Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene94776.t1 | XP_013449064.1 | 80 | 475 | 92 | 2 | 1 | 474 | 1 | 473 | 1.00E-202 | 716.5 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene94776.t1 | A0A072U0X9 | 80.0 | 475 | 92 | 2 | 1 | 474 | 1 | 473 | 7.2e-203 | 716.5 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene94776.t1 | MTR_7g066340 | 80.000 | 475 | 92 | 2 | 1 | 474 | 1 | 473 | 0.0 | 754 |
MS.gene94776.t1 | MTR_7g066310 | 67.811 | 466 | 84 | 3 | 9 | 474 | 4 | 403 | 0.0 | 601 |
MS.gene94776.t1 | MTR_7g066280 | 70.046 | 434 | 56 | 3 | 91 | 474 | 1 | 410 | 0.0 | 568 |
MS.gene94776.t1 | MTR_7g066350 | 63.326 | 469 | 150 | 9 | 1 | 458 | 1 | 458 | 0.0 | 554 |
MS.gene94776.t1 | MTR_1g041315 | 61.247 | 449 | 151 | 7 | 7 | 438 | 9 | 451 | 0.0 | 526 |
MS.gene94776.t1 | MTR_7g066260 | 58.491 | 477 | 175 | 10 | 6 | 468 | 9 | 476 | 5.05e-179 | 514 |
MS.gene94776.t1 | MTR_7g066570 | 52.372 | 548 | 200 | 13 | 3 | 512 | 5 | 529 | 1.48e-167 | 488 |
MS.gene94776.t1 | MTR_7g066400 | 54.777 | 471 | 156 | 9 | 1 | 451 | 1 | 434 | 1.05e-161 | 468 |
MS.gene94776.t1 | MTR_7g066360 | 54.737 | 475 | 184 | 11 | 6 | 468 | 8 | 463 | 3.70e-150 | 440 |
MS.gene94776.t1 | MTR_7g012680 | 52.008 | 473 | 186 | 9 | 3 | 460 | 5 | 451 | 8.27e-146 | 428 |
MS.gene94776.t1 | MTR_7g066290 | 53.913 | 460 | 168 | 11 | 6 | 455 | 9 | 434 | 3.25e-143 | 421 |
MS.gene94776.t1 | MTR_7g058710 | 50.000 | 496 | 187 | 12 | 1 | 454 | 1 | 477 | 5.32e-142 | 419 |
MS.gene94776.t1 | MTR_7g066580 | 45.749 | 494 | 170 | 12 | 18 | 460 | 1 | 447 | 5.43e-124 | 372 |
MS.gene94776.t1 | MTR_7g066580 | 28.906 | 256 | 137 | 10 | 4 | 235 | 207 | 441 | 2.85e-14 | 75.5 |
MS.gene94776.t1 | MTR_7g058700 | 48.222 | 450 | 155 | 9 | 24 | 454 | 531 | 921 | 2.45e-116 | 367 |
MS.gene94776.t1 | MTR_7g066410 | 40.748 | 508 | 231 | 11 | 12 | 454 | 10 | 512 | 8.69e-114 | 348 |
MS.gene94776.t1 | MTR_2g029400 | 44.492 | 472 | 151 | 10 | 6 | 442 | 8 | 403 | 7.41e-110 | 334 |
MS.gene94776.t1 | MTR_7g066430 | 41.141 | 491 | 232 | 10 | 12 | 454 | 4 | 485 | 1.53e-108 | 334 |
MS.gene94776.t1 | MTR_7g066480 | 40.220 | 455 | 217 | 9 | 11 | 456 | 15 | 423 | 2.11e-95 | 298 |
MS.gene94776.t1 | MTR_7g066490 | 42.282 | 447 | 203 | 12 | 12 | 456 | 16 | 409 | 3.99e-95 | 297 |
MS.gene94776.t1 | MTR_7g062280 | 36.581 | 503 | 252 | 14 | 1 | 454 | 1 | 485 | 4.70e-88 | 281 |
MS.gene94776.t1 | MTR_7g062300 | 37.214 | 481 | 259 | 13 | 1 | 450 | 1 | 469 | 2.07e-86 | 276 |
MS.gene94776.t1 | MTR_7g063820 | 37.827 | 497 | 247 | 14 | 1 | 454 | 1 | 478 | 6.48e-85 | 273 |
MS.gene94776.t1 | MTR_7g063660 | 35.366 | 492 | 250 | 15 | 7 | 454 | 4 | 471 | 1.64e-83 | 268 |
MS.gene94776.t1 | MTR_7g063900 | 39.754 | 488 | 234 | 17 | 12 | 454 | 10 | 482 | 5.61e-81 | 262 |
MS.gene94776.t1 | MTR_4g019310 | 36.527 | 501 | 246 | 14 | 6 | 450 | 2 | 486 | 3.77e-80 | 260 |
MS.gene94776.t1 | MTR_7g063830 | 36.247 | 469 | 253 | 11 | 1 | 454 | 1 | 438 | 8.25e-79 | 255 |
MS.gene94776.t1 | MTR_7g063880 | 36.810 | 489 | 249 | 16 | 1 | 455 | 1 | 463 | 8.40e-79 | 256 |
MS.gene94776.t1 | MTR_3g007740 | 37.393 | 468 | 236 | 15 | 11 | 454 | 8 | 442 | 1.93e-75 | 246 |
MS.gene94776.t1 | MTR_7g063890 | 38.037 | 489 | 242 | 15 | 11 | 454 | 26 | 498 | 7.81e-75 | 247 |
MS.gene94776.t1 | MTR_7g063890 | 25.225 | 222 | 131 | 7 | 260 | 448 | 23 | 242 | 7.32e-14 | 74.7 |
MS.gene94776.t1 | MTR_7g063840 | 35.234 | 491 | 257 | 16 | 1 | 454 | 1 | 467 | 9.32e-75 | 246 |
MS.gene94776.t1 | MTR_7g063920 | 34.937 | 478 | 239 | 10 | 1 | 454 | 1 | 430 | 1.02e-74 | 244 |
MS.gene94776.t1 | MTR_3g065200 | 36.188 | 467 | 204 | 16 | 10 | 441 | 1 | 408 | 3.39e-73 | 241 |
MS.gene94776.t1 | MTR_4g017830 | 33.333 | 531 | 269 | 18 | 1 | 465 | 1 | 512 | 5.33e-72 | 240 |
MS.gene94776.t1 | MTR_4g017440 | 32.738 | 504 | 261 | 13 | 13 | 454 | 15 | 502 | 9.16e-70 | 233 |
MS.gene94776.t1 | MTR_4g017440 | 25.379 | 264 | 145 | 7 | 259 | 475 | 9 | 267 | 2.35e-11 | 66.6 |
MS.gene94776.t1 | MTR_7g066680 | 45.819 | 299 | 99 | 5 | 216 | 451 | 37 | 335 | 1.57e-68 | 225 |
