AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene055069

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene055069.t1 MTR_7g066490 84.018 438 29 3 1 419 1 416 0.0 718
MS.gene055069.t1 MTR_7g066480 81.093 439 54 3 1 419 1 430 0.0 696
MS.gene055069.t1 MTR_7g066350 41.372 452 193 13 15 407 8 446 3.93e-86 270
MS.gene055069.t1 MTR_7g066260 41.304 460 199 13 15 412 14 464 2.42e-85 269
MS.gene055069.t1 MTR_7g066340 40.043 462 196 15 15 412 11 455 6.13e-84 265
MS.gene055069.t1 MTR_7g066570 39.256 484 194 13 15 412 13 482 1.69e-83 266
MS.gene055069.t1 MTR_7g066360 38.581 451 210 11 17 413 15 452 7.40e-83 262
MS.gene055069.t1 MTR_7g066290 41.647 425 216 12 15 411 14 434 8.27e-83 261
MS.gene055069.t1 MTR_7g012680 39.207 454 201 11 15 412 13 447 3.56e-80 254
MS.gene055069.t1 MTR_7g066310 39.030 433 176 11 15 412 6 385 2.03e-79 251
MS.gene055069.t1 MTR_1g041315 37.698 443 209 12 15 394 13 451 6.40e-75 242
MS.gene055069.t1 MTR_7g066410 42.938 354 142 9 17 321 11 353 1.12e-74 242
MS.gene055069.t1 MTR_7g066410 63.855 83 30 0 329 411 431 513 6.34e-24 104
MS.gene055069.t1 MTR_7g066430 43.266 349 152 9 14 331 2 335 1.52e-72 236
MS.gene055069.t1 MTR_7g066430 66.667 75 25 0 336 410 411 485 2.52e-22 99.4
MS.gene055069.t1 MTR_7g058700 38.272 405 206 9 28 406 531 917 6.53e-70 237
MS.gene055069.t1 MTR_7g063830 38.549 441 218 13 17 414 11 441 8.74e-69 224
MS.gene055069.t1 MTR_3g007740 36.585 451 215 11 16 411 9 443 1.25e-67 221
MS.gene055069.t1 MTR_7g062280 40.116 344 148 8 17 321 11 335 5.65e-66 218
MS.gene055069.t1 MTR_7g062280 42.056 107 57 2 305 411 385 486 2.37e-14 75.1
MS.gene055069.t1 MTR_7g066400 35.165 455 198 13 16 406 12 433 1.52e-64 214
MS.gene055069.t1 MTR_7g063840 33.909 463 233 8 17 411 11 468 4.69e-64 213
MS.gene055069.t1 MTR_1g014060 36.486 444 160 12 25 412 9 386 9.33e-64 210
MS.gene055069.t1 MTR_7g063660 34.188 468 232 11 16 411 9 472 1.09e-63 212
MS.gene055069.t1 MTR_7g063900 40.491 326 164 6 16 323 10 323 2.10e-63 212
MS.gene055069.t1 MTR_7g062300 39.940 333 152 9 17 321 13 325 6.53e-62 207
MS.gene055069.t1 MTR_7g062300 46.575 73 38 1 336 407 398 470 9.63e-14 73.2
MS.gene055069.t1 MTR_7g063880 35.158 475 219 13 16 417 11 469 8.26e-61 204
MS.gene055069.t1 MTR_7g058710 33.198 494 205 13 15 410 11 477 4.88e-60 202
MS.gene055069.t1 MTR_7g063670 33.833 467 229 12 11 416 9 456 2.96e-58 197
MS.gene055069.t1 MTR_7g063890 39.557 316 180 5 16 323 27 339 2.23e-54 188
MS.gene055069.t1 MTR_7g066580 39.062 320 158 9 22 331 1 293 5.17e-53 183
MS.gene055069.t1 MTR_7g066580 54.167 72 29 1 341 412 376 443 2.19e-13 72.0
MS.gene055069.t1 MTR_7g063820 39.062 320 175 9 17 322 11 324 1.20e-51 181
MS.gene055069.t1 MTR_7g063820 47.945 73 37 1 340 411 407 479 3.00e-11 65.5
MS.gene055069.t1 MTR_7g063920 36.503 326 137 5 17 322 12 287 9.51e-51 177
MS.gene055069.t1 MTR_7g063920 47.887 71 37 0 340 410 360 430 1.07e-13 72.8
MS.gene055069.t1 MTR_4g019310 31.263 483 236 14 16 406 8 486 4.22e-47 169
MS.gene055069.t1 MTR_7g066280 32.195 410 168 14 95 412 1 392 3.91e-44 159
MS.gene055069.t1 MTR_4g019340 29.487 468 239 13 17 398 39 501 5.75e-37 141
MS.gene055069.t1 MTR_3g065200 33.871 310 151 10 15 317 2 264 1.21e-35 137
MS.gene055069.t1 MTR_2g029400 32.288 319 141 7 15 322 13 267 8.97e-35 133
MS.gene055069.t1 MTR_2g029400 25.444 169 109 3 253 404 15 183 2.10e-11 65.9
MS.gene055069.t1 MTR_2g029400 53.226 62 29 0 338 399 343 404 3.89e-11 64.7
MS.gene055069.t1 MTR_7g062270 44.118 170 85 4 17 178 11 178 5.02e-34 131
MS.gene055069.t1 MTR_4g017410 26.839 503 239 14 14 411 7 485 6.46e-34 132
MS.gene055069.t1 MTR_7g063720 37.118 229 90 6 234 413 5 228 1.05e-33 126
MS.gene055069.t1 MTR_4g017470 30.612 343 174 9 17 334 13 316 1.47e-30 123
MS.gene055069.t1 MTR_4g017830 30.769 351 215 12 17 343 13 359 6.44e-30 121
MS.gene055069.t1 MTR_4g017830 45.833 72 39 0 339 410 430 501 9.62e-11 63.9
MS.gene055069.t1 MTR_4g017440 29.462 353 209 10 14 334 12 356 5.03e-29 119
MS.gene055069.t1 MTR_4g017610 29.846 325 200 9 14 314 11 331 1.21e-26 111
MS.gene055069.t1 MTR_7g066680 32.661 248 73 4 253 406 87 334 5.72e-26 107
MS.gene055069.t1 MTR_7g066390 46.400 125 61 2 293 412 1 124 2.45e-22 93.2
MS.gene055069.t1 MTR_8g023240 27.164 335 189 12 8 313 25 333 2.64e-19 90.5
MS.gene055069.t1 MTR_7g063690 30.216 278 111 10 17 279 13 222 7.01e-18 83.2
MS.gene055069.t1 MTR_2g067310 38.961 154 59 7 27 179 58 177 8.69e-18 82.8
MS.gene055069.t1 MTR_8g445860 31.280 211 121 7 7 202 4 205 1.80e-15 75.9
MS.gene055069.t1 MTR_4g019330 34.211 152 84 4 266 406 32 178 3.11e-14 71.2
MS.gene055069.t1 MTR_7g063850 44.156 77 43 0 343 419 215 291 1.18e-13 71.6
MS.gene055069.t1 MTR_7g063850 47.826 69 31 1 255 323 69 132 7.44e-11 63.2
MS.gene055069.t1 MTR_4g019240 30.178 169 97 4 244 410 5 154 2.68e-13 68.6
MS.gene055069.t1 MTR_7g063760 44.444 72 39 1 346 416 2 73 3.07e-13 65.1
MS.gene055069.t1 MTR_0150s0010 29.808 208 117 7 14 202 8 205 1.28e-12 67.8
