Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene46007.t1 | XP_013449064.1 | 80.1 | 473 | 93 | 1 | 1 | 472 | 1 | 473 | 3.10E-204 | 721.5 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene46007.t1 | A0A072U0X9 | 80.1 | 473 | 93 | 1 | 1 | 472 | 1 | 473 | 2.2e-204 | 721.5 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene055098 | MS.gene46007 | 0.902199 | 1.24E-78 | -1.69E-46 |
PPI:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene46007.t1 | MTR_7g066340 | 80.127 | 473 | 93 | 1 | 1 | 472 | 1 | 473 | 0.0 | 761 |
MS.gene46007.t1 | MTR_7g066310 | 67.888 | 464 | 85 | 2 | 9 | 472 | 4 | 403 | 0.0 | 609 |
MS.gene46007.t1 | MTR_7g066350 | 63.597 | 467 | 150 | 8 | 1 | 456 | 1 | 458 | 0.0 | 559 |
MS.gene46007.t1 | MTR_7g066280 | 67.130 | 432 | 70 | 2 | 91 | 472 | 1 | 410 | 0.0 | 553 |
MS.gene46007.t1 | MTR_7g066260 | 58.487 | 489 | 179 | 10 | 6 | 476 | 9 | 491 | 0.0 | 526 |
MS.gene46007.t1 | MTR_1g041315 | 60.850 | 447 | 154 | 6 | 7 | 436 | 9 | 451 | 0.0 | 522 |
MS.gene46007.t1 | MTR_7g066570 | 54.175 | 515 | 188 | 10 | 3 | 481 | 5 | 507 | 3.07e-166 | 484 |
MS.gene46007.t1 | MTR_7g066400 | 54.797 | 469 | 157 | 8 | 1 | 449 | 1 | 434 | 2.54e-161 | 467 |
MS.gene46007.t1 | MTR_7g066360 | 52.767 | 506 | 193 | 11 | 6 | 498 | 8 | 480 | 9.25e-153 | 447 |
MS.gene46007.t1 | MTR_7g012680 | 52.854 | 473 | 180 | 9 | 3 | 458 | 5 | 451 | 4.79e-149 | 436 |
MS.gene46007.t1 | MTR_7g066290 | 55.773 | 459 | 159 | 11 | 6 | 453 | 9 | 434 | 1.21e-148 | 434 |
MS.gene46007.t1 | MTR_7g058710 | 50.710 | 493 | 186 | 10 | 1 | 452 | 1 | 477 | 5.36e-145 | 427 |
MS.gene46007.t1 | MTR_7g066580 | 46.545 | 492 | 167 | 11 | 18 | 458 | 1 | 447 | 1.79e-127 | 381 |
MS.gene46007.t1 | MTR_7g058700 | 47.875 | 447 | 159 | 7 | 24 | 452 | 531 | 921 | 3.56e-117 | 369 |
MS.gene46007.t1 | MTR_2g029400 | 45.319 | 470 | 148 | 10 | 6 | 440 | 8 | 403 | 1.22e-112 | 341 |
MS.gene46007.t1 | MTR_7g066430 | 40.984 | 488 | 235 | 8 | 12 | 452 | 4 | 485 | 1.93e-111 | 342 |
MS.gene46007.t1 | MTR_7g066430 | 28.511 | 235 | 147 | 7 | 9 | 231 | 254 | 479 | 1.10e-15 | 80.1 |
MS.gene46007.t1 | MTR_7g066410 | 40.079 | 509 | 231 | 11 | 12 | 452 | 10 | 512 | 9.11e-110 | 338 |
MS.gene46007.t1 | MTR_7g066480 | 39.207 | 454 | 221 | 8 | 11 | 454 | 15 | 423 | 4.05e-93 | 292 |
MS.gene46007.t1 | MTR_7g066490 | 39.821 | 447 | 212 | 9 | 12 | 454 | 16 | 409 | 7.23e-89 | 280 |
MS.gene46007.t1 | MTR_7g062280 | 36.308 | 493 | 259 | 10 | 5 | 452 | 3 | 485 | 5.37e-88 | 280 |
MS.gene46007.t1 | MTR_7g062300 | 36.875 | 480 | 264 | 11 | 1 | 450 | 1 | 471 | 6.92e-88 | 280 |
MS.gene46007.t1 | MTR_7g063660 | 35.787 | 489 | 250 | 12 | 7 | 452 | 4 | 471 | 6.98e-88 | 280 |
MS.gene46007.t1 | MTR_7g063820 | 37.374 | 495 | 244 | 13 | 5 | 452 | 3 | 478 | 2.36e-85 | 273 |
MS.gene46007.t1 | MTR_7g063900 | 39.918 | 486 | 234 | 14 | 12 | 452 | 10 | 482 | 6.33e-85 | 272 |
MS.gene46007.t1 | MTR_7g063900 | 27.049 | 244 | 139 | 9 | 265 | 471 | 13 | 254 | 5.23e-14 | 75.1 |
MS.gene46007.t1 | MTR_7g063880 | 36.777 | 484 | 247 | 14 | 5 | 453 | 4 | 463 | 1.77e-84 | 271 |
MS.gene46007.t1 | MTR_4g019310 | 35.211 | 497 | 256 | 12 | 6 | 448 | 2 | 486 | 8.82e-82 | 265 |
MS.gene46007.t1 | MTR_4g019310 | 29.310 | 232 | 143 | 10 | 13 | 234 | 267 | 487 | 9.81e-14 | 74.3 |
MS.gene46007.t1 | MTR_7g063830 | 36.617 | 467 | 252 | 10 | 1 | 452 | 1 | 438 | 1.31e-81 | 262 |
MS.gene46007.t1 | MTR_7g063890 | 39.050 | 484 | 242 | 11 | 11 | 452 | 26 | 498 | 5.36e-81 | 263 |
MS.gene46007.t1 | MTR_7g063840 | 35.551 | 481 | 267 | 11 | 1 | 452 | 1 | 467 | 7.91e-79 | 256 |
MS.gene46007.t1 | MTR_3g007740 | 37.500 | 464 | 239 | 12 | 11 | 452 | 8 | 442 | 1.59e-78 | 254 |
MS.gene46007.t1 | MTR_7g063920 | 35.282 | 479 | 234 | 10 | 1 | 452 | 1 | 430 | 3.17e-77 | 251 |
MS.gene46007.t1 | MTR_4g017830 | 33.017 | 527 | 274 | 14 | 1 | 463 | 1 | 512 | 3.86e-74 | 245 |
MS.gene46007.t1 | MTR_4g017440 | 32.941 | 510 | 264 | 14 | 6 | 452 | 8 | 502 | 1.83e-71 | 238 |
MS.gene46007.t1 | MTR_4g017440 | 25.758 | 264 | 144 | 7 | 257 | 473 | 9 | 267 | 3.49e-11 | 66.2 |