MS.gene94776.t1 | MTR_7g066680 | 27.523 | 218 | 142 | 8 | 6 | 218 | 80 | 286 | 1.57e-11 | 66.2 |
MS.gene94776.t1 | MTR_4g019340 | 33.056 | 481 | 257 | 11 | 13 | 444 | 39 | 503 | 5.00e-68 | 229 |
MS.gene94776.t1 | MTR_4g019340 | 26.728 | 217 | 142 | 5 | 12 | 228 | 303 | 502 | 1.79e-11 | 67.0 |
MS.gene94776.t1 | MTR_7g063670 | 34.716 | 458 | 261 | 11 | 13 | 454 | 16 | 451 | 3.42e-64 | 217 |
MS.gene94776.t1 | MTR_4g017610 | 33.745 | 486 | 248 | 17 | 15 | 451 | 16 | 476 | 8.17e-64 | 217 |
MS.gene94776.t1 | MTR_4g017610 | 26.891 | 238 | 132 | 7 | 257 | 452 | 6 | 243 | 1.14e-11 | 67.8 |
MS.gene94776.t1 | MTR_1g014060 | 53.425 | 219 | 90 | 6 | 21 | 235 | 9 | 219 | 1.93e-63 | 213 |
MS.gene94776.t1 | MTR_1g014060 | 45.304 | 181 | 85 | 3 | 294 | 460 | 210 | 390 | 1.65e-36 | 140 |
MS.gene94776.t1 | MTR_4g017410 | 32.665 | 499 | 269 | 20 | 6 | 454 | 3 | 484 | 1.24e-62 | 214 |
MS.gene94776.t1 | MTR_4g017470 | 29.845 | 516 | 254 | 14 | 1 | 454 | 1 | 470 | 5.41e-53 | 188 |
MS.gene94776.t1 | MTR_4g017470 | 26.939 | 245 | 140 | 8 | 257 | 479 | 5 | 232 | 6.31e-14 | 74.7 |
MS.gene94776.t1 | MTR_7g066390 | 56.329 | 158 | 41 | 1 | 305 | 462 | 1 | 130 | 7.43e-49 | 167 |
MS.gene94776.t1 | MTR_4g017550 | 30.189 | 477 | 243 | 20 | 41 | 452 | 20 | 471 | 4.10e-44 | 163 |
MS.gene94776.t1 | MTR_7g063720 | 37.264 | 212 | 116 | 2 | 258 | 454 | 17 | 226 | 6.70e-35 | 132 |
MS.gene94776.t1 | MTR_7g063720 | 29.289 | 239 | 128 | 11 | 2 | 233 | 16 | 220 | 2.14e-16 | 79.3 |
MS.gene94776.t1 | MTR_1g115440 | 34.538 | 249 | 141 | 7 | 1 | 238 | 1 | 238 | 3.46e-30 | 119 |
MS.gene94776.t1 | MTR_7g062270 | 38.506 | 174 | 102 | 4 | 13 | 185 | 11 | 180 | 3.67e-30 | 122 |
MS.gene94776.t1 | MTR_7g100420 | 34.056 | 323 | 160 | 11 | 166 | 454 | 94 | 397 | 6.84e-29 | 119 |
MS.gene94776.t1 | MTR_2g067310 | 43.931 | 173 | 51 | 5 | 23 | 193 | 58 | 186 | 9.07e-28 | 112 |
MS.gene94776.t1 | MTR_8g445860 | 30.328 | 244 | 152 | 5 | 4 | 239 | 5 | 238 | 1.43e-27 | 111 |
MS.gene94776.t1 | MTR_8g445860 | 27.477 | 222 | 124 | 5 | 262 | 447 | 11 | 231 | 2.46e-19 | 87.8 |
MS.gene94776.t1 | MTR_8g023240 | 22.913 | 563 | 340 | 18 | 13 | 530 | 38 | 551 | 2.91e-25 | 110 |
MS.gene94776.t1 | MTR_7g063690 | 29.643 | 280 | 126 | 7 | 13 | 291 | 13 | 222 | 4.88e-24 | 101 |
MS.gene94776.t1 | MTR_7g063850 | 32.877 | 219 | 111 | 5 | 267 | 454 | 69 | 282 | 5.10e-24 | 102 |
MS.gene94776.t1 | MTR_0150s0010 | 30.924 | 249 | 149 | 6 | 1 | 238 | 1 | 237 | 4.43e-22 | 95.9 |
MS.gene94776.t1 | MTR_4g019330 | 32.597 | 181 | 88 | 4 | 278 | 454 | 32 | 182 | 2.49e-18 | 83.6 |
MS.gene94776.t1 | MTR_1g115455 | 27.490 | 251 | 145 | 9 | 6 | 239 | 3 | 233 | 1.46e-16 | 79.7 |
MS.gene94776.t1 | MTR_1g115450 | 34.483 | 116 | 69 | 2 | 12 | 125 | 7 | 117 | 4.53e-14 | 70.1 |
MS.gene94776.t1 | MTR_1g115470 | 40.206 | 97 | 53 | 1 | 12 | 108 | 6 | 97 | 9.36e-14 | 73.9 |
MS.gene94776.t1 | MTR_4g019240 | 33.871 | 124 | 66 | 5 | 3 | 116 | 4 | 121 | 1.73e-13 | 69.7 |
MS.gene94776.t1 | MTR_1g115435 | 26.122 | 245 | 138 | 8 | 12 | 247 | 7 | 217 | 6.34e-13 | 68.9 |
MS.gene94776.t1 | MTR_7g063510 | 41.573 | 89 | 48 | 1 | 484 | 568 | 13 | 101 | 3.19e-12 | 63.5 |
MS.gene94776.t1 | MTR_0150s0030 | 36.264 | 91 | 52 | 2 | 6 | 95 | 2 | 87 | 9.41e-11 | 62.0 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene94776.t1 | AT3G09140 | 31.445 | 512 | 282 | 19 | 1 | 458 | 1 | 497 | 1.99e-55 | 195 |
MS.gene94776.t1 | AT5G01120 | 29.424 | 486 | 285 | 14 | 13 | 450 | 10 | 485 | 1.17e-51 | 185 |
MS.gene94776.t1 | AT3G09140 | 29.740 | 538 | 285 | 19 | 1 | 458 | 1 | 525 | 1.48e-51 | 185 |
MS.gene94776.t1 | AT5G01140 | 27.668 | 506 | 287 | 15 | 12 | 479 | 9 | 473 | 1.66e-48 | 176 |
MS.gene94776.t1 | AT5G43240 | 29.767 | 514 | 295 | 19 | 13 | 474 | 10 | 509 | 2.85e-48 | 176 |
MS.gene94776.t1 | AT5G43240 | 29.767 | 514 | 295 | 19 | 13 | 474 | 10 | 509 | 2.85e-48 | 176 |
MS.gene94776.t1 | AT5G43240 | 29.767 | 514 | 295 | 19 | 13 | 474 | 10 | 509 | 2.85e-48 | 176 |