MS.gene055069.t1 MTR_1g115440 31.111 180 102 5 15 177 10 184 2.74e-12 66.6
MS.gene055069.t1 MTR_1g115450 43.023 86 44 1 14 99 5 85 3.58e-12 63.9
MS.gene055069.t1 MTR_1g115455 38.372 86 48 1 14 99 7 87 6.98e-11 62.4
MS.gene055069.t1 MTR_7g100420 47.059 68 32 1 17 80 40 107 8.59e-11 63.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene055069.t1 AT3G09140 30.375 507 233 14 14 415 7 498 1.32e-45 165
MS.gene055069.t1 AT3G09140 28.625 531 239 13 14 415 7 526 1.95e-43 159
MS.gene055069.t1 AT5G01150 26.947 475 265 8 16 411 9 480 4.56e-43 158
MS.gene055069.t1 AT5G01120 27.823 496 255 11 17 419 10 495 2.12e-40 150
MS.gene055069.t1 AT5G01130 29.464 448 243 11 16 406 9 440 3.73e-40 149
MS.gene055069.t1 AT3G09110 29.598 348 202 6 16 337 9 339 1.14e-36 137
MS.gene055069.t1 AT5G01140 25.800 469 260 11 16 416 9 457 7.44e-34 132
MS.gene055069.t1 AT5G37320 26.891 476 262 14 17 411 10 480 9.52e-33 129
MS.gene055069.t1 AT3G09120 29.464 336 174 9 11 306 1 313 1.99e-31 122
MS.gene055069.t1 AT5G43240 30.518 367 208 9 17 347 10 365 7.46e-30 121
MS.gene055069.t1 AT5G43240 30.518 367 208 9 17 347 10 365 7.46e-30 121
MS.gene055069.t1 AT5G43240 30.518 367 208 9 17 347 10 365 7.46e-30 121

Find 62 sgRNAs with CRISPR-Local

Find 300 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CAAAGTTTCTGTGAGAATTT+TGG 0.198652 7.4:-38010347 MS.gene055069:CDS
CATTCTCCATGTTAGATTCT+TGG 0.214274 7.4:+38010215 None:intergenic
GAGAATTCCTCTCTCTGATT+TGG 0.271322 7.4:-38006631 MS.gene055069:CDS
ATTCAAGAGCATGGTTGATT+TGG 0.281674 7.4:-38006820 MS.gene055069:CDS
CAACAAAATATTGTATGTTA+TGG 0.288927 7.4:-38006949 MS.gene055069:CDS
TCAGAAAGTTGAGAATTATC+AGG 0.324294 7.4:+38009863 None:intergenic
CAAGAGTCCTTCAACATATA+TGG 0.334427 7.4:-38006718 MS.gene055069:CDS
GCCGGAACAAAACCATTCTT+AGG 0.339193 7.4:+38009926 None:intergenic
TTGTCCTCGGTTGCAAGAAA+TGG 0.341337 7.4:+38006226 None:intergenic
GGAGTTGAGAACATGTTAAA+TGG 0.344732 7.4:-38006873 MS.gene055069:CDS
TATCGGTCCATCGAATTAAT+TGG 0.350877 7.4:+38010097 None:intergenic
AATTCTCACAGAAACTTTGT+TGG 0.354382 7.4:+38010351 None:intergenic
CCAATATCCAATACATTAAC+AGG 0.365033 7.4:+38009466 None:intergenic
TCCAATACATTAACAGGTCT+TGG 0.365035 7.4:+38009472 None:intergenic
ATTTCTCTACTTAAGTATCT+TGG 0.374982 7.4:-38009833 MS.gene055069:CDS
AACAAAATATTGTATGTTAT+GGG 0.397927 7.4:-38006948 MS.gene055069:CDS
TCATCATCAGCTCTCACTAA+TGG 0.420383 7.4:-38006256 MS.gene055069:CDS
ATAAGAAAAGTTGCTGTTGC+CGG 0.427107 7.4:+38009908 None:intergenic
ACCAAGACCTGTTAATGTAT+TGG 0.428786 7.4:-38009473 MS.gene055069:CDS
CCTGTTAATGTATTGGATAT+TGG 0.430788 7.4:-38009466 MS.gene055069:CDS
GAAATTCTCTTTGTCAAGGT+TGG 0.453087 7.4:+38010153 None:intergenic
CTCACAGAAACTTTGTTGGA+TGG 0.453943 7.4:+38010355 None:intergenic
GAAGAAAGAATGATTAGCAT+TGG 0.463579 7.4:-38006609 MS.gene055069:CDS
GTTAAACACCATCCTAAGAA+TGG 0.463782 7.4:-38009938 MS.gene055069:CDS
TCTGTTACCATATATGTTGA+AGG 0.472437 7.4:+38006711 None:intergenic
TCAGCTCTCACTAATGGTCT+TGG 0.474809 7.4:-38006250 MS.gene055069:CDS
ATCTGAAATTCTCTTTGTCA+AGG 0.475564 7.4:+38010149 None:intergenic
AGTTTCTTAACTTTGCCGTT+AGG 0.480229 7.4:-38010259 MS.gene055069:CDS
TCACAGAAACTTTGTTGGAT+GGG 0.480522 7.4:+38010356 None:intergenic
CACTTGCAATTTCGCTTCGT+AGG 0.480527 7.4:+38009992 None:intergenic
AAAGGAAATCGCATCGGTTG+AGG 0.483342 7.4:+38006665 None:intergenic
GGTTCGACCAATTAATTCGA+TGG 0.505995 7.4:-38010104 MS.gene055069:CDS
ATCGCATCGGTTGAGGAACC+TGG 0.506090 7.4:+38006672 None:intergenic
GAAAGGCACAATAGAAGTAA+AGG 0.506485 7.4:-38006991 MS.gene055069:CDS
AACATGTTAAATGGAAACTC+TGG 0.509933 7.4:-38006864 MS.gene055069:CDS
ACTTGCAATTTCGCTTCGTA+GGG 0.517514 7.4:+38009993 None:intergenic
TTTATTTGTTCAAGCAGGGA+AGG 0.539556 7.4:-38010302 MS.gene055069:CDS
CTTTCTTCCAAATCAGAGAG+AGG 0.543946 7.4:+38006624 None:intergenic
TGTTCTCAACTCCTCCCAAA+GGG 0.549781 7.4:+38006883 None:intergenic
TTGGATATTGGTGGTAACAT+TGG 0.551335 7.4:-38009454 MS.gene055069:CDS
ATTGTATGTTATGGGTGAAG+AGG 0.557765 7.4:-38006940 MS.gene055069:CDS
GATTAGCATTGGTAATAAAG+AGG 0.562303 7.4:-38006598 MS.gene055069:intron
TTGGCTCACAAGTCTTGCAA+TGG 0.571997 7.4:+38010234 None:intergenic
TAGGGTTATCGATGCACACT+TGG 0.572247 7.4:+38010011 None:intergenic
AACATGGAGAATGTTCGTGT+TGG 0.583874 7.4:-38010205 MS.gene055069:CDS
TGGTCCATTTCTTGCAACCG+AGG 0.584203 7.4:-38006230 MS.gene055069:CDS
GAACAAAACCATTCTTAGGA+TGG 0.587566 7.4:+38009930 None:intergenic
AGATAATCTATTCAAGAGCA+TGG 0.593603 7.4:-38006829 MS.gene055069:CDS
AGTCAGAAAGGAAATCGCAT+CGG 0.594398 7.4:+38006659 None:intergenic
GTTAATGTATTGGATATTGG+TGG 0.611646 7.4:-38009463 MS.gene055069:CDS
GTTACGTAGGAAAGTAGCCA+TGG 0.616515 7.4:+38010393 None:intergenic
ATGTTCTCAACTCCTCCCAA+AGG 0.619718 7.4:+38006882 None:intergenic
AGTCTTGCAATGGTGCCTAA+CGG 0.620842 7.4:+38010244 None:intergenic
ACAGGAGCACAACTTGTGAA+AGG 0.631257 7.4:-38007008 MS.gene055069:intron
AAGCTTGTTATACGAAAGTG+TGG 0.633562 7.4:-38010176 MS.gene055069:CDS
