AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene057534

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene057534.t1 MTR_7g012680 75.093 269 17 2 1 239 1 249 9.10e-136 394
MS.gene057534.t1 MTR_7g012680 74.820 139 13 1 240 356 314 452 2.23e-56 190
MS.gene057534.t1 MTR_7g066570 67.037 270 51 3 1 239 1 263 2.22e-118 354
MS.gene057534.t1 MTR_7g066570 54.706 170 34 1 228 354 316 485 1.74e-42 155
MS.gene057534.t1 MTR_1g014060 53.890 347 131 4 34 356 50 391 1.24e-117 346
MS.gene057534.t1 MTR_7g066340 44.323 458 147 11 5 355 3 459 6.83e-95 291
MS.gene057534.t1 MTR_7g058710 55.469 256 90 4 6 238 4 258 6.12e-85 265
MS.gene057534.t1 MTR_7g058710 37.500 160 56 1 241 356 325 484 4.89e-22 97.4
MS.gene057534.t1 MTR_7g066290 41.149 435 168 9 1 349 1 433 4.17e-81 254
MS.gene057534.t1 MTR_7g066260 49.638 276 96 6 6 247 7 273 3.77e-79 251
MS.gene057534.t1 MTR_7g066260 53.125 128 47 2 241 355 341 468 7.15e-26 108
MS.gene057534.t1 MTR_7g066350 53.788 264 85 7 10 238 5 266 2.77e-77 245
MS.gene057534.t1 MTR_7g066350 48.739 119 51 2 236 345 328 445 5.03e-17 82.4
MS.gene057534.t1 MTR_7g066360 40.044 457 168 11 1 354 1 454 3.85e-74 237
MS.gene057534.t1 MTR_2g029400 35.824 455 126 7 1 339 1 405 2.82e-71 228
MS.gene057534.t1 MTR_7g066400 50.958 261 85 9 3 239 5 246 3.63e-68 221
MS.gene057534.t1 MTR_7g066400 47.154 123 46 2 241 345 312 433 8.93e-23 99.4
MS.gene057534.t1 MTR_7g066310 38.298 423 146 11 11 355 4 389 9.71e-68 219
MS.gene057534.t1 MTR_7g058700 40.260 385 143 9 34 356 569 928 1.28e-67 229
MS.gene057534.t1 MTR_7g066580 34.576 483 133 12 20 355 1 447 1.44e-65 214
MS.gene057534.t1 MTR_1g041315 47.101 276 98 6 1 231 1 273 6.67e-65 214
MS.gene057534.t1 MTR_1g041315 46.078 102 46 1 241 333 350 451 8.06e-16 79.0
MS.gene057534.t1 MTR_3g065200 32.374 417 181 9 12 336 1 408 1.25e-51 178
MS.gene057534.t1 MTR_7g066480 33.173 416 192 9 14 351 16 423 6.23e-50 173
MS.gene057534.t1 MTR_7g066430 37.692 260 126 7 14 238 4 262 2.00e-48 170
MS.gene057534.t1 MTR_7g066430 36.994 173 60 3 231 355 319 490 1.85e-18 86.7
MS.gene057534.t1 MTR_7g066410 39.837 246 94 6 15 207 11 255 5.52e-48 169
MS.gene057534.t1 MTR_7g066410 55.714 70 31 0 280 349 443 512 2.31e-13 71.2
MS.gene057534.t1 MTR_7g063900 38.428 229 106 5 14 210 10 235 8.65e-40 147
MS.gene057534.t1 MTR_7g063880 39.370 254 106 10 1 220 1 240 1.38e-38 143
MS.gene057534.t1 MTR_7g063880 48.649 74 38 0 280 353 393 466 9.58e-13 69.3
MS.gene057534.t1 MTR_7g063890 36.585 246 114 6 2 210 11 251 4.92e-38 142
MS.gene057534.t1 MTR_7g063840 34.496 258 117 10 5 220 3 250 2.41e-35 134
MS.gene057534.t1 MTR_7g063840 50.000 72 36 0 285 356 403 474 1.17e-12 69.3
