Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene73353.t1 | XP_013448987.1 | 39.4 | 464 | 245 | 6 | 114 | 543 | 8 | 469 | 1.10E-81 | 314.3 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene73353.t1 | A0A072TZR8 | 39.4 | 464 | 245 | 6 | 114 | 543 | 8 | 469 | 8.0e-82 | 314.3 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene73353.t1 | MTR_7g063840 | 39.270 | 466 | 247 | 6 | 112 | 543 | 6 | 469 | 2.20e-103 | 319 |
MS.gene73353.t1 | MTR_7g063820 | 40.496 | 484 | 235 | 14 | 107 | 542 | 1 | 479 | 7.37e-96 | 300 |
MS.gene73353.t1 | MTR_7g062280 | 36.640 | 494 | 249 | 8 | 107 | 543 | 1 | 487 | 4.43e-90 | 285 |
MS.gene73353.t1 | MTR_7g063900 | 39.549 | 488 | 240 | 10 | 107 | 543 | 1 | 484 | 4.66e-90 | 285 |
MS.gene73353.t1 | MTR_7g063830 | 38.115 | 488 | 207 | 12 | 107 | 545 | 1 | 442 | 4.10e-88 | 279 |
MS.gene73353.t1 | MTR_7g063660 | 38.004 | 471 | 245 | 12 | 115 | 543 | 8 | 473 | 2.21e-87 | 278 |
MS.gene73353.t1 | MTR_7g063660 | 27.556 | 225 | 147 | 7 | 320 | 534 | 4 | 222 | 7.11e-12 | 68.2 |
MS.gene73353.t1 | MTR_7g062300 | 38.217 | 471 | 237 | 12 | 114 | 539 | 10 | 471 | 7.61e-86 | 274 |
MS.gene73353.t1 | MTR_7g063880 | 38.983 | 472 | 239 | 11 | 111 | 543 | 3 | 464 | 7.27e-84 | 269 |
MS.gene73353.t1 | MTR_7g100420 | 55.720 | 271 | 114 | 4 | 283 | 548 | 134 | 403 | 9.63e-83 | 264 |
MS.gene73353.t1 | MTR_7g100420 | 71.429 | 49 | 14 | 0 | 111 | 159 | 34 | 82 | 9.25e-13 | 70.5 |
MS.gene73353.t1 | MTR_7g063890 | 39.463 | 484 | 241 | 11 | 110 | 543 | 19 | 500 | 2.17e-80 | 261 |
MS.gene73353.t1 | MTR_7g063920 | 37.416 | 449 | 246 | 9 | 111 | 543 | 3 | 432 | 2.97e-77 | 250 |
MS.gene73353.t1 | MTR_3g007740 | 34.454 | 476 | 236 | 11 | 109 | 542 | 2 | 443 | 1.04e-72 | 239 |
MS.gene73353.t1 | MTR_7g066580 | 34.889 | 450 | 244 | 12 | 122 | 534 | 1 | 438 | 5.85e-67 | 224 |
MS.gene73353.t1 | MTR_7g066430 | 32.708 | 480 | 261 | 9 | 117 | 537 | 5 | 481 | 5.30e-66 | 223 |
MS.gene73353.t1 | MTR_7g063670 | 36.059 | 477 | 220 | 16 | 114 | 542 | 13 | 452 | 1.11e-65 | 221 |
MS.gene73353.t1 | MTR_7g066260 | 33.191 | 470 | 242 | 12 | 117 | 539 | 16 | 460 | 1.04e-61 | 211 |
MS.gene73353.t1 | MTR_7g066410 | 32.885 | 520 | 258 | 16 | 107 | 542 | 1 | 513 | 1.78e-61 | 211 |
MS.gene73353.t1 | MTR_7g066570 | 32.842 | 475 | 256 | 10 | 117 | 539 | 15 | 478 | 7.33e-61 | 211 |
MS.gene73353.t1 | MTR_7g012680 | 33.925 | 451 | 246 | 14 | 117 | 538 | 15 | 442 | 1.42e-59 | 204 |
MS.gene73353.t1 | MTR_7g058710 | 28.926 | 484 | 270 | 11 | 117 | 543 | 13 | 479 | 1.87e-54 | 191 |
MS.gene73353.t1 | MTR_7g066340 | 32.189 | 466 | 246 | 11 | 117 | 539 | 13 | 451 | 9.88e-54 | 189 |
MS.gene73353.t1 | MTR_7g066340 | 33.333 | 168 | 101 | 4 | 325 | 483 | 12 | 177 | 3.16e-16 | 81.6 |
MS.gene73353.t1 | MTR_7g066310 | 32.564 | 433 | 223 | 11 | 117 | 539 | 8 | 381 | 1.12e-53 | 187 |
MS.gene73353.t1 | MTR_7g066310 | 35.398 | 113 | 68 | 1 | 325 | 432 | 7 | 119 | 1.76e-12 | 69.7 |
MS.gene73353.t1 | MTR_7g066350 | 32.150 | 479 | 242 | 11 | 117 | 546 | 10 | 454 | 1.45e-53 | 188 |
MS.gene73353.t1 | MTR_7g066350 | 32.314 | 229 | 125 | 10 | 325 | 534 | 9 | 226 | 2.05e-15 | 79.3 |
MS.gene73353.t1 | MTR_1g041315 | 31.237 | 477 | 243 | 13 | 105 | 525 | 4 | 451 | 1.37e-52 | 186 |
MS.gene73353.t1 | MTR_7g066290 | 30.983 | 468 | 226 | 10 | 117 | 539 | 16 | 431 | 3.14e-49 | 176 |
MS.gene73353.t1 | MTR_3g065200 | 31.637 | 452 | 226 | 12 | 117 | 530 | 4 | 410 | 1.34e-48 | 175 |
MS.gene73353.t1 | MTR_7g063720 | 41.322 | 242 | 123 | 5 | 306 | 543 | 2 | 228 | 5.62e-48 | 167 |
MS.gene73353.t1 | MTR_7g066360 | 33.333 | 468 | 230 | 16 | 117 | 538 | 15 | 446 | 6.11e-48 | 174 |
MS.gene73353.t1 | MTR_7g066400 | 28.661 | 478 | 267 | 11 | 107 | 546 | 1 | 442 | 1.03e-46 | 169 |
MS.gene73353.t1 | MTR_1g014060 | 30.733 | 423 | 236 | 16 | 125 | 539 | 9 | 382 | 1.71e-44 | 162 |
MS.gene73353.t1 | MTR_2g029400 | 30.594 | 438 | 251 | 14 | 106 | 529 | 5 | 403 | 2.34e-44 | 162 |
MS.gene73353.t1 | MTR_4g019310 | 28.512 | 484 | 281 | 10 | 119 | 541 | 11 | 490 | 3.28e-42 | 158 |
MS.gene73353.t1 | MTR_7g066490 | 30.786 | 458 | 219 | 17 | 112 | 537 | 12 | 403 | 3.43e-41 | 154 |
MS.gene73353.t1 | MTR_7g066480 | 29.560 | 477 | 222 | 16 | 113 | 542 | 13 | 422 | 9.33e-39 | 147 |
MS.gene73353.t1 | MTR_7g058700 | 25.849 | 530 | 245 | 12 | 83 | 542 | 471 | 922 | 1.15e-37 | 149 |
MS.gene73353.t1 | MTR_4g017830 | 27.642 | 492 | 286 | 14 | 115 | 539 | 11 | 499 | 1.19e-37 | 146 |
MS.gene73353.t1 | MTR_4g019340 | 27.975 | 479 | 267 | 15 | 115 | 529 | 37 | 501 | 4.49e-34 | 135 |