MS.gene46007.t1 | MTR_4g019340 | 34.382 | 477 | 254 | 11 | 13 | 442 | 39 | 503 | 1.06e-70 | 236 |
MS.gene46007.t1 | MTR_4g019340 | 26.047 | 215 | 144 | 4 | 12 | 226 | 303 | 502 | 3.29e-12 | 69.3 |
MS.gene46007.t1 | MTR_3g065200 | 34.409 | 465 | 213 | 12 | 10 | 439 | 1 | 408 | 1.17e-69 | 231 |
MS.gene46007.t1 | MTR_7g063670 | 35.385 | 455 | 260 | 10 | 13 | 452 | 16 | 451 | 5.12e-69 | 230 |
MS.gene46007.t1 | MTR_7g066680 | 46.488 | 299 | 97 | 6 | 214 | 449 | 37 | 335 | 8.81e-69 | 226 |
MS.gene46007.t1 | MTR_7g066680 | 25.472 | 212 | 142 | 7 | 6 | 210 | 80 | 282 | 5.32e-11 | 64.7 |
MS.gene46007.t1 | MTR_1g014060 | 53.636 | 220 | 94 | 4 | 21 | 237 | 9 | 223 | 3.38e-67 | 223 |
MS.gene46007.t1 | MTR_1g014060 | 41.589 | 214 | 104 | 5 | 259 | 458 | 184 | 390 | 4.17e-36 | 139 |
MS.gene46007.t1 | MTR_4g017610 | 33.403 | 479 | 257 | 15 | 15 | 449 | 16 | 476 | 5.86e-67 | 225 |
MS.gene46007.t1 | MTR_4g017610 | 26.471 | 238 | 133 | 6 | 255 | 450 | 6 | 243 | 3.95e-11 | 65.9 |
MS.gene46007.t1 | MTR_4g017410 | 33.065 | 496 | 269 | 16 | 6 | 452 | 3 | 484 | 2.27e-65 | 221 |
MS.gene46007.t1 | MTR_4g017470 | 29.767 | 514 | 255 | 11 | 1 | 452 | 1 | 470 | 5.62e-56 | 196 |
MS.gene46007.t1 | MTR_4g017470 | 28.216 | 241 | 142 | 7 | 255 | 477 | 5 | 232 | 5.45e-13 | 71.6 |
MS.gene46007.t1 | MTR_7g066390 | 56.329 | 158 | 41 | 1 | 303 | 460 | 1 | 130 | 5.66e-49 | 167 |
MS.gene46007.t1 | MTR_4g017550 | 30.252 | 476 | 242 | 19 | 41 | 450 | 20 | 471 | 1.47e-44 | 164 |
MS.gene46007.t1 | MTR_7g063720 | 37.619 | 210 | 118 | 3 | 256 | 452 | 17 | 226 | 1.99e-36 | 136 |
MS.gene46007.t1 | MTR_7g063720 | 29.310 | 232 | 133 | 10 | 3 | 231 | 17 | 220 | 2.76e-17 | 82.0 |
MS.gene46007.t1 | MTR_7g062270 | 37.356 | 174 | 108 | 1 | 13 | 186 | 11 | 183 | 1.39e-30 | 123 |
MS.gene46007.t1 | MTR_2g067310 | 42.775 | 173 | 59 | 6 | 23 | 195 | 58 | 190 | 1.22e-27 | 111 |
MS.gene46007.t1 | MTR_7g063690 | 32.014 | 278 | 120 | 9 | 13 | 289 | 13 | 222 | 2.57e-26 | 108 |
MS.gene46007.t1 | MTR_7g100420 | 35.165 | 273 | 134 | 8 | 214 | 452 | 134 | 397 | 4.76e-26 | 110 |
MS.gene46007.t1 | MTR_1g115440 | 33.465 | 254 | 135 | 10 | 1 | 236 | 1 | 238 | 6.98e-26 | 106 |
MS.gene46007.t1 | MTR_8g023240 | 24.845 | 483 | 291 | 12 | 13 | 453 | 38 | 490 | 9.80e-26 | 111 |
MS.gene46007.t1 | MTR_8g445860 | 29.918 | 244 | 151 | 6 | 4 | 237 | 5 | 238 | 6.80e-25 | 103 |
MS.gene46007.t1 | MTR_8g445860 | 28.378 | 222 | 122 | 5 | 260 | 445 | 11 | 231 | 1.45e-18 | 85.5 |
MS.gene46007.t1 | MTR_0150s0010 | 31.496 | 254 | 139 | 8 | 1 | 236 | 1 | 237 | 3.53e-22 | 96.3 |
MS.gene46007.t1 | MTR_4g019330 | 33.702 | 181 | 86 | 4 | 276 | 452 | 32 | 182 | 4.41e-19 | 85.9 |
MS.gene46007.t1 | MTR_1g115455 | 27.126 | 247 | 149 | 7 | 6 | 237 | 3 | 233 | 5.38e-15 | 75.1 |
MS.gene46007.t1 | MTR_1g115450 | 40.000 | 90 | 49 | 1 | 7 | 96 | 2 | 86 | 1.18e-14 | 71.6 |
MS.gene46007.t1 | MTR_4g019240 | 35.965 | 114 | 61 | 4 | 3 | 108 | 4 | 113 | 4.37e-14 | 71.2 |
MS.gene46007.t1 | MTR_1g115470 | 43.678 | 87 | 44 | 1 | 12 | 98 | 6 | 87 | 3.21e-13 | 72.4 |
MS.gene46007.t1 | MTR_0150s0030 | 38.462 | 91 | 50 | 2 | 6 | 95 | 2 | 87 | 1.01e-12 | 67.8 |
MS.gene46007.t1 | MTR_1g115435 | 27.236 | 246 | 142 | 9 | 7 | 245 | 2 | 217 | 2.40e-12 | 67.0 |
MS.gene46007.t1 | MTR_8g044880 | 38.144 | 97 | 54 | 2 | 6 | 101 | 2 | 93 | 2.56e-12 | 68.2 |
MS.gene46007.t1 | MTR_8g445920 | 41.111 | 90 | 46 | 2 | 1 | 90 | 1 | 83 | 7.11e-12 | 62.8 |
MS.gene46007.t1 | MTR_8g044890 | 41.111 | 90 | 46 | 2 | 1 | 90 | 1 | 83 | 7.11e-12 | 62.8 |
MS.gene46007.t1 | MTR_8g445910 | 39.560 | 91 | 49 | 2 | 6 | 95 | 2 | 87 | 8.81e-12 | 66.2 |
MS.gene46007.t1 | MTR_7g063850 | 24.675 | 231 | 137 | 9 | 15 | 231 | 69 | 276 | 1.64e-11 | 65.9 |
MS.gene46007.t1 | MTR_7g063760 | 43.939 | 66 | 36 | 1 | 388 | 452 | 2 | 67 | 7.26e-11 | 58.5 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene46007.t1 | AT3G09140 | 32.094 | 511 | 278 | 17 | 1 | 456 | 1 | 497 | 1.57e-62 | 214 |
MS.gene46007.t1 | AT3G09140 | 30.354 | 537 | 281 | 17 | 1 | 456 | 1 | 525 | 1.09e-58 | 204 |
