Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene46003.t1 | XP_013449059.1 | 51.8 | 506 | 121 | 7 | 3 | 412 | 14 | 492 | 2.70E-117 | 432.2 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene46003.t1 | A0A072U0X6 | 51.8 | 506 | 121 | 7 | 3 | 412 | 14 | 492 | 2.0e-117 | 432.2 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene46003.t1 | MTR_7g066260 | 50.820 | 488 | 155 | 13 | 2 | 412 | 13 | 492 | 1.91e-138 | 405 |
MS.gene46003.t1 | MTR_7g066310 | 52.326 | 430 | 158 | 8 | 2 | 412 | 5 | 406 | 1.37e-135 | 394 |
MS.gene46003.t1 | MTR_7g066340 | 48.941 | 472 | 175 | 13 | 2 | 412 | 10 | 476 | 4.30e-124 | 368 |
MS.gene46003.t1 | MTR_7g066580 | 43.404 | 470 | 145 | 9 | 10 | 386 | 1 | 442 | 8.42e-107 | 322 |
MS.gene46003.t1 | MTR_2g029400 | 43.146 | 445 | 135 | 12 | 2 | 379 | 12 | 405 | 1.65e-98 | 300 |
MS.gene46003.t1 | MTR_7g012680 | 44.144 | 444 | 194 | 11 | 2 | 395 | 12 | 451 | 2.87e-93 | 288 |
MS.gene46003.t1 | MTR_7g066360 | 60.072 | 278 | 90 | 5 | 144 | 411 | 212 | 478 | 1.70e-91 | 284 |
MS.gene46003.t1 | MTR_7g066360 | 56.028 | 141 | 34 | 3 | 5 | 144 | 15 | 128 | 1.92e-38 | 144 |
MS.gene46003.t1 | MTR_1g014060 | 42.402 | 408 | 184 | 7 | 13 | 395 | 9 | 390 | 2.36e-90 | 278 |
MS.gene46003.t1 | MTR_7g066280 | 43.405 | 417 | 119 | 11 | 109 | 412 | 1 | 413 | 2.17e-87 | 271 |
MS.gene46003.t1 | MTR_7g066290 | 58.167 | 251 | 69 | 3 | 144 | 390 | 216 | 434 | 2.21e-80 | 254 |
MS.gene46003.t1 | MTR_7g066290 | 55.102 | 147 | 39 | 2 | 2 | 147 | 13 | 133 | 2.80e-45 | 162 |
MS.gene46003.t1 | MTR_7g066400 | 53.469 | 245 | 107 | 3 | 147 | 385 | 190 | 433 | 3.84e-80 | 254 |
MS.gene46003.t1 | MTR_7g066400 | 44.928 | 138 | 33 | 3 | 4 | 140 | 12 | 107 | 2.06e-26 | 110 |
MS.gene46003.t1 | MTR_7g066350 | 57.787 | 244 | 93 | 5 | 145 | 385 | 209 | 445 | 8.21e-77 | 246 |
MS.gene46003.t1 | MTR_7g066350 | 58.621 | 145 | 32 | 3 | 2 | 144 | 7 | 125 | 9.26e-44 | 159 |
MS.gene46003.t1 | MTR_7g066430 | 35.041 | 488 | 215 | 13 | 1 | 389 | 1 | 485 | 8.01e-73 | 236 |
MS.gene46003.t1 | MTR_1g041315 | 56.769 | 229 | 93 | 3 | 147 | 373 | 227 | 451 | 1.75e-72 | 235 |
MS.gene46003.t1 | MTR_1g041315 | 51.389 | 144 | 43 | 2 | 2 | 144 | 12 | 129 | 6.79e-37 | 140 |
MS.gene46003.t1 | MTR_7g063920 | 36.484 | 455 | 187 | 8 | 3 | 389 | 10 | 430 | 5.39e-72 | 233 |
MS.gene46003.t1 | MTR_7g066570 | 48.288 | 292 | 114 | 6 | 145 | 404 | 207 | 493 | 2.72e-69 | 229 |
MS.gene46003.t1 | MTR_7g066570 | 56.774 | 155 | 39 | 3 | 3 | 156 | 13 | 140 | 8.44e-46 | 166 |
MS.gene46003.t1 | MTR_7g066680 | 44.340 | 318 | 114 | 6 | 128 | 385 | 20 | 334 | 3.21e-68 | 220 |
MS.gene46003.t1 | MTR_7g062300 | 33.065 | 496 | 186 | 9 | 3 | 387 | 11 | 471 | 1.49e-65 | 217 |
MS.gene46003.t1 | MTR_7g058710 | 47.482 | 278 | 111 | 3 | 144 | 389 | 203 | 477 | 1.31e-63 | 212 |
MS.gene46003.t1 | MTR_7g058710 | 51.748 | 143 | 30 | 2 | 2 | 143 | 10 | 114 | 2.57e-40 | 150 |
MS.gene46003.t1 | MTR_7g066480 | 34.967 | 449 | 194 | 12 | 2 | 391 | 14 | 423 | 1.35e-63 | 210 |
MS.gene46003.t1 | MTR_7g066490 | 34.624 | 439 | 191 | 11 | 4 | 391 | 16 | 409 | 1.51e-60 | 202 |
MS.gene46003.t1 | MTR_7g063820 | 33.473 | 478 | 215 | 12 | 5 | 389 | 11 | 478 | 2.98e-57 | 195 |
MS.gene46003.t1 | MTR_7g058700 | 46.914 | 243 | 83 | 3 | 147 | 389 | 725 | 921 | 4.26e-53 | 190 |
MS.gene46003.t1 | MTR_7g058700 | 52.143 | 140 | 25 | 4 | 16 | 153 | 531 | 630 | 9.33e-31 | 125 |
MS.gene46003.t1 | MTR_7g066390 | 55.618 | 178 | 45 | 2 | 238 | 411 | 1 | 148 | 4.38e-53 | 174 |
MS.gene46003.t1 | MTR_7g066410 | 37.857 | 280 | 137 | 4 | 147 | 389 | 233 | 512 | 3.53e-45 | 164 |
MS.gene46003.t1 | MTR_7g066410 | 44.138 | 145 | 53 | 3 | 4 | 146 | 10 | 128 | 1.89e-32 | 128 |
MS.gene46003.t1 | MTR_3g065200 | 32.088 | 455 | 178 | 14 | 4 | 376 | 3 | 408 | 7.65e-45 | 161 |
MS.gene46003.t1 | MTR_7g062280 | 39.051 | 274 | 130 | 5 | 144 | 389 | 221 | 485 | 2.78e-44 | 160 |
MS.gene46003.t1 | MTR_7g062280 | 42.857 | 140 | 53 | 3 | 3 | 141 | 9 | 122 | 3.73e-24 | 104 |
MS.gene46003.t1 | MTR_7g063720 | 41.860 | 215 | 108 | 5 | 187 | 387 | 13 | 224 | 3.56e-44 | 154 |
MS.gene46003.t1 | MTR_3g007740 | 40.784 | 255 | 137 | 6 | 144 | 389 | 193 | 442 | 4.45e-43 | 156 |