MS.gene057534.t1 MTR_7g063660 36.404 228 102 6 14 206 9 228 8.34e-35 133
MS.gene057534.t1 MTR_7g063660 44.156 77 43 0 280 356 402 478 5.80e-13 70.1
MS.gene057534.t1 MTR_7g062280 33.708 267 121 9 6 220 4 266 1.09e-33 130
MS.gene057534.t1 MTR_7g062280 53.247 77 36 0 280 356 416 492 2.06e-15 77.8
MS.gene057534.t1 MTR_4g017610 28.372 430 193 13 17 341 52 471 1.96e-33 129
MS.gene057534.t1 MTR_7g062300 33.473 239 122 6 1 206 1 235 4.34e-33 128
MS.gene057534.t1 MTR_7g062300 55.224 67 29 1 280 345 403 469 1.25e-12 68.9
MS.gene057534.t1 MTR_7g063820 38.261 230 97 10 15 206 11 233 1.39e-30 121
MS.gene057534.t1 MTR_7g063820 52.564 78 36 1 280 356 408 485 7.87e-11 63.5
MS.gene057534.t1 MTR_4g017410 33.103 290 121 11 8 238 3 278 5.18e-30 120
MS.gene057534.t1 MTR_7g066280 52.381 126 54 5 63 184 1 124 8.20e-30 118
MS.gene057534.t1 MTR_7g066280 42.953 149 71 3 217 355 252 396 7.79e-21 93.2
MS.gene057534.t1 MTR_7g063920 33.333 237 86 5 1 206 1 196 5.95e-29 116
MS.gene057534.t1 MTR_7g063920 53.247 77 36 0 280 356 361 437 6.03e-16 79.0
MS.gene057534.t1 MTR_4g019310 35.366 246 109 9 11 209 5 247 7.73e-29 117
MS.gene057534.t1 MTR_7g063830 33.184 223 112 6 15 204 11 229 9.38e-29 116
MS.gene057534.t1 MTR_4g019340 33.065 248 99 7 15 205 39 276 3.26e-28 115
MS.gene057534.t1 MTR_4g017830 33.333 258 110 10 1 208 1 246 9.54e-27 111
MS.gene057534.t1 MTR_3g007740 35.808 229 91 8 14 206 9 217 1.13e-26 110
MS.gene057534.t1 MTR_3g007740 47.887 71 36 1 280 349 372 442 4.17e-11 64.3
MS.gene057534.t1 MTR_4g017440 31.783 258 111 8 1 205 1 246 3.45e-25 106
MS.gene057534.t1 MTR_4g017550 34.343 198 109 7 17 204 30 216 3.18e-23 100
MS.gene057534.t1 MTR_7g066490 34.348 230 102 6 14 212 16 227 3.67e-23 100
MS.gene057534.t1 MTR_7g066490 59.722 72 29 0 280 351 338 409 5.58e-17 82.0
MS.gene057534.t1 MTR_8g445860 31.004 229 118 6 14 206 13 237 3.62e-22 94.0
MS.gene057534.t1 MTR_7g062270 32.796 186 84 7 1 153 1 178 4.75e-22 96.7
MS.gene057534.t1 MTR_7g063670 32.083 240 111 9 1 204 4 227 1.26e-20 93.2
MS.gene057534.t1 MTR_7g063670 48.718 78 39 1 280 356 381 458 3.44e-14 73.9
MS.gene057534.t1 MTR_0150s0010 29.752 242 121 6 8 207 4 238 5.97e-20 88.2
MS.gene057534.t1 MTR_4g017470 29.167 240 89 4 7 204 5 205 6.93e-20 90.9
MS.gene057534.t1 MTR_1g115440 29.694 229 126 4 14 207 11 239 2.13e-18 83.6
MS.gene057534.t1 MTR_7g066390 56.579 76 33 0 280 355 53 128 2.61e-17 78.6
MS.gene057534.t1 MTR_2g067310 38.806 134 42 3 34 167 97 190 5.88e-16 77.0
MS.gene057534.t1 MTR_7g063690 32.524 206 103 7 1 205 1 171 4.29e-14 71.6
MS.gene057534.t1 MTR_7g063720 35.971 139 64 2 242 356 96 233 4.41e-14 71.6
MS.gene057534.t1 MTR_7g063760 45.205 73 39 1 285 356 2 74 8.39e-14 66.2