MS.gene46007.t1 | AT5G01140 | 29.498 | 478 | 289 | 9 | 12 | 464 | 9 | 463 | 7.88e-58 | 201 |
MS.gene46007.t1 | AT5G01120 | 30.083 | 482 | 285 | 11 | 13 | 448 | 10 | 485 | 2.57e-57 | 200 |
MS.gene46007.t1 | AT5G01150 | 30.390 | 487 | 283 | 13 | 12 | 455 | 9 | 482 | 1.02e-55 | 196 |
MS.gene46007.t1 | AT5G43240 | 29.750 | 521 | 292 | 16 | 13 | 477 | 10 | 512 | 5.17e-52 | 186 |
MS.gene46007.t1 | AT5G43240 | 29.750 | 521 | 292 | 16 | 13 | 477 | 10 | 512 | 5.17e-52 | 186 |
MS.gene46007.t1 | AT5G43240 | 29.750 | 521 | 292 | 16 | 13 | 477 | 10 | 512 | 5.17e-52 | 186 |
MS.gene46007.t1 | AT3G09110 | 33.437 | 323 | 199 | 7 | 12 | 327 | 9 | 322 | 1.49e-51 | 180 |
MS.gene46007.t1 | AT5G01130 | 31.470 | 483 | 261 | 18 | 1 | 452 | 1 | 444 | 2.39e-50 | 180 |
MS.gene46007.t1 | AT3G09120 | 32.278 | 316 | 197 | 7 | 11 | 316 | 5 | 313 | 2.20e-41 | 152 |
MS.gene46007.t1 | AT5G37320 | 27.944 | 501 | 293 | 19 | 3 | 455 | 2 | 482 | 2.16e-40 | 153 |
MS.gene46007.t1 | AT5G43240 | 28.788 | 330 | 182 | 11 | 163 | 448 | 25 | 345 | 1.26e-22 | 100 |
Find 93 sgRNAs with CRISPR-Local
Find 167 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CAATGTTCAGTTTCATATTC+TGG | 0.191679 | 7.2:+43765662 | None:intergenic |
CAATTTCATTACTCAAATTC+TGG | 0.194815 | 7.2:+43765509 | None:intergenic |
GATCCTAAATCCCCTATTTC+TGG | 0.194829 | 7.2:-43764758 | MS.gene46007:CDS |
CTAGCATATCCTCCAGAAAT+AGG | 0.222209 | 7.2:+43764746 | None:intergenic |
CAGAATTTGAGTAATGAAAT+TGG | 0.244591 | 7.2:-43765508 | MS.gene46007:CDS |
TGAGCACCTGCTGAGTTTCT+TGG | 0.253622 | 7.2:+43765688 | None:intergenic |
CCTCCAGAAATAGGGGATTT+AGG | 0.261981 | 7.2:+43764755 | None:intergenic |
AAGAAAAGATACCTCTTTCT+TGG | 0.262602 | 7.2:+43765339 | None:intergenic |
CAAGGTTACCATTAGAGTTT+TGG | 0.279997 | 7.2:-43765938 | MS.gene46007:CDS |
TGATCTTCTCAAATTGTCTT+TGG | 0.284928 | 7.2:-43765224 | MS.gene46007:CDS |
GATACCTTGTAACGATTATA+AGG | 0.318916 | 7.2:-43764807 | MS.gene46007:CDS |
CTTGGTGATGTTGATATTAA+CGG | 0.332558 | 7.2:+43765357 | None:intergenic |
AAAGTTGTCGTAACAACATT+TGG | 0.340302 | 7.2:+43765433 | None:intergenic |
AATACTGTGTAAGTTTCTTC+AGG | 0.340897 | 7.2:-43765576 | MS.gene46007:CDS |
ATATCATCACTTTAAATTGT+TGG | 0.353901 | 7.2:+43763210 | None:intergenic |
GAGAACAAGACTTGCAGAAT+TGG | 0.357185 | 7.2:-43765604 | MS.gene46007:CDS |
TCAAAATTTGCTTTGACAAA+CGG | 0.362323 | 7.2:-43764466 | MS.gene46007:CDS |
TAGCATATCCTCCAGAAATA+GGG | 0.363628 | 7.2:+43764747 | None:intergenic |
GAGGAAATGGTCGTTAATAT+TGG | 0.365896 | 7.2:-43764617 | MS.gene46007:CDS |
TTAACCTCCATTCGGTTACT+TGG | 0.371862 | 7.2:+43765139 | None:intergenic |
TAAATTATCAATGCAGCTTA+AGG | 0.378298 | 7.2:+43764946 | None:intergenic |
AACCACCATCAACATAGATT+TGG | 0.380923 | 7.2:+43763273 | None:intergenic |
AACGGCCTCAACCAGTTCAT+TGG | 0.391379 | 7.2:-43764448 | MS.gene46007:intron |
GCTTCTTAACATTGCGCTTA+GGG | 0.394593 | 7.2:-43765849 | MS.gene46007:CDS |
TCAAATTCTGGAATTCTTCT+CGG | 0.402305 | 7.2:+43765521 | None:intergenic |
TTAAATCTCCTTCAGAAGCT+TGG | 0.404186 | 7.2:-43765412 | MS.gene46007:CDS |
AACCGAATGGAGGTTAATAT+TGG | 0.408331 | 7.2:-43765133 | MS.gene46007:CDS |
GGCAGGAAGTAGATCTGTTC+AGG | 0.408889 | 7.2:-43763993 | MS.gene46007:intron |
TACAAGGTATCGGTAATATC+TGG | 0.416442 | 7.2:+43764819 | None:intergenic |
AGCTTCTTAACATTGCGCTT+AGG | 0.417921 | 7.2:-43765850 | MS.gene46007:CDS |
AATATTGAAGCACTGAGCTT+TGG | 0.420564 | 7.2:-43765796 | MS.gene46007:CDS |
ATCAACCAAATCTATGTTGA+TGG | 0.421611 | 7.2:-43763278 | MS.gene46007:CDS |
AAGATATGAAATACCATCAA+TGG | 0.434003 | 7.2:+43764670 | None:intergenic |
TACTATACTAACCAATGAAC+TGG | 0.434085 | 7.2:+43764437 | None:intergenic |
AAATGCTTGGAATAGTTAGT+AGG | 0.436434 | 7.2:+43764864 | None:intergenic |
CTTGTCCACCAAAACTCTAA+TGG | 0.440326 | 7.2:+43765930 | None:intergenic |
ACTTAATGATGTGGAGGAAA+TGG | 0.448325 | 7.2:-43764630 | MS.gene46007:CDS |
TGAGCTCAGAAAAGTGCTTA+AGG | 0.457575 | 7.2:-43764904 | MS.gene46007:CDS |
TCTATTTGCTGAGGCAGATA+AGG | 0.457603 | 7.2:-43765893 | MS.gene46007:CDS |