MS.gene46003.t1 | MTR_3g007740 | 41.727 | 139 | 42 | 4 | 1 | 138 | 6 | 106 | 2.11e-19 | 90.1 |
MS.gene46003.t1 | MTR_3g007740 | 28.365 | 208 | 126 | 6 | 196 | 383 | 8 | 212 | 3.09e-13 | 71.2 |
MS.gene46003.t1 | MTR_4g017470 | 27.557 | 479 | 232 | 9 | 5 | 389 | 13 | 470 | 1.01e-42 | 156 |
MS.gene46003.t1 | MTR_4g017470 | 27.632 | 228 | 132 | 7 | 191 | 401 | 6 | 217 | 3.78e-11 | 65.1 |
MS.gene46003.t1 | MTR_7g063670 | 39.200 | 250 | 139 | 4 | 147 | 389 | 208 | 451 | 6.31e-41 | 151 |
MS.gene46003.t1 | MTR_7g063670 | 37.241 | 145 | 47 | 5 | 5 | 143 | 16 | 122 | 1.18e-15 | 79.0 |
MS.gene46003.t1 | MTR_4g019310 | 36.620 | 284 | 127 | 8 | 145 | 389 | 221 | 490 | 5.48e-39 | 146 |
MS.gene46003.t1 | MTR_4g019310 | 36.364 | 187 | 95 | 6 | 7 | 189 | 11 | 177 | 1.03e-22 | 100 |
MS.gene46003.t1 | MTR_7g063830 | 40.000 | 250 | 128 | 6 | 144 | 389 | 207 | 438 | 1.03e-38 | 144 |
MS.gene46003.t1 | MTR_7g063830 | 41.176 | 153 | 62 | 4 | 5 | 155 | 11 | 137 | 3.49e-25 | 107 |
MS.gene46003.t1 | MTR_7g100420 | 32.775 | 418 | 188 | 12 | 5 | 389 | 40 | 397 | 3.52e-38 | 142 |
MS.gene46003.t1 | MTR_7g063660 | 34.783 | 276 | 142 | 5 | 144 | 389 | 204 | 471 | 1.69e-37 | 142 |
MS.gene46003.t1 | MTR_7g063660 | 46.763 | 139 | 47 | 2 | 3 | 140 | 8 | 120 | 4.86e-30 | 121 |
MS.gene46003.t1 | MTR_7g063660 | 29.412 | 221 | 126 | 7 | 192 | 383 | 4 | 223 | 1.64e-13 | 72.4 |
MS.gene46003.t1 | MTR_7g063840 | 35.165 | 273 | 140 | 4 | 144 | 389 | 205 | 467 | 1.41e-36 | 139 |
MS.gene46003.t1 | MTR_7g063840 | 42.568 | 148 | 52 | 4 | 1 | 141 | 1 | 122 | 2.19e-24 | 105 |
MS.gene46003.t1 | MTR_7g063840 | 30.317 | 221 | 120 | 10 | 194 | 383 | 7 | 224 | 1.61e-12 | 69.3 |
MS.gene46003.t1 | MTR_7g063900 | 37.895 | 285 | 129 | 7 | 144 | 389 | 207 | 482 | 2.46e-34 | 133 |
MS.gene46003.t1 | MTR_7g063900 | 46.809 | 141 | 48 | 2 | 4 | 143 | 10 | 124 | 3.57e-29 | 119 |
MS.gene46003.t1 | MTR_7g063900 | 27.193 | 228 | 124 | 10 | 191 | 383 | 6 | 226 | 9.00e-14 | 73.2 |
MS.gene46003.t1 | MTR_7g063880 | 36.429 | 280 | 122 | 10 | 144 | 390 | 207 | 463 | 1.87e-33 | 130 |
MS.gene46003.t1 | MTR_7g063880 | 45.570 | 158 | 44 | 4 | 3 | 144 | 10 | 141 | 4.07e-29 | 118 |
MS.gene46003.t1 | MTR_7g063880 | 28.889 | 225 | 123 | 7 | 192 | 383 | 6 | 226 | 1.67e-11 | 66.2 |
MS.gene46003.t1 | MTR_4g017830 | 29.801 | 302 | 161 | 6 | 144 | 400 | 217 | 512 | 1.98e-30 | 123 |
MS.gene46003.t1 | MTR_4g017830 | 38.889 | 144 | 62 | 6 | 5 | 145 | 13 | 133 | 8.49e-18 | 85.9 |
MS.gene46003.t1 | MTR_7g063890 | 36.842 | 285 | 132 | 8 | 144 | 389 | 223 | 498 | 7.10e-28 | 115 |
MS.gene46003.t1 | MTR_7g063890 | 44.755 | 143 | 52 | 3 | 3 | 144 | 26 | 142 | 2.74e-27 | 114 |
MS.gene46003.t1 | MTR_7g063850 | 34.234 | 222 | 112 | 6 | 197 | 389 | 66 | 282 | 8.49e-26 | 106 |
MS.gene46003.t1 | MTR_7g063690 | 34.649 | 228 | 123 | 7 | 5 | 224 | 13 | 222 | 4.98e-25 | 103 |
MS.gene46003.t1 | MTR_4g019340 | 30.980 | 255 | 149 | 6 | 144 | 377 | 253 | 501 | 2.43e-24 | 105 |
MS.gene46003.t1 | MTR_4g019340 | 37.931 | 145 | 67 | 2 | 5 | 149 | 39 | 160 | 1.33e-20 | 94.0 |
MS.gene46003.t1 | MTR_4g017440 | 30.796 | 289 | 148 | 8 | 144 | 389 | 223 | 502 | 3.78e-24 | 104 |
MS.gene46003.t1 | MTR_4g017440 | 38.406 | 138 | 67 | 4 | 5 | 139 | 15 | 137 | 6.72e-21 | 95.1 |
MS.gene46003.t1 | MTR_4g017610 | 34.010 | 197 | 96 | 5 | 7 | 200 | 16 | 181 | 3.47e-23 | 101 |
MS.gene46003.t1 | MTR_4g017610 | 29.577 | 284 | 158 | 9 | 129 | 385 | 207 | 475 | 6.03e-20 | 92.0 |
MS.gene46003.t1 | MTR_4g017410 | 41.007 | 139 | 60 | 5 | 5 | 139 | 10 | 130 | 1.93e-22 | 99.8 |
MS.gene46003.t1 | MTR_4g017410 | 29.078 | 282 | 173 | 9 | 129 | 389 | 209 | 484 | 5.55e-19 | 89.4 |
MS.gene46003.t1 | MTR_7g062270 | 39.855 | 138 | 56 | 2 | 5 | 141 | 11 | 122 | 2.10e-22 | 98.6 |
MS.gene46003.t1 | MTR_4g017550 | 30.693 | 303 | 152 | 10 | 129 | 386 | 181 | 470 | 3.07e-21 | 95.9 |
MS.gene46003.t1 | MTR_4g017550 | 43.529 | 85 | 40 | 3 | 62 | 139 | 23 | 106 | 2.03e-11 | 65.9 |
MS.gene46003.t1 | MTR_8g023240 | 24.632 | 475 | 247 | 16 | 5 | 390 | 38 | 490 | 2.42e-20 | 93.6 |
MS.gene46003.t1 | MTR_4g019240 | 32.704 | 159 | 81 | 4 | 5 | 162 | 14 | 147 | 3.82e-18 | 82.4 |
MS.gene46003.t1 | MTR_4g019330 | 34.078 | 179 | 86 | 5 | 211 | 387 | 32 | 180 | 5.18e-17 | 79.3 |