MS.gene057534.t1 MTR_7g063850 46.835 79 42 0 277 355 210 288 2.56e-13 70.1
MS.gene057534.t1 MTR_1g115455 27.642 246 103 8 14 206 9 232 2.77e-12 66.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene057534.t1 AT3G09110 32.895 228 115 5 14 207 9 232 5.34e-29 115
MS.gene057534.t1 AT3G09120 28.618 304 171 7 14 278 6 302 5.93e-26 106
MS.gene057534.t1 AT5G01140 33.649 211 115 6 14 205 9 213 4.55e-24 103
MS.gene057534.t1 AT5G01130 31.466 232 112 5 14 209 9 229 2.19e-20 92.4
MS.gene057534.t1 AT5G01120 28.261 230 126 6 15 206 10 238 3.88e-20 92.0
MS.gene057534.t1 AT5G01150 30.901 233 114 5 14 206 9 234 5.96e-20 91.3
MS.gene057534.t1 AT5G43240 27.897 233 126 7 15 206 10 241 3.02e-17 83.2
MS.gene057534.t1 AT5G43240 27.897 233 126 7 15 206 10 241 3.02e-17 83.2
MS.gene057534.t1 AT5G43240 27.897 233 126 7 15 206 10 241 3.02e-17 83.2
MS.gene057534.t1 AT3G09140 27.642 246 120 6 14 206 9 249 2.07e-16 80.9
MS.gene057534.t1 AT3G09140 26.549 226 108 6 14 186 9 229 9.19e-14 72.8
MS.gene057534.t1 AT5G37320 28.261 184 112 6 35 201 61 241 9.86e-12 66.2

Find 46 sgRNAs with CRISPR-Local

Find 90 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GAAGAAAGATTTATCAAAAT+TGG 0.198167 7.2:+85132139 MS.gene057534:CDS
CTATATTCAGTTTGAGCTTC+TGG 0.233458 7.2:-85131050 None:intergenic
TCAACATCTGCTTTGCAATA+TGG 0.234722 7.2:+85132291 MS.gene057534:CDS
TAATCTTCCATCGAGTTTCT+AGG 0.245861 7.2:-85131024 None:intergenic
AAAAGTTCCTCTATCTGATT+TGG 0.272432 7.2:+85132117 MS.gene057534:CDS
ATTGAGCAGCATTTCTTTGC+AGG 0.322996 7.2:-85131001 None:intergenic
TAAGTATGACAATACTTTAT+AGG 0.329214 7.2:-85131892 None:intergenic
GTTCTTCTTTAAAATAAAAC+TGG 0.335816 7.2:-85131494 None:intergenic
CAAAGCAGCCTTTGAGGTTA+AGG 0.345875 7.2:-85131470 None:intergenic
GAAACTCTAAATTGTTTCTT+CGG 0.367433 7.2:-85131537 None:intergenic
TTGTCATTTCTCCACCTTAA+CGG 0.368739 7.2:-85132334 None:intergenic
AACAATTTAGAGTTTCTGAT+TGG 0.374987 7.2:+85131544 MS.gene057534:CDS
AATATTGAAGCAGTGAGATT+TGG 0.383738 7.2:+85130916 MS.gene057534:intron
TCAGTCACCATGTATGTTGA+TGG 0.421199 7.2:-85132037 None:intergenic
AACTTGACCAACAATATCTA+TGG 0.426096 7.2:+85130971 MS.gene057534:CDS
GAAATTTATAAGAACCGTTA+AGG 0.430047 7.2:+85132320 MS.gene057534:CDS
ATCCGTAAGAGTTGGTTGAT+TGG 0.431518 7.2:-85131853 None:intergenic
CTTTCTTCCAAATCAGATAG+AGG 0.449186 7.2:-85132124 None:intergenic
GGTTCAGATTAACAACAAAT+CGG 0.467270 7.2:-85131516 None:intergenic
ACTGGTCAAAGCAGCCTTTG+AGG 0.467868 7.2:-85131476 None:intergenic
AGCCAATCAACCAACTCTTA+CGG 0.474039 7.2:+85131851 MS.gene057534:CDS
TTACGTCTGCTGCAAAAGCT+TGG 0.475407 7.2:+85131300 MS.gene057534:CDS
GAATATTCAAACCTAGAAAA+CGG 0.489274 7.2:+85131204 MS.gene057534:CDS