CTAAGCAATTCAAGTTACGT+AGG 0.633894 7.4:+38010380 None:intergenic
GAAAAGAACCTCGTTATGTG+TGG 0.644069 7.4:-38009960 MS.gene055069:CDS
TACTATCAAGATAGTGACCG+TGG 0.646178 7.4:-38009795 MS.gene055069:CDS
GATGACTTAGTTATCACACC+AGG 0.650126 7.4:-38006690 MS.gene055069:CDS
CTCCTTACGAGTGACATCCA+CGG 0.666218 7.4:+38009778 None:intergenic
GTGTTTAACCACACATAACG+AGG 0.669189 7.4:+38009952 None:intergenic
TGTGAGCCAAGAATCTAACA+TGG 0.669681 7.4:-38010221 MS.gene055069:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATTATATGATAAATATTACA+TGG + chr7.4:38009145-38009164 None:intergenic 10.0%
!! AAATACTATCACAAATATTT+AGG - chr7.4:38008245-38008264 MS.gene055069:intron 15.0%
!! AACAAAATATTGTATGTTAT+GGG - chr7.4:38009653-38009672 MS.gene055069:intron 15.0%
!! AATAAATCTTCAAAAAAGAA+AGG + chr7.4:38008108-38008127 None:intergenic 15.0%
!!! AAAACATAAAAAGTATACAT+AGG - chr7.4:38009180-38009199 MS.gene055069:intron 15.0%
!!! AAACATAAAAAGTATACATA+GGG - chr7.4:38009181-38009200 MS.gene055069:intron 15.0%
!!! GATGAGTATTTTATTTAAAA+CGG - chr7.4:38007592-38007611 MS.gene055069:intron 15.0%
!!! GTTTTAAATAAAATACTCAT+CGG + chr7.4:38007593-38007612 None:intergenic 15.0%
!!! TGTGTAATTTTTTTTTTTTG+TGG - chr7.4:38010284-38010303 MS.gene055069:CDS 15.0%
!!! TTTTTATGTTTTGTTTTCTT+AGG + chr7.4:38009172-38009191 None:intergenic 15.0%
!! AAAAAATACTTATATCGAAG+AGG + chr7.4:38010112-38010131 None:intergenic 20.0%
!! ATATGTCTCAACTAATTATT+CGG - chr7.4:38008791-38008810 MS.gene055069:intron 20.0%
!! ATCACAAATATTTAGGTAAA+TGG - chr7.4:38008252-38008271 MS.gene055069:intron 20.0%
!! CAACAAAATATTGTATGTTA+TGG - chr7.4:38009652-38009671 MS.gene055069:intron 20.0%
!! GATCATTTATTTACAATGTA+TGG + chr7.4:38008026-38008045 None:intergenic 20.0%
!! TTAATGTTAAAAGGTAAATG+AGG + chr7.4:38009048-38009067 None:intergenic 20.0%
!! TTTCTCTTTACAAAAATTTG+TGG + chr7.4:38006985-38007004 None:intergenic 20.0%
!!! AACATACAATATTTTGTTGT+TGG + chr7.4:38009651-38009670 None:intergenic 20.0%
!!! AATAACTGTGGAAATTTTTT+GGG - chr7.4:38009565-38009584 MS.gene055069:intron 20.0%
!!! ACATATCATGACATTTTAAA+AGG - chr7.4:38007396-38007415 MS.gene055069:intron 20.0%
!!! AGCTTTTGAAAAAGAATTAT+TGG - chr7.4:38006476-38006495 MS.gene055069:intron 20.0%
!!! CATAAAAATTCTTTTGACAT+TGG - chr7.4:38010142-38010161 MS.gene055069:CDS 20.0%
!!! CATATCATGACATTTTAAAA+GGG - chr7.4:38007397-38007416 MS.gene055069:intron 20.0%
!!! GTTTTAGATATTTGCAATAT+CGG + chr7.4:38006524-38006543 None:intergenic 20.0%
!!! TATAAGGTATTACATATATG+AGG + chr7.4:38008868-38008887 None:intergenic 20.0%
!!! TATGGAATTTTAAATGGTTA+GGG + chr7.4:38007984-38008003 None:intergenic 20.0%
!!! TTTAAAATGTCATGATATGT+TGG + chr7.4:38007396-38007415 None:intergenic 20.0%
!!! TTTTCCAAAATTCTGATTTT+TGG - chr7.4:38009370-38009389 MS.gene055069:intron 20.0%
!!! TTTTGAAGATTTATTCTAGT+GGG - chr7.4:38008113-38008132 MS.gene055069:intron 20.0%
!!! TTTTTGAAGATTTATTCTAG+TGG - chr7.4:38008112-38008131 MS.gene055069:intron 20.0%
! AACAGAGGAATAATTAATTG+AGG + chr7.4:38007557-38007576 None:intergenic 25.0%
! AATTAATATCATACTTCTCG+TGG + chr7.4:38007504-38007523 None:intergenic 25.0%
! ACAAAGAAATTGTAAAGTGT+CGG + chr7.4:38008453-38008472 None:intergenic 25.0%
! AGGAGATTAAAAGAATGTAA+TGG + chr7.4:38007782-38007801 None:intergenic 25.0%
! ATTTCTCTACTTAAGTATCT+TGG - chr7.4:38006768-38006787 MS.gene055069:CDS 25.0%
! CTGAACGTTAAAACAATAAA+AGG - chr7.4:38007315-38007334 MS.gene055069:intron 25.0%
! GAATAATTAATTGAGGATTG+TGG + chr7.4:38007550-38007569 None:intergenic 25.0%
! GGAATCTGATTATTTCATTT+AGG - chr7.4:38008986-38009005 MS.gene055069:intron 25.0%
! GGAGATTAAAAGAATGTAAT+GGG + chr7.4:38007781-38007800 None:intergenic 25.0%
! GTCAAAACGATTAAACTATA+AGG + chr7.4:38008884-38008903 None:intergenic 25.0%
! TATAAAATTCTCAACACTCT+CGG - chr7.4:38006883-38006902 MS.gene055069:CDS 25.0%
! TATATTGTATTCAAAACACG+CGG + chr7.4:38007695-38007714 None:intergenic 25.0%
! TTAGTAAAAGTGAATAACTG+TGG - chr7.4:38009553-38009572 MS.gene055069:intron 25.0%
! TTTAACATTAACACCATACT+TGG - chr7.4:38009057-38009076 MS.gene055069:intron 25.0%
!! AACTCTGAAAAGTATAACAT+TGG - chr7.4:38007003-38007022 MS.gene055069:CDS 25.0%
!! ACTTGGTATGGAATTTTAAA+TGG + chr7.4:38007990-38008009 None:intergenic 25.0%
!! AGTATGGTGTTAATGTTAAA+AGG + chr7.4:38009057-38009076 None:intergenic 25.0%
!! CAAACCAAAAATCAGAATTT+TGG + chr7.4:38009377-38009396 None:intergenic 25.0%
!! CAAGTCAAATCTAATTTTGA+TGG - chr7.4:38009848-38009867 MS.gene055069:CDS 25.0%
!! CTATAGTAATTCAGCTTTTA+TGG - chr7.4:38008204-38008223 MS.gene055069:intron 25.0%
!! GTATGGAATTTTAAATGGTT+AGG + chr7.4:38007985-38008004 None:intergenic 25.0%
!! GTGATTTTGCAGAAAAATTA+TGG + chr7.4:38009224-38009243 None:intergenic 25.0%
!! TCCTATTTTCCTATACTAAT+GGG + chr7.4:38008485-38008504 None:intergenic 25.0%
!! TCTCTAAGAAAATAAGGAAT+GGG + chr7.4:38008559-38008578 None:intergenic 25.0%
!! TGAATTACTATAGAAAGTGT+CGG + chr7.4:38008197-38008216 None:intergenic 25.0%