MS.gene94776.t1 | AT5G01150 | 28.074 | 488 | 295 | 13 | 12 | 457 | 9 | 482 | 4.27e-48 | 175 |
MS.gene94776.t1 | AT3G09110 | 34.154 | 325 | 196 | 8 | 12 | 329 | 9 | 322 | 2.11e-47 | 169 |
MS.gene94776.t1 | AT5G01130 | 29.263 | 475 | 284 | 12 | 1 | 454 | 1 | 444 | 4.09e-44 | 163 |
MS.gene94776.t1 | AT5G37320 | 28.231 | 503 | 291 | 23 | 3 | 457 | 2 | 482 | 8.61e-39 | 149 |
MS.gene94776.t1 | AT3G09120 | 31.132 | 318 | 200 | 9 | 11 | 318 | 5 | 313 | 6.69e-36 | 137 |
MS.gene94776.t1 | AT3G09120 | 25.095 | 263 | 151 | 8 | 261 | 482 | 3 | 260 | 6.49e-11 | 64.3 |
MS.gene94776.t1 | AT5G43240 | 29.226 | 349 | 200 | 12 | 165 | 474 | 25 | 365 | 4.76e-23 | 101 |
Find 91 sgRNAs with CRISPR-Local
Find 172 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TAGAGCACCATTAACGTTTA+TGG | 0.174129 | 7.1:+36148776 | MS.gene94776:CDS |
GATCCTAAATCCCCTATTTC+TGG | 0.194829 | 7.1:+36148744 | MS.gene94776:CDS |
CAAAGTTACCATTGGAGTTT+TGG | 0.220351 | 7.1:+36147558 | MS.gene94776:CDS |
CTAGCATATCCTCCAGAAAT+AGG | 0.222209 | 7.1:-36148756 | None:intergenic |
TGGAATTTGAGTAATGAAAT+TGG | 0.232559 | 7.1:+36147994 | MS.gene94776:CDS |
CCTCCAGAAATAGGGGATTT+AGG | 0.261981 | 7.1:-36148747 | None:intergenic |
AAGAAAAGATACCTCTTTCT+TGG | 0.262602 | 7.1:-36148163 | None:intergenic |
TGATCTTCTCAAATTGTCTT+TGG | 0.284928 | 7.1:+36148278 | MS.gene94776:CDS |
CAATGTTCAGTTTCATATAC+TGG | 0.302296 | 7.1:-36147840 | None:intergenic |
GATACCTTGTAACAATTATA+AGG | 0.309742 | 7.1:+36148695 | MS.gene94776:CDS |
CCGGCTGAGACTGAGTTTCT+TGG | 0.326408 | 7.1:-36147808 | None:intergenic |
AAACTTGTCGTAACAACATT+TGG | 0.329105 | 7.1:-36148069 | None:intergenic |
CTGGATGTGGCTTCTTTAGT+TGG | 0.329390 | 7.1:+36150058 | MS.gene94776:CDS |
CTTGGTGATGTTGATATTAA+CGG | 0.332558 | 7.1:-36148145 | None:intergenic |
AGACTTGCAGAATTGAAAAT+AGG | 0.343871 | 7.1:+36147905 | MS.gene94776:CDS |
ATATCATCACTTTAAATTGT+TGG | 0.353901 | 7.1:-36150310 | None:intergenic |
ACTTAATGATGTGGAGGAAA+TGG | 0.361252 | 7.1:+36148872 | MS.gene94776:CDS |
TCAAAATTTGCTTTGACAAA+CGG | 0.362323 | 7.1:+36149036 | MS.gene94776:CDS |
TAGCATATCCTCCAGAAATA+GGG | 0.363628 | 7.1:-36148755 | None:intergenic |
TCTGTCACCATAAACGTTAA+TGG | 0.367077 | 7.1:-36148783 | None:intergenic |
TTAACCTCCATTCGGTTACT+TGG | 0.371862 | 7.1:-36148363 | None:intergenic |
GAGGAAATGGGCGTTAATAT+TGG | 0.374409 | 7.1:+36148885 | MS.gene94776:CDS |
TACAAGGTATCGGTAATATC+TGG | 0.378376 | 7.1:-36148683 | None:intergenic |
AAATGCTTGGATTAGTTAGT+AGG | 0.380859 | 7.1:-36148638 | None:intergenic |
AACCACCATCAACATAGATT+TGG | 0.380923 | 7.1:-36150229 | None:intergenic |
AACGGCCTCAACCAGTTCAT+TGG | 0.391379 | 7.1:+36149054 | MS.gene94776:CDS |
AAAGGAAGAATCTGATGAAA+TGG | 0.399313 | 7.1:+36148398 | MS.gene94776:CDS |
AACCGAATGGAGGTTAATAT+TGG | 0.408331 | 7.1:+36148369 | MS.gene94776:CDS |
GGCAGGAAGTAGATCTGTTC+AGG | 0.408889 | 7.1:+36149509 | MS.gene94776:intron |
AGCTTCTTAACATTTCGCTT+AGG | 0.418229 | 7.1:+36147646 | MS.gene94776:CDS |
AATATTGAAGCAATGAGCTT+TGG | 0.421569 | 7.1:+36147700 | MS.gene94776:CDS |
ATCAACCAAATCTATGTTGA+TGG | 0.421611 | 7.1:+36150224 | MS.gene94776:CDS |
GCTTCTTAACATTTCGCTTA+GGG | 0.423741 | 7.1:+36147647 | MS.gene94776:CDS |
AAGATATGAAATACCATCAA+TGG | 0.434003 | 7.1:-36148832 | None:intergenic |
TACTATACTAACCAATGAAC+TGG | 0.434085 | 7.1:-36149065 | None:intergenic |
CGGAAATAACGTCACTTACA+AGG | 0.441619 | 7.1:+36150172 | MS.gene94776:CDS |
CTTAATGATGTGGAGGAAAT+GGG | 0.443722 | 7.1:+36148873 | MS.gene94776:CDS |
TCTATTTGCTGAGGCAGATA+AGG | 0.457603 | 7.1:+36147603 | MS.gene94776:CDS |
TACCAATATTAACCTCCATT+CGG | 0.462117 | 7.1:-36148371 | None:intergenic |
CACATTGTGTACCAACAATC+TGG | 0.462685 | 7.1:-36150128 | None:intergenic |
GGTACTGTTCAAGTTTCGTC+AGG | 0.472226 | 7.1:+36147926 | MS.gene94776:CDS |
TTATAATTGTTACAAGGTAT+CGG | 0.485993 | 7.1:-36148693 | None:intergenic |
GGTTAATATTGGTAAAGAAA+AGG | 0.492157 | 7.1:+36148380 | MS.gene94776:CDS |
TCAGACTGCATGGAAATGCT+TGG | 0.498154 | 7.1:-36148651 | None:intergenic |
