Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene055030.t1 | XP_003622949.1 | 63.5 | 496 | 146 | 8 | 5 | 494 | 6 | 472 | 2.90E-154 | 555.4 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene055030.t1 | G7L1B1 | 63.5 | 496 | 146 | 8 | 5 | 494 | 6 | 472 | 2.1e-154 | 555.4 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene055030.t1 | MTR_7g058710 | 63.306 | 496 | 147 | 8 | 5 | 494 | 6 | 472 | 0.0 | 591 |
MS.gene055030.t1 | MTR_7g066570 | 62.600 | 500 | 156 | 4 | 1 | 494 | 1 | 475 | 0.0 | 590 |
MS.gene055030.t1 | MTR_2g029400 | 60.446 | 493 | 103 | 8 | 1 | 489 | 1 | 405 | 0.0 | 526 |
MS.gene055030.t1 | MTR_2g029400 | 64.179 | 67 | 20 | 1 | 486 | 548 | 339 | 405 | 2.64e-16 | 81.6 |
MS.gene055030.t1 | MTR_7g012680 | 58.704 | 494 | 150 | 5 | 1 | 494 | 1 | 440 | 0.0 | 525 |
MS.gene055030.t1 | MTR_7g012680 | 52.055 | 73 | 31 | 1 | 487 | 555 | 370 | 442 | 3.20e-11 | 66.2 |
MS.gene055030.t1 | MTR_7g066680 | 82.432 | 296 | 21 | 1 | 230 | 494 | 38 | 333 | 2.98e-171 | 488 |
MS.gene055030.t1 | MTR_7g066680 | 47.368 | 114 | 22 | 3 | 486 | 561 | 231 | 344 | 1.61e-16 | 81.6 |
MS.gene055030.t1 | MTR_7g058700 | 57.928 | 473 | 108 | 5 | 26 | 494 | 531 | 916 | 1.99e-169 | 504 |
MS.gene055030.t1 | MTR_7g058700 | 48.515 | 101 | 48 | 1 | 463 | 559 | 822 | 922 | 1.17e-17 | 87.4 |
MS.gene055030.t1 | MTR_7g066260 | 51.136 | 528 | 204 | 8 | 6 | 526 | 7 | 487 | 1.39e-166 | 483 |
MS.gene055030.t1 | MTR_7g066260 | 68.182 | 66 | 17 | 1 | 494 | 555 | 394 | 459 | 5.85e-16 | 81.3 |
MS.gene055030.t1 | MTR_7g066260 | 26.383 | 235 | 160 | 6 | 268 | 493 | 5 | 235 | 7.30e-16 | 80.9 |
MS.gene055030.t1 | MTR_7g066340 | 55.328 | 488 | 172 | 8 | 8 | 494 | 6 | 448 | 5.27e-160 | 465 |
MS.gene055030.t1 | MTR_7g066340 | 64.407 | 59 | 21 | 0 | 496 | 554 | 391 | 449 | 6.45e-13 | 71.6 |
MS.gene055030.t1 | MTR_1g041315 | 52.749 | 491 | 184 | 10 | 1 | 483 | 1 | 451 | 8.02e-158 | 460 |
MS.gene055030.t1 | MTR_7g066580 | 53.183 | 487 | 165 | 10 | 20 | 492 | 1 | 438 | 1.15e-156 | 456 |
MS.gene055030.t1 | MTR_7g066350 | 53.737 | 495 | 164 | 12 | 10 | 494 | 5 | 444 | 6.69e-153 | 446 |
MS.gene055030.t1 | MTR_7g066350 | 61.972 | 71 | 23 | 1 | 488 | 554 | 375 | 445 | 9.35e-13 | 70.9 |
MS.gene055030.t1 | MTR_7g066400 | 48.871 | 487 | 185 | 8 | 10 | 494 | 8 | 432 | 2.81e-139 | 411 |
MS.gene055030.t1 | MTR_7g066400 | 57.746 | 71 | 26 | 1 | 488 | 554 | 363 | 433 | 1.77e-15 | 79.3 |
MS.gene055030.t1 | MTR_7g066430 | 46.029 | 491 | 241 | 6 | 14 | 494 | 4 | 480 | 1.04e-132 | 396 |
MS.gene055030.t1 | MTR_7g066430 | 62.712 | 59 | 22 | 0 | 496 | 554 | 423 | 481 | 1.88e-12 | 70.1 |
MS.gene055030.t1 | MTR_7g066430 | 25.000 | 256 | 156 | 6 | 4 | 246 | 247 | 479 | 2.83e-11 | 66.2 |
MS.gene055030.t1 | MTR_7g066290 | 49.299 | 499 | 174 | 12 | 2 | 494 | 3 | 428 | 4.90e-132 | 392 |
MS.gene055030.t1 | MTR_7g066290 | 63.235 | 68 | 25 | 0 | 487 | 554 | 362 | 429 | 1.58e-15 | 79.3 |
MS.gene055030.t1 | MTR_7g066290 | 26.848 | 257 | 159 | 8 | 271 | 510 | 8 | 252 | 7.65e-11 | 64.7 |
MS.gene055030.t1 | MTR_7g066360 | 47.921 | 505 | 191 | 12 | 1 | 494 | 1 | 444 | 3.35e-128 | 384 |
MS.gene055030.t1 | MTR_7g066360 | 55.405 | 74 | 29 | 1 | 486 | 555 | 373 | 446 | 1.29e-13 | 73.6 |
MS.gene055030.t1 | MTR_7g066410 | 44.732 | 503 | 249 | 8 | 15 | 494 | 11 | 507 | 1.31e-125 | 379 |
MS.gene055030.t1 | MTR_7g066410 | 28.125 | 256 | 150 | 8 | 2 | 246 | 274 | 506 | 1.64e-14 | 76.6 |
MS.gene055030.t1 | MTR_7g066310 | 47.023 | 487 | 143 | 11 | 11 | 494 | 4 | 378 | 8.61e-120 | 360 |
MS.gene055030.t1 | MTR_7g066310 | 66.102 | 59 | 20 | 0 | 496 | 554 | 321 | 379 | 8.96e-14 | 73.9 |
MS.gene055030.t1 | MTR_7g062300 | 38.200 | 500 | 265 | 10 | 5 | 494 | 3 | 468 | 5.28e-97 | 303 |
MS.gene055030.t1 | MTR_7g063900 | 39.960 | 503 | 263 | 11 | 4 | 494 | 2 | 477 | 6.03e-96 | 301 |
MS.gene055030.t1 | MTR_7g063900 | 27.376 | 263 | 165 | 10 | 272 | 521 | 4 | 253 | 1.56e-15 | 79.7 |
MS.gene055030.t1 | MTR_7g063880 | 41.502 | 506 | 235 | 18 | 1 | 494 | 1 | 457 | 5.05e-95 | 298 |
MS.gene055030.t1 | MTR_7g062280 | 37.228 | 505 | 273 | 11 | 6 | 494 | 4 | 480 | 2.06e-94 | 297 |
MS.gene055030.t1 | MTR_7g062280 | 55.556 | 63 | 28 | 0 | 497 | 559 | 424 | 486 | 6.98e-12 | 68.2 |