CTCTTTCTTGTCGATATCAA+CGG 0.507273 7.2:-85131355 None:intergenic
GAATTGGGATTGCAGAAGAA+AGG 0.522878 7.2:+85131104 MS.gene057534:CDS
CAAGTTATCCTTAACCTCAA+AGG 0.525899 7.2:+85131462 MS.gene057534:CDS
CGTTGATATCGACAAGAAAG+AGG 0.528677 7.2:+85131356 MS.gene057534:CDS
ATTTATCAAAATTGGTGTGA+AGG 0.530078 7.2:+85132147 MS.gene057534:CDS
ATGACAATACTTTATAGGTA+AGG 0.538944 7.2:-85131887 None:intergenic
TATCAAAATTGGTGTGAAGG+AGG 0.540793 7.2:+85132150 MS.gene057534:CDS
AGAGTTCTGTATGCTGAAGC+TGG 0.551876 7.2:+85130812 MS.gene057534:CDS
ATCAACCAACTCTTACGGAT+TGG 0.553458 7.2:+85131856 MS.gene057534:CDS
TATGTGACCATAGATATTGT+TGG 0.554667 7.2:-85130978 None:intergenic
ACTCAATCAGTTGAACAAGT+TGG 0.569191 7.2:+85130749 MS.gene057534:CDS
AGCTACCGTCTGACGAGGAT+AGG 0.574810 7.2:+85131569 MS.gene057534:CDS
ATTTATAAGAACCGTTAAGG+TGG 0.581384 7.2:+85132323 MS.gene057534:CDS
CTGCACCAATCCGTAAGAGT+TGG 0.584600 7.2:-85131861 None:intergenic
TCAAATTGCGTCGCAATGAG+AGG 0.590810 7.2:-85131829 None:intergenic
TCGCACACAAAATACTGCAC+AGG 0.606391 7.2:-85131081 None:intergenic
ATCTGCCTATCCTCGTCAGA+CGG 0.609788 7.2:-85131574 None:intergenic
GCTCAATCCTAGAAACTCGA+TGG 0.610851 7.2:+85131017 MS.gene057534:CDS
TAAAGGACCATCAACATACA+TGG 0.613232 7.2:+85132030 MS.gene057534:intron
TTTCTAGGTTTGAATATTCG+GGG 0.622034 7.2:-85131200 None:intergenic
TGGAGAGCTACCGTCTGACG+AGG 0.643207 7.2:+85131564 MS.gene057534:CDS
ATATTGCAAAGCAGATGTTG+AGG 0.659281 7.2:-85132289 None:intergenic
GATTGCAGAAGAAAGGACAG+TGG 0.732973 7.2:+85131111 MS.gene057534:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! CTTATTCATTAAATGTTACA+GGG + chr7.2:85132240-85132259 MS.gene057534:intron 20.0%
!! GAAGAAAGATTTATCAAAAT+TGG + chr7.2:85132139-85132158 MS.gene057534:CDS 20.0%
!! TAAGTATGACAATACTTTAT+AGG - chr7.2:85131895-85131914 None:intergenic 20.0%
!! TATTGCAAGATTAATGTATA+AGG + chr7.2:85130888-85130907 MS.gene057534:intron 20.0%
!!! CTCTAATTGATTATTTCTAT+AGG + chr7.2:85131426-85131445 MS.gene057534:intron 20.0%
!!! GTTCTTCTTTAAAATAAAAC+TGG - chr7.2:85131497-85131516 None:intergenic 20.0%
!!! TTGTTCATTTGATTTTCTTA+CGG - chr7.2:85131614-85131633 None:intergenic 20.0%
! AGATATATATTTAATGTCGC+AGG + chr7.2:85131783-85131802 MS.gene057534:intron 25.0%
! ATGACAATACTTTATAGGTA+AGG - chr7.2:85131890-85131909 None:intergenic 25.0%
! ATTTATCAAAATTGGTGTGA+AGG + chr7.2:85132147-85132166 MS.gene057534:CDS 25.0%
! GAAATTTATAAGAACCGTTA+AGG + chr7.2:85132320-85132339 MS.gene057534:CDS 25.0%
! GAATATTCAAACCTAGAAAA+CGG + chr7.2:85131204-85131223 MS.gene057534:CDS 25.0%
! GATATATATTTAATGTCGCA+GGG + chr7.2:85131784-85131803 MS.gene057534:intron 25.0%