TTAAATATAAAGTCGGACAT+AGG | 0.501749 | 7.1:-36148312 | None:intergenic |
ACTCCAATGGCATCCATTGA+TGG | 0.503942 | 7.1:+36148819 | MS.gene94776:CDS |
ATTTCCTCCACATCATTAAG+TGG | 0.506600 | 7.1:-36148870 | None:intergenic |
CAAGACCAAGGCCAGATTGT+TGG | 0.515955 | 7.1:+36150117 | MS.gene94776:CDS |
CATCCAGCAGTATCATCATT+AGG | 0.516253 | 7.1:-36150042 | None:intergenic |
GATCTTGTTTATTGAAGCAG+AGG | 0.517035 | 7.1:+36148455 | MS.gene94776:CDS |
CAGCCTAATGATGATACTGC+TGG | 0.517497 | 7.1:+36150039 | MS.gene94776:intron |
CATATACTGGCAATGAGCAC+CGG | 0.517841 | 7.1:-36147827 | None:intergenic |
TTTCTCACCTTTCCCTTGGG+AGG | 0.518315 | 7.1:+36148504 | MS.gene94776:CDS |
CATTGACTTCAAGCTTCTGA+AGG | 0.521092 | 7.1:-36148098 | None:intergenic |
TAACCTCCATTCGGTTACTT+GGG | 0.521189 | 7.1:-36148362 | None:intergenic |
GTGTACCAACAATCTGGCCT+TGG | 0.521461 | 7.1:-36150122 | None:intergenic |
TCTCACAGAGGTAGTAAGAC+TGG | 0.530718 | 7.1:-36147879 | None:intergenic |
CAACTAGACAAAGTTACCAT+TGG | 0.532393 | 7.1:+36147550 | MS.gene94776:CDS |
TATCAACATCACCAAGAAAG+AGG | 0.532453 | 7.1:+36148152 | MS.gene94776:CDS |
ATACCATCAATGGATGCCAT+TGG | 0.558283 | 7.1:-36148822 | None:intergenic |
AATGATGATACTGCTGGATG+TGG | 0.562722 | 7.1:+36150045 | MS.gene94776:CDS |
ACTAACCAATGAACTGGTTG+AGG | 0.567961 | 7.1:-36149059 | None:intergenic |
GTTTATGGTGACAGACGAGT+TGG | 0.571870 | 7.1:+36148791 | MS.gene94776:CDS |
CCAAGAAACTCAGTCTCAGC+CGG | 0.572439 | 7.1:+36147808 | MS.gene94776:CDS |
TAACACTCCTCCCAAGGGAA+AGG | 0.572666 | 7.1:-36148511 | None:intergenic |
AGCATATCCTCCAGAAATAG+GGG | 0.573043 | 7.1:-36148754 | None:intergenic |
CTTGTCCACCAAAACTCCAA+TGG | 0.582683 | 7.1:-36147566 | None:intergenic |
CATATGTAACACTCCTCCCA+AGG | 0.585037 | 7.1:-36148517 | None:intergenic |
TTTAGTCCCAAGTAACCGAA+TGG | 0.590843 | 7.1:+36148356 | MS.gene94776:CDS |
GGGCGTTAATATTGGCCAGA+AGG | 0.601635 | 7.1:+36148893 | MS.gene94776:CDS |
GTTCGTGAGTTCAGACTGCA+TGG | 0.601730 | 7.1:-36148661 | None:intergenic |
AAATAAAGTTCTATTTGCTG+AGG | 0.602370 | 7.1:+36147594 | MS.gene94776:CDS |
AGGGACCATTGCAAAACTTG+TGG | 0.604088 | 7.1:+36147666 | MS.gene94776:CDS |
CGTTAATATTGGCCAGAAGG+AGG | 0.604404 | 7.1:+36148896 | MS.gene94776:CDS |
TGAATGTTGCAAGAAGGATA+CGG | 0.605092 | 7.1:+36150152 | MS.gene94776:CDS |
GAACGTCCCACTTAATGATG+TGG | 0.609331 | 7.1:+36148863 | MS.gene94776:CDS |
CGAGTTGGTTGTGACTCCAA+TGG | 0.611456 | 7.1:+36148806 | MS.gene94776:CDS |
TTTCCTCCACATCATTAAGT+GGG | 0.612058 | 7.1:-36148869 | None:intergenic |
AAGCTTGAAGTCAATGACAT+TGG | 0.612687 | 7.1:+36148105 | MS.gene94776:CDS |
CGTCCCACTTAATGATGTGG+AGG | 0.619494 | 7.1:+36148866 | MS.gene94776:CDS |
AACCAAATCTATGTTGATGG+TGG | 0.623412 | 7.1:+36150227 | MS.gene94776:CDS |
CCTAAATCCCCTATTTCTGG+AGG | 0.628731 | 7.1:+36148747 | MS.gene94776:CDS |
ACAGAGGTAGTAAGACTGGA+AGG | 0.629969 | 7.1:-36147875 | None:intergenic |
GTTGGCAATCAAGCATATTG+TGG | 0.641007 | 7.1:-36150292 | None:intergenic |
AGTCCCAAGTAACCGAATGG+AGG | 0.644205 | 7.1:+36148359 | MS.gene94776:CDS |
ATATGTAACACTCCTCCCAA+GGG | 0.664294 | 7.1:-36148516 | None:intergenic |
ATGTGTTGAATGTTGCAAGA+AGG | 0.665559 | 7.1:+36150146 | MS.gene94776:CDS |
AAAGTTGAAGGTCAAGACCA+AGG | 0.676584 | 7.1:+36150105 | MS.gene94776:CDS |
GGAGTGTTACATATGCTCGA+AGG | 0.683354 | 7.1:+36148525 | MS.gene94776:CDS |
TGCAAGTCTCGTTCTCACAG+AGG | 0.684241 | 7.1:-36147891 | None:intergenic |
TCTATGGTCACAGACATGCA+AGG | 0.703516 | 7.1:+36147771 | MS.gene94776:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | TTTTGTTATAATTATTATGT+AGG | - | chr7.1:36149112-36149131 | None:intergenic | 10.0% |
!! | AATTATAACAAAAACGATAT+TGG | + | chr7.1:36149119-36149138 | MS.gene94776:intron | 15.0% |
!! | AAAAAATCAACAAAAGTTGA+AGG | + | chr7.1:36150093-36150112 | MS.gene94776:CDS | 20.0% |
!! | AAACAAGTTATTAGTTAGAA+TGG | - | chr7.1:36150005-36150024 | None:intergenic | 20.0% |
!! | AACAAGTTATTAGTTAGAAT+GGG | - | chr7.1:36150004-36150023 | None:intergenic | 20.0% |
!! | AATACATGAATTTGGTAAAA+AGG | - | chr7.1:36149757-36149776 | None:intergenic | 20.0% |