!! TTCCTATTTTCCTATACTAA+TGG + chr7.4:38008486-38008505 None:intergenic 25.0%
!! TTTCTAGACTTAGATTTTTC+AGG + chr7.4:38007655-38007674 None:intergenic 25.0%
!!! AAAGTTTTATTTGTTCAAGC+AGG - chr7.4:38006294-38006313 MS.gene055069:intron 25.0%
!!! AAATTGAGGTCTTTTAATTG+TGG - chr7.4:38006564-38006583 MS.gene055069:intron 25.0%
!!! AAGTTTTATTTGTTCAAGCA+GGG - chr7.4:38006295-38006314 MS.gene055069:intron 25.0%
!!! AATTCTCATTTTAGTCAGAA+AGG + chr7.4:38009957-38009976 None:intergenic 25.0%
!!! ACATCTCATTTTGAAATAAG+AGG - chr7.4:38007177-38007196 MS.gene055069:intron 25.0%
!!! ATAGTTTAATCGTTTTGACA+AGG - chr7.4:38008885-38008904 MS.gene055069:intron 25.0%
!!! CTTTTATTGTTTTAACGTTC+AGG + chr7.4:38007317-38007336 None:intergenic 25.0%
!!! GAATAACTGTGGAAATTTTT+TGG - chr7.4:38009564-38009583 MS.gene055069:intron 25.0%
!!! GTGTTTTGAATACAATATAG+CGG - chr7.4:38007696-38007715 MS.gene055069:intron 25.0%
!!! TAGATTTTTCAGGATTTTTG+TGG + chr7.4:38007645-38007664 None:intergenic 25.0%
!!! TGATTTTTGGTTTGATGTTT+AGG - chr7.4:38009383-38009402 MS.gene055069:intron 25.0%
!!! TTAAAAGAATGTAATGGGTT+TGG + chr7.4:38007776-38007795 None:intergenic 25.0%
AACATGTTAAATGGAAACTC+TGG - chr7.4:38009737-38009756 MS.gene055069:intron 30.0%
AATTATGTGACTGTGGTTTA+GGG - chr7.4:38009289-38009308 MS.gene055069:intron 30.0%
AATTCTCACAGAAACTTTGT+TGG + chr7.4:38006253-38006272 None:intergenic 30.0%
AATTGTGAATTATGTGACTG+TGG - chr7.4:38009282-38009301 MS.gene055069:intron 30.0%
ACATAATTCACAATTTGCGT+TGG + chr7.4:38009277-38009296 None:intergenic 30.0%
ACATGTACTTGTCAATAACT+AGG + chr7.4:38010258-38010277 None:intergenic 30.0%
AGAAACAAACCATATTTCCT+TGG + chr7.4:38009501-38009520 None:intergenic 30.0%
AGATAATCTATTCAAGAGCA+TGG - chr7.4:38009772-38009791 MS.gene055069:intron 30.0%
AGGGATTTGACAAATTAGTA+AGG + chr7.4:38009453-38009472 None:intergenic 30.0%
ATACAATGCTTTAGCAAATC+TGG + chr7.4:38007861-38007880 None:intergenic 30.0%
ATAGGAAAATAGGAACTAAG+TGG - chr7.4:38008491-38008510 MS.gene055069:intron 30.0%
CAAATTAGTAAGGGCAAAAA+TGG + chr7.4:38009443-38009462 None:intergenic 30.0%
CATGTACTTGTCAATAACTA+GGG + chr7.4:38010257-38010276 None:intergenic 30.0%
CCAATATCCAATACATTAAC+AGG + chr7.4:38007138-38007157 None:intergenic 30.0%
CCTGTTAATGTATTGGATAT+TGG - chr7.4:38007135-38007154 MS.gene055069:intron 30.0%
CTTAGACAAAAAATCTGCTT+TGG + chr7.4:38009828-38009847 None:intergenic 30.0%
CTTCAAAAAAGAAAGGTCAT+AGG + chr7.4:38008101-38008120 None:intergenic 30.0%
GAAACAAACCATATTTCCTT+GGG + chr7.4:38009500-38009519 None:intergenic 30.0%
GAAGAAAGAATGATTAGCAT+TGG - chr7.4:38009992-38010011 MS.gene055069:CDS 30.0%
GGGATTTGACAAATTAGTAA+GGG + chr7.4:38009452-38009471 None:intergenic 30.0%
GTTAATGTATTGGATATTGG+TGG - chr7.4:38007138-38007157 MS.gene055069:intron 30.0%
TCAGAAAGTTGAGAATTATC+AGG + chr7.4:38006741-38006760 None:intergenic 30.0%
TCCCATTAGTATAGGAAAAT+AGG - chr7.4:38008481-38008500 MS.gene055069:intron 30.0%
TCTGTTACCATATATGTTGA+AGG + chr7.4:38009893-38009912 None:intergenic 30.0%
! ATATCTCTCTTTTGGCAAAA+TGG + chr7.4:38008775-38008794 None:intergenic 30.0%
! ATCTGAAATTCTCTTTGTCA+AGG + chr7.4:38006455-38006474 None:intergenic 30.0%
! CAAAGTTTCTGTGAGAATTT+TGG - chr7.4:38006254-38006273 MS.gene055069:CDS 30.0%
! GAATTTTAAATGGTTAGGGA+TGG + chr7.4:38007980-38007999 None:intergenic 30.0%
! GTCTCTAAGAAAATAAGGAA+TGG + chr7.4:38008560-38008579 None:intergenic 30.0%
! TATCTCTCTTTTGGCAAAAT+GGG + chr7.4:38008774-38008793 None:intergenic 30.0%
! TCATGGTCTCTAAGAAAATA+AGG + chr7.4:38008565-38008584 None:intergenic 30.0%
! TTGATGACACAGAAAAATTG+AGG - chr7.4:38006550-38006569 MS.gene055069:intron 30.0%
!! AAATTGTAAAGTGTCGGAAA+TGG + chr7.4:38008447-38008466 None:intergenic 30.0%
!! AATTGTAAAGTGTCGGAAAT+GGG + chr7.4:38008446-38008465 None:intergenic 30.0%
!! ATCTTCAAGTTGAATCATTG+TGG + chr7.4:38008649-38008668 None:intergenic 30.0%
!! GAATTTTGGTAGATGAAATG+AGG - chr7.4:38006268-38006287 MS.gene055069:CDS 30.0%
!! GATTAGCATTGGTAATAAAG+AGG - chr7.4:38010003-38010022 MS.gene055069:CDS 30.0%
!!! AAATTGGTTTTTGGATGTCA+TGG + chr7.4:38008582-38008601 None:intergenic 30.0%
!!! AATTTTTTGCGATTCCCTTT+GGG - chr7.4:38009704-38009723 MS.gene055069:intron 30.0%
!!! ATGTAATGGGTTTGGATTTT+AGG + chr7.4:38007768-38007787 None:intergenic 30.0%
!!! CACTTTTTTGGCATGATAAT+TGG + chr7.4:38008529-38008548 None:intergenic 30.0%
!!! TTTGGTTTTGGAGGTTAAAA+TGG + chr7.4:38008406-38008425 None:intergenic 30.0%
!!! TTTTTTTTTTGTGGAACTGC+AGG - chr7.4:38010293-38010312 MS.gene055069:CDS 30.0%
AATGCTTTAGCAAATCTGGA+AGG + chr7.4:38007857-38007876 None:intergenic 35.0%
ACCAAGACCTGTTAATGTAT+TGG - chr7.4:38007128-38007147 MS.gene055069:intron 35.0%
AGAAAGGTCATAGGTGAAAT+AGG + chr7.4:38008092-38008111 None:intergenic 35.0%
AGACAAAACAACCACTTTGA+AGG - chr7.4:38008160-38008179 MS.gene055069:intron 35.0%
AGATATTCTCGTCATTGAAG+GGG + chr7.4:38007921-38007940 None:intergenic 35.0%
AGTTTCTTAACTTTGCCGTT+AGG - chr7.4:38006342-38006361 MS.gene055069:intron 35.0%
