGGGATGA+AGG | + | chr7.1:36086834-36086853 | MS.gene94774:intron | 40.0% | |
TATATGTGCATGTACATGGC+AGG | + | chr7.1:36089332-36089351 | MS.gene94774:intron | 40.0% | |
TATTAGCGTAAAAGCTCCAG+GGG | - | chr7.1:36087191-36087210 | None:intergenic | 40.0% | |
TCTACCTTTGGCAACTTCAA+GGG | - | chr7.1:36089398-36089417 | None:intergenic | 40.0% | |
TGTGCAGGAAAATACAAGCA+AGG | - | chr7.1:36087457-36087476 | None:intergenic | 40.0% | |
TGTTGAACCGAGAAAAAACC+CGG | + | chr7.1:36085553-36085572 | MS.gene94774:CDS | 40.0% | |
TTAAATCTCCTCCAGAAGCA+TGG | + | chr7.1:36085669-36085688 | MS.gene94774:CDS | 40.0% | |
TTCTACCTTTGGCAACTTCA+AGG | - | chr7.1:36089399-36089418 | None:intergenic | 40.0% | |
TTTGTCTACTTGTTCTGCTG+AGG | - | chr7.1:36085121-36085140 | None:intergenic | 40.0% | |
! | AGTTTTCTCACCTTTCCCTT+GGG | + | chr7.1:36088168-36088187 | MS.gene94774:CDS | 40.0% |
! | TAGTTTTCTCACCTTTCCCT+TGG | + | chr7.1:36088167-36088186 | MS.gene94774:CDS | 40.0% |
! | TCTATTTGCTGAGGCAGATA+AGG | + | chr7.1:36085182-36085201 | MS.gene94774:CDS | 40.0% |
!! | ACTAACCTATGTACTGGTTG+AGG | - | chr7.1:36088729-36088748 | None:intergenic | 40.0% |
!! | TTTTTACATTAGCGGTGTCG+CGG | + | chr7.1:36087779-36087798 | MS.gene94774:intron | 40.0% |
!!! | TCAAAGTCCGGGTTTTTTCT+CGG | - | chr7.1:36085563-36085582 | None:intergenic | 40.0% |
AGCTCGTATGAGTGTTACAC+AGG | - | chr7.1:36085965-36085984 | None:intergenic | 45.0% | |
AGTTACGCTATCAGCGTAAC+TGG | - | chr7.1:36087362-36087381 | None:intergenic | 45.0% | |
ATATGCAACACTCCTCCCAA+GGG | - | chr7.1:36088186-36088205 | None:intergenic | 45.0% | |
ATGACATTGGAGTCACAACC+AGG | - | chr7.1:36088479-36088498 | None:intergenic | 45.0% | |
ATGATGCACGGATTCTGACA+CGG | - | chr7.1:36087832-36087851 | None:intergenic | 45.0% | |
ATGATTGAAGCAACTCCCTG+TGG | - | chr7.1:36086207-36086226 | None:intergenic | 45.0% | |
ATTGGCCAGAAGGAGGTAAA+AGG | + | chr7.1:36088570-36088589 | MS.gene94774:intron | 45.0% | |
CAGTGAATAGTCCAAGAGAG+AGG | + | chr7.1:36086998-36087017 | MS.gene94774:intron | 45.0% | |
CATATTCTGGCAATGAGCAC+CGG | - | chr7.1:36085409-36085428 | None:intergenic | 45.0% | |
CATTGAGACATCGAGGATCT+TGG | - | chr7.1:36086878-36086897 | None:intergenic | 45.0% | |
CCTCCAGAAATAGGGGATTT+AGG | - | chr7.1:36088417-36088436 | None:intergenic | 45.0% | |
CGTTAATATTGGCCAGAAGG+AGG | + | chr7.1:36088563-36088582 | MS.gene94774:CDS | 45.0% | |
CTACCTTTGGCAACTTCAAG+GGG | - | chr7.1:36089397-36089416 | None:intergenic | 45.0% | |