MS.gene46003.t1 | MTR_7g063760 | 53.846 | 65 | 29 | 1 | 326 | 389 | 3 | 67 | 1.76e-15 | 71.2 |
MS.gene46003.t1 | MTR_2g067310 | 68.627 | 51 | 16 | 0 | 14 | 64 | 57 | 107 | 1.28e-14 | 73.6 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene46003.t1 | AT5G01140 | 28.322 | 286 | 182 | 4 | 145 | 411 | 191 | 472 | 1.68e-21 | 96.7 |
MS.gene46003.t1 | AT3G09120 | 36.923 | 130 | 55 | 1 | 2 | 131 | 4 | 106 | 9.52e-20 | 89.7 |
MS.gene46003.t1 | AT3G09110 | 39.041 | 146 | 56 | 6 | 6 | 145 | 11 | 129 | 1.82e-19 | 89.4 |
MS.gene46003.t1 | AT5G01150 | 36.232 | 138 | 58 | 4 | 6 | 143 | 11 | 118 | 2.94e-17 | 84.0 |
MS.gene46003.t1 | AT5G01150 | 25.000 | 276 | 175 | 4 | 145 | 392 | 211 | 482 | 1.23e-13 | 72.8 |
MS.gene46003.t1 | AT5G01120 | 36.220 | 127 | 55 | 2 | 5 | 131 | 10 | 110 | 3.51e-17 | 84.0 |
MS.gene46003.t1 | AT5G43240 | 32.450 | 151 | 71 | 4 | 5 | 150 | 10 | 134 | 8.97e-17 | 82.4 |
MS.gene46003.t1 | AT5G43240 | 32.450 | 151 | 71 | 4 | 5 | 150 | 10 | 134 | 8.97e-17 | 82.4 |
MS.gene46003.t1 | AT5G43240 | 32.450 | 151 | 71 | 4 | 5 | 150 | 10 | 134 | 8.97e-17 | 82.4 |
MS.gene46003.t1 | AT3G09140 | 32.877 | 146 | 69 | 4 | 2 | 144 | 7 | 126 | 4.67e-16 | 80.5 |
MS.gene46003.t1 | AT3G09140 | 29.057 | 265 | 159 | 8 | 147 | 385 | 228 | 489 | 1.47e-14 | 75.9 |
MS.gene46003.t1 | AT3G09140 | 32.877 | 146 | 69 | 4 | 2 | 144 | 7 | 126 | 4.75e-16 | 80.5 |
MS.gene46003.t1 | AT3G09140 | 28.881 | 277 | 168 | 8 | 135 | 385 | 244 | 517 | 5.06e-16 | 80.5 |
MS.gene46003.t1 | AT5G01130 | 26.562 | 256 | 163 | 6 | 145 | 389 | 203 | 444 | 3.38e-15 | 77.4 |
MS.gene46003.t1 | AT5G01130 | 34.074 | 135 | 63 | 2 | 4 | 138 | 9 | 117 | 2.40e-14 | 75.1 |
Find 84 sgRNAs with CRISPR-Local
Find 180 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CAATTTCCTCAATGTCATTT+AGG | 0.087241 | 7.2:+43860315 | None:intergenic |
GATCCCAAATCCCCTGTTTC+TGG | 0.158108 | 7.2:-43860443 | MS.gene46003:CDS |
GCTTCTTAACATTGCCTTTA+GGG | 0.201640 | 7.2:-43861590 | MS.gene46003:CDS |
CAAGACCTCACCACCTTCTT+TGG | 0.233427 | 7.2:+43860475 | None:intergenic |
TCCTCCAGAAACAGGGGATT+TGG | 0.246382 | 7.2:+43860439 | None:intergenic |
GCATTAGCTCACTTCCTTTA+GGG | 0.272308 | 7.2:-43861512 | MS.gene46003:CDS |
AGCATTAGCTCACTTCCTTT+AGG | 0.284156 | 7.2:-43861513 | MS.gene46003:CDS |
AATTTCCTCAATGTCATTTA+GGG | 0.286648 | 7.2:+43860316 | None:intergenic |
AATATCGAAGCAATGAAATT+TGG | 0.294760 | 7.2:-43861459 | MS.gene46003:CDS |
AATATCGAAGCAATGAAATT+TGG | 0.294760 | 7.2:-43861537 | MS.gene46003:CDS |
GAGGAAATTGTCGTTAATAT+TGG | 0.297073 | 7.2:-43860302 | MS.gene46003:CDS |
AGCTTCTTAACATTGCCTTT+AGG | 0.310196 | 7.2:-43861591 | MS.gene46003:CDS |
CGCAGGACCAACAACGATTA+TGG | 0.320701 | 7.2:-43860411 | MS.gene46003:CDS |
GCGACATATCCTCCAGAAAC+AGG | 0.365281 | 7.2:+43860431 | None:intergenic |
CGAAGTTACATTGAAAGTTA+TGG | 0.380657 | 7.2:-43861679 | MS.gene46003:CDS |
CCTCCAGAAACAGGGGATTT+GGG | 0.381514 | 7.2:+43860440 | None:intergenic |
CCATCTGAAGAGGGTAAGAT+TGG | 0.398069 | 7.2:-43860836 | MS.gene46003:CDS |
TCAACTAGAAACATTCTGTT+TGG | 0.399046 | 7.2:-43860749 | MS.gene46003:CDS |
GGCAGGAAGTAGATCTGTTC+AGG | 0.408889 | 7.2:-43859066 | MS.gene46003:intron |
ATCTTGATGGGAAATATCTA+TGG | 0.417112 | 7.2:-43861404 | MS.gene46003:CDS |
GAAGAGGGTAAGATTGGTAT+TGG | 0.419917 | 7.2:-43860830 | MS.gene46003:CDS |
TCTGTCACCATAATCGTTGT+TGG | 0.458655 | 7.2:+43860404 | None:intergenic |
CAAAGCGTGCAAGATCTTGA+TGG | 0.464561 | 7.2:-43861417 | MS.gene46003:CDS |
CTACCTTCCATGGAGTTCCT+TGG | 0.467829 | 7.2:+43861351 | None:intergenic |
TGAGTCCAGAGAGATGTTTA+CGG | 0.491599 | 7.2:-43860595 | MS.gene46003:CDS |
GGTAAGATTGGTATTGGAAA+GGG | 0.492219 | 7.2:-43860824 | MS.gene46003:CDS |
TGGTTCCTTACTCCATATGT+AGG | 0.516443 | 7.2:+43860530 | None:intergenic |
CCATGGAAGGTAGTTGTAGC+AGG | 0.516445 | 7.2:-43861341 | MS.gene46003:CDS |
CCTGCTACAACTACCTTCCA+TGG | 0.518272 | 7.2:+43861341 | None:intergenic |
GGAGTGTTGCAAATGCTAGA+AGG | 0.519900 | 7.2:-43860668 | MS.gene46003:CDS |
GCAGATGCTGATAAAACTAC+TGG | 0.526501 | 7.2:-43860780 | MS.gene46003:CDS |
AATATCGATGCAGCTTAAAG+AGG | 0.527115 | 7.2:+43860640 | None:intergenic |
AAGTTATGGTGGACAAAGAA+AGG | 0.528542 | 7.2:-43861665 | MS.gene46003:CDS |