!! | ATCTTGATGAAAAATATCTA+TGG | + | chr7.1:36147755-36147774 | MS.gene94776:CDS | 20.0% |
!! | TAACGATAATTATATAACTG+AGG | - | chr7.1:36149801-36149820 | None:intergenic | 20.0% |
!! | TATAATTATTATGTAGGATG+AGG | - | chr7.1:36149106-36149125 | None:intergenic | 20.0% |
!! | TTATAATTGTTACAAGGTAT+CGG | - | chr7.1:36148696-36148715 | None:intergenic | 20.0% |
!!! | ATTTTTGTGTTTGAAATATG+TGG | + | chr7.1:36149607-36149626 | MS.gene94776:intron | 20.0% |
!!! | GTGCTTTTTAAATATAAAGT+CGG | - | chr7.1:36148322-36148341 | None:intergenic | 20.0% |
!!! | TAATGAAATTGGTTTTGTTA+AGG | + | chr7.1:36148005-36148024 | MS.gene94776:CDS | 20.0% |
!!! | TTTTCCTTATAATTGTTACA+AGG | - | chr7.1:36148702-36148721 | None:intergenic | 20.0% |
! | AAGATATGAAATACCATCAA+TGG | - | chr7.1:36148835-36148854 | None:intergenic | 25.0% |
! | AGGAATCAAAAATGTATTTG+TGG | + | chr7.1:36147946-36147965 | MS.gene94776:CDS | 25.0% |
! | GATACCTTGTAACAATTATA+AGG | + | chr7.1:36148695-36148714 | MS.gene94776:CDS | 25.0% |
! | GGTTAATATTGGTAAAGAAA+AGG | + | chr7.1:36148380-36148399 | MS.gene94776:CDS | 25.0% |
! | GTGAGAAAAATACATGAATT+TGG | - | chr7.1:36149765-36149784 | None:intergenic | 25.0% |
! | TAGAAAAAGAAGAGAAGTAA+AGG | + | chr7.1:36149388-36149407 | MS.gene94776:intron | 25.0% |
! | TGAACATGCACATATAATAA+AGG | - | chr7.1:36149488-36149507 | None:intergenic | 25.0% |
! | TGGAATTTGAGTAATGAAAT+TGG | + | chr7.1:36147994-36148013 | MS.gene94776:CDS | 25.0% |
! | TTAAATATAAAGTCGGACAT+AGG | - | chr7.1:36148315-36148334 | None:intergenic | 25.0% |
! | TTATTATATGTGCATGTTCA+TGG | + | chr7.1:36149488-36149507 | MS.gene94776:intron | 25.0% |
!! | AAATAAAGTTCTATTTGCTG+AGG | + | chr7.1:36147594-36147613 | MS.gene94776:CDS | 25.0% |
!! | TCAAAATTTGCTTTGACAAA+CGG | + | chr7.1:36149036-36149055 | MS.gene94776:CDS | 25.0% |
!! | TTTTTCATTGCTCTTAATCT+TGG | - | chr7.1:36150205-36150224 | None:intergenic | 25.0% |
AAACTTGTCGTAACAACATT+TGG | - | chr7.1:36148072-36148091 | None:intergenic | 30.0% | |
AAAGGAAGAATCTGATGAAA+TGG | + | chr7.1:36148398-36148417 | MS.gene94776:CDS | 30.0% | |
AAGAAAAGATACCTCTTTCT+TGG | - | chr7.1:36148166-36148185 | None:intergenic | 30.0% | |
AATATTGAAGCAATGAGCTT+TGG | + | chr7.1:36147700-36147719 | MS.gene94776:CDS | 30.0% | |
AATGAATGGTACCCATATAT+GGG | + | chr7.1:36149289-36149308 | MS.gene94776:intron | 30.0% | |
AGACTTGCAGAATTGAAAAT+AGG | + | chr7.1:36147905-36147924 | MS.gene94776:CDS | 30.0% | |
ATATGAACATCCCCATATAT+GGG | - | chr7.1:36149303-36149322 | None:intergenic | 30.0% | |
ATCAACCAAATCTATGTTGA+TGG | + | chr7.1:36150224-36150243 | MS.gene94776:CDS | 30.0% | |
ATGGAAGTTTAATAGAACCA+TGG | - | chr7.1:36149971-36149990 | None:intergenic | 30.0% | |
CAAACACAAAAATAGAAGCA+TGG | - | chr7.1:36149600-36149619 | None:intergenic | 30.0% | |
CAACCACAAGAAATCAAATA+TGG | - | chr7.1:36148983-36149002 | None:intergenic | 30.0% | |
CAATGTTCAGTTTCATATAC+TGG | - | chr7.1:36147843-36147862 | None:intergenic | 30.0% | |
CGATAATTATATAACTGAGG+TGG | - | chr7.1:36149798-36149817 | None:intergenic | 30.0% | |
CTCACTAATTCTTCAATATG+TGG | + | chr7.1:36148241-36148260 | MS.gene94776:intron | 30.0% | |
CTTCAATATGTGGTTTGAAT+AGG | + | chr7.1:36148251-36148270 | MS.gene94776:intron | 30.0% | |
TACCAATATTAACCTCCATT+CGG | - | chr7.1:36148374-36148393 | None:intergenic | 30.0% | |
TACTATACTAACCAATGAAC+TGG | - | chr7.1:36149068-36149087 | None:intergenic | 30.0% | |
TACTTCTTGAGAAAGACTAA+GGG | + | chr7.1:36149683-36149702 | MS.gene94776:intron | 30.0% | |
TAGTACTACACATAACAAGT+CGG | - | chr7.1:36149252-36149271 | None:intergenic | 30.0% | |
TGATCTTCTCAAATTGTCTT+TGG | + | chr7.1:36148278-36148297 | MS.gene94776:CDS | 30.0% | |
TGTTGAACAGAGAAAAATTC+TGG | + | chr7.1:36147974-36147993 | MS.gene94776:CDS | 30.0% | |
TTACTTCTTGAGAAAGACTA+AGG | + | chr7.1:36149682-36149701 | MS.gene94776:intron | 30.0% | |
TTAGTAAGACATGACAATAG+AGG | - | chr7.1:36149718-36149737 | None:intergenic | 30.0% | |
! | GGACTAAATTTTCAACAGAT+TGG | - | chr7.1:36148344-36148363 | None:intergenic | 30.0% |