GAACGTCCCACTTAATGATG+TGG | + | chr7.1:36088530-36088549 | MS.gene94774:CDS | 45.0% | |
GCTATTAGCGTAAAAGCTCC+AGG | - | chr7.1:36087193-36087212 | None:intergenic | 45.0% | |
GGCGAAAACTCATGAAGAAC+AGG | - | chr7.1:36087146-36087165 | None:intergenic | 45.0% | |
GGTCGTTAATATTGGCCAGA+AGG | + | chr7.1:36088560-36088579 | MS.gene94774:CDS | 45.0% | |
GTTACGCTATCAGCGTAACT+GGG | - | chr7.1:36087361-36087380 | None:intergenic | 45.0% | |
GTTTATGGTGACAGATGACC+TGG | + | chr7.1:36088458-36088477 | MS.gene94774:CDS | 45.0% | |
TACTTCGACACTCCTACGAT+CGG | + | chr7.1:36085930-36085949 | MS.gene94774:intron | 45.0% | |
TCAGACTGCATGGAAATGCT+TGG | - | chr7.1:36088321-36088340 | None:intergenic | 45.0% | |
TCGCTATTAGCGAAGCATGT+CGG | + | chr7.1:36087076-36087095 | MS.gene94774:intron | 45.0% | |
TCTATGGTCACAGACATGCA+AGG | + | chr7.1:36085350-36085369 | MS.gene94774:CDS | 45.0% | |
TTACGCTATCAGCGTAACTG+GGG | - | chr7.1:36087360-36087379 | None:intergenic | 45.0% | |
TTGGCCAGAAGGAGGTAAAA+GGG | + | chr7.1:36088571-36088590 | MS.gene94774:intron | 45.0% | |
! | TTCAAGGGGCTAGCATTAGA+TGG | - | chr7.1:36089383-36089402 | None:intergenic | 45.0% |
!! | CCTAAATCCCCTATTTCTGG+AGG | + | chr7.1:36088414-36088433 | MS.gene94774:CDS | 45.0% |
!! | TGTCATTGACTCCATGCTTC+TGG | - | chr7.1:36085683-36085702 | None:intergenic | 45.0% |
AACGGCCTCAACCAGTACAT+AGG | + | chr7.1:36088721-36088740 | MS.gene94774:CDS | 50.0% | |
AGACCCAAGAAACAGATCGG+AGG | + | chr7.1:36088026-36088045 | MS.gene94774:CDS | 50.0% | |
CAAGAAACAGATCGGAGGTC+GGG | + | chr7.1:36088031-36088050 | MS.gene94774:CDS | 50.0% | |
CATATGCAACACTCCTCCCA+AGG | - | chr7.1:36088187-36088206 | None:intergenic | 50.0% | |
CCAAGAAACAGATCGGAGGT+CGG | + | chr7.1:36088030-36088049 | MS.gene94774:CDS | 50.0% | |
CCAAGAAACTCAGTCTCAGC+CGG | + | chr7.1:36085387-36085406 | MS.gene94774:CDS | 50.0% | |
CGTCCCACTTAATGATGTGG+AGG | + | chr7.1:36088533-36088552 | MS.gene94774:CDS | 50.0% | |
CTCATGAAGAACAGGGCACA+AGG | - | chr7.1:36087138-36087157 | None:intergenic | 50.0% | |
GAGATTGCTGCTGTTACGCT+TGG | - | chr7.1:36086361-36086380 | None:intergenic | 50.0% | |
GATGGCGACTTTCTTCAAGG+CGG | + | chr7.1:36087225-36087244 | MS.gene94774:intron | 50.0% | |
GTTACGCCATCAGCGAAATC+TGG | - | chr7.1:36087265-36087284 | None:intergenic | 50.0% | |
GTTCGTGAGTTCAGACTGCA+TGG | - | chr7.1:36088331-36088350 | None:intergenic | 50.0% | |
TAGCCCCTTGAAGTTGCCAA+AGG | + | chr7.1:36089391-36089410 | MS.gene94774:CDS | 50.0% | |