AAAGGAAGAATCTAACGAAA+TGG | 0.460633 | 7.2:-43765104 | MS.gene46007:CDS |
TACCAATATTAACCTCCATT+CGG | 0.462117 | 7.2:+43765131 | None:intergenic |
CACATTGTGTACCAACAATC+TGG | 0.462685 | 7.2:+43763374 | None:intergenic |
CAGAAATAACGTCACTTACA+AGG | 0.471169 | 7.2:-43763330 | MS.gene46007:CDS |
CTTACCTTATAATCGTTACA+AGG | 0.487269 | 7.2:+43764803 | None:intergenic |
ACTCCAATGCCATCCATTGA+TGG | 0.490084 | 7.2:-43764683 | MS.gene46007:CDS |
GTTCGTGAGTTCAGACTGTA+TGG | 0.490803 | 7.2:+43764841 | None:intergenic |
GGTTAATATTGGTAAAGAAA+AGG | 0.492157 | 7.2:-43765122 | MS.gene46007:CDS |
ATTTCCTCCACATCATTAAG+TGG | 0.492887 | 7.2:+43764632 | None:intergenic |
AGGAATCAGAAATGTATTTG+TGG | 0.500975 | 7.2:-43765556 | MS.gene46007:CDS |
GCATTGGAGTCACAACCAAC+TGG | 0.508849 | 7.2:+43764696 | None:intergenic |
CAAGACCAAGGCCAGATTGT+TGG | 0.515955 | 7.2:-43763385 | MS.gene46007:CDS |
CATCCAGCAGTATCATCATT+AGG | 0.516253 | 7.2:+43763460 | None:intergenic |
GATCTTGTTTATTGAAGCAG+AGG | 0.517035 | 7.2:-43765047 | MS.gene46007:CDS |
CAGCCTAATGATGATACTGC+TGG | 0.517497 | 7.2:-43763463 | MS.gene46007:CDS |
TTTCTCACCTTTCCCTTGGG+AGG | 0.518315 | 7.2:-43764998 | MS.gene46007:CDS |
TAACCTCCATTCGGTTACTT+GGG | 0.521189 | 7.2:+43765140 | None:intergenic |
GTGTACCAACAATCTGGCCT+TGG | 0.521461 | 7.2:+43763380 | None:intergenic |
TATCAACATCACCAAGAAAG+AGG | 0.532453 | 7.2:-43765350 | MS.gene46007:intron |
CATTGCAAAACTTGTGGCTA+AGG | 0.537453 | 7.2:-43765824 | MS.gene46007:CDS |
TCAGACTGTATGGAAATGCT+TGG | 0.540758 | 7.2:+43764851 | None:intergenic |
CTTGTTCTCACAGCAGAAGT+AGG | 0.541416 | 7.2:+43765618 | None:intergenic |
ATACCATCAATGGATGGCAT+TGG | 0.542259 | 7.2:+43764680 | None:intergenic |
TTATAATCGTTACAAGGTAT+CGG | 0.556667 | 7.2:+43764809 | None:intergenic |
CATTGACTCCAAGCTTCTGA+AGG | 0.561296 | 7.2:+43765404 | None:intergenic |
AATGATGATACTGCTGGATG+TGG | 0.562722 | 7.2:-43763457 | MS.gene46007:CDS |
TTTAGTCCCAAGTAACCGAA+TGG | 0.566006 | 7.2:-43765146 | MS.gene46007:CDS |
ATCAATCCAAGAAACTCAGC+AGG | 0.567136 | 7.2:-43765694 | MS.gene46007:CDS |
ACTAACCAATGAACTGGTTG+AGG | 0.567961 | 7.2:+43764443 | None:intergenic |
TAACACTCCTCCCAAGGGAA+AGG | 0.572666 | 7.2:+43764991 | None:intergenic |
AGCATATCCTCCAGAAATAG+GGG | 0.573043 | 7.2:+43764748 | None:intergenic |
CTCAGCAAAACAAGTAGACA+AGG | 0.581182 | 7.2:-43765956 | MS.gene46007:CDS |
TCTCACAGCAGAAGTAGGAC+TGG | 0.581921 | 7.2:+43765623 | None:intergenic |
CATATGTAACACTCCTCCCA+AGG | 0.585037 | 7.2:+43764985 | None:intergenic |
TATGAAATACCATCAATGGA+TGG | 0.601386 | 7.2:+43764674 | None:intergenic |
AAATAAAGTTCTATTTGCTG+AGG | 0.602370 | 7.2:-43765902 | MS.gene46007:CDS |
AGGGACCATTGCAAAACTTG+TGG | 0.604088 | 7.2:-43765830 | MS.gene46007:CDS |
CGTTAATATTGGCCAGAAGG+AGG | 0.604404 | 7.2:-43764606 | MS.gene46007:intron |
GGTCGTTAATATTGGCCAGA+AGG | 0.607810 | 7.2:-43764609 | MS.gene46007:CDS |
GAACGTCCCACTTAATGATG+TGG | 0.609331 | 7.2:-43764639 | MS.gene46007:CDS |
ACAGCAGAAGTAGGACTGGA+AGG | 0.610171 | 7.2:+43765627 | None:intergenic |
AAGCTTGGAGTCAATGACAT+TGG | 0.612687 | 7.2:-43765397 | MS.gene46007:CDS |
CGTCCCACTTAATGATGTGG+AGG | 0.619494 | 7.2:-43764636 | MS.gene46007:CDS |
TTAAATATAAAGTCTGACAG+AGG | 0.620186 | 7.2:+43765190 | None:intergenic |
AACCAAATCTATGTTGATGG+TGG | 0.623412 | 7.2:-43763275 | MS.gene46007:CDS |
TTTCCTCCACATCATTAAGT+GGG | 0.624477 | 7.2:+43764633 | None:intergenic |
CCTAAATCCCCTATTTCTGG+AGG | 0.628731 | 7.2:-43764755 | MS.gene46007:CDS |
AGTCCCAAGTAACCGAATGG+AGG | 0.634833 | 7.2:-43765143 | MS.gene46007:CDS |
GTTGGCAATCAAGCATATTG+TGG | 0.641007 | 7.2:+43763228 | None:intergenic |
ATATGTAACACTCCTCCCAA+GGG | 0.664294 | 7.2:+43764986 | None:intergenic |
ATGTGTTGAATGTTGCAAGA+AGG | 0.665559 | 7.2:-43763356 | MS.gene46007:CDS |
AAAGTTGAAGGTCAAGACCA+AGG | 0.676584 | 7.2:-43763397 | MS.gene46007:CDS |
GGAGTGTTACATATGCTCGA+AGG | 0.683354 | 7.2:-43764977 | MS.gene46007:CDS |
TCTATGGTCACAGACATGCA+AGG | 0.694458 | 7.2:-43765725 | MS.gene46007:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | TTTTGTTATAATTATTATGT+AGG | + | chr7.2:43764796-43764815 | None:intergenic | 10.0% |