ACTCCAATGTCATCGTTTGA+TGG | 0.532598 | 7.2:-43860368 | MS.gene46003:CDS |
ACTCACCTAAGTAGTGTTTG+AGG | 0.535054 | 7.2:+43860133 | None:intergenic |
CAATGTAACTTCGTCAGCCA+TGG | 0.535493 | 7.2:+43861689 | None:intergenic |
TGTCGTTAATATTGGAGTGA+AGG | 0.536937 | 7.2:-43860294 | MS.gene46003:CDS |
AGTCTTGCAATAGTCCCTAA+AGG | 0.537586 | 7.2:+43861498 | None:intergenic |
GCTGTGTTTACTTCCAAAGA+AGG | 0.539163 | 7.2:-43860488 | MS.gene46003:CDS |
TCTGACCGTAAACATCTCTC+TGG | 0.540356 | 7.2:+43860590 | None:intergenic |
AGTCTTGCAATAGTCCCTAA+AGG | 0.541322 | 7.2:+43861576 | None:intergenic |
CGTTAATATTGGAGTGAAGG+AGG | 0.542677 | 7.2:-43860291 | MS.gene46003:intron |
CAGAGGAGTCTTCGAGAACA+AGG | 0.553892 | 7.2:+43860907 | None:intergenic |
AAACCCTCATCTGCATATGT+TGG | 0.555358 | 7.2:+43860860 | None:intergenic |
TCAACATCTGCTTTGACTAA+CGG | 0.558327 | 7.2:-43860156 | MS.gene46003:CDS |
GGGTAAGATTGGTATTGGAA+AGG | 0.563253 | 7.2:-43860825 | MS.gene46003:CDS |
CGACATATCCTCCAGAAACA+GGG | 0.570227 | 7.2:+43860432 | None:intergenic |
AAAGCGTGCAAGATCTTGAT+GGG | 0.571030 | 7.2:-43861416 | MS.gene46003:CDS |
GATTATGGTGACAGACGAGC+TGG | 0.571222 | 7.2:-43860396 | MS.gene46003:CDS |
GAAACCAACATATGCAGATG+AGG | 0.578230 | 7.2:-43860864 | MS.gene46003:CDS |
CCTACACTTCCAGTCGTCAC+AGG | 0.583036 | 7.2:+43861278 | None:intergenic |
TTCACATCTAGAAAGAATGA+AGG | 0.586950 | 7.2:-43860342 | MS.gene46003:CDS |
CCAATCTTACCCTCTTCAGA+TGG | 0.593770 | 7.2:+43860836 | None:intergenic |
GTTTCTGGAGGATATGTCGC+AGG | 0.594429 | 7.2:-43860428 | MS.gene46003:CDS |
AACGGCCTCAAACACTACTT+AGG | 0.596286 | 7.2:-43860138 | MS.gene46003:intron |
CCCAAATCCCCTGTTTCTGG+AGG | 0.597019 | 7.2:-43860440 | MS.gene46003:CDS |
TGAGGGTTTACCATCTGAAG+AGG | 0.598651 | 7.2:-43860846 | MS.gene46003:CDS |
ATCTGCTTACCCTCTTCAGA+TGG | 0.600894 | 7.2:+43860797 | None:intergenic |
TGGGAAATATCTATGGTCAA+AGG | 0.602410 | 7.2:-43861397 | MS.gene46003:CDS |
AGTATGTTACCTGTGACGAC+TGG | 0.606279 | 7.2:-43861287 | MS.gene46003:CDS |
ACTCAAGCCAAGGAACTCCA+TGG | 0.606428 | 7.2:-43861358 | MS.gene46003:CDS |
TTTAAGATAAAGTCTGTCAG+AGG | 0.610371 | 7.2:+43860890 | None:intergenic |
ACACCATCAAACGATGACAT+TGG | 0.611312 | 7.2:+43860365 | None:intergenic |
AAGAAATGCTACTCAAGCCA+AGG | 0.611550 | 7.2:-43861368 | MS.gene46003:CDS |
AAAGGGCTTACCATCTGAAG+AGG | 0.612181 | 7.2:-43860807 | MS.gene46003:CDS |
CATTCTGTTTGGTATAGCAG+AGG | 0.612193 | 7.2:-43860738 | MS.gene46003:CDS |
TACTTCCAAAGAAGGTGGTG+AGG | 0.612651 | 7.2:-43860480 | MS.gene46003:CDS |
TTTCCTCAATGTCATTTAGG+GGG | 0.620430 | 7.2:+43860318 | None:intergenic |
AGGGACTATTGCAAGACTAG+TGG | 0.623463 | 7.2:-43861493 | MS.gene46003:CDS |
AGGGACTATTGCAAGACTAG+TGG | 0.623463 | 7.2:-43861571 | MS.gene46003:CDS |
CCTGTGACGACTGGAAGTGT+AGG | 0.626530 | 7.2:-43861278 | MS.gene46003:CDS |
ATTTCCTCAATGTCATTTAG+GGG | 0.628156 | 7.2:+43860317 | None:intergenic |
GTGTTTACTTCCAAAGAAGG+TGG | 0.630600 | 7.2:-43860485 | MS.gene46003:CDS |
AGTTACATTGAAAGTTATGG+TGG | 0.634199 | 7.2:-43861676 | MS.gene46003:CDS |
AAACCAACATATGCAGATGA+GGG | 0.636295 | 7.2:-43860863 | MS.gene46003:CDS |
AAGCCAAGGAACTCCATGGA+AGG | 0.641089 | 7.2:-43861354 | MS.gene46003:CDS |
GAGGGTTTACCATCTGAAGA+GGG | 0.655984 | 7.2:-43860845 | MS.gene46003:CDS |
TCACAGGTAACATACTCCAC+CGG | 0.657623 | 7.2:+43861294 | None:intergenic |
ACTGAACATCGATGACACAC+CGG | 0.657838 | 7.2:-43861313 | MS.gene46003:CDS |
AAGGGCTTACCATCTGAAGA+GGG | 0.666261 | 7.2:-43860806 | MS.gene46003:CDS |
GACATATCCTCCAGAAACAG+GGG | 0.686488 | 7.2:+43860433 | None:intergenic |
GAACATCGATGACACACCGG+TGG | 0.687725 | 7.2:-43861310 | MS.gene46003:CDS |
GTTAGTCAAAGCAGATGTTG+AGG | 0.693625 | 7.2:+43860158 | None:intergenic |
ATTTGCAACACTCCTCCGAG+CGG | 0.720420 | 7.2:+43860677 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | TGTAAAAATTTATATTTCCA+AGG | + | chr7.2:43860699-43860718 | None:intergenic | 15.0% |
!!! | AATTTCTATATTTTTATCAC+TGG | - | chr7.2:43859708-43859727 | MS.gene46003:intron | 15.0% |
!! | ACGTAATTATCTAAAGATAA+AGG | + | chr7.2:43860817-43860836 | None:intergenic | 20.0% |
!! | AGTAATTAAAAACGAACAAA+AGG | - | chr7.2:43861501-43861520 | MS.gene46003:CDS | 20.0% |