TATGAAGCACGGACACCTCT+AGG | + | chr7.1:36085805-36085824 | MS.gene94774:intron | 50.0% | |
TGCAAGTCTCGTCATCACAG+CGG | - | chr7.1:36085473-36085492 | None:intergenic | 50.0% | |
TTCGCTCCAGATTTCGCTGA+TGG | + | chr7.1:36087256-36087275 | MS.gene94774:intron | 50.0% | |
TTTCTCACCTTTCCCTTGGG+AGG | + | chr7.1:36088171-36088190 | MS.gene94774:CDS | 50.0% | |
! | ACGCTGATAGCGTAACTCTC+TGG | + | chr7.1:36087365-36087384 | MS.gene94774:intron | 50.0% |
! | ATGTGTCGTACGGGTGTCAT+AGG | - | chr7.1:36085875-36085894 | None:intergenic | 50.0% |
! | CACTCCCTTTTACCTCCTTC+TGG | - | chr7.1:36088578-36088597 | None:intergenic | 50.0% |
! | CGACCTCCGATCTGTTTCTT+GGG | - | chr7.1:36088032-36088051 | None:intergenic | 50.0% |
! | GCTGATGGCGACTTTCTTCA+AGG | + | chr7.1:36087222-36087241 | MS.gene94774:intron | 50.0% |
!! | AAGCATGTCGGCTTAAGTGG+TGG | + | chr7.1:36087088-36087107 | MS.gene94774:intron | 50.0% |
!! | CATTGACTCCATGCTTCTGG+AGG | - | chr7.1:36085680-36085699 | None:intergenic | 50.0% |
!! | GGAGTGTTGCATATGCTCGA+AGG | + | chr7.1:36088192-36088211 | MS.gene94774:CDS | 50.0% |
AACAGATCGGAGGTCGGGAT+CGG | + | chr7.1:36088036-36088055 | MS.gene94774:CDS | 55.0% | |
ACAGCGGTAGTAGGACTGCA+AGG | - | chr7.1:36085457-36085476 | None:intergenic | 55.0% | |
ACGCTAATAGCGTAGTCCCC+TGG | + | chr7.1:36087172-36087191 | MS.gene94774:intron | 55.0% | |
AGGTGTCAGACACCGATCGT+AGG | - | chr7.1:36085945-36085964 | None:intergenic | 55.0% | |
CAACACTCCTCCCAAGGGAA+AGG | - | chr7.1:36088181-36088200 | None:intergenic | 55.0% | |
CCAACGTGGCATAACCCCAT+TGG | - | chr7.1:36087114-36087133 | None:intergenic | 55.0% | |
CCAATGGGGTTATGCCACGT+TGG | + | chr7.1:36087111-36087130 | MS.gene94774:intron | 55.0% | |
CCGGCTGAGACTGAGTTTCT+TGG | - | chr7.1:36085390-36085409 | None:intergenic | 55.0% | |
CCGTACGACACATGTCGAAC+CGG | + | chr7.1:36085882-36085901 | MS.gene94774:intron | 55.0% | |
CGGCTTAAGTGGTGGCCAAT+GGG | + | chr7.1:36087096-36087115 | MS.gene94774:intron | 55.0% | |
CGGTTCGACATGTGTCGTAC+GGG | - | chr7.1:36085884-36085903 | None:intergenic | 55.0% | |
CTCGTCATCACAGCGGTAGT+AGG | - | chr7.1:36085466-36085485 | None:intergenic | 55.0% | |
GGCAGGAAGTAGACCTGATC+AGG | + | chr7.1:36089349-36089368 | MS.gene94774:intron | 55.0% | |
GGCTTAAGTGGTGGCCAATG+GGG | + | chr7.1:36087097-36087116 | MS.gene94774:intron | 55.0% | |
GGTCGGGATCGGTGAAGAAA+AGG | + | chr7.1:36088047-36088066 | MS.gene94774:CDS | 55.0% | |