MS.gene73353.t1 | MTR_4g017440 | 26.358 | 497 | 299 | 13 | 115 | 546 | 13 | 507 | 1.68e-33 | 134 |
MS.gene73353.t1 | MTR_4g017470 | 26.458 | 480 | 286 | 14 | 115 | 544 | 11 | 473 | 4.13e-31 | 127 |
MS.gene73353.t1 | MTR_7g063850 | 35.417 | 288 | 169 | 8 | 261 | 543 | 9 | 284 | 8.04e-30 | 119 |
MS.gene73353.t1 | MTR_4g017610 | 25.482 | 467 | 295 | 11 | 115 | 534 | 12 | 472 | 3.45e-29 | 120 |
MS.gene73353.t1 | MTR_7g062270 | 37.059 | 170 | 102 | 3 | 107 | 273 | 1 | 168 | 7.15e-29 | 118 |
MS.gene73353.t1 | MTR_7g062270 | 29.744 | 195 | 92 | 7 | 329 | 499 | 14 | 187 | 5.99e-12 | 67.8 |
MS.gene73353.t1 | MTR_8g023240 | 23.762 | 505 | 287 | 15 | 93 | 533 | 11 | 481 | 2.70e-28 | 119 |
MS.gene73353.t1 | MTR_4g017410 | 25.051 | 491 | 296 | 13 | 115 | 544 | 8 | 487 | 7.36e-28 | 117 |
MS.gene73353.t1 | MTR_7g066680 | 30.255 | 314 | 163 | 8 | 281 | 546 | 35 | 340 | 2.38e-27 | 113 |
MS.gene73353.t1 | MTR_7g063690 | 33.071 | 254 | 130 | 8 | 106 | 352 | 2 | 222 | 1.09e-25 | 106 |
MS.gene73353.t1 | MTR_7g066280 | 28.053 | 303 | 180 | 7 | 261 | 539 | 100 | 388 | 2.97e-21 | 96.7 |
MS.gene73353.t1 | MTR_1g115440 | 27.928 | 222 | 148 | 4 | 325 | 534 | 11 | 232 | 7.01e-19 | 86.7 |
MS.gene73353.t1 | MTR_4g017550 | 24.638 | 483 | 280 | 17 | 130 | 541 | 4 | 473 | 1.85e-18 | 88.6 |
MS.gene73353.t1 | MTR_0150s0010 | 27.027 | 222 | 150 | 2 | 325 | 534 | 10 | 231 | 6.47e-17 | 80.9 |
MS.gene73353.t1 | MTR_8g445860 | 26.383 | 235 | 132 | 6 | 325 | 534 | 13 | 231 | 4.66e-15 | 75.5 |
MS.gene73353.t1 | MTR_8g445860 | 35.052 | 97 | 57 | 2 | 110 | 205 | 7 | 98 | 9.19e-11 | 62.8 |
MS.gene73353.t1 | MTR_1g115470 | 41.772 | 79 | 46 | 0 | 325 | 403 | 6 | 84 | 2.16e-11 | 66.6 |
MS.gene73353.t1 | MTR_1g115450 | 37.500 | 80 | 50 | 0 | 325 | 404 | 7 | 86 | 5.32e-11 | 61.2 |
MS.gene73353.t1 | MTR_1g115455 | 25.424 | 236 | 128 | 8 | 109 | 303 | 2 | 230 | 5.48e-11 | 63.2 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene73353.t1 | AT5G01120 | 25.714 | 490 | 287 | 10 | 114 | 537 | 7 | 485 | 2.85e-32 | 130 |
MS.gene73353.t1 | AT3G09140 | 25.692 | 506 | 275 | 15 | 109 | 534 | 2 | 486 | 1.71e-27 | 116 |
MS.gene73353.t1 | AT5G01130 | 24.421 | 475 | 281 | 8 | 109 | 539 | 2 | 442 | 3.61e-27 | 114 |
MS.gene73353.t1 | AT3G09110 | 26.885 | 305 | 182 | 5 | 119 | 383 | 12 | 315 | 2.44e-25 | 107 |
MS.gene73353.t1 | AT3G09120 | 25.705 | 319 | 173 | 6 | 115 | 379 | 5 | 313 | 1.83e-23 | 101 |
MS.gene73353.t1 | AT5G43240 | 24.335 | 489 | 293 | 11 | 117 | 537 | 10 | 489 | 2.14e-23 | 104 |
MS.gene73353.t1 | AT5G43240 | 24.335 | 489 | 293 | 11 | 117 | 537 | 10 | 489 | 2.14e-23 | 104 |
MS.gene73353.t1 | AT5G43240 | 24.335 | 489 | 293 | 11 | 117 | 537 | 10 | 489 | 2.14e-23 | 104 |
MS.gene73353.t1 | AT5G01140 | 22.689 | 476 | 285 | 11 | 109 | 534 | 2 | 444 | 4.22e-21 | 97.1 |
MS.gene73353.t1 | AT5G01150 | 25.150 | 334 | 203 | 6 | 109 | 396 | 2 | 334 | 5.62e-21 | 96.7 |
MS.gene73353.t1 | AT5G37320 | 24.748 | 497 | 276 | 15 | 121 | 545 | 13 | 483 | 3.83e-18 | 87.8 |
MS.gene73353.t1 | AT3G09140 | 35.000 | 120 | 78 | 0 | 109 | 228 | 2 | 121 | 2.55e-16 | 82.4 |
Find 106 sgRNAs with CRISPR-Local
Find 217 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TAAATTTCTGTTTCTCTCTT+TGG | 0.185176 | 7.2:-22990350 | MS.gene73353:CDS |
ACCAACAAGACTCTTATTTC+TGG | 0.210187 | 7.2:-22990273 | MS.gene73353:CDS |
TTTGGTTTCGTAGCTTAAAT+TGG | 0.222137 | 7.2:+22987433 | None:intergenic |
TATTTGAAATTGGCAAAATT+TGG | 0.223456 | 7.2:+22987415 | None:intergenic |
TTTCAAAACTTTCAATTTAC+AGG | 0.240294 | 7.2:-22987166 | MS.gene73353:CDS |
TACGTTGTCATATTTGAAAT+TGG | 0.261420 | 7.2:+22987405 | None:intergenic |
CAAATCACTAAGAGCCGATT+TGG | 0.290959 | 7.2:+22987773 | None:intergenic |
GAGCATTCTTACCTTTCCTT+TGG | 0.294554 | 7.2:-22987595 | MS.gene73353:CDS |
AGTTTCCTTACGTTGCCTTT+AGG | 0.294801 | 7.2:-22988678 | MS.gene73353:CDS |
ATGCAAACTATAGTTGTTTC+GGG | 0.304750 | 7.2:-22988392 | MS.gene73353:CDS |
TAATGTTTCTGCAGGAAATA+AGG | 0.319331 | 7.2:-22988829 | MS.gene73353:CDS |
GATGCAAACTATAGTTGTTT+CGG | 0.323369 | 7.2:-22988393 | MS.gene73353:CDS |
AGAGAGAAACAGAAATTTAC+AGG | 0.323584 | 7.2:+22990354 | None:intergenic |
GATCTGATCCATTGATTGAT+TGG | 0.337889 | 7.2:-22987194 | MS.gene73353:CDS |
CATTCTAAAGGAAGGCTTCC+AGG | 0.344456 | 7.2:-22987270 | MS.gene73353:CDS |
TAGATCAAGGGCATCATAAT+AGG | 0.353892 | 7.2:+22988497 | None:intergenic |
TTCCTTTGGGAGCAGTTATT+CGG | 0.358842 | 7.2:-22987581 | MS.gene73353:CDS |
AGCATTCTTACCTTTCCTTT+GGG | 0.359931 | 7.2:-22987594 | MS.gene73353:CDS |
TATCAAATTTAATGTGAAAC+TGG | 0.363555 | 7.2:-22987685 | MS.gene73353:CDS |