MS.gene055030.t1 | MTR_7g063660 | 38.000 | 500 | 257 | 12 | 10 | 494 | 5 | 466 | 3.06e-93 | 294 |
MS.gene055030.t1 | MTR_7g063660 | 29.452 | 292 | 149 | 12 | 273 | 542 | 4 | 260 | 3.71e-17 | 84.7 |
MS.gene055030.t1 | MTR_7g063820 | 39.474 | 494 | 268 | 13 | 8 | 494 | 4 | 473 | 6.65e-93 | 293 |
MS.gene055030.t1 | MTR_7g063890 | 41.010 | 495 | 252 | 11 | 13 | 494 | 26 | 493 | 4.47e-90 | 286 |
MS.gene055030.t1 | MTR_7g063840 | 36.706 | 504 | 267 | 15 | 1 | 494 | 1 | 462 | 2.16e-87 | 278 |
MS.gene055030.t1 | MTR_4g019310 | 35.742 | 512 | 270 | 15 | 11 | 494 | 5 | 485 | 2.65e-83 | 268 |
MS.gene055030.t1 | MTR_4g019310 | 27.160 | 243 | 151 | 7 | 272 | 493 | 2 | 239 | 6.08e-11 | 65.5 |
MS.gene055030.t1 | MTR_4g019310 | 28.634 | 227 | 123 | 8 | 10 | 218 | 262 | 467 | 6.30e-11 | 65.5 |
MS.gene055030.t1 | MTR_7g066280 | 41.452 | 427 | 183 | 8 | 93 | 494 | 1 | 385 | 2.07e-82 | 263 |
MS.gene055030.t1 | MTR_3g007740 | 37.172 | 495 | 233 | 11 | 13 | 494 | 8 | 437 | 3.02e-82 | 264 |
MS.gene055030.t1 | MTR_7g063920 | 35.569 | 492 | 249 | 10 | 4 | 494 | 1 | 425 | 4.12e-82 | 263 |
MS.gene055030.t1 | MTR_1g014060 | 58.850 | 226 | 78 | 3 | 23 | 248 | 9 | 219 | 9.77e-81 | 258 |
MS.gene055030.t1 | MTR_1g014060 | 53.571 | 196 | 73 | 3 | 299 | 494 | 202 | 379 | 2.66e-52 | 183 |
MS.gene055030.t1 | MTR_1g014060 | 61.667 | 60 | 23 | 0 | 496 | 555 | 322 | 381 | 2.51e-13 | 72.4 |
MS.gene055030.t1 | MTR_1g014060 | 26.923 | 208 | 136 | 7 | 285 | 484 | 9 | 208 | 2.78e-11 | 65.9 |
MS.gene055030.t1 | MTR_7g063830 | 36.095 | 507 | 242 | 15 | 8 | 500 | 4 | 442 | 1.77e-80 | 259 |
MS.gene055030.t1 | MTR_3g065200 | 35.699 | 479 | 229 | 11 | 14 | 486 | 3 | 408 | 1.77e-77 | 252 |
MS.gene055030.t1 | MTR_7g063670 | 35.306 | 490 | 248 | 11 | 15 | 494 | 16 | 446 | 8.28e-75 | 245 |
MS.gene055030.t1 | MTR_4g017440 | 33.716 | 522 | 293 | 13 | 1 | 494 | 1 | 497 | 5.77e-71 | 236 |
MS.gene055030.t1 | MTR_4g017610 | 34.646 | 508 | 269 | 14 | 7 | 492 | 6 | 472 | 1.32e-70 | 234 |
MS.gene055030.t1 | MTR_4g017610 | 27.500 | 240 | 155 | 6 | 269 | 493 | 4 | 239 | 5.15e-11 | 65.5 |
MS.gene055030.t1 | MTR_4g017830 | 33.333 | 525 | 286 | 17 | 4 | 494 | 2 | 496 | 2.19e-68 | 230 |
MS.gene055030.t1 | MTR_4g019340 | 33.733 | 501 | 266 | 13 | 15 | 487 | 39 | 501 | 2.29e-68 | 229 |
MS.gene055030.t1 | MTR_4g019340 | 33.333 | 114 | 69 | 3 | 4 | 117 | 293 | 399 | 6.26e-12 | 68.6 |
MS.gene055030.t1 | MTR_4g017410 | 33.333 | 549 | 264 | 18 | 8 | 511 | 3 | 494 | 2.49e-68 | 229 |
MS.gene055030.t1 | MTR_7g066480 | 41.691 | 343 | 169 | 7 | 13 | 348 | 15 | 333 | 7.51e-67 | 223 |
MS.gene055030.t1 | MTR_7g066480 | 61.765 | 68 | 26 | 0 | 427 | 494 | 349 | 416 | 1.02e-17 | 86.3 |
MS.gene055030.t1 | MTR_7g066490 | 41.108 | 343 | 155 | 8 | 14 | 348 | 16 | 319 | 1.49e-64 | 217 |
MS.gene055030.t1 | MTR_7g066490 | 61.765 | 68 | 26 | 0 | 427 | 494 | 335 | 402 | 2.73e-17 | 84.7 |
MS.gene055030.t1 | MTR_4g017470 | 30.263 | 532 | 281 | 12 | 4 | 504 | 1 | 473 | 1.28e-57 | 200 |
MS.gene055030.t1 | MTR_4g017550 | 33.333 | 489 | 253 | 17 | 41 | 494 | 18 | 468 | 2.19e-53 | 189 |
MS.gene055030.t1 | MTR_7g063720 | 41.176 | 221 | 104 | 4 | 278 | 494 | 23 | 221 | 7.57e-44 | 156 |
MS.gene055030.t1 | MTR_7g063720 | 24.786 | 234 | 139 | 6 | 14 | 246 | 23 | 220 | 1.36e-13 | 71.2 |
MS.gene055030.t1 | MTR_7g062270 | 40.704 | 199 | 103 | 4 | 1 | 193 | 1 | 190 | 5.08e-37 | 142 |
MS.gene055030.t1 | MTR_2g067310 | 45.614 | 171 | 50 | 4 | 26 | 196 | 59 | 186 | 3.93e-33 | 127 |
MS.gene055030.t1 | MTR_8g023240 | 25.440 | 511 | 316 | 18 | 15 | 507 | 38 | 501 | 7.01e-28 | 118 |
MS.gene055030.t1 | MTR_7g100420 | 32.641 | 337 | 192 | 9 | 164 | 496 | 89 | 394 | 2.30e-26 | 111 |
MS.gene055030.t1 | MTR_7g100420 | 66.667 | 42 | 14 | 0 | 15 | 56 | 40 | 81 | 1.74e-11 | 66.6 |
MS.gene055030.t1 | MTR_7g066390 | 39.773 | 176 | 47 | 4 | 319 | 494 | 1 | 117 | 2.31e-26 | 105 |
MS.gene055030.t1 | MTR_7g066390 | 61.538 | 65 | 21 | 1 | 494 | 554 | 54 | 118 | 2.33e-15 | 73.9 |
MS.gene055030.t1 | MTR_7g063850 | 29.841 | 315 | 170 | 11 | 190 | 494 | 4 | 277 | 7.79e-25 | 105 |
MS.gene055030.t1 | MTR_1g115440 | 31.128 | 257 | 149 | 7 | 4 | 251 | 1 | 238 | 9.35e-25 | 103 |