!! | AAAAAATCAACAAAAGTTGA+AGG | - | chr7.2:43765777-43765796 | MS.gene46007:CDS | 20.0% |
!! | AAACAAGTTATTAGTTAGAA+TGG | + | chr7.2:43765689-43765708 | None:intergenic | 20.0% |
!! | AACAAGTTATTAGTTAGAAT+GGG | + | chr7.2:43765688-43765707 | None:intergenic | 20.0% |
!! | AATACATGAATTTGGTAAAA+AGG | + | chr7.2:43765441-43765460 | None:intergenic | 20.0% |
!! | ATCTTGATGAAAAATATCTA+TGG | - | chr7.2:43763445-43763464 | MS.gene46007:CDS | 20.0% |
!! | GTGATAAAAATACATGAATT+TGG | + | chr7.2:43765449-43765468 | None:intergenic | 20.0% |
!! | TAACGATAATTATATAACTG+AGG | + | chr7.2:43765485-43765504 | None:intergenic | 20.0% |
!! | TATAATTATTATGTAGGATG+AGG | + | chr7.2:43764790-43764809 | None:intergenic | 20.0% |
!!! | ATTTTTGTGTTTGAAATATG+TGG | - | chr7.2:43765291-43765310 | MS.gene46007:intron | 20.0% |
!!! | CTTCAATATGTTGTTTAAAT+AGG | - | chr7.2:43763935-43763954 | MS.gene46007:intron | 20.0% |
!!! | TAATGAAATTGGTTTTGTTA+AGG | - | chr7.2:43763689-43763708 | MS.gene46007:intron | 20.0% |
! | AAGATATGAAATACCATCAA+TGG | + | chr7.2:43764519-43764538 | None:intergenic | 25.0% |
! | CAATTTCATTACTCAAATTC+TGG | + | chr7.2:43763680-43763699 | None:intergenic | 25.0% |
! | CAGAATTTGAGTAATGAAAT+TGG | - | chr7.2:43763678-43763697 | MS.gene46007:intron | 25.0% |
! | GGTTAATATTGGTAAAGAAA+AGG | - | chr7.2:43764064-43764083 | MS.gene46007:intron | 25.0% |
! | TAAATTATCAATGCAGCTTA+AGG | + | chr7.2:43764243-43764262 | None:intergenic | 25.0% |
! | TAGAAAAAGAAGAGAAGTAA+AGG | - | chr7.2:43765072-43765091 | MS.gene46007:CDS | 25.0% |
! | TGAACATGCACATATAATAA+AGG | + | chr7.2:43765172-43765191 | None:intergenic | 25.0% |
! | TTAAATATAAAGTCTGACAG+AGG | + | chr7.2:43763999-43764018 | None:intergenic | 25.0% |
! | TTATAATCGTTACAAGGTAT+CGG | + | chr7.2:43764380-43764399 | None:intergenic | 25.0% |
! | TTATCGTTATTTATGTGACA+AGG | - | chr7.2:43765496-43765515 | MS.gene46007:CDS | 25.0% |
! | TTATTATATGTGCATGTTCA+TGG | - | chr7.2:43765172-43765191 | MS.gene46007:CDS | 25.0% |
!! | AAATAAAGTTCTATTTGCTG+AGG | - | chr7.2:43763284-43763303 | MS.gene46007:CDS | 25.0% |
!! | TCAAAATTTGCTTTGACAAA+CGG | - | chr7.2:43764720-43764739 | MS.gene46007:CDS | 25.0% |
!! | TTTTTCATTGCTCTTAATCT+TGG | + | chr7.2:43765889-43765908 | None:intergenic | 25.0% |
AAAGGAAGAATCTAACGAAA+TGG | - | chr7.2:43764082-43764101 | MS.gene46007:intron | 30.0% | |
AAAGTTGTCGTAACAACATT+TGG | + | chr7.2:43763756-43763775 | None:intergenic | 30.0% | |
AAATGCTTGGAATAGTTAGT+AGG | + | chr7.2:43764325-43764344 | None:intergenic | 30.0% | |
AAGAAAAGATACCTCTTTCT+TGG | + | chr7.2:43763850-43763869 | None:intergenic | 30.0% | |
AATACTGTGTAAGTTTCTTC+AGG | - | chr7.2:43763610-43763629 | MS.gene46007:intron | 30.0% | |
AATGAATGGTACCCATATAT+GGG | - | chr7.2:43764973-43764992 | MS.gene46007:CDS | 30.0% | |
AGGAATCAGAAATGTATTTG+TGG | - | chr7.2:43763630-43763649 | MS.gene46007:intron | 30.0% | |
ATATGAACATCCCCATATAT+GGG | + | chr7.2:43764987-43765006 | None:intergenic | 30.0% | |
ATCAACCAAATCTATGTTGA+TGG | - | chr7.2:43765908-43765927 | MS.gene46007:CDS | 30.0% | |
ATGGAAGTTTAATAGATCCA+TGG | + | chr7.2:43765655-43765674 | None:intergenic | 30.0% | |
CAACCACAAGAAATCAAATA+TGG | + | chr7.2:43764667-43764686 | None:intergenic | 30.0% | |
CAATGTTCAGTTTCATATTC+TGG | + | chr7.2:43763527-43763546 | None:intergenic | 30.0% | |
CGATAATTATATAACTGAGG+TGG | + | chr7.2:43765482-43765501 | None:intergenic | 30.0% | |
CTAATAAGACATGACAATAG+AGG | + | chr7.2:43765402-43765421 | None:intergenic | 30.0% | |
CTTACCTTATAATCGTTACA+AGG | + | chr7.2:43764386-43764405 | None:intergenic | 30.0% | |
GATACCTTGTAACGATTATA+AGG | - | chr7.2:43764379-43764398 | MS.gene46007:intron | 30.0% | |
TACCAATATTAACCTCCATT+CGG | + | chr7.2:43764058-43764077 | None:intergenic | 30.0% | |
TACTATACTAACCAATGAAC+TGG | + | chr7.2:43764752-43764771 | None:intergenic | 30.0% | |
TACTTCTTGAGAAAGACTAA+GGG | - | chr7.2:43765367-43765386 | MS.gene46007:CDS | 30.0% | |