TTTAGGAGCAATTGCAAGAT+TGG | 0.366401 | 7.2:-22988661 | MS.gene73353:CDS |
ACACAAGCGTCAAAGATCTA+AGG | 0.388304 | 7.2:-22988584 | MS.gene73353:CDS |
CATGCTTTGCTTCCACTTCG+TGG | 0.400863 | 7.2:+22988352 | None:intergenic |
TCCAGAAATAAGAGTCTTGT+TGG | 0.408409 | 7.2:+22990272 | None:intergenic |
ATCTGATCCATTGATTGATT+GGG | 0.421945 | 7.2:-22987193 | MS.gene73353:CDS |
GACTGCTTTGGTCTCCAAAT+CGG | 0.424878 | 7.2:-22987787 | MS.gene73353:CDS |
CTTAGTTGCCAGGGCAGAAA+AGG | 0.435157 | 7.2:-22988721 | MS.gene73353:CDS |
AAGACTCTTATTTCTGGAGC+AGG | 0.437905 | 7.2:-22990267 | MS.gene73353:CDS |
GCAGTTATTCGGCTATTAGA+AGG | 0.440489 | 7.2:-22987570 | MS.gene73353:CDS |
AAACAACTATAGTTTGCATC+CGG | 0.441535 | 7.2:+22988396 | None:intergenic |
ACAAAGCTTGCTCTTGGAGT+TGG | 0.446380 | 7.2:+22987735 | None:intergenic |
AACTATAGTTGTTTCGGGTG+TGG | 0.457110 | 7.2:-22988387 | MS.gene73353:CDS |
CAAGAGACAAAGCTTGCTCT+TGG | 0.464371 | 7.2:+22987729 | None:intergenic |
ATACAAAAGTATACTTCTGT+TGG | 0.466527 | 7.2:-22987517 | MS.gene73353:CDS |
TGATAACTTTAGAGAAAGTC+TGG | 0.471085 | 7.2:-22987364 | MS.gene73353:CDS |
AATAATACACGTGTCACGCT+TGG | 0.472798 | 7.2:-22987132 | MS.gene73353:CDS |
ACAGATTCCGCACTTACATT+GGG | 0.473946 | 7.2:-22986974 | MS.gene73353:CDS |
TTTGGTATGACTATGTGATA+AGG | 0.480004 | 7.2:-22990332 | MS.gene73353:CDS |
AACAGATTCCGCACTTACAT+TGG | 0.480075 | 7.2:-22986975 | MS.gene73353:CDS |
AGACTTGTTAATCCACACTT+AGG | 0.481344 | 7.2:-22987459 | MS.gene73353:CDS |
TATTTAGTGGATCATTCTAA+AGG | 0.484739 | 7.2:-22987282 | MS.gene73353:CDS |
GTCGAGAGGGATTGTTCCAT+GGG | 0.485596 | 7.2:-22988639 | MS.gene73353:CDS |
GAGCATCATAATGTTTCTGC+AGG | 0.487171 | 7.2:-22988837 | MS.gene73353:CDS |
TTCAACTCAACAGTCTGATC+AGG | 0.487937 | 7.2:+22988774 | None:intergenic |
ATAATACACGTGTCACGCTT+GGG | 0.494812 | 7.2:-22987131 | MS.gene73353:CDS |
AAATACTCCCAATCAATCAA+TGG | 0.495446 | 7.2:+22987186 | None:intergenic |
CTAACCAGGTCTTAGTTGCC+AGG | 0.496051 | 7.2:-22988731 | MS.gene73353:CDS |
GAACAAAGAAAGTACTTATG+TGG | 0.496752 | 7.2:+22988456 | None:intergenic |
GGTCGAGAGGGATTGTTCCA+TGG | 0.500679 | 7.2:-22988640 | MS.gene73353:CDS |
TGATCAGGTGTTGCTACGGC+TGG | 0.503321 | 7.2:+22988789 | None:intergenic |
TTGGTATGACTATGTGATAA+GGG | 0.503342 | 7.2:-22990331 | MS.gene73353:CDS |
GTTGCCTCCTTTACATAACC+TGG | 0.507448 | 7.2:+22987252 | None:intergenic |
CTGCCCTGGCAACTAAGACC+TGG | 0.507723 | 7.2:+22988727 | None:intergenic |
GTTTGAGTCTCTTCCTGTGA+TGG | 0.511736 | 7.2:+22988519 | None:intergenic |
TGTCATGGATGTATAGATCA+AGG | 0.512391 | 7.2:+22988484 | None:intergenic |
GTTATCTGACCCTTTGCTAC+CGG | 0.513626 | 7.2:-22986939 | MS.gene73353:CDS |
CGGGTTCAAAAGACGAGGGC+AGG | 0.515820 | 7.2:+22988416 | None:intergenic |
AATCTTGCAATTGCTCCTAA+AGG | 0.523112 | 7.2:+22988663 | None:intergenic |
TCTTATTTCTGGAGCAGGGA+AGG | 0.528171 | 7.2:-22990262 | MS.gene73353:CDS |
TAGTGGATCATTCTAAAGGA+AGG | 0.531200 | 7.2:-22987278 | MS.gene73353:CDS |
GCAGCAAAGGATGGCAATGT+TGG | 0.532960 | 7.2:-22989368 | MS.gene73353:CDS |
TGAAAGCTCTGTGGGAAGCA+TGG | 0.539666 | 7.2:-22987547 | MS.gene73353:CDS |
GGAGATGATTATTCCATCAC+AGG | 0.543566 | 7.2:-22988532 | MS.gene73353:CDS |
CAACCTAGACCGGTAGCAAA+GGG | 0.547537 | 7.2:+22986930 | None:intergenic |
TGTGAAAGTCGATGCCGAAA+AGG | 0.549517 | 7.2:-22988187 | MS.gene73353:intron |
TCCATGGGGAAAATGCAACT+TGG | 0.550207 | 7.2:-22988624 | MS.gene73353:CDS |
TGTTATTTCTGAAGCAGCAA+AGG | 0.550360 | 7.2:-22989381 | MS.gene73353:CDS |
GACTTGTTAATCCACACTTA+GGG | 0.550495 | 7.2:-22987458 | MS.gene73353:CDS |
AGGTGTTGCTACGGCTGGCA+TGG | 0.554075 | 7.2:+22988794 | None:intergenic |
ACTTATGTGGCTCACTGTCA+TGG | 0.555602 | 7.2:+22988469 | None:intergenic |
TTAGAAGGTGAAAGCTCTGT+GGG | 0.555676 | 7.2:-22987555 | MS.gene73353:CDS |
ACAACCTAGACCGGTAGCAA+AGG | 0.559695 | 7.2:+22986929 | None:intergenic |
AGTCTGATCAGGTGTTGCTA+CGG | 0.574268 | 7.2:+22988785 | None:intergenic |
ATTTCTGAAGCAGCAAAGGA+TGG | 0.576874 | 7.2:-22989377 | MS.gene73353:CDS |
TTTCAATTTACAGGCAAGTG+AGG | 0.578576 | 7.2:-22987157 | MS.gene73353:CDS |
ACGTATTATTGTTATTACCA+CGG | 0.586459 | 7.2:-22987387 | MS.gene73353:CDS |
TATAGTTGTTTCGGGTGTGG+AGG | 0.589299 | 7.2:-22988384 | MS.gene73353:CDS |
GCAGGGAAGGACATCAATGT+TGG | 0.590722 | 7.2:-22990249 | MS.gene73353:CDS |
AGCCGAATAACTGCTCCCAA+AGG | 0.590958 | 7.2:+22987579 | None:intergenic |
TGCAGGAAATAAGGTAAACA+AGG | 0.594764 | 7.2:-22988820 | MS.gene73353:CDS |
AGGTAGCATGTGCCACGAAG+TGG | 0.594876 | 7.2:-22988364 | MS.gene73353:CDS |
AGACTCTTATTTCTGGAGCA+GGG | 0.596055 | 7.2:-22990266 | MS.gene73353:CDS |