!! | ATATCTATGTTTATATGTGT+AGG | - | chr7.2:43859749-43859768 | MS.gene46003:intron | 20.0% |
!!! | TAGCTTAATTTTTCTTCTTT+TGG | + | chr7.2:43861378-43861397 | None:intergenic | 20.0% |
!!! | TATAAGCTTAATTTTTCCAT+AGG | + | chr7.2:43861408-43861427 | None:intergenic | 20.0% |
! | AAGAAGAAAAATTAAGCTAG+AGG | - | chr7.2:43861379-43861398 | MS.gene46003:CDS | 25.0% |
! | AATATCGAAGCAATGAAATT+TGG | - | chr7.2:43859163-43859182 | MS.gene46003:intron | 25.0% |
! | AGTAAGTTTGCATTAAAAAG+TGG | + | chr7.2:43860747-43860766 | None:intergenic | 25.0% |
! | CAAGGCAAAATTTCATTTAA+AGG | + | chr7.2:43860681-43860700 | None:intergenic | 25.0% |
! | GAAAGATTGAAATGTAAGAA+GGG | - | chr7.2:43861142-43861161 | MS.gene46003:intron | 25.0% |
! | GAACATAGAAAAAAGAAAGA+AGG | - | chr7.2:43861117-43861136 | MS.gene46003:intron | 25.0% |
! | GCTTATAACTGTATGTATAT+TGG | - | chr7.2:43861421-43861440 | MS.gene46003:CDS | 25.0% |
! | TATGATTATTAAAGCTAACG+TGG | - | chr7.2:43861047-43861066 | MS.gene46003:intron | 25.0% |
! | TGAAAGATTGAAATGTAAGA+AGG | - | chr7.2:43861141-43861160 | MS.gene46003:intron | 25.0% |
! | TGTACATGCACATATAATAA+AGG | + | chr7.2:43861613-43861632 | None:intergenic | 25.0% |
! | TTATTATATGTGCATGTACA+TGG | - | chr7.2:43861613-43861632 | MS.gene46003:CDS | 25.0% |
! | TTTAACAAATCCATTGTCAA+AGG | + | chr7.2:43859524-43859543 | None:intergenic | 25.0% |
!! | AATTTCCTCAATGTCATTTA+GGG | + | chr7.2:43860387-43860406 | None:intergenic | 25.0% |
!! | ATAATTTGTATCTATGGTGA+TGG | - | chr7.2:43860486-43860505 | MS.gene46003:CDS | 25.0% |
!! | CTTTAAATGAAATTTTGCCT+TGG | - | chr7.2:43860679-43860698 | MS.gene46003:CDS | 25.0% |
!! | GATTGCATAATTTGTATCTA+TGG | - | chr7.2:43860480-43860499 | MS.gene46003:CDS | 25.0% |
!! | TCTTGTTAACAGTATTGAAT+TGG | - | chr7.2:43861225-43861244 | MS.gene46003:intron | 25.0% |
!!! | CAATGGATTTGTTAAAGATA+CGG | - | chr7.2:43859528-43859547 | MS.gene46003:intron | 25.0% |
!!! | TGATCTTTTTTCCTTAATCA+TGG | - | chr7.2:43861193-43861212 | MS.gene46003:intron | 25.0% |
AAGAGAGAAAATCAAGAAAG+GGG | - | chr7.2:43861165-43861184 | MS.gene46003:intron | 30.0% | |
AATGATCTAGTAAAAGGTCT+AGG | - | chr7.2:43859589-43859608 | MS.gene46003:intron | 30.0% | |
AGTTACATTGAAAGTTATGG+TGG | - | chr7.2:43859024-43859043 | MS.gene46003:CDS | 30.0% | |
ATCTTGATGGGAAATATCTA+TGG | - | chr7.2:43859296-43859315 | MS.gene46003:intron | 30.0% | |
ATGCCTAATGATCTAGTAAA+AGG | - | chr7.2:43859583-43859602 | MS.gene46003:intron | 30.0% | |
CCATATGTAGGAAAAATTTG+AGG | + | chr7.2:43860161-43860180 | None:intergenic | 30.0% | |
CGAAGTTACATTGAAAGTTA+TGG | - | chr7.2:43859021-43859040 | MS.gene46003:CDS | 30.0% | |
GAAGAGAGAAAATCAAGAAA+GGG | - | chr7.2:43861164-43861183 | MS.gene46003:intron | 30.0% | |
GAGGAAATTGTCGTTAATAT+TGG | - | chr7.2:43860398-43860417 | MS.gene46003:CDS | 30.0% | |
GTATATGGTATGAAGTATAC+CGG | - | chr7.2:43861289-43861308 | MS.gene46003:CDS | 30.0% | |
TCAACTAGAAACATTCTGTT+TGG | - | chr7.2:43859951-43859970 | MS.gene46003:intron | 30.0% | |
TCATATGATCTAAGGGTAAT+GGG | - | chr7.2:43861448-43861467 | MS.gene46003:CDS | 30.0% | |
TCTCGTCGTACATTATAATT+AGG | - | chr7.2:43860615-43860634 | MS.gene46003:CDS | 30.0% | |
TGGATGTTCATATGATCTAA+GGG | - | chr7.2:43861441-43861460 | MS.gene46003:CDS | 30.0% | |
TTCACATCTAGAAAGAATGA+AGG | - | chr7.2:43860358-43860377 | MS.gene46003:CDS | 30.0% | |
TTCATATGATCTAAGGGTAA+TGG | - | chr7.2:43861447-43861466 | MS.gene46003:CDS | 30.0% | |
TTGGATGTTCATATGATCTA+AGG | - | chr7.2:43861440-43861459 | MS.gene46003:CDS | 30.0% | |
! | AGACCTTTTACTAGATCATT+AGG | + | chr7.2:43859589-43859608 | None:intergenic | 30.0% |
! | ATTTCCTCAATGTCATTTAG+GGG | + | chr7.2:43860386-43860405 | None:intergenic | 30.0% |
! | CAATTTCCTCAATGTCATTT+AGG | + | chr7.2:43860388-43860407 | None:intergenic | 30.0% |
! | CCTCAAATTTTTCCTACATA+TGG | - | chr7.2:43860158-43860177 | MS.gene46003:CDS | 30.0% |
! | TTCTACCTTTTGCTTCTTTA+GGG | + | chr7.2:43861684-43861703 | None:intergenic | 30.0% |
! | TTTAAGATAAAGTCTGTCAG+AGG | + | chr7.2:43859813-43859832 | None:intergenic | 30.0% |
! | TTTCTACCTTTTGCTTCTTT+AGG | + | chr7.2:43861685-43861704 | None:intergenic | 30.0% |
! | TTTTTCCTACATATGGAGTA+AGG | - | chr7.2:43860165-43860184 | MS.gene46003:CDS | 30.0% |