TAGTACTACACATAACAAGT+CGG | + | chr7.2:43764936-43764955 | None:intergenic | 30.0% | |
TATGAAATACCATCAATGGA+TGG | + | chr7.2:43764515-43764534 | None:intergenic | 30.0% | |
TGATCTTCTCAAATTGTCTT+TGG | - | chr7.2:43763962-43763981 | MS.gene46007:CDS | 30.0% | |
TTACTTCTTGAGAAAGACTA+AGG | - | chr7.2:43765366-43765385 | MS.gene46007:CDS | 30.0% | |
! | GTAACAACTGATTCAATATC+TGG | + | chr7.2:43765607-43765626 | None:intergenic | 30.0% |
! | GTTTGTCAAAGCAAATTTTG+AGG | + | chr7.2:43764721-43764740 | None:intergenic | 30.0% |
! | TCACCATATTTGATTTCTTG+TGG | - | chr7.2:43764661-43764680 | MS.gene46007:CDS | 30.0% |
! | TGTGTAGTACTAATTTTCCA+TGG | - | chr7.2:43764944-43764963 | MS.gene46007:CDS | 30.0% |
! | TTCTACCTTTTGCATCTTTA+GGG | + | chr7.2:43765243-43765262 | None:intergenic | 30.0% |
! | TTTCTACCTTTTGCATCTTT+AGG | + | chr7.2:43765244-43765263 | None:intergenic | 30.0% |
!! | CTTGGTGATGTTGATATTAA+CGG | + | chr7.2:43763832-43763851 | None:intergenic | 30.0% |
!! | TCAAATTCTGGAATTCTTCT+CGG | + | chr7.2:43763668-43763687 | None:intergenic | 30.0% |
!!! | GTTGATTTTTTGTTGTCTGA+AGG | + | chr7.2:43765768-43765787 | None:intergenic | 30.0% |
!!! | TGGTTTTGTTAAGGAAATGT+CGG | - | chr7.2:43763698-43763717 | MS.gene46007:intron | 30.0% |
AACCACCATCAACATAGATT+TGG | + | chr7.2:43765916-43765935 | None:intergenic | 35.0% | |
AACCGAATGGAGGTTAATAT+TGG | - | chr7.2:43764053-43764072 | MS.gene46007:intron | 35.0% | |
ACTTAATGATGTGGAGGAAA+TGG | - | chr7.2:43764556-43764575 | MS.gene46007:intron | 35.0% | |
ACTTCTTGAGAAAGACTAAG+GGG | - | chr7.2:43765368-43765387 | MS.gene46007:CDS | 35.0% | |
AGGAAGAAAGATTGAACGAA+AGG | - | chr7.2:43765092-43765111 | MS.gene46007:CDS | 35.0% | |
ATCAGTTGTTACTGAATGAG+AGG | - | chr7.2:43765615-43765634 | MS.gene46007:CDS | 35.0% | |
ATGAATGGTACCCATATATG+GGG | - | chr7.2:43764974-43764993 | MS.gene46007:CDS | 35.0% | |
ATGTGTTGAATGTTGCAAGA+AGG | - | chr7.2:43765830-43765849 | MS.gene46007:CDS | 35.0% | |
ATTTCCTCCACATCATTAAG+TGG | + | chr7.2:43764557-43764576 | None:intergenic | 35.0% | |
CAATGAATGGTACCCATATA+TGG | - | chr7.2:43764972-43764991 | MS.gene46007:CDS | 35.0% | |
CAGAAATAACGTCACTTACA+AGG | - | chr7.2:43765856-43765875 | MS.gene46007:CDS | 35.0% | |
CATATGAACATCCCCATATA+TGG | + | chr7.2:43764988-43765007 | None:intergenic | 35.0% | |
CATATGATCTTAGGGTAATG+AGG | - | chr7.2:43765002-43765021 | MS.gene46007:CDS | 35.0% | |
GAGGAAATGGTCGTTAATAT+TGG | - | chr7.2:43764569-43764588 | MS.gene46007:intron | 35.0% | |
GGGATGTTCATATGATCTTA+GGG | - | chr7.2:43764994-43765013 | MS.gene46007:CDS | 35.0% | |
TACCATTCATTGCATTTCCA+TGG | + | chr7.2:43764964-43764983 | None:intergenic | 35.0% | |
TAGCATATCCTCCAGAAATA+GGG | + | chr7.2:43764442-43764461 | None:intergenic | 35.0% | |
TAGTTAGAATGGGAGAATGA+GGG | + | chr7.2:43765678-43765697 | None:intergenic | 35.0% | |
TATCAACATCACCAAGAAAG+AGG | - | chr7.2:43763836-43763855 | MS.gene46007:intron | 35.0% | |
TCAGTTGTTACTGAATGAGA+GGG | - | chr7.2:43765616-43765635 | MS.gene46007:CDS | 35.0% | |
TCTGTCACCAAAAACGTTAA+TGG | + | chr7.2:43764470-43764489 | None:intergenic | 35.0% | |
TTAAATCTCCTTCAGAAGCT+TGG | - | chr7.2:43763774-43763793 | MS.gene46007:intron | 35.0% | |
TTAGTTAGAATGGGAGAATG+AGG | + | chr7.2:43765679-43765698 | None:intergenic | 35.0% | |
TTCCATGGAAATGCAATGAA+TGG | - | chr7.2:43764959-43764978 | MS.gene46007:CDS | 35.0% | |
TTTCCTCCACATCATTAAGT+GGG | + | chr7.2:43764556-43764575 | None:intergenic | 35.0% | |
! | AACCAAATCTATGTTGATGG+TGG | - | chr7.2:43765911-43765930 | MS.gene46007:CDS | 35.0% |
! | ATTTGATTTCTTGTGGTTGC+AGG | - | chr7.2:43764668-43764687 | MS.gene46007:CDS | 35.0% |
! | CAAGGTTACCATTAGAGTTT+TGG | - | chr7.2:43763248-43763267 | MS.gene46007:CDS | 35.0% |
! | GATCTTGTTTATTGAAGCAG+AGG | - | chr7.2:43764139-43764158 | MS.gene46007:intron | 35.0% |
! | TCTACCTTTTGCATCTTTAG+GGG | + | chr7.2:43765242-43765261 | None:intergenic | 35.0% |
! | TTTGATTTCTTGTGGTTGCA+GGG | - | chr7.2:43764669-43764688 | MS.gene46007:CDS | 35.0% |