TTGTGATGTTAAAAGCAAGA+AGG | 0.596297 | 7.2:-22987709 | MS.gene73353:CDS |
TTGCTCCTAAAGGCAACGTA+AGG | 0.596851 | 7.2:+22988673 | None:intergenic |
GTTGGTACAGATGATACTCT+AGG | 0.599141 | 7.2:-22990231 | MS.gene73353:intron |
AAGGCTTCCAGGTTATGTAA+AGG | 0.599342 | 7.2:-22987259 | MS.gene73353:CDS |
AACAACTATAGTTTGCATCC+GGG | 0.601084 | 7.2:+22988397 | None:intergenic |
CCATGGGGAAAATGCAACTT+GGG | 0.606388 | 7.2:-22988623 | MS.gene73353:CDS |
CATTAGAAAAGCAGATGACA+AGG | 0.607553 | 7.2:-22987661 | MS.gene73353:CDS |
GTCATGGATGTATAGATCAA+GGG | 0.612012 | 7.2:+22988485 | None:intergenic |
TAACCAGGTCTTAGTTGCCA+GGG | 0.614233 | 7.2:-22988730 | MS.gene73353:CDS |
TTAAATTGGCACCCTAAGTG+TGG | 0.614685 | 7.2:+22987447 | None:intergenic |
AATAACTGCTCCCAAAGGAA+AGG | 0.620651 | 7.2:+22987584 | None:intergenic |
AGAAGCGTGGAATAACAGAC+AGG | 0.622702 | 7.2:-22988230 | MS.gene73353:CDS |
CAATTGCAAGATTGGTCGAG+AGG | 0.628434 | 7.2:-22988653 | MS.gene73353:CDS |
CAGGTCTGCATTAGTGACAC+AGG | 0.630050 | 7.2:-22988211 | MS.gene73353:CDS |
AATTGCAAGATTGGTCGAGA+GGG | 0.630281 | 7.2:-22988652 | MS.gene73353:CDS |
CATGAATAGCTGGAGAAGCG+TGG | 0.633108 | 7.2:-22988243 | MS.gene73353:intron |
ATTAGAAGGTGAAAGCTCTG+TGG | 0.634335 | 7.2:-22987556 | MS.gene73353:CDS |
TCAACAGCTGAGGTAACAGA+TGG | 0.639197 | 7.2:-22989434 | MS.gene73353:intron |
GCTTCCAGGTTATGTAAAGG+AGG | 0.639282 | 7.2:-22987256 | MS.gene73353:CDS |
GCATCCGGGTTCAAAAGACG+AGG | 0.662818 | 7.2:+22988411 | None:intergenic |
GCTGAGGTAACAGATGGTGT+TGG | 0.663709 | 7.2:-22989428 | MS.gene73353:CDS |
CATCCGGGTTCAAAAGACGA+GGG | 0.671731 | 7.2:+22988412 | None:intergenic |
TTGCAAACCCAATGTAAGTG+CGG | 0.717536 | 7.2:+22986967 | None:intergenic |
TCGAGAGGGATTGTTCCATG+GGG | 0.755829 | 7.2:-22988638 | MS.gene73353:CDS |
TTTCTCTAAAGTTATCACCG+TGG | 0.767754 | 7.2:+22987370 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | ATATCATTTAATTATAACAT+GGG | - | chr7.2:22989171-22989190 | MS.gene73353:intron | 10.0% |
!! | ATGTTATAATTAAATGATAT+GGG | + | chr7.2:22989171-22989190 | None:intergenic | 10.0% |
!!! | CATTTTATTTTTTTAAGAAA+TGG | - | chr7.2:22988128-22988147 | MS.gene73353:intron | 10.0% |
!!! | TCATTATTGATTATTTTTTA+TGG | - | chr7.2:22990250-22990269 | MS.gene73353:CDS | 10.0% |
!! | AAAATAGTATAAAAAATGGA+CGG | + | chr7.2:22987438-22987457 | None:intergenic | 15.0% |
!! | CATATCATTTAATTATAACA+TGG | - | chr7.2:22989170-22989189 | MS.gene73353:intron | 15.0% |
!! | CATGTTATAATTAAATGATA+TGG | + | chr7.2:22989172-22989191 | None:intergenic | 15.0% |
!! | TAGGAAAATAGTATAAAAAA+TGG | + | chr7.2:22987442-22987461 | None:intergenic | 15.0% |
!! | TCTTAAAAAAATAAAATGAG+AGG | + | chr7.2:22988126-22988145 | None:intergenic | 15.0% |
!!! | GGTCATAAATTTTTAAAATA+AGG | - | chr7.2:22989376-22989395 | MS.gene73353:CDS | 15.0% |
!! | AAATAGTATAAAAAATGGAC+GGG | + | chr7.2:22987437-22987456 | None:intergenic | 20.0% |
!! | AAGGAAATTCATCAAATATT+AGG | + | chr7.2:22987461-22987480 | None:intergenic | 20.0% |
!! | AAGTTAAATCGATAAAGAAA+AGG | + | chr7.2:22987151-22987170 | None:intergenic | 20.0% |
!! | ATTTAGTGTATATAGTCTAT+TGG | - | chr7.2:22987603-22987622 | MS.gene73353:CDS | 20.0% |
!! | TAATCTTTATGTATTAATGC+AGG | - | chr7.2:22988341-22988360 | MS.gene73353:intron | 20.0% |
!! | TATCAAATTTAATGTGAAAC+TGG | - | chr7.2:22989606-22989625 | MS.gene73353:intron | 20.0% |
!! | TTACAACAATTAAAATTGAG+AGG | + | chr7.2:22987245-22987264 | None:intergenic | 20.0% |
!! | TTGTGAAAAACTATATTTAG+TGG | - | chr7.2:22989996-22990015 | MS.gene73353:intron | 20.0% |
!! | TTTCAAAACTTTCAATTTAC+AGG | - | chr7.2:22990125-22990144 | MS.gene73353:intron | 20.0% |
!!! | ATTATTTTTTATGGTTTTGC+TGG | - | chr7.2:22990259-22990278 | MS.gene73353:CDS | 20.0% |
!!! | CTTTATCGATTTAACTTATT+TGG | - | chr7.2:22987154-22987173 | MS.gene73353:CDS | 20.0% |
!!! | GTTTTTGAATAGTAAGATTA+AGG | - | chr7.2:22989221-22989240 | MS.gene73353:intron | 20.0% |
!!! | TAAGTTGAAATTAACTATGT+TGG | - | chr7.2:22989405-22989424 | MS.gene73353:CDS | 20.0% |
!!! | TATTTGAAATTGGCAAAATT+TGG | + | chr7.2:22989879-22989898 | None:intergenic | 20.0% |
!!! | TTCTTTTCAAAAGTAATTGA+TGG | + | chr7.2:22987702-22987721 | None:intergenic | 20.0% |
! | AACACTTGAATACAATGAAA+TGG | + | chr7.2:22987355-22987374 | None:intergenic | 25.0% |
! | ACATCAACAATAAGAAAGAA+TGG | + | chr7.2:22989203-22989222 | None:intergenic | 25.0% |
! | GCTTAAGAACAAAATTTCTA+TGG | - | chr7.2:22988191-22988210 | MS.gene73353:CDS | 25.0% |
! | GGTCAAAATAAATTCATACA+AGG | + | chr7.2:22989314-22989333 | None:intergenic | 25.0% |