! GATTATTCTCACGATAAAAT+TGG + chr7.2:85131964-85131983 MS.gene057534:intron 25.0%
! GCTTATTCATTAAATGTTAC+AGG + chr7.2:85132239-85132258 MS.gene057534:intron 25.0%
! TGCGACATTAAATATATATC+TGG - chr7.2:85131784-85131803 None:intergenic 25.0%
!! AAATGATGATTTTGCAATAG+AGG - chr7.2:85132008-85132027 None:intergenic 25.0%
!! AACAATTTAGAGTTTCTGAT+TGG + chr7.2:85131544-85131563 MS.gene057534:CDS 25.0%
!! GAAACTCTAAATTGTTTCTT+CGG - chr7.2:85131540-85131559 None:intergenic 25.0%
!! GCAAAATCATCATTTGTTAA+AGG + chr7.2:85132013-85132032 MS.gene057534:intron 25.0%
!! GTTTTCTAGGTTTGAATATT+CGG - chr7.2:85131205-85131224 None:intergenic 25.0%
!! TTTTCTAGGTTTGAATATTC+GGG - chr7.2:85131204-85131223 None:intergenic 25.0%
AAAAGTTCCTCTATCTGATT+TGG + chr7.2:85132117-85132136 MS.gene057534:CDS 30.0%
AAAGTCAATAAAATCATCCC+CGG - chr7.2:85131653-85131672 None:intergenic 30.0%
AACTTGACCAACAATATCTA+TGG + chr7.2:85130971-85130990 MS.gene057534:CDS 30.0%
AATATTGAAGCAGTGAGATT+TGG + chr7.2:85130916-85130935 MS.gene057534:intron 30.0%
AATCTTGCAATAGTACTTAG+AGG - chr7.2:85130880-85130899 None:intergenic 30.0%
ACTTACTATGATCACAAAAG+TGG + chr7.2:85131910-85131929 MS.gene057534:intron 30.0%
AGGAACAAAAAATGCTATTG+TGG + chr7.2:85131153-85131172 MS.gene057534:CDS 30.0%
ATTTATAAGAACCGTTAAGG+TGG + chr7.2:85132323-85132342 MS.gene057534:CDS 30.0%
CTTACTATGATCACAAAAGT+GGG + chr7.2:85131911-85131930 MS.gene057534:intron 30.0%
GGAACAAAAAATGCTATTGT+GGG + chr7.2:85131154-85131173 MS.gene057534:CDS 30.0%
GGTTCAGATTAACAACAAAT+CGG - chr7.2:85131519-85131538 None:intergenic 30.0%
TATCAATCTTACAAAATCCG+CGG + chr7.2:85131942-85131961 MS.gene057534:intron 30.0%
TATGTGACCATAGATATTGT+TGG - chr7.2:85130981-85131000 None:intergenic 30.0%
TTTCTAGGTTTGAATATTCG+GGG - chr7.2:85131203-85131222 None:intergenic 30.0%
AAACTTGCCCCAAAAACATT+AGG - chr7.2:85131282-85131301 None:intergenic 35.0%
ACTCAATCAGTTGAACAAGT+TGG + chr7.2:85130749-85130768 MS.gene057534:CDS 35.0%
ATATTGCAAAGCAGATGTTG+AGG - chr7.2:85132292-85132311 None:intergenic 35.0%
CAAGTTATCCTTAACCTCAA+AGG + chr7.2:85131462-85131481 MS.gene057534:CDS 35.0%
CTATATTCAGTTTGAGCTTC+TGG - chr7.2:85131053-85131072 None:intergenic 35.0%
CTCTTTCTTGTCGATATCAA+CGG - chr7.2:85131358-85131377 None:intergenic 35.0%
CTTTCTTCCAAATCAGATAG+AGG - chr7.2:85132127-85132146 None:intergenic 35.0%
TAAAGGACCATCAACATACA+TGG + chr7.2:85132030-85132049 MS.gene057534:intron 35.0%
TAATCTTCCATCGAGTTTCT+AGG - chr7.2:85131027-85131046 None:intergenic 35.0%
TATCAAAATTGGTGTGAAGG+AGG + chr7.2:85132150-85132169 MS.gene057534:CDS 35.0%
TCAACATCTGCTTTGCAATA+TGG + chr7.2:85132291-85132310 MS.gene057534:CDS 35.0%
TTTATCGTGAGAATAATCCG+CGG - chr7.2:85131962-85131981 None:intergenic 35.0%