! | GTTTGTCAAAGCAAATTTTG+AGG | - | chr7.1:36149037-36149056 | None:intergenic | 30.0% |
! | TCACCATATTTGATTTCTTG+TGG | + | chr7.1:36148977-36148996 | MS.gene94776:intron | 30.0% |
! | TGTGTAGTACTAATTTTCCA+TGG | + | chr7.1:36149260-36149279 | MS.gene94776:intron | 30.0% |
! | TTCTACCTTTTGCTTCTTTA+GGG | - | chr7.1:36149559-36149578 | None:intergenic | 30.0% |
! | TTTCTACCTTTTGCTTCTTT+AGG | - | chr7.1:36149560-36149579 | None:intergenic | 30.0% |
! | TTTTGTCAAGTGCTTTTCTA+TGG | - | chr7.1:36149855-36149874 | None:intergenic | 30.0% |
!! | AAATGCTTGGATTAGTTAGT+AGG | - | chr7.1:36148641-36148660 | None:intergenic | 30.0% |
!! | CTTGGTGATGTTGATATTAA+CGG | - | chr7.1:36148148-36148167 | None:intergenic | 30.0% |
!!! | GTTGATTTTTTGTTGTCTGA+AGG | - | chr7.1:36150084-36150103 | None:intergenic | 30.0% |
AACCACCATCAACATAGATT+TGG | - | chr7.1:36150232-36150251 | None:intergenic | 35.0% | |
AACCGAATGGAGGTTAATAT+TGG | + | chr7.1:36148369-36148388 | MS.gene94776:CDS | 35.0% | |
AAGCTTGAAGTCAATGACAT+TGG | + | chr7.1:36148105-36148124 | MS.gene94776:CDS | 35.0% | |
ACTTAATGATGTGGAGGAAA+TGG | + | chr7.1:36148872-36148891 | MS.gene94776:CDS | 35.0% | |
ACTTCTTGAGAAAGACTAAG+GGG | + | chr7.1:36149684-36149703 | MS.gene94776:intron | 35.0% | |
AGCTTCTTAACATTTCGCTT+AGG | + | chr7.1:36147646-36147665 | MS.gene94776:CDS | 35.0% | |
AGGAAGAAAGATTGAACGAA+AGG | + | chr7.1:36149408-36149427 | MS.gene94776:intron | 35.0% | |
ATGAATGGTACCCATATATG+GGG | + | chr7.1:36149290-36149309 | MS.gene94776:intron | 35.0% | |
ATGTGTTGAATGTTGCAAGA+AGG | + | chr7.1:36150146-36150165 | MS.gene94776:CDS | 35.0% | |
ATTTCCTCCACATCATTAAG+TGG | - | chr7.1:36148873-36148892 | None:intergenic | 35.0% | |
CAACTAGACAAAGTTACCAT+TGG | + | chr7.1:36147550-36147569 | MS.gene94776:CDS | 35.0% | |
CAATGAATGGTACCCATATA+TGG | + | chr7.1:36149288-36149307 | MS.gene94776:intron | 35.0% | |
CATATGAACATCCCCATATA+TGG | - | chr7.1:36149304-36149323 | None:intergenic | 35.0% | |
CATATGATCTTAGGGTAATG+AGG | + | chr7.1:36149318-36149337 | MS.gene94776:intron | 35.0% | |
CTTAATGATGTGGAGGAAAT+GGG | + | chr7.1:36148873-36148892 | MS.gene94776:CDS | 35.0% | |
GCTTCTTAACATTTCGCTTA+GGG | + | chr7.1:36147647-36147666 | MS.gene94776:CDS | 35.0% | |
GGGATGTTCATATGATCTTA+GGG | + | chr7.1:36149310-36149329 | MS.gene94776:intron | 35.0% | |
GTAACAAGTGATTCAACATC+TGG | - | chr7.1:36149923-36149942 | None:intergenic | 35.0% | |
TACCATTCATTGCATTTCCA+TGG | - | chr7.1:36149280-36149299 | None:intergenic | 35.0% | |
TAGCATATCCTCCAGAAATA+GGG | - | chr7.1:36148758-36148777 | None:intergenic | 35.0% | |
TAGTTAGAATGGGAGAATGA+GGG | - | chr7.1:36149994-36150013 | None:intergenic | 35.0% | |
TATCAACATCACCAAGAAAG+AGG | + | chr7.1:36148152-36148171 | MS.gene94776:CDS | 35.0% | |
TCTGTCACCATAAACGTTAA+TGG | - | chr7.1:36148786-36148805 | None:intergenic | 35.0% | |
TGAATGTTGCAAGAAGGATA+CGG | + | chr7.1:36150152-36150171 | MS.gene94776:CDS | 35.0% | |
TGAGCTCAGAAAAATGCTTA+AGG | + | chr7.1:36148598-36148617 | MS.gene94776:CDS | 35.0% | |
TGATTCAACATCTGGTAGAA+CGG | - | chr7.1:36149915-36149934 | None:intergenic | 35.0% | |
TTAGTTAGAATGGGAGAATG+AGG | - | chr7.1:36149995-36150014 | None:intergenic | 35.0% | |
TTCCATGGAAATGCAATGAA+TGG | + | chr7.1:36149275-36149294 | MS.gene94776:intron | 35.0% | |
TTTCCTCCACATCATTAAGT+GGG | - | chr7.1:36148872-36148891 | None:intergenic | 35.0% | |
! | AACCAAATCTATGTTGATGG+TGG | + | chr7.1:36150227-36150246 | MS.gene94776:CDS | 35.0% |
! | ATCACTTGTTACTGAATGAG+AGG | + | chr7.1:36149931-36149950 | MS.gene94776:intron | 35.0% |
! | ATTAGCCACAAGTTTTGCAA+TGG | - | chr7.1:36147674-36147693 | None:intergenic | 35.0% |
! | ATTTGATTTCTTGTGGTTGC+AGG | + | chr7.1:36148984-36149003 | MS.gene94776:intron | 35.0% |
! | CAAAGTTACCATTGGAGTTT+TGG | + | chr7.1:36147558-36147577 | MS.gene94776:CDS | 35.0% |
! | GATCTTGTTTATTGAAGCAG+AGG | + | chr7.1:36148455-36148474 | MS.gene94776:CDS | 35.0% |
! | TAGAGCACCATTAACGTTTA+TGG | + | chr7.1:36148776-36148795 | MS.gene94776:CDS | 35.0% |