!! | AATATTGAAGCACTGAGCTT+TGG | - | chr7.2:43763390-43763409 | MS.gene46007:CDS | 35.0% |
!! | TACAAGGTATCGGTAATATC+TGG | + | chr7.2:43764370-43764389 | None:intergenic | 35.0% |
!! | TAGAGCACCATTAACGTTTT+TGG | - | chr7.2:43764460-43764479 | MS.gene46007:CDS | 35.0% |
!!! | ATGTAGGATGAGGTTTTGTT+TGG | + | chr7.2:43764780-43764799 | None:intergenic | 35.0% |
AAAGTTGAAGGTCAAGACCA+AGG | - | chr7.2:43765789-43765808 | MS.gene46007:CDS | 40.0% | |
AAGCTTGGAGTCAATGACAT+TGG | - | chr7.2:43763789-43763808 | MS.gene46007:intron | 40.0% | |
AATGATGATACTGCTGGATG+TGG | - | chr7.2:43765729-43765748 | MS.gene46007:CDS | 40.0% | |
ACTAACCAATGAACTGGTTG+AGG | + | chr7.2:43764746-43764765 | None:intergenic | 40.0% | |
AGCATATCCTCCAGAAATAG+GGG | + | chr7.2:43764441-43764460 | None:intergenic | 40.0% | |
AGCTTCTTAACATTGCGCTT+AGG | - | chr7.2:43763336-43763355 | MS.gene46007:CDS | 40.0% | |
ATACCATCAATGGATGGCAT+TGG | + | chr7.2:43764509-43764528 | None:intergenic | 40.0% | |
ATATGTAACACTCCTCCCAA+GGG | + | chr7.2:43764203-43764222 | None:intergenic | 40.0% | |
ATCAATCCAAGAAACTCAGC+AGG | - | chr7.2:43763492-43763511 | MS.gene46007:intron | 40.0% | |
CACATTGTGTACCAACAATC+TGG | + | chr7.2:43765815-43765834 | None:intergenic | 40.0% | |
CATCCAGCAGTATCATCATT+AGG | + | chr7.2:43765729-43765748 | None:intergenic | 40.0% | |
CATTGCAAAACTTGTGGCTA+AGG | - | chr7.2:43763362-43763381 | MS.gene46007:CDS | 40.0% | |
CTAGCATATCCTCCAGAAAT+AGG | + | chr7.2:43764443-43764462 | None:intergenic | 40.0% | |
CTCAGCAAAACAAGTAGACA+AGG | - | chr7.2:43763230-43763249 | MS.gene46007:CDS | 40.0% | |
CTTGTCCACCAAAACTCTAA+TGG | + | chr7.2:43763259-43763278 | None:intergenic | 40.0% | |
GAGAACAAGACTTGCAGAAT+TGG | - | chr7.2:43763582-43763601 | MS.gene46007:intron | 40.0% | |
GATCCTAAATCCCCTATTTC+TGG | - | chr7.2:43764428-43764447 | MS.gene46007:intron | 40.0% | |
GCTTCTTAACATTGCGCTTA+GGG | - | chr7.2:43763337-43763356 | MS.gene46007:CDS | 40.0% | |
GGGGATGTTCATATGATCTT+AGG | - | chr7.2:43764993-43765012 | MS.gene46007:CDS | 40.0% | |
GTAACCACCTCTTATGTGTT+CGG | - | chr7.2:43764904-43764923 | MS.gene46007:CDS | 40.0% | |
GTTACTACCGAACACATAAG+AGG | + | chr7.2:43764914-43764933 | None:intergenic | 40.0% | |
GTTGGCAATCAAGCATATTG+TGG | + | chr7.2:43765961-43765980 | None:intergenic | 40.0% | |
TAACCTCCATTCGGTTACTT+GGG | + | chr7.2:43764049-43764068 | None:intergenic | 40.0% | |
TATATGTGCATGTTCATGGC+AGG | - | chr7.2:43765176-43765195 | MS.gene46007:CDS | 40.0% | |
TCAGACTGTATGGAAATGCT+TGG | + | chr7.2:43764338-43764357 | None:intergenic | 40.0% | |
TTAACCTCCATTCGGTTACT+TGG | + | chr7.2:43764050-43764069 | None:intergenic | 40.0% | |
TTTAGTCCCAAGTAACCGAA+TGG | - | chr7.2:43764040-43764059 | MS.gene46007:intron | 40.0% | |
! | AGTTTTCTCACCTTTCCCTT+GGG | - | chr7.2:43764185-43764204 | MS.gene46007:intron | 40.0% |
! | CTACCTTTTGCATCTTTAGG+GGG | + | chr7.2:43765241-43765260 | None:intergenic | 40.0% |
! | CTTAGCCACAAGTTTTGCAA+TGG | + | chr7.2:43763364-43763383 | None:intergenic | 40.0% |
! | TAGTTTTCTCACCTTTCCCT+TGG | - | chr7.2:43764184-43764203 | MS.gene46007:intron | 40.0% |
! | TCTATTTGCTGAGGCAGATA+AGG | - | chr7.2:43763293-43763312 | MS.gene46007:CDS | 40.0% |
!! | GGTTACCATTAGAGTTTTGG+TGG | - | chr7.2:43763251-43763270 | MS.gene46007:CDS | 40.0% |
!! | TGAGCTCAGAAAAGTGCTTA+AGG | - | chr7.2:43764282-43764301 | MS.gene46007:intron | 40.0% |
!!! | CTTGTCTACTTGTTTTGCTG+AGG | + | chr7.2:43763232-43763251 | None:intergenic | 40.0% |
AATAGATCCATGGTCACCCA+TGG | + | chr7.2:43765645-43765664 | None:intergenic | 45.0% | |
ACTACCGAACACATAAGAGG+TGG | + | chr7.2:43764911-43764930 | None:intergenic | 45.0% | |
ACTCCAATGCCATCCATTGA+TGG | - | chr7.2:43764503-43764522 | MS.gene46007:intron | 45.0% | |
AGGGACCATTGCAAAACTTG+TGG | - | chr7.2:43763356-43763375 | MS.gene46007:CDS | 45.0% | |
ATTGGCCAGAAGGAGGTAAA+AGG | - | chr7.2:43764587-43764606 | MS.gene46007:intron | 45.0% | |
CAGCCTAATGATGATACTGC+TGG | - | chr7.2:43765723-43765742 | MS.gene46007:CDS | 45.0% | |
CATATGTAACACTCCTCCCA+AGG | + | chr7.2:43764204-43764223 | None:intergenic | 45.0% | |