! AAATTCTGTTTGTTGAAGCC+GGG + chr7.2:85131632-85131651 MS.gene057534:intron 35.0%
! ACGTGATGCCTAATGTTTTT+GGG + chr7.2:85131271-85131290 MS.gene057534:CDS 35.0%
! AGTATTTTGTGTGCGAGAAT+TGG + chr7.2:85131088-85131107 MS.gene057534:CDS 35.0%
! AGTTTTCTAACATTCCCCTT+AGG + chr7.2:85131679-85131698 MS.gene057534:intron 35.0%
! CAAATTCTGTTTGTTGAAGC+CGG + chr7.2:85131631-85131650 MS.gene057534:intron 35.0%
! CCTTAACAAAACCGTTTTCT+AGG - chr7.2:85131218-85131237 None:intergenic 35.0%
! GTATTTTGTGTGCGAGAATT+GGG + chr7.2:85131089-85131108 MS.gene057534:CDS 35.0%
! TACGTGATGCCTAATGTTTT+TGG + chr7.2:85131270-85131289 MS.gene057534:CDS 35.0%
!! GAGTTTTAGTCGACAAAGAA+AGG + chr7.2:85130786-85130805 MS.gene057534:CDS 35.0%
!! GATGTCGTTTGAGCATTTTT+AGG + chr7.2:85131133-85131152 MS.gene057534:CDS 35.0%
!!! CCTAGAAAACGGTTTTGTTA+AGG + chr7.2:85131215-85131234 MS.gene057534:CDS 35.0%
AGAAGAGAATCCTTGAAGCA+TGG - chr7.2:85131716-85131735 None:intergenic 40.0%
AGCCAATCAACCAACTCTTA+CGG + chr7.2:85131851-85131870 MS.gene057534:CDS 40.0%
ATCAACCAACTCTTACGGAT+TGG + chr7.2:85131856-85131875 MS.gene057534:CDS 40.0%
ATTGAGCAGCATTTCTTTGC+AGG - chr7.2:85131004-85131023 None:intergenic 40.0%
CGTTGATATCGACAAGAAAG+AGG + chr7.2:85131356-85131375 MS.gene057534:CDS 40.0%
GAAGAGAATCCTTGAAGCAT+GGG - chr7.2:85131715-85131734 None:intergenic 40.0%
GAATTGGGATTGCAGAAGAA+AGG + chr7.2:85131104-85131123 MS.gene057534:CDS 40.0%
TCAGTCACCATGTATGTTGA+TGG - chr7.2:85132040-85132059 None:intergenic 40.0%
TTCTAACATTCCCCTTAGGA+GGG + chr7.2:85131683-85131702 MS.gene057534:intron 40.0%
TTTCTAACATTCCCCTTAGG+AGG + chr7.2:85131682-85131701 MS.gene057534:intron 40.0%
! AATTCTGTTTGTTGAAGCCG+GGG + chr7.2:85131633-85131652 MS.gene057534:intron 40.0%
! ATCCGTAAGAGTTGGTTGAT+TGG - chr7.2:85131856-85131875 None:intergenic 40.0%
!! CGTGATGCCTAATGTTTTTG+GGG + chr7.2:85131272-85131291 MS.gene057534:CDS 40.0%
AGAGTTCTGTATGCTGAAGC+TGG + chr7.2:85130812-85130831 MS.gene057534:CDS 45.0%
ATGGGTAAAACCCCTCCTAA+GGG - chr7.2:85131697-85131716 None:intergenic 45.0%
GATTGCAGAAGAAAGGACAG+TGG + chr7.2:85131111-85131130 MS.gene057534:CDS 45.0%
GCTCAATCCTAGAAACTCGA+TGG + chr7.2:85131017-85131036 MS.gene057534:CDS 45.0%
TCAAATTGCGTCGCAATGAG+AGG - chr7.2:85131832-85131851 None:intergenic 45.0%
TCGCACACAAAATACTGCAC+AGG - chr7.2:85131084-85131103 None:intergenic 45.0%
TCTAACATTCCCCTTAGGAG+GGG + chr7.2:85131684-85131703 MS.gene057534:intron 45.0%
TCTGTATGCTGAAGCTGGTA+AGG + chr7.2:85130817-85130836 MS.gene057534:intron 45.0%
TTACGTCTGCTGCAAAAGCT+TGG + chr7.2:85131300-85131319 MS.gene057534:CDS 45.0%
!! CAAAGCAGCCTTTGAGGTTA+AGG - chr7.2:85131473-85131492 None:intergenic 45.0%