! | TATTTGGATTCCAACAAATA+GGG | - | chr7.2:22987170-22987189 | MS.gene73353:CDS | 25.0% |
! | TCTAGTAACAACAAAAACAA+AGG | - | chr7.2:22988738-22988757 | MS.gene73353:CDS | 25.0% |
! | TTAATTATTCTAGCAAAGAG+AGG | + | chr7.2:22990228-22990247 | None:intergenic | 25.0% |
! | TTATTTGGATTCCAACAAAT+AGG | - | chr7.2:22987169-22987188 | MS.gene73353:CDS | 25.0% |
! | TTCATAACTCCACTAATATT+TGG | + | chr7.2:22989278-22989297 | None:intergenic | 25.0% |
!! | ACGTATTATTGTTATTACCA+CGG | - | chr7.2:22989904-22989923 | MS.gene73353:intron | 25.0% |
!! | ATACAAAAGTATACTTCTGT+TGG | - | chr7.2:22989774-22989793 | MS.gene73353:intron | 25.0% |
!! | GTAGAACATAAATACCTTTT+CGG | + | chr7.2:22989121-22989140 | None:intergenic | 25.0% |
!! | TAAATGATATGGGATTTTGT+GGG | + | chr7.2:22989161-22989180 | None:intergenic | 25.0% |
!! | TAAATTTCTGTTTCTCTCTT+TGG | - | chr7.2:22986941-22986960 | MS.gene73353:CDS | 25.0% |
!! | TACGTTGTCATATTTGAAAT+TGG | + | chr7.2:22989889-22989908 | None:intergenic | 25.0% |
!! | TATTTAGTGGATCATTCTAA+AGG | - | chr7.2:22990009-22990028 | MS.gene73353:intron | 25.0% |
!! | TTAAATGATATGGGATTTTG+TGG | + | chr7.2:22989162-22989181 | None:intergenic | 25.0% |
!! | TTGTTGGTTATGTATCAATA+AGG | + | chr7.2:22987480-22987499 | None:intergenic | 25.0% |
!!! | AAATGCATGTTTTTTTTGTG+TGG | - | chr7.2:22987577-22987596 | MS.gene73353:CDS | 25.0% |
!!! | AATAGGGTTGATGTAATTAA+TGG | - | chr7.2:22987186-22987205 | MS.gene73353:CDS | 25.0% |
!!! | CTTTGTCGATTTAACTTATT+TGG | - | chr7.2:22988045-22988064 | MS.gene73353:intron | 25.0% |
!!! | TAAAATTGAGAGGTATTAAG+TGG | + | chr7.2:22987235-22987254 | None:intergenic | 25.0% |
!!! | TTTTTTAGTTACAGATGAGT+TGG | - | chr7.2:22990065-22990084 | MS.gene73353:intron | 25.0% |
AAATACTCCCAATCAATCAA+TGG | + | chr7.2:22990108-22990127 | None:intergenic | 30.0% | |
AATCATGGTTGTTAGAAATG+TGG | - | chr7.2:22989355-22989374 | MS.gene73353:CDS | 30.0% | |
AATGGTAAACGTCAAACATA+AGG | + | chr7.2:22987337-22987356 | None:intergenic | 30.0% | |
AATGGTTAACGTCAAACTTA+AGG | + | chr7.2:22988227-22988246 | None:intergenic | 30.0% | |
AGAGAGAAACAGAAATTTAC+AGG | + | chr7.2:22986940-22986959 | None:intergenic | 30.0% | |
ATAGTCTATTGGAAAGAAAG+AGG | - | chr7.2:22987614-22987633 | MS.gene73353:CDS | 30.0% | |
ATGTTTCATTCACGAATTGT+TGG | + | chr7.2:22987496-22987515 | None:intergenic | 30.0% | |
ATTACATCAACCCTATTTGT+TGG | + | chr7.2:22987183-22987202 | None:intergenic | 30.0% | |
ATTTATGTATCTCCCTTGAT+AGG | - | chr7.2:22988406-22988425 | MS.gene73353:CDS | 30.0% | |
CCTACAAACTCATATTCATA+GGG | + | chr7.2:22987674-22987693 | None:intergenic | 30.0% | |
CTCATCTGTAACTAAAAAAG+TGG | + | chr7.2:22990064-22990083 | None:intergenic | 30.0% | |
GAATCGATGATGAGAAAAAA+TGG | + | chr7.2:22989457-22989476 | None:intergenic | 30.0% | |
GAGTTATGAATAACCTAAAG+CGG | - | chr7.2:22989288-22989307 | MS.gene73353:intron | 30.0% | |
GATGCAAACTATAGTTGTTT+CGG | - | chr7.2:22988898-22988917 | MS.gene73353:intron | 30.0% | |
TAGCAAAGAGAGGAATTTAT+TGG | + | chr7.2:22990218-22990237 | None:intergenic | 30.0% | |
TATGCAGACATTCATACATA+AGG | + | chr7.2:22987744-22987763 | None:intergenic | 30.0% | |
TCCTGAATCAATTGATTGAA+AGG | + | chr7.2:22989335-22989354 | None:intergenic | 30.0% | |
TGGAAAAACAGTCAAATCAT+CGG | + | chr7.2:22989007-22989026 | None:intergenic | 30.0% | |
TTGGTATGACTATGTGATAA+GGG | - | chr7.2:22986960-22986979 | MS.gene73353:CDS | 30.0% | |
TTGTGATGTTAAAAGCAAGA+AGG | - | chr7.2:22989582-22989601 | MS.gene73353:intron | 30.0% | |
TTTGGTATGACTATGTGATA+AGG | - | chr7.2:22986959-22986978 | MS.gene73353:CDS | 30.0% | |
! | AAACAACTATAGTTTGCATC+CGG | + | chr7.2:22988898-22988917 | None:intergenic | 30.0% |
! | ACCTTTCAATCAATTGATTC+AGG | - | chr7.2:22989331-22989350 | MS.gene73353:intron | 30.0% |
! | AGGAATTTATTGGTGATAGA+GGG | + | chr7.2:22990208-22990227 | None:intergenic | 30.0% |
! | ATAACAGATGCTTTTAACGA+TGG | - | chr7.2:22989967-22989986 | MS.gene73353:intron | 30.0% |
! | ATCTGATCCATTGATTGATT+GGG | - | chr7.2:22990098-22990117 | MS.gene73353:intron | 30.0% |
! | ATGCAAACTATAGTTGTTTC+GGG | - | chr7.2:22988899-22988918 | MS.gene73353:intron | 30.0% |
! | ATTAAGTAGTGCTGAAACTA+CGG | + | chr7.2:22988101-22988120 | None:intergenic | 30.0% |
! | GTAAACTCACATGAAGTTTT+AGG | + | chr7.2:22987953-22987972 | None:intergenic | 30.0% |
! | TAATGTTTCTGCAGGAAATA+AGG | - | chr7.2:22988462-22988481 | MS.gene73353:CDS | 30.0% |
! | TAATTACTTGATGACCTCTT+TGG | - | chr7.2:22988285-22988304 | MS.gene73353:intron | 30.0% |
! | TCAATTGATTCAGGAAATCA+TGG | - | chr7.2:22989340-22989359 | MS.gene73353:intron | 30.0% |