!! | ACGACGAGATTTTGATAATT+TGG | + | chr7.2:43860604-43860623 | None:intergenic | 30.0% |
!!! | CTGTTTTGATTGGTAAAATC+TGG | + | chr7.2:43860193-43860212 | None:intergenic | 30.0% |
AAACCAACATATGCAGATGA+GGG | - | chr7.2:43859837-43859856 | MS.gene46003:intron | 35.0% | |
AAATCCATTGTCAAAGGAAC+TGG | + | chr7.2:43859518-43859537 | None:intergenic | 35.0% | |
AACACTACTTATCAGCAAGA+AGG | - | chr7.2:43859660-43859679 | MS.gene46003:intron | 35.0% | |
AATATCGATGCAGCTTAAAG+AGG | + | chr7.2:43860063-43860082 | None:intergenic | 35.0% | |
AATCCATTGTCAAAGGAACT+GGG | + | chr7.2:43859517-43859536 | None:intergenic | 35.0% | |
ACACTTTAACCAATGCCTTA+AGG | - | chr7.2:43860774-43860793 | MS.gene46003:CDS | 35.0% | |
AGCTTCTTAACATTGCCTTT+AGG | - | chr7.2:43859109-43859128 | MS.gene46003:intron | 35.0% | |
ATTAAGCTAGAGGAAACCTA+TGG | - | chr7.2:43861389-43861408 | MS.gene46003:CDS | 35.0% | |
CACTTTAACCAATGCCTTAA+GGG | - | chr7.2:43860775-43860794 | MS.gene46003:CDS | 35.0% | |
CATATGATCTAAGGGTAATG+GGG | - | chr7.2:43861449-43861468 | MS.gene46003:CDS | 35.0% | |
CTAATGCATGCTTTAACAGA+TGG | - | chr7.2:43861330-43861349 | MS.gene46003:CDS | 35.0% | |
GAAACAAGTCACCATGATTA+AGG | + | chr7.2:43861207-43861226 | None:intergenic | 35.0% | |
GATCACAAATTAGACAGAAC+CGG | + | chr7.2:43861311-43861330 | None:intergenic | 35.0% | |
GCTTCTTAACATTGCCTTTA+GGG | - | chr7.2:43859110-43859129 | MS.gene46003:intron | 35.0% | |
GGAAGAGAGAAAATCAAGAA+AGG | - | chr7.2:43861163-43861182 | MS.gene46003:intron | 35.0% | |
TAGTTTGGTCTAGTAGCTAA+GGG | - | chr7.2:43860896-43860915 | MS.gene46003:CDS | 35.0% | |
TATGTGTGTGTGTGTGTATA+TGG | - | chr7.2:43861274-43861293 | MS.gene46003:CDS | 35.0% | |
TCAACATCTGCTTTGACTAA+CGG | - | chr7.2:43860544-43860563 | MS.gene46003:CDS | 35.0% | |
TGGGAAATATCTATGGTCAA+AGG | - | chr7.2:43859303-43859322 | MS.gene46003:intron | 35.0% | |
TGTCGTTAATATTGGAGTGA+AGG | - | chr7.2:43860406-43860425 | MS.gene46003:CDS | 35.0% | |
TGTTACAATACCTTCCACAA+AGG | + | chr7.2:43859480-43859499 | None:intergenic | 35.0% | |
! | ATGTAGGAAAAATTTGAGGC+TGG | + | chr7.2:43860157-43860176 | None:intergenic | 35.0% |
! | GGTAAGATTGGTATTGGAAA+GGG | - | chr7.2:43859876-43859895 | MS.gene46003:intron | 35.0% |
! | TATAGCAGAGGAAGATTTTG+CGG | - | chr7.2:43859974-43859993 | MS.gene46003:intron | 35.0% |
! | TCTACCTTTTGCTTCTTTAG+GGG | + | chr7.2:43861683-43861702 | None:intergenic | 35.0% |
! | TTTCCTCAATGTCATTTAGG+GGG | + | chr7.2:43860385-43860404 | None:intergenic | 35.0% |
!! | AAGTTATGGTGGACAAAGAA+AGG | - | chr7.2:43859035-43859054 | MS.gene46003:CDS | 35.0% |
!!! | GTAAACACAGCTGTTTTGAT+TGG | + | chr7.2:43860203-43860222 | None:intergenic | 35.0% |
!!! | TTTCTTCTTTTGGCTTCTTC+AGG | + | chr7.2:43861368-43861387 | None:intergenic | 35.0% |
AAACCCTCATCTGCATATGT+TGG | + | chr7.2:43859843-43859862 | None:intergenic | 40.0% | |
AAAGCGTGCAAGATCTTGAT+GGG | - | chr7.2:43859284-43859303 | MS.gene46003:intron | 40.0% | |
AAGAAATGCTACTCAAGCCA+AGG | - | chr7.2:43859332-43859351 | MS.gene46003:intron | 40.0% | |
AAGAGAGTGACAGTCATGAA+GGG | - | chr7.2:43861533-43861552 | MS.gene46003:CDS | 40.0% | |
AATGCTAATGAGTGCCCTTA+AGG | + | chr7.2:43860792-43860811 | None:intergenic | 40.0% | |
ACACCATCAAACGATGACAT+TGG | + | chr7.2:43860338-43860357 | None:intergenic | 40.0% | |
ACTACTTATCAGCAAGAAGG+AGG | - | chr7.2:43859663-43859682 | MS.gene46003:intron | 40.0% | |
ACTCACCTAAGTAGTGTTTG+AGG | + | chr7.2:43860570-43860589 | None:intergenic | 40.0% | |
ACTCCAATGTCATCGTTTGA+TGG | - | chr7.2:43860332-43860351 | MS.gene46003:CDS | 40.0% | |
AGCATTAGCTCACTTCCTTT+AGG | - | chr7.2:43859187-43859206 | MS.gene46003:intron | 40.0% | |
AGCTAACGTGGAACATATAG+AGG | - | chr7.2:43861059-43861078 | MS.gene46003:intron | 40.0% | |
AGTCTTGCAATAGTCCCTAA+AGG | + | chr7.2:43859127-43859146 | None:intergenic | 40.0% | |
ATCAGAAATGCCTTTGTGGA+AGG | - | chr7.2:43859467-43859486 | MS.gene46003:intron | 40.0% | |
ATTCCTTAATCGTTGCCCTT+AGG | + | chr7.2:43860658-43860677 | None:intergenic | 40.0% | |
CATTCTGTTTGGTATAGCAG+AGG | - | chr7.2:43859962-43859981 | MS.gene46003:intron | 40.0% | |
CGTTAATATTGGAGTGAAGG+AGG | - | chr7.2:43860409-43860428 | MS.gene46003:CDS | 40.0% | |