TCGGCTTAAGTGGTGGCCAA+TGG | + | chr7.1:36087095-36087114 | MS.gene94774:intron | 55.0% | |
! | CCGACCTCCGATCTGTTTCT+TGG | - | chr7.1:36088033-36088052 | None:intergenic | 55.0% |
! | CCGGTTCGACATGTGTCGTA+CGG | - | chr7.1:36085885-36085904 | None:intergenic | 55.0% |
! | TCGCTGATGGCGTAACTGTC+TGG | + | chr7.1:36087269-36087288 | MS.gene94774:intron | 55.0% |
!! | GCGAAGCATGTCGGCTTAAG+TGG | + | chr7.1:36087085-36087104 | MS.gene94774:intron | 55.0% |
ACAGGGCACAAGGACCAACG+TGG | - | chr7.1:36087128-36087147 | None:intergenic | 60.0% | |
CACCGCGACACGACACGATA+CGG | - | chr7.1:36087808-36087827 | None:intergenic | 60.0% | |
CAGGACACGCCTAGTCCTAG+AGG | - | chr7.1:36085823-36085842 | None:intergenic | 60.0% | |
CTATCAGCGTAACTGGGGCG+AGG | - | chr7.1:36087355-36087374 | None:intergenic | 60.0% | |
GTCCGTATCGTGTCGTGTCG+CGG | + | chr7.1:36087803-36087822 | MS.gene94774:intron | 60.0% | |
TGTCAGACACCGACGCGTGT+CGG | - | chr7.1:36085850-36085869 | None:intergenic | 60.0% | |
!! | CTCTAGGACTAGGCGTGTCC+TGG | + | chr7.1:36085821-36085840 | MS.gene94774:intron | 60.0% |
!! | GCACGGACACCTCTAGGACT+AGG | + | chr7.1:36085811-36085830 | MS.gene94774:intron | 60.0% |
TCCTGGTGTCCGACACGCGT+CGG | + | chr7.1:36085838-36085857 | MS.gene94774:intron | 65.0% | |
ACCGACGCGTGTCGGACACC+AGG | - | chr7.1:36085842-36085861 | None:intergenic | 70.0% | |
AGCGTAACTGGGGCGAGGCC+AGG | - | chr7.1:36087350-36087369 | None:intergenic | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr7.1 | gene | 36085105 | 36089424 | 36085105 | ID=MS.gene94774 |
chr7.1 | mRNA | 36085105 | 36089424 | 36085105 | ID=MS.gene94774.t1;Parent=MS.gene94774 |
chr7.1 | exon | 36085105 | 36085752 | 36085105 | ID=MS.gene94774.t1.exon1;Parent=MS.gene94774.t1 |
chr7.1 | CDS | 36085105 | 36085752 | 36085105 | ID=cds.MS.gene94774.t1;Parent=MS.gene94774.t1 |
chr7.1 | exon | 36087940 | 36088584 | 36087940 | ID=MS.gene94774.t1.exon2;Parent=MS.gene94774.t1 |
chr7.1 | CDS | 36087940 | 36088584 | 36087940 | ID=cds.MS.gene94774.t1;Parent=MS.gene94774.t1 |
chr7.1 | exon | 36088673 | 36088742 | 36088673 | ID=MS.gene94774.t1.exon3;Parent=MS.gene94774.t1 |
chr7.1 | CDS | 36088673 | 36088742 | 36088673 | ID=cds.MS.gene94774.t1;Parent=MS.gene94774.t1 |
chr7.1 | exon | 36089354 | 36089424 | 36089354 | ID=MS.gene94774.t1.exon4;Parent=MS.gene94774.t1 |
chr7.1 | CDS | 36089354 | 36089424 | 36089354 | ID=cds.MS.gene94774.t1;Parent=MS.gene94774.t1 |
Gene Sequence |
Protein sequence |