! | TCAAGTGCTTTTCTATGGAT+CGG | - | chr7.1:36149850-36149869 | None:intergenic | 35.0% |
! | TCACTTGTTACTGAATGAGA+GGG | + | chr7.1:36149932-36149951 | MS.gene94776:intron | 35.0% |
! | TCTACCTTTTGCTTCTTTAG+GGG | - | chr7.1:36149558-36149577 | None:intergenic | 35.0% |
! | TTTGATTTCTTGTGGTTGCA+GGG | + | chr7.1:36148985-36149004 | MS.gene94776:intron | 35.0% |
!! | TACAAGGTATCGGTAATATC+TGG | - | chr7.1:36148686-36148705 | None:intergenic | 35.0% |
!! | TTTGTCTAGTTGTTTTGCTG+AGG | - | chr7.1:36147542-36147561 | None:intergenic | 35.0% |
!!! | ATGTAGGATGAGGTTTTGTT+TGG | - | chr7.1:36149096-36149115 | None:intergenic | 35.0% |
AAAGTTGAAGGTCAAGACCA+AGG | + | chr7.1:36150105-36150124 | MS.gene94776:CDS | 40.0% | |
AATGATGATACTGCTGGATG+TGG | + | chr7.1:36150045-36150064 | MS.gene94776:CDS | 40.0% | |
ACTAACCAATGAACTGGTTG+AGG | - | chr7.1:36149062-36149081 | None:intergenic | 40.0% | |
AGCATATCCTCCAGAAATAG+GGG | - | chr7.1:36148757-36148776 | None:intergenic | 40.0% | |
ATACCATCAATGGATGCCAT+TGG | - | chr7.1:36148825-36148844 | None:intergenic | 40.0% | |
ATATGTAACACTCCTCCCAA+GGG | - | chr7.1:36148519-36148538 | None:intergenic | 40.0% | |
ATCATCATTAGGCTGAACAC+AGG | - | chr7.1:36150034-36150053 | None:intergenic | 40.0% | |
CACATTGTGTACCAACAATC+TGG | - | chr7.1:36150131-36150150 | None:intergenic | 40.0% | |
CATCCAGCAGTATCATCATT+AGG | - | chr7.1:36150045-36150064 | None:intergenic | 40.0% | |
CGGAAATAACGTCACTTACA+AGG | + | chr7.1:36150172-36150191 | MS.gene94776:CDS | 40.0% | |
CTAGCATATCCTCCAGAAAT+AGG | - | chr7.1:36148759-36148778 | None:intergenic | 40.0% | |
GAGGAAATGGGCGTTAATAT+TGG | + | chr7.1:36148885-36148904 | MS.gene94776:CDS | 40.0% | |
GATCCTAAATCCCCTATTTC+TGG | + | chr7.1:36148744-36148763 | MS.gene94776:CDS | 40.0% | |
GGGGATGTTCATATGATCTT+AGG | + | chr7.1:36149309-36149328 | MS.gene94776:intron | 40.0% | |
GTAACCACCTCTTATGTGTT+CGG | + | chr7.1:36149220-36149239 | MS.gene94776:intron | 40.0% | |
GTTACTACCGAACACATAAG+AGG | - | chr7.1:36149230-36149249 | None:intergenic | 40.0% | |
GTTGGCAATCAAGCATATTG+TGG | - | chr7.1:36150295-36150314 | None:intergenic | 40.0% | |
TAACCTCCATTCGGTTACTT+GGG | - | chr7.1:36148365-36148384 | None:intergenic | 40.0% | |
TATATGTGCATGTTCATGGC+AGG | + | chr7.1:36149492-36149511 | MS.gene94776:intron | 40.0% | |
TTAACCTCCATTCGGTTACT+TGG | - | chr7.1:36148366-36148385 | None:intergenic | 40.0% | |
TTTAGTCCCAAGTAACCGAA+TGG | + | chr7.1:36148356-36148375 | MS.gene94776:CDS | 40.0% | |
! | AGTTTTCTCACCTTTCCCTT+GGG | + | chr7.1:36148501-36148520 | MS.gene94776:CDS | 40.0% |
! | CTACCTTTTGCTTCTTTAGG+GGG | - | chr7.1:36149557-36149576 | None:intergenic | 40.0% |
! | TAGTTTTCTCACCTTTCCCT+TGG | + | chr7.1:36148500-36148519 | MS.gene94776:CDS | 40.0% |
! | TCTATTTGCTGAGGCAGATA+AGG | + | chr7.1:36147603-36147622 | MS.gene94776:CDS | 40.0% |
!! | AGTTACCATTGGAGTTTTGG+TGG | + | chr7.1:36147561-36147580 | MS.gene94776:CDS | 40.0% |
!! | CATTGACTTCAAGCTTCTGA+AGG | - | chr7.1:36148101-36148120 | None:intergenic | 40.0% |
ACAGAGGTAGTAAGACTGGA+AGG | - | chr7.1:36147878-36147897 | None:intergenic | 45.0% | |
ACTACCGAACACATAAGAGG+TGG | - | chr7.1:36149227-36149246 | None:intergenic | 45.0% | |
ACTCCAATGGCATCCATTGA+TGG | + | chr7.1:36148819-36148838 | MS.gene94776:CDS | 45.0% | |
ACTGAATGAGAGGGAAGTCA+TGG | + | chr7.1:36149941-36149960 | MS.gene94776:intron | 45.0% | |
AGGGACCATTGCAAAACTTG+TGG | + | chr7.1:36147666-36147685 | MS.gene94776:CDS | 45.0% | |
ATTGGCCAGAAGGAGGTAAA+AGG | + | chr7.1:36148903-36148922 | MS.gene94776:intron | 45.0% | |
CAGCCTAATGATGATACTGC+TGG | + | chr7.1:36150039-36150058 | MS.gene94776:intron | 45.0% | |
CATATACTGGCAATGAGCAC+CGG | - | chr7.1:36147830-36147849 | None:intergenic | 45.0% | |
CATATGTAACACTCCTCCCA+AGG | - | chr7.1:36148520-36148539 | None:intergenic | 45.0% | |
CCTCCAGAAATAGGGGATTT+AGG | - | chr7.1:36148750-36148769 | None:intergenic | 45.0% | |
CGTTAATATTGGCCAGAAGG+AGG | + | chr7.1:36148896-36148915 | MS.gene94776:CDS | 45.0% | |