ATGGAAAGTCCAAATGGAAA+AGG + chr7.4:38008734-38008753 None:intergenic 35.0%
ATGGATTCCACAATTGAGAA+AGG + chr7.4:38007214-38007233 None:intergenic 35.0%
ATGTTAGAAAGCAACGTCAT+AGG + chr7.4:38009473-38009492 None:intergenic 35.0%
ATTGTATGTTATGGGTGAAG+AGG - chr7.4:38009661-38009680 MS.gene055069:intron 35.0%
CAAGAGTCCTTCAACATATA+TGG - chr7.4:38009883-38009902 MS.gene055069:CDS 35.0%
CATTCATAACACAAACATGG+AGG - chr7.4:38007729-38007748 MS.gene055069:intron 35.0%
CATTCTCCATGTTAGATTCT+TGG + chr7.4:38006389-38006408 None:intergenic 35.0%
CTCCATGTTTGTGTTATGAA+TGG + chr7.4:38007731-38007750 None:intergenic 35.0%
GAAATTCTCTTTGTCAAGGT+TGG + chr7.4:38006451-38006470 None:intergenic 35.0%
GAACAAAACCATTCTTAGGA+TGG + chr7.4:38006674-38006693 None:intergenic 35.0%
GAATTATGTGACTGTGGTTT+AGG - chr7.4:38009288-38009307 MS.gene055069:intron 35.0%
GAGATATTCTCGTCATTGAA+GGG + chr7.4:38007922-38007941 None:intergenic 35.0%
GGAAAAATATATTGCCCATG+AGG + chr7.4:38007811-38007830 None:intergenic 35.0%
GGAGTTGAGAACATGTTAAA+TGG - chr7.4:38009728-38009747 MS.gene055069:intron 35.0%
GGCTGTTCAAAAAAAAACAG+AGG + chr7.4:38007572-38007591 None:intergenic 35.0%
GTTAAACACCATCCTAAGAA+TGG - chr7.4:38006663-38006682 MS.gene055069:CDS 35.0%
TAAACCAACTCCAAAAACAC+TGG - chr7.4:38008348-38008367 MS.gene055069:intron 35.0%
TAAGGGCAAAAATGGTAACT+TGG + chr7.4:38009435-38009454 None:intergenic 35.0%
TACTTGGTTAGACTTTCTCA+TGG + chr7.4:38008330-38008349 None:intergenic 35.0%
TATCGGTCCATCGAATTAAT+TGG + chr7.4:38006507-38006526 None:intergenic 35.0%
TCACAGAAACTTTGTTGGAT+GGG + chr7.4:38006248-38006267 None:intergenic 35.0%
TCCAATACATTAACAGGTCT+TGG + chr7.4:38007132-38007151 None:intergenic 35.0%
TCCTATACTAATGGGAATCT+CGG + chr7.4:38008477-38008496 None:intergenic 35.0%
TGATATGTTGGATTACAGTC+AGG + chr7.4:38007384-38007403 None:intergenic 35.0%
TGCCATTCATAACACAAACA+TGG - chr7.4:38007726-38007745 MS.gene055069:intron 35.0%
TGGAAAGTCCAAATGGAAAA+GGG + chr7.4:38008733-38008752 None:intergenic 35.0%
TGGATTCCACAATTGAGAAA+GGG + chr7.4:38007213-38007232 None:intergenic 35.0%
TGTTAGAAAGCAACGTCATA+GGG + chr7.4:38009472-38009491 None:intergenic 35.0%
TTACTAGCACTAACAACATC+CGG - chr7.4:38008668-38008687 MS.gene055069:intron 35.0%
TTTATTTGTTCAAGCAGGGA+AGG - chr7.4:38006299-38006318 MS.gene055069:intron 35.0%
TTTCTGTCATGTTCCAAGTA+TGG + chr7.4:38009073-38009092 None:intergenic 35.0%
! AAGAACTCTACCAGTGTTTT+TGG + chr7.4:38008361-38008380 None:intergenic 35.0%
! AGGAATGGTAGACTTTTATC+TGG + chr7.4:38007832-38007851 None:intergenic 35.0%
! ATAAGAAAAGTTGCTGTTGC+CGG + chr7.4:38006696-38006715 None:intergenic 35.0%
! ATCTCTCTTTTGGCAAAATG+GGG + chr7.4:38008773-38008792 None:intergenic 35.0%
! ATTCAAGAGCATGGTTGATT+TGG - chr7.4:38009781-38009800 MS.gene055069:intron 35.0%
! CTAAGCAATTCAAGTTACGT+AGG + chr7.4:38006224-38006243 None:intergenic 35.0%
! CTTTTACTAAAGTGAGCTAG+AGG + chr7.4:38009543-38009562 None:intergenic 35.0%
! GAAAGGCACAATAGAAGTAA+AGG - chr7.4:38009610-38009629 MS.gene055069:intron 35.0%
! GTTGAGACATATCTCTCTTT+TGG + chr7.4:38008783-38008802 None:intergenic 35.0%
! TATGTCGATGGCTTTTAATC+CGG + chr7.4:38008690-38008709 None:intergenic 35.0%
! TGACGTTGCTTTCTAACATT+AGG - chr7.4:38009474-38009493 MS.gene055069:CDS 35.0%
! TGTTTTCCCTTTCTCAATTG+TGG - chr7.4:38007204-38007223 MS.gene055069:intron 35.0%
! TTGGATATTGGTGGTAACAT+TGG - chr7.4:38007147-38007166 MS.gene055069:intron 35.0%
! TTTTGGCATGATAATTGGTG+CGG + chr7.4:38008524-38008543 None:intergenic 35.0%
!! AAGCTTGTTATACGAAAGTG+TGG - chr7.4:38006425-38006444 MS.gene055069:intron 35.0%
!! ATTGTAAAGTGTCGGAAATG+GGG + chr7.4:38008445-38008464 None:intergenic 35.0%
!! GTTTAATCGTTTTGACAAGG+TGG - chr7.4:38008888-38008907 MS.gene055069:intron 35.0%
!! GTTTGAGATTTTCTTGTCCT+CGG + chr7.4:38010391-38010410 None:intergenic 35.0%
!! TCAAAGTGGTTGTTTTGTCT+TGG + chr7.4:38008160-38008179 None:intergenic 35.0%
!!! ATGGGAGTGAAACACTTTTT+TGG + chr7.4:38008541-38008560 None:intergenic 35.0%
!!! GAAATTTTTTGGGCTGTTAC+AGG - chr7.4:38009575-38009594 MS.gene055069:intron 35.0%
!!! GAATTTTTTGCGATTCCCTT+TGG - chr7.4:38009703-38009722 MS.gene055069:intron 35.0%
!!! GTTTTTGGAGTTGGTTTACT+TGG + chr7.4:38008346-38008365 None:intergenic 35.0%
!!! TCCTAAGAATGGTTTTGTTC+CGG - chr7.4:38006674-38006693 MS.gene055069:CDS 35.0%
AAAGTCCAAATGGAAAAGGG+TGG + chr7.4:38008730-38008749 None:intergenic 40.0%
AACATGGAGAATGTTCGTGT+TGG - chr7.4:38006396-38006415 MS.gene055069:intron 40.0%
AAGTTGAATCATTGTGGTCG+AGG + chr7.4:38008643-38008662 None:intergenic 40.0%
AATCTCCTCTATCACCTCAT+GGG - chr7.4:38007794-38007813 MS.gene055069:intron 40.0%
AATGGAGGTCATTCATTGCT+TGG + chr7.4:38008388-38008407 None:intergenic 40.0%
ACATTAGGCCCAAGGAAATA+TGG - chr7.4:38009489-38009508 MS.gene055069:CDS 40.0%
ACTACCAAGAATTTGCCTTG+TGG - chr7.4:38008276-38008295 MS.gene055069:intron 40.0%
ACTTGCAATTTCGCTTCGTA+GGG + chr7.4:38006611-38006630 None:intergenic 40.0%