! | TGATAACTTTAGAGAAAGTC+TGG | - | chr7.2:22989927-22989946 | MS.gene73353:intron | 30.0% |
! | TTCAAAAGTAATTGATGGCT+TGG | + | chr7.2:22987697-22987716 | None:intergenic | 30.0% |
! | TTTGGTTTCGTAGCTTAAAT+TGG | + | chr7.2:22989861-22989880 | None:intergenic | 30.0% |
! | TTTTGTGGGAAATTAAGAGT+AGG | + | chr7.2:22989147-22989166 | None:intergenic | 30.0% |
!! | AAGAAAAGTACCTGAAACTA+CGG | + | chr7.2:22988028-22988047 | None:intergenic | 30.0% |
!! | CTCTAATGTTTCATTTTTCG+AGG | + | chr7.2:22988437-22988456 | None:intergenic | 30.0% |
!! | GAACAAAGAAAGTACTTATG+TGG | + | chr7.2:22988838-22988857 | None:intergenic | 30.0% |
!! | TGGCTACTATTTCTATTTGT+TGG | + | chr7.2:22988074-22988093 | None:intergenic | 30.0% |
AAAAACGCAATCAGCTATGA+CGG | + | chr7.2:22988977-22988996 | None:intergenic | 35.0% | |
AAGAAAAGGACCTGAAACTA+CGG | + | chr7.2:22987137-22987156 | None:intergenic | 35.0% | |
AATCTTGCAATTGCTCCTAA+AGG | + | chr7.2:22988631-22988650 | None:intergenic | 35.0% | |
AGCATTCTTACCTTTCCTTT+GGG | - | chr7.2:22989697-22989716 | MS.gene73353:intron | 35.0% | |
AGTATAAAAAATGGACGGGA+TGG | + | chr7.2:22987433-22987452 | None:intergenic | 35.0% | |
CATTAGAAAAGCAGATGACA+AGG | - | chr7.2:22989630-22989649 | MS.gene73353:intron | 35.0% | |
CCCTATGAATATGAGTTTGT+AGG | - | chr7.2:22987671-22987690 | MS.gene73353:CDS | 35.0% | |
CGAATTTCTGTTTCACTCTT+TGG | - | chr7.2:22987805-22987824 | MS.gene73353:CDS | 35.0% | |
CTCTTTGGTATGTGATACAA+TGG | - | chr7.2:22987820-22987839 | MS.gene73353:intron | 35.0% | |
GAAAAAAAACCTCTTGATGC+TGG | - | chr7.2:22987636-22987655 | MS.gene73353:CDS | 35.0% | |
GCCTACAAACTCATATTCAT+AGG | + | chr7.2:22987675-22987694 | None:intergenic | 35.0% | |
GTCATGGATGTATAGATCAA+GGG | + | chr7.2:22988809-22988828 | None:intergenic | 35.0% | |
GTCTACTTCTACAAGATAGA+AGG | - | chr7.2:22987537-22987556 | MS.gene73353:CDS | 35.0% | |
TAACGTCAAACATACCAAAG+AGG | + | chr7.2:22988302-22988321 | None:intergenic | 35.0% | |
TATCCACAAAAAGACTAACC+AGG | - | chr7.2:22988546-22988565 | MS.gene73353:CDS | 35.0% | |
TGCAGGAAATAAGGTAAACA+AGG | - | chr7.2:22988471-22988490 | MS.gene73353:CDS | 35.0% | |
TGTCATGGATGTATAGATCA+AGG | + | chr7.2:22988810-22988829 | None:intergenic | 35.0% | |
TTTAGGAGCAATTGCAAGAT+TGG | - | chr7.2:22988630-22988649 | MS.gene73353:CDS | 35.0% | |
TTTCAATTTACAGGCAAGTG+AGG | - | chr7.2:22990134-22990153 | MS.gene73353:intron | 35.0% | |
! | AACAACTATAGTTTGCATCC+GGG | + | chr7.2:22988897-22988916 | None:intergenic | 35.0% |
! | ACCAACAAGACTCTTATTTC+TGG | - | chr7.2:22987018-22987037 | MS.gene73353:intron | 35.0% |
! | GAGGAATTTATTGGTGATAG+AGG | + | chr7.2:22990209-22990228 | None:intergenic | 35.0% |
! | GATCTGATCCATTGATTGAT+TGG | - | chr7.2:22990097-22990116 | MS.gene73353:intron | 35.0% |
! | TAGTGGATCATTCTAAAGGA+AGG | - | chr7.2:22990013-22990032 | MS.gene73353:intron | 35.0% |
! | TCCAGAAATAAGAGTCTTGT+TGG | + | chr7.2:22987022-22987041 | None:intergenic | 35.0% |
!! | AGACTTGTTAATCCACACTT+AGG | - | chr7.2:22989832-22989851 | MS.gene73353:intron | 35.0% |
!! | GACTTGTTAATCCACACTTA+GGG | - | chr7.2:22989833-22989852 | MS.gene73353:intron | 35.0% |
!! | GGATCTTTTAAAGACTGCTT+TGG | - | chr7.2:22989492-22989511 | MS.gene73353:intron | 35.0% |
!! | GGTTTTGTGCCAAATATTAG+TGG | - | chr7.2:22989266-22989285 | MS.gene73353:intron | 35.0% |
!! | TAGATCAAGGGCATCATAAT+AGG | + | chr7.2:22988797-22988816 | None:intergenic | 35.0% |
!! | TGTTATTTCTGAAGCAGCAA+AGG | - | chr7.2:22987910-22987929 | MS.gene73353:intron | 35.0% |
!! | TTTCTCTAAAGTTATCACCG+TGG | + | chr7.2:22989924-22989943 | None:intergenic | 35.0% |
AAACCAGAGAAGTGACAAGT+TGG | + | chr7.2:22989251-22989270 | None:intergenic | 40.0% | |
AACAGATTCCGCACTTACAT+TGG | - | chr7.2:22990316-22990335 | MS.gene73353:CDS | 40.0% | |
AACCAGAGAAGTGACAAGTT+GGG | + | chr7.2:22989250-22989269 | None:intergenic | 40.0% | |
AAGGCTTCCAGGTTATGTAA+AGG | - | chr7.2:22990032-22990051 | MS.gene73353:intron | 40.0% | |
AATAACTGCTCCCAAAGGAA+AGG | + | chr7.2:22989710-22989729 | None:intergenic | 40.0% | |
AATAATACACGTGTCACGCT+TGG | - | chr7.2:22990159-22990178 | MS.gene73353:intron | 40.0% | |
ACACAAGCGTCAAAGATCTA+AGG | - | chr7.2:22988707-22988726 | MS.gene73353:CDS | 40.0% | |
ACAGATTCCGCACTTACATT+GGG | - | chr7.2:22990317-22990336 | MS.gene73353:CDS | 40.0% | |
AGTTTCCTTACGTTGCCTTT+AGG | - | chr7.2:22988613-22988632 | MS.gene73353:CDS | 40.0% | |
ATAATACACGTGTCACGCTT+GGG | - | chr7.2:22990160-22990179 | MS.gene73353:intron | 40.0% | |
ATTAGAAGGTGAAAGCTCTG+TGG | - | chr7.2:22989735-22989754 | MS.gene73353:intron | 40.0% | |