MS.gene055030.t1 | MTR_1g115440 | 31.356 | 236 | 139 | 6 | 272 | 492 | 5 | 232 | 7.33e-24 | 100 |
MS.gene055030.t1 | MTR_0150s0010 | 28.409 | 264 | 139 | 5 | 8 | 251 | 4 | 237 | 1.12e-21 | 94.7 |
MS.gene055030.t1 | MTR_0150s0010 | 31.858 | 226 | 141 | 7 | 277 | 492 | 9 | 231 | 2.44e-18 | 85.1 |
MS.gene055030.t1 | MTR_8g445860 | 26.908 | 249 | 151 | 5 | 14 | 253 | 13 | 239 | 1.40e-20 | 91.7 |
MS.gene055030.t1 | MTR_8g445860 | 31.278 | 227 | 136 | 8 | 278 | 492 | 13 | 231 | 3.06e-18 | 84.7 |
MS.gene055030.t1 | MTR_7g063690 | 33.951 | 162 | 86 | 5 | 145 | 305 | 81 | 222 | 1.44e-17 | 82.8 |
MS.gene055030.t1 | MTR_7g063690 | 62.500 | 48 | 18 | 0 | 15 | 62 | 13 | 60 | 1.15e-11 | 65.5 |
MS.gene055030.t1 | MTR_4g019240 | 40.000 | 115 | 59 | 4 | 10 | 116 | 9 | 121 | 8.28e-16 | 76.3 |
MS.gene055030.t1 | MTR_1g115450 | 37.209 | 86 | 49 | 1 | 14 | 99 | 7 | 87 | 1.44e-15 | 74.3 |
MS.gene055030.t1 | MTR_1g115455 | 39.535 | 86 | 47 | 1 | 14 | 99 | 9 | 89 | 6.28e-14 | 72.0 |
MS.gene055030.t1 | MTR_1g115470 | 37.374 | 99 | 55 | 2 | 12 | 108 | 4 | 97 | 1.26e-13 | 73.6 |
MS.gene055030.t1 | MTR_7g063760 | 51.613 | 62 | 29 | 1 | 434 | 494 | 1 | 62 | 4.63e-12 | 62.0 |
MS.gene055030.t1 | MTR_8g445920 | 34.831 | 89 | 53 | 1 | 8 | 96 | 4 | 87 | 1.28e-11 | 62.0 |
MS.gene055030.t1 | MTR_8g044890 | 34.831 | 89 | 53 | 1 | 8 | 96 | 4 | 87 | 1.28e-11 | 62.0 |
MS.gene055030.t1 | MTR_0150s0030 | 34.483 | 87 | 51 | 2 | 14 | 99 | 8 | 89 | 2.28e-11 | 63.9 |
MS.gene055030.t1 | MTR_7g063870 | 54.545 | 55 | 25 | 0 | 8 | 62 | 25 | 79 | 9.80e-11 | 62.8 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene055030.t1 | AT5G01120 | 33.000 | 500 | 302 | 11 | 11 | 496 | 6 | 486 | 1.28e-70 | 236 |
MS.gene055030.t1 | AT5G01150 | 31.800 | 500 | 284 | 10 | 14 | 492 | 9 | 472 | 3.54e-64 | 218 |
MS.gene055030.t1 | AT5G01150 | 24.583 | 240 | 153 | 7 | 273 | 498 | 4 | 229 | 9.30e-12 | 68.2 |
MS.gene055030.t1 | AT5G43240 | 31.166 | 523 | 285 | 13 | 11 | 496 | 6 | 490 | 8.86e-60 | 207 |
MS.gene055030.t1 | AT5G43240 | 31.166 | 523 | 285 | 13 | 11 | 496 | 6 | 490 | 8.86e-60 | 207 |
MS.gene055030.t1 | AT5G43240 | 31.166 | 523 | 285 | 13 | 11 | 496 | 6 | 490 | 8.86e-60 | 207 |
MS.gene055030.t1 | AT3G09140 | 30.174 | 517 | 292 | 13 | 11 | 493 | 6 | 487 | 3.19e-54 | 191 |
MS.gene055030.t1 | AT3G09140 | 30.524 | 534 | 296 | 15 | 11 | 493 | 6 | 515 | 1.82e-53 | 190 |
MS.gene055030.t1 | AT5G01130 | 30.962 | 478 | 280 | 9 | 14 | 491 | 9 | 436 | 5.68e-50 | 179 |
MS.gene055030.t1 | AT5G01130 | 25.847 | 236 | 145 | 8 | 271 | 493 | 3 | 221 | 6.72e-11 | 65.1 |
MS.gene055030.t1 | AT5G01140 | 29.000 | 500 | 295 | 11 | 1 | 494 | 1 | 446 | 3.11e-49 | 177 |
MS.gene055030.t1 | AT3G09110 | 32.927 | 328 | 202 | 5 | 14 | 340 | 9 | 319 | 5.31e-47 | 168 |
MS.gene055030.t1 | AT3G09120 | 32.523 | 329 | 197 | 6 | 11 | 332 | 3 | 313 | 3.33e-46 | 165 |
MS.gene055030.t1 | AT3G09120 | 26.190 | 252 | 154 | 7 | 275 | 506 | 3 | 242 | 9.78e-14 | 72.8 |
MS.gene055030.t1 | AT5G37320 | 28.543 | 501 | 287 | 17 | 21 | 494 | 18 | 474 | 1.02e-37 | 145 |
MS.gene055030.t1 | AT5G43240 | 27.371 | 369 | 196 | 11 | 163 | 496 | 15 | 346 | 1.89e-20 | 93.6 |
Find 77 sgRNAs with CRISPR-Local
Find 165 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CTGCAGCAGCATTTCCTTGC+AGG | 0.207573 | 7.4:+37540283 | None:intergenic |
TTAAATACGAAGTCAGTTAA+AGG | 0.223806 | 7.4:+37539766 | None:intergenic |
AATATTGAAGCAGTTCAATT+TGG | 0.301162 | 7.4:-37540368 | MS.gene055030:CDS |
TAAGCTTCCATAGAGCTTCT+TGG | 0.318711 | 7.4:+37540260 | None:intergenic |
ACAACTAAGTCATCTGTTAA+TGG | 0.328133 | 7.4:+37537992 | None:intergenic |
AGTTATATATAGAGAGGAAT+AGG | 0.338582 | 7.4:+37539893 | None:intergenic |
GGCAAGGTAACTGCAGAAAT+TGG | 0.346283 | 7.4:+37539382 | None:intergenic |
TAAATACGAAGTCAGTTAAA+GGG | 0.346351 | 7.4:+37539767 | None:intergenic |
GCAGGGTCTCAGCATTCTTA+AGG | 0.350444 | 7.4:-37538975 | MS.gene055030:intron |
CAAAATTACGTTGAGAGTTA+TGG | 0.356213 | 7.4:-37540510 | MS.gene055030:CDS |
GCTTCTTTACCTTGCCCTTA+GGG | 0.358047 | 7.4:-37540421 | MS.gene055030:CDS |
TGTGATATTAAATATATATC+TGG | 0.362387 | 7.4:+37539472 | None:intergenic |
ATCATACTTACTATAATTCC+CGG | 0.371009 | 7.4:-37539348 | MS.gene055030:CDS |