CTTGCTAACTAGTGTCCTAA+GGG | - | chr7.2:43860640-43860659 | MS.gene46003:CDS | 40.0% | |
GAAACCAACATATGCAGATG+AGG | - | chr7.2:43859836-43859855 | MS.gene46003:intron | 40.0% | |
GAAGAGGGTAAGATTGGTAT+TGG | - | chr7.2:43859870-43859889 | MS.gene46003:intron | 40.0% | |
GCAGATGCTGATAAAACTAC+TGG | - | chr7.2:43859920-43859939 | MS.gene46003:intron | 40.0% | |
GCATTAGCTCACTTCCTTTA+GGG | - | chr7.2:43859188-43859207 | MS.gene46003:intron | 40.0% | |
GCTGTGTTTACTTCCAAAGA+AGG | - | chr7.2:43860212-43860231 | MS.gene46003:intron | 40.0% | |
GTAGTTTGGTCTAGTAGCTA+AGG | - | chr7.2:43860895-43860914 | MS.gene46003:CDS | 40.0% | |
GTGTTTACTTCCAAAGAAGG+TGG | - | chr7.2:43860215-43860234 | MS.gene46003:intron | 40.0% | |
GTTAGTCAAAGCAGATGTTG+AGG | + | chr7.2:43860545-43860564 | None:intergenic | 40.0% | |
TATATGTGCATGTACATGGC+AGG | - | chr7.2:43861617-43861636 | MS.gene46003:CDS | 40.0% | |
TCTGTCACCATAATCGTTGT+TGG | + | chr7.2:43860299-43860318 | None:intergenic | 40.0% | |
TCTTGCTAACTAGTGTCCTA+AGG | - | chr7.2:43860639-43860658 | MS.gene46003:CDS | 40.0% | |
TGAGTCCAGAGAGATGTTTA+CGG | - | chr7.2:43860105-43860124 | MS.gene46003:intron | 40.0% | |
TGGTTCCTTACTCCATATGT+AGG | + | chr7.2:43860173-43860192 | None:intergenic | 40.0% | |
! | CTACCTTTTGCTTCTTTAGG+GGG | + | chr7.2:43861682-43861701 | None:intergenic | 40.0% |
! | GGAAGTCTGTGAGTCTTTTT+CGG | - | chr7.2:43859443-43859462 | MS.gene46003:intron | 40.0% |
! | GGGTAAGATTGGTATTGGAA+AGG | - | chr7.2:43859875-43859894 | MS.gene46003:intron | 40.0% |
! | TCATGAAGGGTGTGTAATCT+TGG | - | chr7.2:43861546-43861565 | MS.gene46003:CDS | 40.0% |
!! | AGTTTTCTCACTTTTCCGCT+CGG | - | chr7.2:43860008-43860027 | MS.gene46003:intron | 40.0% |
!! | TGTGGAAGGTATTGTAACAG+TGG | - | chr7.2:43859481-43859500 | MS.gene46003:intron | 40.0% |
AAAGGGCTTACCATCTGAAG+AGG | - | chr7.2:43859893-43859912 | MS.gene46003:intron | 45.0% | |
AACGGCCTCAAACACTACTT+AGG | - | chr7.2:43860562-43860581 | MS.gene46003:CDS | 45.0% | |
AAGGGCTTACCATCTGAAGA+GGG | - | chr7.2:43859894-43859913 | MS.gene46003:intron | 45.0% | |
AATGAGTGCCCTTAAGGCAT+TGG | + | chr7.2:43860786-43860805 | None:intergenic | 45.0% | |
ACTGAACATCGATGACACAC+CGG | - | chr7.2:43859387-43859406 | MS.gene46003:intron | 45.0% | |
AGGGACTATTGCAAGACTAG+TGG | - | chr7.2:43859129-43859148 | MS.gene46003:intron | 45.0% | |
AGTATGTTACCTGTGACGAC+TGG | - | chr7.2:43859413-43859432 | MS.gene46003:intron | 45.0% | |
ATCTGCTTACCCTCTTCAGA+TGG | + | chr7.2:43859906-43859925 | None:intergenic | 45.0% | |
ATTGTCAAAGGAACTGGGAC+AGG | + | chr7.2:43859512-43859531 | None:intergenic | 45.0% | |
CAAAGCGTGCAAGATCTTGA+TGG | - | chr7.2:43859283-43859302 | MS.gene46003:intron | 45.0% | |
CCAAACTACCTACTACTGCT+TGG | + | chr7.2:43860884-43860903 | None:intergenic | 45.0% | |
CCAAGCAGTAGTAGGTAGTT+TGG | - | chr7.2:43860881-43860900 | MS.gene46003:CDS | 45.0% | |
CCAATCTTACCCTCTTCAGA+TGG | + | chr7.2:43859867-43859886 | None:intergenic | 45.0% | |
CCATCTGAAGAGGGTAAGAT+TGG | - | chr7.2:43859864-43859883 | MS.gene46003:intron | 45.0% | |
CGACATATCCTCCAGAAACA+GGG | + | chr7.2:43860271-43860290 | None:intergenic | 45.0% | |
CGGTATCAGAAATGCCTTTG+TGG | - | chr7.2:43859463-43859482 | MS.gene46003:intron | 45.0% | |
CTAGGTTTACTGCAGACGAA+TGG | - | chr7.2:43859607-43859626 | MS.gene46003:intron | 45.0% | |
GAAGAGAGTGACAGTCATGA+AGG | - | chr7.2:43861532-43861551 | MS.gene46003:CDS | 45.0% | |
GACATATCCTCCAGAAACAG+GGG | + | chr7.2:43860270-43860289 | None:intergenic | 45.0% | |
GAGGGTTTACCATCTGAAGA+GGG | - | chr7.2:43859855-43859874 | MS.gene46003:intron | 45.0% | |
TACTTCCAAAGAAGGTGGTG+AGG | - | chr7.2:43860220-43860239 | MS.gene46003:intron | 45.0% | |
TAGCCCCCTAAAGAAGCAAA+AGG | - | chr7.2:43861676-43861695 | MS.gene46003:CDS | 45.0% | |
TCACAGGTAACATACTCCAC+CGG | + | chr7.2:43859409-43859428 | None:intergenic | 45.0% | |
TCTGACCGTAAACATCTCTC+TGG | + | chr7.2:43860113-43860132 | None:intergenic | 45.0% | |
TGAGGGTTTACCATCTGAAG+AGG | - | chr7.2:43859854-43859873 | MS.gene46003:intron | 45.0% | |
TGTCCCAGTTCCTTTGACAA+TGG | - | chr7.2:43859511-43859530 | MS.gene46003:intron | 45.0% | |
TGTCCTAAGGGCAACGATTA+AGG | - | chr7.2:43860652-43860671 | MS.gene46003:CDS | 45.0% | |