CAAATCACTAAGAGCCGATT+TGG | + | chr7.2:22989521-22989540 | None:intergenic | 40.0% | |
CGATTCATTTCTGCAGGTAT+TGG | - | chr7.2:22989471-22989490 | MS.gene73353:intron | 40.0% | |
GAGCATTCTTACCTTTCCTT+TGG | - | chr7.2:22989696-22989715 | MS.gene73353:intron | 40.0% | |
GCAGTTATTCGGCTATTAGA+AGG | - | chr7.2:22989721-22989740 | MS.gene73353:intron | 40.0% | |
GGAGATGATTATTCCATCAC+AGG | - | chr7.2:22988759-22988778 | MS.gene73353:CDS | 40.0% | |
GTTGGTACAGATGATACTCT+AGG | - | chr7.2:22987060-22987079 | MS.gene73353:intron | 40.0% | |
TTAAATTGGCACCCTAAGTG+TGG | + | chr7.2:22989847-22989866 | None:intergenic | 40.0% | |
TTAGAAGGTGAAAGCTCTGT+GGG | - | chr7.2:22989736-22989755 | MS.gene73353:intron | 40.0% | |
TTCAACTCAACAGTCTGATC+AGG | + | chr7.2:22988520-22988539 | None:intergenic | 40.0% | |
TTGCAAACCCAATGTAAGTG+CGG | + | chr7.2:22990327-22990346 | None:intergenic | 40.0% | |
! | AACTATAGTTGTTTCGGGTG+TGG | - | chr7.2:22988904-22988923 | MS.gene73353:intron | 40.0% |
! | AATTCATACAAGGCCGCTTT+AGG | + | chr7.2:22989304-22989323 | None:intergenic | 40.0% |
! | AATTGCAAGATTGGTCGAGA+GGG | - | chr7.2:22988639-22988658 | MS.gene73353:CDS | 40.0% |
! | AGTGCTGAAACTACGGATAA+TGG | + | chr7.2:22988094-22988113 | None:intergenic | 40.0% |
! | GAGCATCATAATGTTTCTGC+AGG | - | chr7.2:22988454-22988473 | MS.gene73353:CDS | 40.0% |
! | TTCCTTTGGGAGCAGTTATT+CGG | - | chr7.2:22989710-22989729 | MS.gene73353:intron | 40.0% |
!! | AAGACTCTTATTTCTGGAGC+AGG | - | chr7.2:22987024-22987043 | MS.gene73353:intron | 40.0% |
!! | AGACTCTTATTTCTGGAGCA+GGG | - | chr7.2:22987025-22987044 | MS.gene73353:intron | 40.0% |
!! | ATTTCTGAAGCAGCAAAGGA+TGG | - | chr7.2:22987914-22987933 | MS.gene73353:intron | 40.0% |
!! | CATCATCGATTCATTTCTGC+AGG | - | chr7.2:22989465-22989484 | MS.gene73353:intron | 40.0% |
!! | TGTTGTTTCTTCAACAGCTG+AGG | - | chr7.2:22987847-22987866 | MS.gene73353:intron | 40.0% |
!! | TTTTGTTGTCTCAGCTGTTG+AGG | + | chr7.2:22986998-22987017 | None:intergenic | 40.0% |
!!! | AGACCTGGTTAGTCTTTTTG+TGG | + | chr7.2:22988552-22988571 | None:intergenic | 40.0% |
ACGCTTCTCCAGCTATTCAT+GGG | + | chr7.2:22989049-22989068 | None:intergenic | 45.0% | |
ACTTATGTGGCTCACTGTCA+TGG | + | chr7.2:22988825-22988844 | None:intergenic | 45.0% | |
CCATGGGGAAAATGCAACTT+GGG | - | chr7.2:22988668-22988687 | MS.gene73353:CDS | 45.0% | |
CTTCTCAACCCATGAATAGC+TGG | - | chr7.2:22989038-22989057 | MS.gene73353:intron | 45.0% | |
GAAGTGGAAGCAAAGCATGT+GGG | - | chr7.2:22988943-22988962 | MS.gene73353:intron | 45.0% | |
GACTGCTTTGGTCTCCAAAT+CGG | - | chr7.2:22989504-22989523 | MS.gene73353:intron | 45.0% | |
GCTTCCAGGTTATGTAAAGG+AGG | - | chr7.2:22990035-22990054 | MS.gene73353:intron | 45.0% | |
GTACCTGAAACTACGGATAG+TGG | + | chr7.2:22988021-22988040 | None:intergenic | 45.0% | |
GTTATCTGACCCTTTGCTAC+CGG | - | chr7.2:22990352-22990371 | MS.gene73353:CDS | 45.0% | |
GTTGCCTCCTTTACATAACC+TGG | + | chr7.2:22990042-22990061 | None:intergenic | 45.0% | |
GTTTGAGTCTCTTCCTGTGA+TGG | + | chr7.2:22988775-22988794 | None:intergenic | 45.0% | |
TAACCAGGTCTTAGTTGCCA+GGG | - | chr7.2:22988561-22988580 | MS.gene73353:CDS | 45.0% | |
TAGCCACTATCCGTAGTTTC+AGG | - | chr7.2:22987124-22987143 | MS.gene73353:CDS | 45.0% | |
TCAACAGCTGAGGTAACAGA+TGG | - | chr7.2:22987857-22987876 | MS.gene73353:intron | 45.0% | |
TCCATGGGGAAAATGCAACT+TGG | - | chr7.2:22988667-22988686 | MS.gene73353:CDS | 45.0% | |
TGTGAAAGTCGATGCCGAAA+AGG | - | chr7.2:22989104-22989123 | MS.gene73353:intron | 45.0% | |
TTCGAGGTAGCACCTATCAA+GGG | + | chr7.2:22988421-22988440 | None:intergenic | 45.0% | |
TTGCTCCTAAAGGCAACGTA+AGG | + | chr7.2:22988621-22988640 | None:intergenic | 45.0% | |
TTTCGAGGTAGCACCTATCA+AGG | + | chr7.2:22988422-22988441 | None:intergenic | 45.0% | |
! | AACAAAGTCCTTTTCTGCCC+TGG | + | chr7.2:22988581-22988600 | None:intergenic | 45.0% |
! | ACAAAGCTTGCTCTTGGAGT+TGG | + | chr7.2:22989559-22989578 | None:intergenic | 45.0% |
! | AGAAGCGTGGAATAACAGAC+AGG | - | chr7.2:22989061-22989080 | MS.gene73353:intron | 45.0% |
! | CAAGAGACAAAGCTTGCTCT+TGG | + | chr7.2:22989565-22989584 | None:intergenic | 45.0% |
! | CAATTGCAAGATTGGTCGAG+AGG | - | chr7.2:22988638-22988657 | MS.gene73353:CDS | 45.0% |
! | CATTCTAAAGGAAGGCTTCC+AGG | - | chr7.2:22990021-22990040 | MS.gene73353:intron | 45.0% |
! | GATTAGCATCGAGCATCAAG+AGG | + | chr7.2:22988326-22988345 | None:intergenic | 45.0% |
! | TATAGTTGTTTCGGGTGTGG+AGG | - | chr7.2:22988907-22988926 | MS.gene73353:intron | 45.0% |
! | TTCATGGGTTGAGAAGTCTG+TGG | + | chr7.2:22989034-22989053 | None:intergenic | 45.0% |