AGCTTCTTTACCTTGCCCTT+AGG | 0.372832 | 7.4:-37540422 | MS.gene055030:CDS |
GCTGCAGCCAAGAAGCTCTA+TGG | 0.379123 | 7.4:-37540267 | MS.gene055030:CDS |
CTCTATTCTTAAACTCTGGT+TGG | 0.385977 | 7.4:+37539707 | None:intergenic |
TCAACTTCTGCTTTGACAAA+TGG | 0.395017 | 7.4:-37538941 | MS.gene055030:intron |
GAGGAGAGGGTCTTTAGAAT+TGG | 0.397715 | 7.4:-37537902 | MS.gene055030:CDS |
ATTGTTGTGGTTCTGATGAT+AGG | 0.398351 | 7.4:-37539297 | MS.gene055030:CDS |
TCTTCTCTATTCTTAAACTC+TGG | 0.403389 | 7.4:+37539703 | None:intergenic |
TCAACATCTGCTTTGACAAA+TGG | 0.406997 | 7.4:-37537737 | MS.gene055030:CDS |
ACTGCAGAAATTGGTAAAGT+TGG | 0.422218 | 7.4:+37539391 | None:intergenic |
AGCTCAAATTGTGCTGCAAT+GGG | 0.458184 | 7.4:+37539421 | None:intergenic |
CGTATTACATATTATTGTTG+TGG | 0.466001 | 7.4:-37539310 | MS.gene055030:CDS |
CATTTCTCCTCATTAATGGT+TGG | 0.475275 | 7.4:+37537697 | None:intergenic |
GGAGTGTTGCATATGCTTCA+AGG | 0.486168 | 7.4:-37539550 | MS.gene055030:CDS |
CTTTAGAATTGGTTTGAATG+AGG | 0.493519 | 7.4:-37537891 | MS.gene055030:intron |
GAGCTCAAATTGTGCTGCAA+TGG | 0.502643 | 7.4:+37539420 | None:intergenic |
GAGTCTTGCAATAGTCCCTA+AGG | 0.503426 | 7.4:+37540406 | None:intergenic |
TTTAGGAAATGGCTTTGCTA+AGG | 0.504499 | 7.4:-37540060 | MS.gene055030:CDS |
AGTTGTGGAGAATTTGCAAA+AGG | 0.516231 | 7.4:-37539223 | MS.gene055030:CDS |
TAAGTATGATAATAATAGAC+AGG | 0.516367 | 7.4:+37539361 | None:intergenic |
TATGTTTGATGTGGAGGAGA+GGG | 0.520767 | 7.4:-37537915 | MS.gene055030:CDS |
CGTTCCTTTATCTGATGTAG+AGG | 0.525488 | 7.4:-37539116 | MS.gene055030:CDS |
GCACTTCGTGTGCGAGAAGT+GGG | 0.527979 | 7.4:-37540192 | MS.gene055030:CDS |
TACGAAGAGAGCGAATCCAC+CGG | 0.532890 | 7.4:+37539329 | None:intergenic |
TTCAACAAACAAAATCTCTC+CGG | 0.534156 | 7.4:+37539627 | None:intergenic |
TTTCTAACCTTCCCCTTGGG+GGG | 0.541458 | 7.4:-37539571 | MS.gene055030:CDS |
TATGAGAGTTATATATAGAG+AGG | 0.544984 | 7.4:+37539887 | None:intergenic |
TAGATGAGAAATAGCAGTGA+AGG | 0.545554 | 7.4:+37537955 | None:intergenic |
TAGAGAAGAAACATCTGAAG+AGG | 0.545921 | 7.4:-37539689 | MS.gene055030:CDS |
AAGCTTGAAATCACAAACAT+TGG | 0.547176 | 7.4:-37539960 | MS.gene055030:CDS |
AGCACTTCGTGTGCGAGAAG+TGG | 0.551108 | 7.4:-37540193 | MS.gene055030:CDS |
ACGAAGAGAGCGAATCCACC+GGG | 0.552296 | 7.4:+37539330 | None:intergenic |
TCGCACACGAAGTGCTGCAA+AGG | 0.553820 | 7.4:+37540200 | None:intergenic |
GGTTAGAATTGGTCTGAAAG+AGG | 0.556750 | 7.4:-37539086 | MS.gene055030:intron |
AGGAATCAAAAGTGCAGTTG+TGG | 0.559315 | 7.4:-37540128 | MS.gene055030:CDS |
TGAAATAGCATCGAAGGATG+AGG | 0.568512 | 7.4:+37539156 | None:intergenic |
GCTTCAAAATCATCAAGTTG+TGG | 0.571818 | 7.4:-37539238 | MS.gene055030:CDS |
AGATATATATTTAATATCAC+AGG | 0.573456 | 7.4:-37539470 | MS.gene055030:CDS |
AAAAGGACCATCAGTATACA+TGG | 0.573482 | 7.4:-37539206 | MS.gene055030:CDS |
ATACATGGTTACAGATGACT+TGG | 0.574559 | 7.4:-37539191 | MS.gene055030:CDS |
TCTGTATGCTGAAGCAGTGA+AGG | 0.574622 | 7.4:-37540465 | MS.gene055030:CDS |
AAATGTTCCTATGTTTGATG+TGG | 0.577025 | 7.4:-37537924 | MS.gene055030:CDS |
CTATGTTTGATGTGGAGGAG+AGG | 0.583877 | 7.4:-37537916 | MS.gene055030:CDS |
TGCAATAGTCCCTAAGGGCA+AGG | 0.589160 | 7.4:+37540412 | None:intergenic |
TGTTCCTATGTTTGATGTGG+AGG | 0.589451 | 7.4:-37537921 | MS.gene055030:CDS |
AAGAAACATCTGAAGAGGGT+AGG | 0.591438 | 7.4:-37539684 | MS.gene055030:CDS |
TGTCGAAATCAGCAAGCAAG+AGG | 0.593953 | 7.4:-37539919 | MS.gene055030:CDS |
CTCTCCTCCACATCAAACAT+AGG | 0.594531 | 7.4:+37537917 | None:intergenic |
ATAGCATCGAAGGATGAGGT+TGG | 0.598823 | 7.4:+37539160 | None:intergenic |
TAGATGTGAAATAGCATCGA+AGG | 0.600877 | 7.4:+37539150 | None:intergenic |
TCAAATTGTGCTGCAATGGG+AGG | 0.601665 | 7.4:+37539424 | None:intergenic |
AGAGAAGAAACATCTGAAGA+GGG | 0.601746 | 7.4:-37539688 | MS.gene055030:CDS |
TCTGTAACCATGTATACTGA+TGG | 0.602750 | 7.4:+37539199 | None:intergenic |
AATTACGTTGAGAGTTATGG+TGG | 0.607698 | 7.4:-37540507 | MS.gene055030:CDS |
AAATACGAAGTCAGTTAAAG+GGG | 0.611325 | 7.4:+37539768 | None:intergenic |
ATTTGTCAAAGCAGATGTTG+AGG | 0.617384 | 7.4:+37537739 | None:intergenic |
ATCATCAGAAATGATAAATG+TGG | 0.618933 | 7.4:+37540031 | None:intergenic |