AGAGTTATGCTCCTTCAAAG+TGG + chr7.4:38008174-38008193 None:intergenic 40.0%
AGATCCACAAGGCAAATTCT+TGG + chr7.4:38008283-38008302 None:intergenic 40.0%
AGGGAACATATCGACACTAT+TGG + chr7.4:38007944-38007963 None:intergenic 40.0%
AGTCAGAAAGGAAATCGCAT+CGG + chr7.4:38009945-38009964 None:intergenic 40.0%
AGTTGAATCATTGTGGTCGA+GGG + chr7.4:38008642-38008661 None:intergenic 40.0%
ATTAGCGGGACATTCAAGAA+GGG + chr7.4:38008955-38008974 None:intergenic 40.0%
CTCACAGAAACTTTGTTGGA+TGG + chr7.4:38006249-38006268 None:intergenic 40.0%
CTTTCTTCCAAATCAGAGAG+AGG + chr7.4:38009980-38009999 None:intergenic 40.0%
GAAAAGAACCTCGTTATGTG+TGG - chr7.4:38006641-38006660 MS.gene055069:CDS 40.0%
GAGAATTCCTCTCTCTGATT+TGG - chr7.4:38009970-38009989 MS.gene055069:CDS 40.0%
GATGACTTAGTTATCACACC+AGG - chr7.4:38009911-38009930 MS.gene055069:CDS 40.0%
GGAGATATTCTCGTCATTGA+AGG + chr7.4:38007923-38007942 None:intergenic 40.0%
GGTTCGACCAATTAATTCGA+TGG - chr7.4:38006497-38006516 MS.gene055069:intron 40.0%
GTGTTTAACCACACATAACG+AGG + chr7.4:38006652-38006671 None:intergenic 40.0%
TAATCTCCTCTATCACCTCA+TGG - chr7.4:38007793-38007812 MS.gene055069:intron 40.0%
TACTATCAAGATAGTGACCG+TGG - chr7.4:38006806-38006825 MS.gene055069:CDS 40.0%
TCATCATCAGCTCTCACTAA+TGG - chr7.4:38010345-38010364 MS.gene055069:CDS 40.0%
TCCGAGATTCCCATTAGTAT+AGG - chr7.4:38008473-38008492 MS.gene055069:intron 40.0%
TGATCGATGGAAAGTCCAAA+TGG + chr7.4:38008740-38008759 None:intergenic 40.0%
TGTGAGCCAAGAATCTAACA+TGG - chr7.4:38006380-38006399 MS.gene055069:intron 40.0%
TGTTGCAAGTTAGATCCACA+AGG + chr7.4:38008294-38008313 None:intergenic 40.0%
TTTAGCAAATCTGGAAGGCT+AGG + chr7.4:38007852-38007871 None:intergenic 40.0%
TTTATGGCCTCACAAGATGA+GGG - chr7.4:38008220-38008239 MS.gene055069:intron 40.0%
TTTGCAAGTGGTACTTGGTA+TGG + chr7.4:38008002-38008021 None:intergenic 40.0%
! ACAATGTATGGCTTTGCAAG+TGG + chr7.4:38008014-38008033 None:intergenic 40.0%
! ACATTCAAGAAGGGTATGTG+GGG + chr7.4:38008946-38008965 None:intergenic 40.0%
! GACATTCAAGAAGGGTATGT+GGG + chr7.4:38008947-38008966 None:intergenic 40.0%
! GGTTGTGTTTTGTGTGATGA+GGG + chr7.4:38008062-38008081 None:intergenic 40.0%
! TAACTTGCAACACCACTCAT+CGG - chr7.4:38008302-38008321 MS.gene055069:intron 40.0%
! TATTTTCCCCTCATCTTGTG+AGG + chr7.4:38008230-38008249 None:intergenic 40.0%
! TGTTTTGTGTGATGAGGGAA+TGG + chr7.4:38008057-38008076 None:intergenic 40.0%
! TTTGACCACCCTTTTCCATT+TGG - chr7.4:38008722-38008741 MS.gene055069:intron 40.0%
! TTTTATGGCCTCACAAGATG+AGG - chr7.4:38008219-38008238 MS.gene055069:intron 40.0%
!! AATAGTGTCGATATGTTCCC+TGG - chr7.4:38007943-38007962 MS.gene055069:intron 40.0%
!! TAATCGTTTTGACAAGGTGG+AGG - chr7.4:38008891-38008910 MS.gene055069:intron 40.0%
!!! GGTTTTGGAGGTTAAAATGG+AGG + chr7.4:38008403-38008422 None:intergenic 40.0%
!!! TCACGTGGGAAATTGGTTTT+TGG + chr7.4:38008591-38008610 None:intergenic 40.0%
!!! TCTACCAGTGTTTTTGGAGT+TGG + chr7.4:38008355-38008374 None:intergenic 40.0%
AAGAGAGTGAGAGAACCTGA+GGG - chr7.4:38009323-38009342 MS.gene055069:intron 45.0%
ACACGCGGTGATTGTTGTAT+TGG + chr7.4:38007680-38007699 None:intergenic 45.0%
AGGGTGGTCAAAGCAAAGTA+TGG + chr7.4:38008714-38008733 None:intergenic 45.0%
AGTCTTGCAATGGTGCCTAA+CGG + chr7.4:38006360-38006379 None:intergenic 45.0%
ATAGGTGAAATAGGAGAGGC+GGG + chr7.4:38008083-38008102 None:intergenic 45.0%
ATGTGGGGGACAATCACTTA+TGG + chr7.4:38008931-38008950 None:intergenic 45.0%
ATGTTCTCAACTCCTCCCAA+AGG + chr7.4:38009722-38009741 None:intergenic 45.0%
CAAATCTGGAAGGCTAGGAA+TGG + chr7.4:38007847-38007866 None:intergenic 45.0%
CACGCGGTGATTGTTGTATT+GGG + chr7.4:38007679-38007698 None:intergenic 45.0%
CACTTGCAATTTCGCTTCGT+AGG + chr7.4:38006612-38006631 None:intergenic 45.0%
CATAGGTGAAATAGGAGAGG+CGG + chr7.4:38008084-38008103 None:intergenic 45.0%
CATTAGCGGGACATTCAAGA+AGG + chr7.4:38008956-38008975 None:intergenic 45.0%
CATTGAAGGGGAGAGGTAAA+GGG + chr7.4:38007909-38007928 None:intergenic 45.0%
CTGAGGGAGAATTGAAGTGA+GGG - chr7.4:38009339-38009358 MS.gene055069:intron 45.0%
GACAAGAATACGTCTGTCAG+AGG + chr7.4:38007087-38007106 None:intergenic 45.0%
GAGGTCATTCATTGCTTGGA+AGG + chr7.4:38008384-38008403 None:intergenic 45.0%
GCAAAGTATGGGTATGTCGA+TGG + chr7.4:38008702-38008721 None:intergenic 45.0%
GCCGGAACAAAACCATTCTT+AGG + chr7.4:38006678-38006697 None:intergenic 45.0%
GCTAGAGGAGAATTAGACAG+TGG + chr7.4:38009528-38009547 None:intergenic 45.0%
GCTTTCTAACATTAGGCCCA+AGG - chr7.4:38009481-38009500 MS.gene055069:CDS 45.0%
GGGTGGTCAAAGCAAAGTAT+GGG + chr7.4:38008713-38008732 None:intergenic 45.0%
GGTCATAGGTGAAATAGGAG+AGG + chr7.4:38008087-38008106 None:intergenic 45.0%
GTGTGATGAGGGAATGGAAT+TGG + chr7.4:38008051-38008070 None:intergenic 45.0%
TAGGGTTATCGATGCACACT+TGG + chr7.4:38006593-38006612 None:intergenic 45.0%
TATTGCCCATGAGGTGATAG+AGG + chr7.4:38007802-38007821 None:intergenic 45.0%
TCAGCTCTCACTAATGGTCT+TGG - chr7.4:38010351-38010370 MS.gene055069:CDS 45.0%