!! | GAACAGAGTTTTGTACGCTG+AGG | - | chr7.2:43859057-43859076 | MS.gene46003:CDS | 45.0% |
!! | GCTTCTTCAGGTTGCTAACT+GGG | + | chr7.2:43861356-43861375 | None:intergenic | 45.0% |
!! | GGAGTGTTGCAAATGCTAGA+AGG | - | chr7.2:43860032-43860051 | MS.gene46003:intron | 45.0% |
!! | GTATCTATGGTGATGGTGCA+GGG | - | chr7.2:43860493-43860512 | MS.gene46003:CDS | 45.0% |
!! | TCTAAGGGTAATGGGGAGTA+AGG | - | chr7.2:43861456-43861475 | MS.gene46003:CDS | 45.0% |
!! | TGTATCTATGGTGATGGTGC+AGG | - | chr7.2:43860492-43860511 | MS.gene46003:CDS | 45.0% |
AAGCCAAGGAACTCCATGGA+AGG | - | chr7.2:43859346-43859365 | MS.gene46003:intron | 50.0% | |
ACTCAAGCCAAGGAACTCCA+TGG | - | chr7.2:43859342-43859361 | MS.gene46003:intron | 50.0% | |
ACTCCTGTCCAAGCAGTAGT+AGG | - | chr7.2:43860873-43860892 | MS.gene46003:CDS | 50.0% | |
ATTTGCAACACTCCTCCGAG+CGG | + | chr7.2:43860026-43860045 | None:intergenic | 50.0% | |
CAAGACCTCACCACCTTCTT+TGG | + | chr7.2:43860228-43860247 | None:intergenic | 50.0% | |
CAGAGGAGTCTTCGAGAACA+AGG | + | chr7.2:43859796-43859815 | None:intergenic | 50.0% | |
CCATGGAAGGTAGTTGTAGC+AGG | - | chr7.2:43859359-43859378 | MS.gene46003:intron | 50.0% | |
CCTCCAGAAACAGGGGATTT+GGG | + | chr7.2:43860263-43860282 | None:intergenic | 50.0% | |
CCTGCTACAACTACCTTCCA+TGG | + | chr7.2:43859362-43859381 | None:intergenic | 50.0% | |
CGCAGGACCAACAACGATTA+TGG | - | chr7.2:43860289-43860308 | MS.gene46003:intron | 50.0% | |
CTACCTACTACTGCTTGGAC+AGG | + | chr7.2:43860879-43860898 | None:intergenic | 50.0% | |
CTACCTTCCATGGAGTTCCT+TGG | + | chr7.2:43859352-43859371 | None:intergenic | 50.0% | |
GATCCCAAATCCCCTGTTTC+TGG | - | chr7.2:43860257-43860276 | MS.gene46003:intron | 50.0% | |
GATTATGGTGACAGACGAGC+TGG | - | chr7.2:43860304-43860323 | MS.gene46003:CDS | 50.0% | |
GCGACATATCCTCCAGAAAC+AGG | + | chr7.2:43860272-43860291 | None:intergenic | 50.0% | |
GGCAGGAAGTAGATCTGTTC+AGG | - | chr7.2:43861634-43861653 | MS.gene46003:CDS | 50.0% | |
GGGTGTGTAATCTTGGCAAC+TGG | - | chr7.2:43861553-43861572 | MS.gene46003:CDS | 50.0% | |
GGTCCCCCTAAATGACATTG+AGG | - | chr7.2:43860379-43860398 | MS.gene46003:CDS | 50.0% | |
TCCTCCAGAAACAGGGGATT+TGG | + | chr7.2:43860264-43860283 | None:intergenic | 50.0% | |
! | AGAAGGAGGCATGCTTTCTC+TGG | - | chr7.2:43859677-43859696 | MS.gene46003:intron | 50.0% |
! | GTTTCTGGAGGATATGTCGC+AGG | - | chr7.2:43860272-43860291 | MS.gene46003:intron | 50.0% |
!! | AGAGTTTTGTACGCTGAGGC+TGG | - | chr7.2:43859061-43859080 | MS.gene46003:CDS | 50.0% |
!! | GAGTTTTGTACGCTGAGGCT+GGG | - | chr7.2:43859062-43859081 | MS.gene46003:CDS | 50.0% |
!! | GGCTTCTTCAGGTTGCTAAC+TGG | + | chr7.2:43861357-43861376 | None:intergenic | 50.0% |
!! | TTTCTCACTTTTCCGCTCGG+AGG | - | chr7.2:43860011-43860030 | MS.gene46003:intron | 50.0% |
CCTACACTTCCAGTCGTCAC+AGG | + | chr7.2:43859425-43859444 | None:intergenic | 55.0% | |
GAACATCGATGACACACCGG+TGG | - | chr7.2:43859390-43859409 | MS.gene46003:intron | 55.0% | |
! | CCTGTGACGACTGGAAGTGT+AGG | - | chr7.2:43859422-43859441 | MS.gene46003:intron | 55.0% |
!! | CCCAAATCCCCTGTTTCTGG+AGG | - | chr7.2:43860260-43860279 | MS.gene46003:intron | 55.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr7.2 | gene | 43859013 | 43861709 | 43859013 | ID=MS.gene46003 |
chr7.2 | mRNA | 43859013 | 43861709 | 43859013 | ID=MS.gene46003.t1;Parent=MS.gene46003 |
chr7.2 | exon | 43861272 | 43861709 | 43861272 | ID=MS.gene46003.t1.exon1;Parent=MS.gene46003.t1 |
chr7.2 | CDS | 43861272 | 43861709 | 43861272 | ID=cds.MS.gene46003.t1;Parent=MS.gene46003.t1 |
chr7.2 | exon | 43860292 | 43860951 | 43860292 | ID=MS.gene46003.t1.exon2;Parent=MS.gene46003.t1 |
chr7.2 | CDS | 43860292 | 43860951 | 43860292 | ID=cds.MS.gene46003.t1;Parent=MS.gene46003.t1 |
chr7.2 | exon | 43860139 | 43860208 | 43860139 | ID=MS.gene46003.t1.exon3;Parent=MS.gene46003.t1 |
chr7.2 | CDS | 43860139 | 43860208 | 43860139 | ID=cds.MS.gene46003.t1;Parent=MS.gene46003.t1 |
chr7.2 | exon | 43859013 | 43859083 | 43859013 | ID=MS.gene46003.t1.exon4;Parent=MS.gene46003.t1 |
chr7.2 | CDS | 43859013 | 43859083 | 43859013 | ID=cds.MS.gene46003.t1;Parent=MS.gene46003.t1 |
Gene Sequence |
Protein sequence |