ATAGCAGTGAAGGATGACAT+TGG | 0.632785 | 7.4:+37537965 | None:intergenic |
ATCAGAAATGATAAATGTGG+CGG | 0.637794 | 7.4:+37540034 | None:intergenic |
TTTATGCACAAATACCTGCA+AGG | 0.646419 | 7.4:-37540297 | MS.gene055030:CDS |
AGTCTTGCAATAGTCCCTAA+GGG | 0.648111 | 7.4:+37540407 | None:intergenic |
ATTTGTCAAAGCAGAAGTTG+AGG | 0.649252 | 7.4:+37538943 | None:intergenic |
ATGATAATAATAGACAGGCA+AGG | 0.650319 | 7.4:+37539366 | None:intergenic |
ATACTTACTATAATTCCCGG+TGG | 0.677154 | 7.4:-37539345 | MS.gene055030:CDS |
GATTGTGTTAGAAAGCAAAG+TGG | 0.712588 | 7.4:-37540170 | MS.gene055030:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AGATATATATTTAATATCAC+AGG | - | chr7.4:37538787-37538806 | MS.gene055030:intron | 15.0% |
!! | TAATGATTATTGTTAAGAAT+TGG | + | chr7.4:37539348-37539367 | None:intergenic | 15.0% |
!! | TGAATATAGAAAATCAATTA+TGG | + | chr7.4:37539531-37539550 | None:intergenic | 15.0% |
!! | TGTGATATTAAATATATATC+TGG | + | chr7.4:37538788-37538807 | None:intergenic | 15.0% |
!! | TTAAGATTAAAGAATTACTT+CGG | - | chr7.4:37539748-37539767 | MS.gene055030:CDS | 15.0% |
!! | AAATAACTCTCTAATACATT+TGG | - | chr7.4:37539575-37539594 | MS.gene055030:CDS | 20.0% |
!! | CTTTAATCTTAAACTCAAAT+TGG | + | chr7.4:37539740-37539759 | None:intergenic | 20.0% |
!! | TAAGTATGATAATAATAGAC+AGG | + | chr7.4:37538899-37538918 | None:intergenic | 20.0% |
!! | TGCGACATTAAATATATATT+TGG | + | chr7.4:37539973-37539992 | None:intergenic | 20.0% |
!!! | ATTGTTAGTTTTTTCTTTCA+AGG | + | chr7.4:37539635-37539654 | None:intergenic | 20.0% |
!!! | TAGAGAGTTATTTTATATCA+AGG | + | chr7.4:37539568-37539587 | None:intergenic | 20.0% |
!!! | TGTAAACAAATTTTTCATAG+AGG | + | chr7.4:37539396-37539415 | None:intergenic | 20.0% |
! | AATATTGAAGCAGTTCAATT+TGG | - | chr7.4:37537889-37537908 | MS.gene055030:intron | 25.0% |
! | AATGCGTGTAACTTTAAATT+TGG | - | chr7.4:37540186-37540205 | MS.gene055030:CDS | 25.0% |
! | AGTTATATATAGAGAGGAAT+AGG | + | chr7.4:37538367-37538386 | None:intergenic | 25.0% |
! | ATAACTGTTCCAAAAACATT+AGG | + | chr7.4:37538264-37538283 | None:intergenic | 25.0% |
! | ATCATACTTACTATAATTCC+CGG | - | chr7.4:37538909-37538928 | MS.gene055030:intron | 25.0% |
! | ATCATCAGAAATGATAAATG+TGG | + | chr7.4:37538229-37538248 | None:intergenic | 25.0% |
! | CGTATTACATATTATTGTTG+TGG | - | chr7.4:37538947-37538966 | MS.gene055030:CDS | 25.0% |
! | CTATTATTGTCATACTTACT+TGG | - | chr7.4:37540090-37540109 | MS.gene055030:CDS | 25.0% |
! | TAAATACGAAGTCAGTTAAA+GGG | + | chr7.4:37538493-37538512 | None:intergenic | 25.0% |
! | TAAGTATGACAATAATAGAC+AGG | + | chr7.4:37540088-37540107 | None:intergenic | 25.0% |
! | TATATATTTGGATTCAACTC+AGG | + | chr7.4:37539961-37539980 | None:intergenic | 25.0% |
! | TATGAGAGTTATATATAGAG+AGG | + | chr7.4:37538373-37538392 | None:intergenic | 25.0% |
! | TTAAATACGAAGTCAGTTAA+AGG | + | chr7.4:37538494-37538513 | None:intergenic | 25.0% |
! | TTATTTGTTTACATGTTGCA+GGG | - | chr7.4:37539265-37539284 | MS.gene055030:CDS | 25.0% |
! | TTGAATGAGGTAATAATTCA+CGG | - | chr7.4:37540379-37540398 | MS.gene055030:CDS | 25.0% |
! | TTTATTTGTTTACATGTTGC+AGG | - | chr7.4:37539264-37539283 | MS.gene055030:CDS | 25.0% |
!! | AAACTCAAAAATTCTTTTGG+TGG | + | chr7.4:37538180-37538199 | None:intergenic | 25.0% |
!! | AACTCAAAAATTCTTTTGGT+GGG | + | chr7.4:37538179-37538198 | None:intergenic | 25.0% |
!! | AGATTTTGTTCAATGAATCA+GGG | - | chr7.4:37539820-37539839 | MS.gene055030:intron | 25.0% |
!! | CAACTCATTATGATAATGTA+TGG | + | chr7.4:37540450-37540469 | None:intergenic | 25.0% |
!! | CCTAAACTCAAAAATTCTTT+TGG | + | chr7.4:37538183-37538202 | None:intergenic | 25.0% |
!! | TTTTCATAGAGGTAAATCAT+CGG | + | chr7.4:37539385-37539404 | None:intergenic | 25.0% |
!!! | CCAAAAGAATTTTTGAGTTT+AGG | - | chr7.4:37538180-37538199 | MS.gene055030:intron | 25.0% |
!!! | GAATTTTTGAGTTTAGGAAA+TGG | - | chr7.4:37538186-37538205 | MS.gene055030:intron | 25.0% |
!!! | TAAAGCACTGTAATAATGTA+TGG | + | chr7.4:37539248-37539267 | None:intergenic | 25.0% |
AAATACGAAGTCAGTTAAAG+GGG | + | chr7.4:37538492-37538511 | None:intergenic | 30.0% | |
AAATGTTCCTATGTTTGATG+TGG | - | chr7.4:37540333-37540352 | MS.gene055030:CDS | 30.0% | |