TCATTGAAGGGGAGAGGTAA+AGG + chr7.4:38007910-38007929 None:intergenic 45.0%
TGTCCCGCTAATGAACAAAG+CGG - chr7.4:38008963-38008982 MS.gene055069:intron 45.0%
TGTGGGGGACAATCACTTAT+GGG + chr7.4:38008930-38008949 None:intergenic 45.0%
TGTTCTCAACTCCTCCCAAA+GGG + chr7.4:38009721-38009740 None:intergenic 45.0%
TTATGGCCTCACAAGATGAG+GGG - chr7.4:38008221-38008240 MS.gene055069:intron 45.0%
TTGGCTCACAAGTCTTGCAA+TGG + chr7.4:38006370-38006389 None:intergenic 45.0%
TTGTCCTCGGTTGCAAGAAA+TGG + chr7.4:38010378-38010397 None:intergenic 45.0%
! ACAGGAGCACAACTTGTGAA+AGG - chr7.4:38009593-38009612 MS.gene055069:intron 45.0%
! AGTGAAGTGCTCCTTGTTCT+CGG - chr7.4:38007056-38007075 MS.gene055069:intron 45.0%
! AGTGTCGGAAATGGGGATTT+GGG + chr7.4:38008438-38008457 None:intergenic 45.0%
! ATGGCTTTGCAAGTGGTACT+TGG + chr7.4:38008007-38008026 None:intergenic 45.0%
! CATTCAAGAAGGGTATGTGG+GGG + chr7.4:38008945-38008964 None:intergenic 45.0%
! GGACATTCAAGAAGGGTATG+TGG + chr7.4:38008948-38008967 None:intergenic 45.0%
! GGGTTGTGTTTTGTGTGATG+AGG + chr7.4:38008063-38008082 None:intergenic 45.0%
! TCACAATTTGCGTTGGTACG+CGG + chr7.4:38009270-38009289 None:intergenic 45.0%
! TCTCTTTTGGCAAAATGGGG+TGG + chr7.4:38008770-38008789 None:intergenic 45.0%
! TTCCCCGCTTTGTTCATTAG+CGG + chr7.4:38008970-38008989 None:intergenic 45.0%
! TTTTTGCGATTCCCTTTGGG+AGG - chr7.4:38009707-38009726 MS.gene055069:intron 45.0%
!! AAAGGAAATCGCATCGGTTG+AGG + chr7.4:38009939-38009958 None:intergenic 45.0%
!! AAGTGTCGGAAATGGGGATT+TGG + chr7.4:38008439-38008458 None:intergenic 45.0%
!! TGAAGGGTGTTGTGTCTGTT+TGG + chr7.4:38007885-38007904 None:intergenic 45.0%
!!! AGGCTGGTATTTGGTTTTGG+AGG + chr7.4:38008415-38008434 None:intergenic 45.0%
!! TAAATTAAATTTATTAGAAA+TGG + chr7.4:38007233-38007252 None:intergenic 5.0%
ACGCGGTGGATACAAGTTCA+CGG + chr7.4:38009253-38009272 None:intergenic 50.0%
CCTCACTTCAATTCTCCCTC+AGG + chr7.4:38009341-38009360 None:intergenic 50.0%
CCTGAGGGAGAATTGAAGTG+AGG - chr7.4:38009338-38009357 MS.gene055069:intron 50.0%
CTCCTTACGAGTGACATCCA+CGG + chr7.4:38006826-38006845 None:intergenic 50.0%
GAAGAGAGTGAGAGAACCTG+AGG - chr7.4:38009322-38009341 MS.gene055069:intron 50.0%
GGATTTGGGAGGCTGGTATT+TGG + chr7.4:38008424-38008443 None:intergenic 50.0%
GGGAGAGGTAAAGGGTTGAA+GGG + chr7.4:38007901-38007920 None:intergenic 50.0%
GTCCCGCTAATGAACAAAGC+GGG - chr7.4:38008964-38008983 MS.gene055069:intron 50.0%
TCCCGCTAATGAACAAAGCG+GGG - chr7.4:38008965-38008984 MS.gene055069:intron 50.0%
TGCAAGGTCACGTGGGAAAT+TGG + chr7.4:38008598-38008617 None:intergenic 50.0%
TGGTCCATTTCTTGCAACCG+AGG - chr7.4:38010371-38010390 MS.gene055069:CDS 50.0%
TTCTCGTCATTGAAGGGGAG+AGG + chr7.4:38007916-38007935 None:intergenic 50.0%
TTTCTCATGGAGCCGATGAG+TGG + chr7.4:38008317-38008336 None:intergenic 50.0%
! CTTTTGGCAAAATGGGGTGG+CGG + chr7.4:38008767-38008786 None:intergenic 50.0%
! TCCCCGCTTTGTTCATTAGC+GGG + chr7.4:38008969-38008988 None:intergenic 50.0%
!! GGGAGGCTGGTATTTGGTTT+TGG + chr7.4:38008418-38008437 None:intergenic 50.0%
AGGTGAGATGCAAGGTCACG+TGG + chr7.4:38008606-38008625 None:intergenic 55.0%
CGTGGATGTCACTCGTAAGG+AGG - chr7.4:38006824-38006843 MS.gene055069:CDS 55.0%
GAAATGGGGATTTGGGAGGC+TGG + chr7.4:38008431-38008450 None:intergenic 55.0%
GACCGTGGATGTCACTCGTA+AGG - chr7.4:38006821-38006840 MS.gene055069:CDS 55.0%
GGATGGAGATCGTGCTTCCA+GGG + chr7.4:38007963-38007982 None:intergenic 55.0%
GGGGAGAGGTAAAGGGTTGA+AGG + chr7.4:38007902-38007921 None:intergenic 55.0%
GGTGAGATGCAAGGTCACGT+GGG + chr7.4:38008605-38008624 None:intergenic 55.0%
GTCGGAAATGGGGATTTGGG+AGG + chr7.4:38008435-38008454 None:intergenic 55.0%
TGCGGTCTAGGTGAGATGCA+AGG + chr7.4:38008614-38008633 None:intergenic 55.0%
TTGTGGTCGAGGGACATCTG+CGG + chr7.4:38008632-38008651 None:intergenic 55.0%
! CAATTTGCGTTGGTACGCGG+TGG + chr7.4:38009267-38009286 None:intergenic 55.0%
! GGGTGGCGGTTATTGATCGA+TGG + chr7.4:38008753-38008772 None:intergenic 55.0%
!! ATCGCATCGGTTGAGGAACC+TGG + chr7.4:38009932-38009951 None:intergenic 55.0%
GGGATGGAGATCGTGCTTCC+AGG + chr7.4:38007964-38007983 None:intergenic 60.0%
TCGAGGGACATCTGCGGTCT+AGG + chr7.4:38008626-38008645 None:intergenic 60.0%
!! CAGAGGTGTCGCCGAGAACA+AGG + chr7.4:38007070-38007089 None:intergenic 60.0%


Chromosome Type Strat End Strand Name
chr7.4 gene 38006210 38010413 38006210 ID=MS.gene055069
chr7.4 mRNA 38006210 38010413 38006210 ID=MS.gene055069.t1;Parent=MS.gene055069
chr7.4 exon 38009786 38010413 38009786 ID=MS.gene055069.t1.exon1;Parent=MS.gene055069.t1
chr7.4 CDS 38009786 38010413 38009786 ID=cds.MS.gene055069.t1;Parent=MS.gene055069.t1
chr7.4 exon 38009425 38009529 38009425 ID=MS.gene055069.t1.exon2;Parent=MS.gene055069.t1
chr7.4 CDS 38009425 38009529 38009425 ID=cds.MS.gene055069.t1;Parent=MS.gene055069.t1
chr7.4 exon 38006599 38007026 38006599 ID=MS.gene055069.t1.exon3;Parent=MS.gene055069.t1
chr7.4 CDS 38006599 38007026 38006599 ID=cds.MS.gene055069.t1;Parent=MS.gene055069.t1