!! | AGTCTGATCAGGTGTTGCTA+CGG | + | chr7.2:22988509-22988528 | None:intergenic | 45.0% |
!! | TCTTATTTCTGGAGCAGGGA+AGG | - | chr7.2:22987029-22987048 | MS.gene73353:intron | 45.0% |
!!! | ATTTTATTTTTTTAAGAAAT+GGG | - | chr7.2:22988129-22988148 | MS.gene73353:intron | 5.0% |
AACCTCTTGATGCTGGATGC+AGG | - | chr7.2:22987643-22987662 | MS.gene73353:CDS | 50.0% | |
ACCTCTTGATGCTGGATGCA+GGG | - | chr7.2:22987644-22987663 | MS.gene73353:CDS | 50.0% | |
AGCCGAATAACTGCTCCCAA+AGG | + | chr7.2:22989715-22989734 | None:intergenic | 50.0% | |
CACGCTTCTCCAGCTATTCA+TGG | + | chr7.2:22989050-22989069 | None:intergenic | 50.0% | |
CAGGTCTGCATTAGTGACAC+AGG | - | chr7.2:22989080-22989099 | MS.gene73353:intron | 50.0% | |
CATCCGGGTTCAAAAGACGA+GGG | + | chr7.2:22988882-22988901 | None:intergenic | 50.0% | |
CATGAATAGCTGGAGAAGCG+TGG | - | chr7.2:22989048-22989067 | MS.gene73353:intron | 50.0% | |
CATGCTTTGCTTCCACTTCG+TGG | + | chr7.2:22988942-22988961 | None:intergenic | 50.0% | |
CGAAGTGGAAGCAAAGCATG+TGG | - | chr7.2:22988942-22988961 | MS.gene73353:intron | 50.0% | |
CTAACCAGGTCTTAGTTGCC+AGG | - | chr7.2:22988560-22988579 | MS.gene73353:CDS | 50.0% | |
CTTAGTTGCCAGGGCAGAAA+AGG | - | chr7.2:22988570-22988589 | MS.gene73353:CDS | 50.0% | |
GCAGCAAAGGATGGCAATGT+TGG | - | chr7.2:22987923-22987942 | MS.gene73353:intron | 50.0% | |
GCAGGGAAGGACATCAATGT+TGG | - | chr7.2:22987042-22987061 | MS.gene73353:intron | 50.0% | |
GCTGAGGTAACAGATGGTGT+TGG | - | chr7.2:22987863-22987882 | MS.gene73353:intron | 50.0% | |
GGACCTGAAACTACGGATAG+TGG | + | chr7.2:22987130-22987149 | None:intergenic | 50.0% | |
GTCGAGAGGGATTGTTCCAT+GGG | - | chr7.2:22988652-22988671 | MS.gene73353:CDS | 50.0% | |
GTTGAGAAGTCTGTGGTGTG+TGG | + | chr7.2:22989027-22989046 | None:intergenic | 50.0% | |
TCGAGAGGGATTGTTCCATG+GGG | - | chr7.2:22988653-22988672 | MS.gene73353:CDS | 50.0% | |
TGAAAGCTCTGTGGGAAGCA+TGG | - | chr7.2:22989744-22989763 | MS.gene73353:intron | 50.0% | |
! | CCCAAGTTGCATTTTCCCCA+TGG | + | chr7.2:22988671-22988690 | None:intergenic | 50.0% |
! | TGCCCAACTTGTCACTTCTC+TGG | - | chr7.2:22989245-22989264 | MS.gene73353:intron | 50.0% |
AAATGGACGGGATGGCAGCA+TGG | + | chr7.2:22987425-22987444 | None:intergenic | 55.0% | |
AGGTAGCATGTGCCACGAAG+TGG | - | chr7.2:22988927-22988946 | MS.gene73353:intron | 55.0% | |
GCATCCGGGTTCAAAAGACG+AGG | + | chr7.2:22988883-22988902 | None:intergenic | 55.0% | |
GGTCGAGAGGGATTGTTCCA+TGG | - | chr7.2:22988651-22988670 | MS.gene73353:CDS | 55.0% | |
TCCCTGCATCCAGCATCAAG+AGG | + | chr7.2:22987648-22987667 | None:intergenic | 55.0% | |
! | CTGCCCTCGTCTTTTGAACC+CGG | - | chr7.2:22988876-22988895 | MS.gene73353:intron | 55.0% |
!! | TGATCAGGTGTTGCTACGGC+TGG | + | chr7.2:22988505-22988524 | None:intergenic | 55.0% |
CGGGTTCAAAAGACGAGGGC+AGG | + | chr7.2:22988878-22988897 | None:intergenic | 60.0% | |
CTGCCCTGGCAACTAAGACC+TGG | + | chr7.2:22988567-22988586 | None:intergenic | 60.0% | |
!! | AGGTGTTGCTACGGCTGGCA+TGG | + | chr7.2:22988500-22988519 | None:intergenic | 60.0% |
TGGACGGGATGGCAGCATGG+AGG | + | chr7.2:22987422-22987441 | None:intergenic | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr7.2 | gene | 22986934 | 22990379 | 22986934 | ID=MS.gene73353 |
chr7.2 | mRNA | 22986934 | 22990379 | 22986934 | ID=MS.gene73353.t1;Parent=MS.gene73353 |
chr7.2 | exon | 22990232 | 22990379 | 22990232 | ID=MS.gene73353.t1.exon1;Parent=MS.gene73353.t1 |
chr7.2 | CDS | 22990232 | 22990379 | 22990232 | ID=cds.MS.gene73353.t1;Parent=MS.gene73353.t1 |
chr7.2 | exon | 22989351 | 22989449 | 22989351 | ID=MS.gene73353.t1.exon2;Parent=MS.gene73353.t1 |
chr7.2 | CDS | 22989351 | 22989449 | 22989351 | ID=cds.MS.gene73353.t1;Parent=MS.gene73353.t1 |
chr7.2 | exon | 22988353 | 22988885 | 22988353 | ID=MS.gene73353.t1.exon3;Parent=MS.gene73353.t1 |
chr7.2 | CDS | 22988353 | 22988885 | 22988353 | ID=cds.MS.gene73353.t1;Parent=MS.gene73353.t1 |
chr7.2 | exon | 22988188 | 22988256 | 22988188 | ID=MS.gene73353.t1.exon4;Parent=MS.gene73353.t1 |
chr7.2 | CDS | 22988188 | 22988256 | 22988188 | ID=cds.MS.gene73353.t1;Parent=MS.gene73353.t1 |
chr7.2 | exon | 22987122 | 22987826 | 22987122 | ID=MS.gene73353.t1.exon5;Parent=MS.gene73353.t1 |
chr7.2 | CDS | 22987122 | 22987826 | 22987122 | ID=cds.MS.gene73353.t1;Parent=MS.gene73353.t1 |
chr7.2 | exon | 22986934 | 22987026 | 22986934 | ID=MS.gene73353.t1.exon6;Parent=MS.gene73353.t1 |
chr7.2 | CDS | 22986934 | 22987026 | 22986934 | ID=cds.MS.gene73353.t1;Parent=MS.gene73353.t1 |
Gene Sequence |
Protein sequence |