AAGCTTGAAATCACAAACAT+TGG | - | chr7.4:37538297-37538316 | MS.gene055030:intron | 30.0% | |
ACAACTAAGTCATCTGTTAA+TGG | + | chr7.4:37540268-37540287 | None:intergenic | 30.0% | |
ACTAGGAAAAACAATACGAA+TGG | + | chr7.4:37540158-37540177 | None:intergenic | 30.0% | |
ATCAGAAATGATAAATGTGG+CGG | + | chr7.4:37538226-37538245 | None:intergenic | 30.0% | |
ATGATAATAATAGACAGGCA+AGG | + | chr7.4:37538894-37538913 | None:intergenic | 30.0% | |
ATTAAAGAATTACTTCGGTC+GGG | - | chr7.4:37539753-37539772 | MS.gene055030:CDS | 30.0% | |
ATTCCTAAAAATGCTCAAAC+GGG | + | chr7.4:37538115-37538134 | None:intergenic | 30.0% | |
CAAAATTACGTTGAGAGTTA+TGG | - | chr7.4:37537747-37537766 | MS.gene055030:CDS | 30.0% | |
CTAGGAAAAACAATACGAAT+GGG | + | chr7.4:37540157-37540176 | None:intergenic | 30.0% | |
GAAAATCAATTATGGAGAGA+TGG | + | chr7.4:37539523-37539542 | None:intergenic | 30.0% | |
GATTAAAGAATTACTTCGGT+CGG | - | chr7.4:37539752-37539771 | MS.gene055030:CDS | 30.0% | |
GATTCCTAAAAATGCTCAAA+CGG | + | chr7.4:37538116-37538135 | None:intergenic | 30.0% | |
GTTTGTTTACATATGTTGCA+GGG | - | chr7.4:37540469-37540488 | MS.gene055030:CDS | 30.0% | |
TCTTCTCTATTCTTAAACTC+TGG | + | chr7.4:37538557-37538576 | None:intergenic | 30.0% | |
TGTTTGTTTACATATGTTGC+AGG | - | chr7.4:37540468-37540487 | MS.gene055030:CDS | 30.0% | |
TTCAACAAACAAAATCTCTC+CGG | + | chr7.4:37538633-37538652 | None:intergenic | 30.0% | |
TTTCTATATTCAACGCACTA+CGG | - | chr7.4:37539539-37539558 | MS.gene055030:CDS | 30.0% | |
! | ACTCAAAAATTCTTTTGGTG+GGG | + | chr7.4:37538178-37538197 | None:intergenic | 30.0% |
! | GAGATTTTGTTCAATGAATC+AGG | - | chr7.4:37539819-37539838 | MS.gene055030:intron | 30.0% |
! | GATTTTGTTCAATGAATCAG+GGG | - | chr7.4:37539821-37539840 | MS.gene055030:intron | 30.0% |
! | GTTTTGCAAAGAAAATCAAC+CGG | - | chr7.4:37538611-37538630 | MS.gene055030:intron | 30.0% |
! | TTTTCCTCTACATCAGATAA+AGG | + | chr7.4:37539148-37539167 | None:intergenic | 30.0% |
!! | AGATTTTGTTTGTTGAAGGA+GGG | - | chr7.4:37538636-37538655 | MS.gene055030:intron | 30.0% |
!! | CTTTAGAATTGGTTTGAATG+AGG | - | chr7.4:37540366-37540385 | MS.gene055030:CDS | 30.0% |
!!! | AGTTTTTTCTTTCAAGGATC+AGG | + | chr7.4:37539629-37539648 | None:intergenic | 30.0% |
!!! | ATTTCAAGCTTTTGAAGTAG+TGG | + | chr7.4:37538288-37538307 | None:intergenic | 30.0% |
!!! | GATTTTGAAGCAGAATACTT+AGG | + | chr7.4:37539010-37539029 | None:intergenic | 30.0% |
AAAAGGACCATCAGTATACA+TGG | - | chr7.4:37539051-37539070 | MS.gene055030:intron | 35.0% | |
AATTACGTTGAGAGTTATGG+TGG | - | chr7.4:37537750-37537769 | MS.gene055030:CDS | 35.0% | |
ACTGCAGAAATTGGTAAAGT+TGG | + | chr7.4:37538869-37538888 | None:intergenic | 35.0% | |
AGAGAAGAAACATCTGAAGA+GGG | - | chr7.4:37538569-37538588 | MS.gene055030:intron | 35.0% | |
AGTTGTGGAGAATTTGCAAA+AGG | - | chr7.4:37539034-37539053 | MS.gene055030:intron | 35.0% | |
AGTTGTGGAGAATTTGTCAA+AGG | - | chr7.4:37540241-37540260 | MS.gene055030:CDS | 35.0% | |
ATACATGGTTACAGATGACT+TGG | - | chr7.4:37539066-37539085 | MS.gene055030:intron | 35.0% | |
ATACTTACTATAATTCCCGG+TGG | - | chr7.4:37538912-37538931 | MS.gene055030:intron | 35.0% | |
ATCTGATGTAGAGGAAAAAG+TGG | - | chr7.4:37539150-37539169 | MS.gene055030:CDS | 35.0% | |
ATTTGTCAAAGCAGAAGTTG+AGG | + | chr7.4:37539317-37539336 | None:intergenic | 35.0% | |
ATTTGTCAAAGCAGATGTTG+AGG | + | chr7.4:37540521-37540540 | None:intergenic | 35.0% | |
CAAGGCTTATATTAGATTGC+TGG | + | chr7.4:37539674-37539693 | None:intergenic | 35.0% | |
CGATATATCAACTACACTAC+AGG | + | chr7.4:37539431-37539450 | None:intergenic | 35.0% | |
CTCTATTCTTAAACTCTGGT+TGG | + | chr7.4:37538553-37538572 | None:intergenic | 35.0% | |
GAGGAAAAAGTGGTTAGAAT+TGG | - | chr7.4:37539160-37539179 | MS.gene055030:CDS | 35.0% | |
GATTGTGTTAGAAAGCAAAG+TGG | - | chr7.4:37538087-37538106 | MS.gene055030:intron | 35.0% | |
GTCATACTTACTTGGATTCA+CGG | - | chr7.4:37540098-37540117 | MS.gene055030:CDS | 35.0% | |
TAGAGAAGAAACATCTGAAG+AGG | - | chr7.4:37538568-37538587 | MS.gene055030:intron | 35.0% | |
TAGATGAGAAATAGCAGTGA+AGG | + | chr7.4:37540305-37540324 | None:intergenic | 35.0% | |
TCAAATCAATTGTGCTGCAA+TGG | + | chr7.4:37540025-37540044 | None:intergenic | 35.0% | |