CCTCCAGAAATAGGGGATTT+AGG | + | chr7.2:43764434-43764453 | None:intergenic | 45.0% | |
CGTTAATATTGGCCAGAAGG+AGG | - | chr7.2:43764580-43764599 | MS.gene46007:intron | 45.0% | |
CTTGTTCTCACAGCAGAAGT+AGG | + | chr7.2:43763571-43763590 | None:intergenic | 45.0% | |
GAACGTCCCACTTAATGATG+TGG | - | chr7.2:43764547-43764566 | MS.gene46007:intron | 45.0% | |
GGTCGTTAATATTGGCCAGA+AGG | - | chr7.2:43764577-43764596 | MS.gene46007:intron | 45.0% | |
GTTCGTGAGTTCAGACTGTA+TGG | + | chr7.2:43764348-43764367 | None:intergenic | 45.0% | |
TAGAATGGGAGAATGAGGGA+TGG | + | chr7.2:43765674-43765693 | None:intergenic | 45.0% | |
TAGCCCCCTAAAGATGCAAA+AGG | - | chr7.2:43765235-43765254 | MS.gene46007:intron | 45.0% | |
TCTATGGTCACAGACATGCA+AGG | - | chr7.2:43763461-43763480 | MS.gene46007:CDS | 45.0% | |
TTGGCCAGAAGGAGGTAAAA+GGG | - | chr7.2:43764588-43764607 | MS.gene46007:intron | 45.0% | |
! | AGATTGAACGAAAGGTGCGA+AGG | - | chr7.2:43765100-43765119 | MS.gene46007:CDS | 45.0% |
! | GGAGTGTTACATATGCTCGA+AGG | - | chr7.2:43764209-43764228 | MS.gene46007:intron | 45.0% |
!! | CATTGACTCCAAGCTTCTGA+AGG | + | chr7.2:43763785-43763804 | None:intergenic | 45.0% |
!! | CCTAAATCCCCTATTTCTGG+AGG | - | chr7.2:43764431-43764450 | MS.gene46007:intron | 45.0% |
!!! | GTTTTTGGTGACAGACCAGT+TGG | - | chr7.2:43764475-43764494 | MS.gene46007:CDS | 45.0% |
AACGGCCTCAACCAGTTCAT+TGG | - | chr7.2:43764738-43764757 | MS.gene46007:CDS | 50.0% | |
ACAGCAGAAGTAGGACTGGA+AGG | + | chr7.2:43763562-43763581 | None:intergenic | 50.0% | |
ACTGAATGAGAGGGAAGCCA+TGG | - | chr7.2:43765625-43765644 | MS.gene46007:CDS | 50.0% | |
AGTCCCAAGTAACCGAATGG+AGG | - | chr7.2:43764043-43764062 | MS.gene46007:intron | 50.0% | |
CAAGACCAAGGCCAGATTGT+TGG | - | chr7.2:43765801-43765820 | MS.gene46007:CDS | 50.0% | |
CGTCCCACTTAATGATGTGG+AGG | - | chr7.2:43764550-43764569 | MS.gene46007:intron | 50.0% | |
CTGAATGAGAGGGAAGCCAT+GGG | - | chr7.2:43765626-43765645 | MS.gene46007:CDS | 50.0% | |
GCATTGGAGTCACAACCAAC+TGG | + | chr7.2:43764493-43764512 | None:intergenic | 50.0% | |
GGCAGGAAGTAGATCTGTTC+AGG | - | chr7.2:43765193-43765212 | MS.gene46007:CDS | 50.0% | |
GTGTACCAACAATCTGGCCT+TGG | + | chr7.2:43765809-43765828 | None:intergenic | 50.0% | |
TAACACTCCTCCCAAGGGAA+AGG | + | chr7.2:43764198-43764217 | None:intergenic | 50.0% | |
TCTCACAGCAGAAGTAGGAC+TGG | + | chr7.2:43763566-43763585 | None:intergenic | 50.0% | |
TGAGCACCTGCTGAGTTTCT+TGG | + | chr7.2:43763501-43763520 | None:intergenic | 50.0% | |
TTTCTCACCTTTCCCTTGGG+AGG | - | chr7.2:43764188-43764207 | MS.gene46007:intron | 50.0% | |
! | CAGTCCCTTTTACCTCCTTC+TGG | + | chr7.2:43764595-43764614 | None:intergenic | 50.0% |
AGGGAAGCCATGGGTGACCA+TGG | - | chr7.2:43765635-43765654 | MS.gene46007:CDS | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr7.2 | gene | 43763216 | 43765992 | 43763216 | ID=MS.gene46007 |
chr7.2 | mRNA | 43763216 | 43765992 | 43763216 | ID=MS.gene46007.t1;Parent=MS.gene46007 |
chr7.2 | exon | 43765351 | 43765992 | 43765351 | ID=MS.gene46007.t1.exon1;Parent=MS.gene46007.t1 |
chr7.2 | CDS | 43765351 | 43765992 | 43765351 | ID=cds.MS.gene46007.t1;Parent=MS.gene46007.t1 |
chr7.2 | exon | 43764607 | 43765251 | 43764607 | ID=MS.gene46007.t1.exon2;Parent=MS.gene46007.t1 |
chr7.2 | CDS | 43764607 | 43765251 | 43764607 | ID=cds.MS.gene46007.t1;Parent=MS.gene46007.t1 |
chr7.2 | exon | 43764449 | 43764518 | 43764449 | ID=MS.gene46007.t1.exon3;Parent=MS.gene46007.t1 |
chr7.2 | CDS | 43764449 | 43764518 | 43764449 | ID=cds.MS.gene46007.t1;Parent=MS.gene46007.t1 |
chr7.2 | exon | 43763952 | 43764010 | 43763952 | ID=MS.gene46007.t1.exon4;Parent=MS.gene46007.t1 |
chr7.2 | CDS | 43763952 | 43764010 | 43763952 | ID=cds.MS.gene46007.t1;Parent=MS.gene46007.t1 |
chr7.2 | exon | 43763216 | 43763482 | 43763216 | ID=MS.gene46007.t1.exon5;Parent=MS.gene46007.t1 |
chr7.2 | CDS | 43763216 | 43763482 | 43763216 | ID=cds.MS.gene46007.t1;Parent=MS.gene46007.t1 |
Gene Sequence |
Protein sequence |