chr7.4 exon 38006210 38006308 38006210 ID=MS.gene055069.t1.exon4;Parent=MS.gene055069.t1
chr7.4 CDS 38006210 38006308 38006210 ID=cds.MS.gene055069.t1;Parent=MS.gene055069.t1
Gene Sequence

>MS.gene055069

ATGGCTACTTTCCTACGTAACTTGAATTGCTTAGTCCCATCCAACAAAGTTTCTGTGAGAATTTTGGTAGATGAAATGAGGAACAAAGTTTTATTTGTTCAAGCAGGGAAGGACTTTGTTGATGTGTTGCTAAGTTTCTTAACTTTGCCGTTAGGCACCATTGCAAGACTTGTGAGCCAAGAATCTAACATGGAGAATGTTCGTGTTGGAAGCTTAAGCTTGTTATACGAAAGTGTGGCCAACCTTGACAAAGAGAATTTCAGATCAGCTTTTGAAAAAGAATTATTGGTTCGACCAATTAATTCGATGGACCGATATTGCAAATATCTAAAACTCAACATTGATGACACAGAAAAATTGAGGTCTTTTAATTGTGGCAACCAAGTGTGCATCGATAACCCTACGAAGCGAAATTGCAAGTGCTGCGAAAAGAAAAGAACCTCGTTATGTGTGGTTAAACACCATCCTAAGAATGGTTTTGTTCCGGCAACAGCAACTTTTCTTATCTCAGATGATTTGAATGTGAAGCCTGATAATTCTCAACTTTCTGAAAATAGCATTTCTCTACTTAAGTATCTTGGATGTGAAAACATAGATACTATCAAGATAGTGACCGTGGATGTCACTCGTAAGGAGGTATGTATCTATCTATCTATCTGTTTATCTGTCTGTTTATAAAATTCTCAACACTCTCGGATGATTTATGTCTAATGTGATTATCTTTGCTTTACAATTTGCTAAAATTAAAATTACGAATCTTGAAAGTATACAACCACAAATTTTTGTAAAGAGAAACTCTGAAAAGTATAACATTGGAAATTGCTTATTATTGTAGATACTAGATCTAGTGAAGTGCTCCTTGTTCTCGGCGACACCTCTGACAGACGTATTCTTGTCGAAGAAACTATATCTTGAGAAACCAAGACCTGTTAATGTATTGGATATTGGTGGTAACATTGGAGCTGAAACATCTCATTTTGAAATAAGAGGTAAATGTTTTCCCTTTCTCAATTGTGGAATCCATTTCTAATAAATTTAATTTAGTTTACTCAACTTTTCATAAAACTTTCAACATAAAATATAGTTTAAAATTTACACATTAAACCTGAACGTTAAAACAATAAAAGGTTACAAAACTCAAAACTATATAAATAGAAAATCTTAATCTAGACCTGACTGTAATCCAACATATCATGACATTTTAAAAGGGTTTATACTTGAAAAATGAAATCAACGAGAAGTAAGATATTAATTATAAAAACAGCTATGCTATATATCACGAAGTCTTTTTCCACGAGAAGTATGATATTAATTATAAAAATGTAAAATAAGCAGTTCCACAATCCTCAATTAATTATTCCTCTGTTTTTTTTTGAACAGCCGATGAGTATTTTATTTAAAACGGATGAAAATAAGTACAAGTAGTACTACACCACAAAAATCCTGAAAAATCTAAGTCTAGAAATCCCAATACAACAATCACCGCGTGTTTTGAATACAATATAGCGGCAAAGCATGCCATTCATAACACAAACATGGAGGTCGTGACATTCTACCTAAAATCCAAACCCATTACATTCTTTTAATCTCCTCTATCACCTCATGGGCAATATATTTTTCCAGATAAAAGTCTACCATTCCTAGCCTTCCAGATTTGCTAAAGCATTGTATGCCAAACAGACACAACACCCTTCAACCCTTTACCTCTCCCCTTCAATGACGAGAATATCTCCAATAGTGTCGATATGTTCCCTGGAAGCACGATCTCCATCCCTAACCATTTAAAATTCCATACCAAGTACCACTTGCAAAGCCATACATTGTAAATAAATGATCTTCCAATTCCATTCCCTCATCACACAAAACACAACCCGCCTCTCCTATTTCACCTATGACCTTTCTTTTTTGAAGATTTATTCTAGTGGGTAGACAGTTTAGAATCAATTGCCAAGACAAAACAACCACTTTGAAGGAGCATAACTCTCCGACACTTTCTATAGTAATTCAGCTTTTATGGCCTCACAAGATGAGGGGAAAATACTATCACAAATATTTAGGTAAATGGTACTACCAAGAATTTGCCTTGTGGATCTAACTTGCAACACCACTCATCGGCTCCATGAGAAAGTCTAACCAAGTAAACCAACTCCAAAAACACTGGTAGAGTTCTTCCTTCCAAGCAATGAATGACCTCCATTTTAACCTCCAAAACCAAATACCAGCCTCCCAAATCCCCATTTCCGACACTTTACAATTTCTTTGTTCCGAGATTCCCATTAGTATAGGAAAATAGGAACTAAGTGGATTCTAGCCGCACCAATTATCATGCCAAAAAAGTGTTTCACTCCCATTCCTTATTTTCTTAGAGACCATGACATCCAAAAACCAATTTCCCACGTGACCTTGCATCTCACCTAGACCGCAGATGTCCCTCGACCACAATGATTCAACTTGAAGATTACTAGCACTAACAACATCCGGATTAAAAGCCATCGACATACCCATACTTTGCTTTGACCACCCTTTTCCATTTGGACTTTCCATCGATCAATAACCGCCACCCCATTTTGCCAAAAGAGAGATATGTCTCAACTAATTATTCGGTCAATATGTTCTTATAGATTTACTTTATATTCTTCATTAGAGTAAAACTCACCTCATATATGTAATACCTTATAGTTTAATCGTTTTGACAAGGTGGAGGATTACTATTAACTCCCATAAGTGATTGTCCCCCACATACCCTTCTTGAATGTCCCGCTAATGAACAAAGCGGGGAATCTGATTATTTCATTTAGGTCATCTACACAAATAGAACAAGCATAATGAGTCAAACCTCATTTACCTTTTAACATTAACACCATACTTGGAACATGACAGAAAATTCATCATTGTTCATAAAATATTCAATTCTAAATCAATTATCATCAATCCATGTAATATTTATCATATAATACTTCCTAAGAAAACAAAACATAAAAAGTATACATAGGGTACAAAACAAGATTTTTCCATAATTTTTCTGCAAAATCACTGCGTACCGTGAACTTGTATCCACCGCGTACCAACGCAAATTGTGAATTATGTGACTGTGGTTTAGGGTTTGTGTGTAGAAGAGAGTGAGAGAACCTGAGGGAGAATTGAAGTGAGGGAAGAGAGTTTTTCCAAAATTCTGATTTTTGGTTTGATGTTTAGGATTATATTATTTATATAGTTGTGTGTCCAAGTTACCATTTTTGCCCTTACTAATTTGTCAAATCCCTATGACGTTGCTTTCTAACATTAGGCCCAAGGAAATATGGTTTGTTTCTTTGTCCACTGTCTAATTCTCCTCTAGCTCACTTTAGTAAAAGTGAATAACTGTGGAAATTTTTTGGGCTGTTACAGGAGCACAACTTGTGAAAGGCACAATAGAAGTAAAGGCAATGATGAGAAAATCCAACAACAAAATATTGTATGTTATGGGTGAAGAGGACTTTGCAGACTTGTTACTGAATTTTTTGCGATTCCCTTTGGGAGGAGTTGAGAACATGTTAAATGGAAACTCTGGTATAGACAACATAGATAATCTATTCAAGAGCATGGTTGATTTGGATCGTACAAGATATTTTAAATCCAAAGCAGATTTTTTGTCTAAGCAAGTCAAATCTAATTTTGATGGAAAACAAATTATCAAGAGTCCTTCAACATATATGGTAACAGATGACTTAGTTATCACACCAGGTTCCTCAACCGATGCGATTTCCTTTCTGACTAAAATGAGAATTCCTCTCTCTGATTTGGAAGAAAGAATGATTAGCATTGGTAATAAAGAGGTAAACTTGCAGTTGTCGATTTAATTTCTTTTATTTCGACAAAGCTGCTTAGAATTTATTTATTATTATGCTTGAGTTCAGATTCCTCTTCGATATAAGTATTTTTTAATTGTCAATCATAAAAATTCTTTTGACATTGGTCATAAATTATTTATAAAGTCACACGTATGAATGATTGTGATAATTGACAATGTAAAACATTTTGTACTGATAATGTATCAAAATTAAACCCTAGTTATTGACAAGTACATGTTTCTTATGTGTAATTTTTTTTTTTTGTGGAACTGCAGGCTCATAGTCTTCTGAAAGCTTCTCTGATCTCATCATCAGCTCTCACTAATGGTCTTGGTCCATTTCTTGCAACCGAGGACAAGAAAATCTCAAACTAA
Protein sequence

>MS.gene055069.t1

MATFLRNLNCLVPSNKVSVRILVDEMRNKVLFVQAGKDFVDVLLSFLTLPLGTIARLVSQESNMENVRVGSLSLLYESVANLDKENFRSAFEKELLVRPINSMDRYCKYLKLNIDDTEKLRSFNCGNQVCIDNPTKRNCKCCEKKRTSLCVVKHHPKNGFVPATATFLISDDLNVKPDNSQLSENSISLLKYLGCENIDTIKIVTVDVTHVFLSKKLYLEKPRPVNVLDIGGNIGAETSHFEIRGAQLVKGTIEVKAMMRKSNNKILYVMGEEDFADLLLNFLRFPLGGVENMLNGNSGIDNIDNLFKSMVDLDRTRYFKSKADFLSKQVKSNFDGKQIIKSPSTYMVTDDLVITPGSSTDAISFLTKMRIPLSDLEERMISIGNKEAHSLLKASLISSSALTNGLGPFLATEDKKISN