TCAACATCTGCTTTGACAAA+TGG | - | chr7.4:37540520-37540539 | MS.gene055030:CDS | 35.0% | |
TCAACTTCTGCTTTGACAAA+TGG | - | chr7.4:37539316-37539335 | MS.gene055030:CDS | 35.0% | |
TCTCATTACTTTCAGTCATC+TGG | + | chr7.4:37539784-37539803 | None:intergenic | 35.0% | |
TCTGTAACCATGTATACTGA+TGG | + | chr7.4:37539061-37539080 | None:intergenic | 35.0% | |
TTAAAGAATTACTTCGGTCG+GGG | - | chr7.4:37539754-37539773 | MS.gene055030:CDS | 35.0% | |
TTTATGCACAAATACCTGCA+AGG | - | chr7.4:37537960-37537979 | MS.gene055030:CDS | 35.0% | |
! | ACTGTGATGCCTAATGTTTT+TGG | - | chr7.4:37538252-37538271 | MS.gene055030:intron | 35.0% |
! | ATAGACAGGTAAGTTAGCTT+TGG | + | chr7.4:37540074-37540093 | None:intergenic | 35.0% |
! | GCTTCAAAATCATCAAGTTG+TGG | - | chr7.4:37539019-37539038 | MS.gene055030:intron | 35.0% |
! | TAGATGTGAAATAGCATCGA+AGG | + | chr7.4:37539110-37539129 | None:intergenic | 35.0% |
! | TTTAGGAAATGGCTTTGCTA+AGG | - | chr7.4:37538197-37538216 | MS.gene055030:intron | 35.0% |
! | TTTTCTTTCAAGGATCAGGT+AGG | + | chr7.4:37539625-37539644 | None:intergenic | 35.0% |
!! | AAACTCAAATTGGTTCGTCA+AGG | + | chr7.4:37539730-37539749 | None:intergenic | 35.0% |
!! | ATTGTTGTGGTTCTGATGAT+AGG | - | chr7.4:37538960-37538979 | MS.gene055030:CDS | 35.0% |
!! | GAGATTTTGTTTGTTGAAGG+AGG | - | chr7.4:37538635-37538654 | MS.gene055030:intron | 35.0% |
!! | GATTTTGTTTGTTGAAGGAG+GGG | - | chr7.4:37538637-37538656 | MS.gene055030:intron | 35.0% |
!! | GGAGAGATTTTGTTTGTTGA+AGG | - | chr7.4:37538632-37538651 | MS.gene055030:intron | 35.0% |
!! | TAGACAGGTAAGTTAGCTTT+GGG | + | chr7.4:37540073-37540092 | None:intergenic | 35.0% |
AAGAAACATCTGAAGAGGGT+AGG | - | chr7.4:37538573-37538592 | MS.gene055030:intron | 40.0% | |
AAGATGAAGTCTGTCACTCA+AGG | + | chr7.4:37539692-37539711 | None:intergenic | 40.0% | |
ACACGCATTTCACTAGAACT+AGG | + | chr7.4:37540175-37540194 | None:intergenic | 40.0% | |
AGCTCAAATTGTGCTGCAAT+GGG | + | chr7.4:37538839-37538858 | None:intergenic | 40.0% | |
AGTCTTGCAATAGTCCCTAA+GGG | + | chr7.4:37537853-37537872 | None:intergenic | 40.0% | |
ATAGCAGTGAAGGATGACAT+TGG | + | chr7.4:37540295-37540314 | None:intergenic | 40.0% | |
ATATGTAACACTGCTCCCAA+GGG | + | chr7.4:37539885-37539904 | None:intergenic | 40.0% | |
ATCAATTGTGCTGCAATGGT+AGG | + | chr7.4:37540021-37540040 | None:intergenic | 40.0% | |
CGTTCCTTTATCTGATGTAG+AGG | - | chr7.4:37539141-37539160 | MS.gene055030:CDS | 40.0% | |
GAGTGACAGACTTCATCTTT+AGG | - | chr7.4:37539693-37539712 | MS.gene055030:CDS | 40.0% | |
GCAGTGTTACATATGCTTCA+AGG | - | chr7.4:37539891-37539910 | MS.gene055030:CDS | 40.0% | |
TAAAGAATTACTTCGGTCGG+GGG | - | chr7.4:37539755-37539774 | MS.gene055030:CDS | 40.0% | |
TAAGCTTCCATAGAGCTTCT+TGG | + | chr7.4:37538000-37538019 | None:intergenic | 40.0% | |
TATGTTTGATGTGGAGGAGA+GGG | - | chr7.4:37540342-37540361 | MS.gene055030:CDS | 40.0% | |
TGTTCCTATGTTTGATGTGG+AGG | - | chr7.4:37540336-37540355 | MS.gene055030:CDS | 40.0% | |
TTGTTCAATGAATCAGGGGT+TGG | - | chr7.4:37539825-37539844 | MS.gene055030:intron | 40.0% | |
! | AGGAATCAAAAGTGCAGTTG+TGG | - | chr7.4:37538129-37538148 | MS.gene055030:intron | 40.0% |
! | AGTTTTCTAACCTTCCCCTT+GGG | - | chr7.4:37538683-37538702 | MS.gene055030:intron | 40.0% |
! | AGTTTTCTCACTTTCCCCTT+GGG | - | chr7.4:37539867-37539886 | MS.gene055030:intron | 40.0% |
! | GATCTTGAAGCAGAGTACTT+CGG | + | chr7.4:37540217-37540236 | None:intergenic | 40.0% |
! | GCTTCAAGATCATCAAGTTG+TGG | - | chr7.4:37540226-37540245 | MS.gene055030:CDS | 40.0% |
! | GGTTAGAATTGGTCTGAAAG+AGG | - | chr7.4:37539171-37539190 | MS.gene055030:CDS | 40.0% |
! | TAGTTTTCTAACCTTCCCCT+TGG | - | chr7.4:37538682-37538701 | MS.gene055030:intron | 40.0% |
! | TGAAATAGCATCGAAGGATG+AGG | + | chr7.4:37539104-37539123 | None:intergenic | 40.0% |
!! | AGACAGGTAAGTTAGCTTTG+GGG | + | chr7.4:37540072-37540091 | None:intergenic | 40.0% |
AGCTTCTTTACCTTGCCCTT+AGG | - | chr7.4:37537835-37537854 | MS.gene055030:intron | 45.0% | |
CATATGTAACACTGCTCCCA+AGG | + | chr7.4:37539886-37539905 | None:intergenic | 45.0% | |
CTATGTTTGATGTGGAGGAG+AGG | - | chr7.4:37540341-37540360 | MS.gene055030:CDS | 45.0% | |