CTGAATGAGAGGGAAGTCAT+GGG | + | chr7.1:36149942-36149961 | MS.gene94776:intron | 45.0% | |
CTGGATGTGGCTTCTTTAGT+TGG | + | chr7.1:36150058-36150077 | MS.gene94776:CDS | 45.0% | |
CTTGTCCACCAAAACTCCAA+TGG | - | chr7.1:36147569-36147588 | None:intergenic | 45.0% | |
GAACGTCCCACTTAATGATG+TGG | + | chr7.1:36148863-36148882 | MS.gene94776:CDS | 45.0% | |
GTTTATGGTGACAGACGAGT+TGG | + | chr7.1:36148791-36148810 | MS.gene94776:CDS | 45.0% | |
TAGAATGGGAGAATGAGGGA+TGG | - | chr7.1:36149990-36150009 | None:intergenic | 45.0% | |
TAGCCCCCTAAAGAAGCAAA+AGG | + | chr7.1:36149551-36149570 | MS.gene94776:CDS | 45.0% | |
TCAGACTGCATGGAAATGCT+TGG | - | chr7.1:36148654-36148673 | None:intergenic | 45.0% | |
TCTATGGTCACAGACATGCA+AGG | + | chr7.1:36147771-36147790 | MS.gene94776:CDS | 45.0% | |
TCTCACAGAGGTAGTAAGAC+TGG | - | chr7.1:36147882-36147901 | None:intergenic | 45.0% | |
TTGGCCAGAAGGAGGTAAAA+GGG | + | chr7.1:36148904-36148923 | MS.gene94776:intron | 45.0% | |
! | AGATTGAACGAAAGGTGCGA+AGG | + | chr7.1:36149416-36149435 | MS.gene94776:intron | 45.0% |
! | GGAGTGTTACATATGCTCGA+AGG | + | chr7.1:36148525-36148544 | MS.gene94776:CDS | 45.0% |
! | GGTACTGTTCAAGTTTCGTC+AGG | + | chr7.1:36147926-36147945 | MS.gene94776:CDS | 45.0% |
!! | CCTAAATCCCCTATTTCTGG+AGG | + | chr7.1:36148747-36148766 | MS.gene94776:CDS | 45.0% |
AACGGCCTCAACCAGTTCAT+TGG | + | chr7.1:36149054-36149073 | MS.gene94776:CDS | 50.0% | |
AGTCCCAAGTAACCGAATGG+AGG | + | chr7.1:36148359-36148378 | MS.gene94776:CDS | 50.0% | |
CAAGACCAAGGCCAGATTGT+TGG | + | chr7.1:36150117-36150136 | MS.gene94776:CDS | 50.0% | |
CCAAGAAACTCAGTCTCAGC+CGG | + | chr7.1:36147808-36147827 | MS.gene94776:CDS | 50.0% | |
CGTCCCACTTAATGATGTGG+AGG | + | chr7.1:36148866-36148885 | MS.gene94776:CDS | 50.0% | |
GGCAGGAAGTAGATCTGTTC+AGG | + | chr7.1:36149509-36149528 | MS.gene94776:intron | 50.0% | |
GGGCGTTAATATTGGCCAGA+AGG | + | chr7.1:36148893-36148912 | MS.gene94776:CDS | 50.0% | |
GTGTACCAACAATCTGGCCT+TGG | - | chr7.1:36150125-36150144 | None:intergenic | 50.0% | |
GTTCGTGAGTTCAGACTGCA+TGG | - | chr7.1:36148664-36148683 | None:intergenic | 50.0% | |
TAACACTCCTCCCAAGGGAA+AGG | - | chr7.1:36148514-36148533 | None:intergenic | 50.0% | |
TGCAAGTCTCGTTCTCACAG+AGG | - | chr7.1:36147894-36147913 | None:intergenic | 50.0% | |
TTTCTCACCTTTCCCTTGGG+AGG | + | chr7.1:36148504-36148523 | MS.gene94776:CDS | 50.0% | |
! | CAGTCCCTTTTACCTCCTTC+TGG | - | chr7.1:36148911-36148930 | None:intergenic | 50.0% |
!! | CGAGTTGGTTGTGACTCCAA+TGG | + | chr7.1:36148806-36148825 | MS.gene94776:CDS | 50.0% |
AGGGAAGTCATGGGTGACCA+TGG | + | chr7.1:36149951-36149970 | MS.gene94776:intron | 55.0% | |
CCGGCTGAGACTGAGTTTCT+TGG | - | chr7.1:36147811-36147830 | None:intergenic | 55.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr7.1 | gene | 36147526 | 36150326 | 36147526 | ID=MS.gene94776 |
chr7.1 | mRNA | 36147526 | 36150326 | 36147526 | ID=MS.gene94776.t1;Parent=MS.gene94776 |
chr7.1 | exon | 36147526 | 36148173 | 36147526 | ID=MS.gene94776.t1.exon1;Parent=MS.gene94776.t1 |
chr7.1 | CDS | 36147526 | 36148173 | 36147526 | ID=cds.MS.gene94776.t1;Parent=MS.gene94776.t1 |
chr7.1 | exon | 36148273 | 36148917 | 36148273 | ID=MS.gene94776.t1.exon2;Parent=MS.gene94776.t1 |
chr7.1 | CDS | 36148273 | 36148917 | 36148273 | ID=cds.MS.gene94776.t1;Parent=MS.gene94776.t1 |
chr7.1 | exon | 36149006 | 36149075 | 36149006 | ID=MS.gene94776.t1.exon3;Parent=MS.gene94776.t1 |
chr7.1 | CDS | 36149006 | 36149075 | 36149006 | ID=cds.MS.gene94776.t1;Parent=MS.gene94776.t1 |
chr7.1 | exon | 36149514 | 36149572 | 36149514 | ID=MS.gene94776.t1.exon4;Parent=MS.gene94776.t1 |
chr7.1 | CDS | 36149514 | 36149572 | 36149514 | ID=cds.MS.gene94776.t1;Parent=MS.gene94776.t1 |
chr7.1 | exon | 36150042 | 36150326 | 36150042 | ID=MS.gene94776.t1.exon5;Parent=MS.gene94776.t1 |
chr7.1 | CDS | 36150042 | 36150326 | 36150042 | ID=cds.MS.gene94776.t1;Parent=MS.gene94776.t1 |
Gene Sequence |
Protein sequence |