CTCTCCTCCACATCAAACAT+AGG | + | chr7.4:37540343-37540362 | None:intergenic | 45.0% | |
GAGCTCAAATTGTGCTGCAA+TGG | + | chr7.4:37538840-37538859 | None:intergenic | 45.0% | |
GAGTCTTGCAATAGTCCCTA+AGG | + | chr7.4:37537854-37537873 | None:intergenic | 45.0% | |
GCTTCTTTACCTTGCCCTTA+GGG | - | chr7.4:37537836-37537855 | MS.gene055030:intron | 45.0% | |
GGCAAGGTAACTGCAGAAAT+TGG | + | chr7.4:37538878-37538897 | None:intergenic | 45.0% | |
TATGTAACACTGCTCCCAAG+GGG | + | chr7.4:37539884-37539903 | None:intergenic | 45.0% | |
TCAAATTGTGCTGCAATGGG+AGG | + | chr7.4:37538836-37538855 | None:intergenic | 45.0% | |
TCTGTATGCTGAAGCAGTGA+AGG | - | chr7.4:37537792-37537811 | MS.gene055030:intron | 45.0% | |
TGTCGAAATCAGCAAGCAAG+AGG | - | chr7.4:37538338-37538357 | MS.gene055030:intron | 45.0% | |
! | ATAGCATCGAAGGATGAGGT+TGG | + | chr7.4:37539100-37539119 | None:intergenic | 45.0% |
! | CAGTTTTCTCACTTTCCCCT+TGG | - | chr7.4:37539866-37539885 | MS.gene055030:intron | 45.0% |
! | CTTTTGGTGGGGACATTACT+AGG | + | chr7.4:37538167-37538186 | None:intergenic | 45.0% |
! | GAGCCCGTTTGAGCATTTTT+AGG | - | chr7.4:37538109-37538128 | MS.gene055030:intron | 45.0% |
! | GTTTTCTAACCTTCCCCTTG+GGG | - | chr7.4:37538684-37538703 | MS.gene055030:intron | 45.0% |
! | TTTTCTAACCTTCCCCTTGG+GGG | - | chr7.4:37538685-37538704 | MS.gene055030:intron | 45.0% |
!! | AGGTAAGTTAGCTTTGGGGA+TGG | + | chr7.4:37540068-37540087 | None:intergenic | 45.0% |
!! | GAGGAGAGGGTCTTTAGAAT+TGG | - | chr7.4:37540355-37540374 | MS.gene055030:CDS | 45.0% |
!! | GGAGTGTTGCATATGCTTCA+AGG | - | chr7.4:37538707-37538726 | MS.gene055030:intron | 45.0% |
!! | GGTAAGTTAGCTTTGGGGAT+GGG | + | chr7.4:37540067-37540086 | None:intergenic | 45.0% |
ATATGCAACACTCCCCCCAA+GGG | + | chr7.4:37538701-37538720 | None:intergenic | 50.0% | |
GCAGGGTCTCAGCATTCTTA+AGG | - | chr7.4:37539282-37539301 | MS.gene055030:CDS | 50.0% | |
TACGAAGAGAGCGAATCCAC+CGG | + | chr7.4:37538931-37538950 | None:intergenic | 50.0% | |
TGCAATAGTCCCTAAGGGCA+AGG | + | chr7.4:37537848-37537867 | None:intergenic | 50.0% | |
TTTCTAACCTTCCCCTTGGG+GGG | - | chr7.4:37538686-37538705 | MS.gene055030:intron | 50.0% | |
ACGAAGAGAGCGAATCCACC+GGG | + | chr7.4:37538930-37538949 | None:intergenic | 55.0% | |
AGCACTTCGTGTGCGAGAAG+TGG | - | chr7.4:37538064-37538083 | MS.gene055030:intron | 55.0% | |
CATATGCAACACTCCCCCCA+AGG | + | chr7.4:37538702-37538721 | None:intergenic | 55.0% | |
CTGCAGCAGCATTTCCTTGC+AGG | + | chr7.4:37537977-37537996 | None:intergenic | 55.0% | |
GCACTTCGTGTGCGAGAAGT+GGG | - | chr7.4:37538065-37538084 | MS.gene055030:intron | 55.0% | |
GCTGCAGCCAAGAAGCTCTA+TGG | - | chr7.4:37537990-37538009 | MS.gene055030:CDS | 55.0% | |
TATGCAACACTCCCCCCAAG+GGG | + | chr7.4:37538700-37538719 | None:intergenic | 55.0% | |
!! | TCGCACACGAAGTGCTGCAA+AGG | + | chr7.4:37538060-37538079 | None:intergenic | 55.0% |
CAACACTCCCCCCAAGGGGA+AGG | + | chr7.4:37538696-37538715 | None:intergenic | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr7.4 | gene | 37537709 | 37540570 | 37537709 | ID=MS.gene055030 |
chr7.4 | mRNA | 37537709 | 37540570 | 37537709 | ID=MS.gene055030.t1;Parent=MS.gene055030 |
chr7.4 | exon | 37539884 | 37540570 | 37539884 | ID=MS.gene055030.t1.exon1;Parent=MS.gene055030.t1 |
chr7.4 | CDS | 37539884 | 37540570 | 37539884 | ID=cds.MS.gene055030.t1;Parent=MS.gene055030.t1 |
chr7.4 | exon | 37539087 | 37539827 | 37539087 | ID=MS.gene055030.t1.exon2;Parent=MS.gene055030.t1 |
chr7.4 | CDS | 37539087 | 37539827 | 37539087 | ID=cds.MS.gene055030.t1;Parent=MS.gene055030.t1 |
chr7.4 | exon | 37538942 | 37538993 | 37538942 | ID=MS.gene055030.t1.exon3;Parent=MS.gene055030.t1 |
chr7.4 | CDS | 37538942 | 37538993 | 37538942 | ID=cds.MS.gene055030.t1;Parent=MS.gene055030.t1 |
chr7.4 | exon | 37537892 | 37538016 | 37537892 | ID=MS.gene055030.t1.exon4;Parent=MS.gene055030.t1 |
chr7.4 | CDS | 37537892 | 37538016 | 37537892 | ID=cds.MS.gene055030.t1;Parent=MS.gene055030.t1 |
chr7.4 | exon | 37537709 | 37537789 | 37537709 | ID=MS.gene055030.t1.exon5;Parent=MS.gene055030.t1 |
chr7.4 | CDS | 37537709 | 37537789 | 37537709 | ID=cds.MS.gene055030.t1;Parent=MS.gene055030.t1 |
Gene Sequence |
Protein sequence |