ACTGGTCAAAGCAGCCTTTG+AGG - chr7.2:85131479-85131498 None:intergenic 50.0%
ATCTGCCTATCCTCGTCAGA+CGG - chr7.2:85131577-85131596 None:intergenic 50.0%
CATGGGTAAAACCCCTCCTA+AGG - chr7.2:85131698-85131717 None:intergenic 50.0%
CTGCACCAATCCGTAAGAGT+TGG - chr7.2:85131864-85131883 None:intergenic 50.0%
TGGGTAAAACCCCTCCTAAG+GGG - chr7.2:85131696-85131715 None:intergenic 50.0%
! GGGGTTTTACCCATGCTTCA+AGG + chr7.2:85131703-85131722 MS.gene057534:intron 50.0%
AGCTACCGTCTGACGAGGAT+AGG + chr7.2:85131569-85131588 MS.gene057534:CDS 55.0%
TGGAGAGCTACCGTCTGACG+AGG + chr7.2:85131564-85131583 MS.gene057534:CDS 60.0%


Chromosome Type Strat End Strand Name
chr7.2 gene 85130734 85132353 85130734 ID=MS.gene057534
chr7.2 mRNA 85130734 85132353 85130734 ID=MS.gene057534.t1;Parent=MS.gene057534
chr7.2 exon 85130734 85130833 85130734 ID=MS.gene057534.t1.exon1;Parent=MS.gene057534.t1
chr7.2 CDS 85130734 85130833 85130734 ID=cds.MS.gene057534.t1;Parent=MS.gene057534.t1
chr7.2 exon 85130926 85131381 85130926 ID=MS.gene057534.t1.exon2;Parent=MS.gene057534.t1
chr7.2 CDS 85130926 85131381 85130926 ID=cds.MS.gene057534.t1;Parent=MS.gene057534.t1
chr7.2 exon 85131452 85131612 85131452 ID=MS.gene057534.t1.exon3;Parent=MS.gene057534.t1
chr7.2 CDS 85131452 85131612 85131452 ID=cds.MS.gene057534.t1;Parent=MS.gene057534.t1
chr7.2 exon 85131805 85131928 85131805 ID=MS.gene057534.t1.exon4;Parent=MS.gene057534.t1
chr7.2 CDS 85131805 85131928 85131805 ID=cds.MS.gene057534.t1;Parent=MS.gene057534.t1
chr7.2 exon 85132035 85132171 85132035 ID=MS.gene057534.t1.exon5;Parent=MS.gene057534.t1
chr7.2 CDS 85132035 85132171 85132035 ID=cds.MS.gene057534.t1;Parent=MS.gene057534.t1
chr7.2 exon 85132261 85132353 85132261 ID=MS.gene057534.t1.exon6;Parent=MS.gene057534.t1
chr7.2 CDS 85132261 85132353 85132261 ID=cds.MS.gene057534.t1;Parent=MS.gene057534.t1
Gene Sequence

>MS.gene057534

ATGGCTGCAATCGAAACTCAATCAGTTGAACAAGTTGGCAAAGTTAGCTTGCGAGTTTTAGTCGACAAAGAAAGGAATAGAGTTCTGTATGCTGAAGCTGGTAAGGATTTCGTCGATGTTCTCTTTTTAGTTTCTTAACATTGCCTCTAAGTACTATTGCAAGATTAATGTATAAGGATTCAAATATTGAAGCAGTGAGATTTGGTAGCATTAGCTCGTTGTATCGAAGTGTGTCGAAACTTGACCAACAATATCTATGGTCACATACCTGCAAAGAAATGCTGCTCAATCCTAGAAACTCGATGGAAGATTATTGCCAGAAGCTCAAACTGAATATAGACGACACGCCTGTGCAGTATTTTGTGTGCGAGAATTGGGATTGCAGAAGAAAGGACAGTGGATGTCGTTTGAGCATTTTTAGGAACAAAAAATGCTATTGTGGGAAAGTAATGAATAGAGAAGTATTCCCCGAATATTCAAACCTAGAAAACGGTTTTGTTAAGGAAAATGTTACTTTTATCGTTTCTGATGATCTATACGTGATGCCTAATGTTTTTGGGGCAAGTTTACGTCTGCTGCAAAAGCTTGGACTCGATGCTATTGATGCTATTGAAGAACAAACCGTTGATATCGACAAGAAAGAGGCATGTTGTCTCATCTTCTATATATCTTCTTTAAATATTAATTATTTTCTCTAATTGATTATTTCTATAGGTAGTTGATCTTCTCAAGTTATCCTTAACCTCAAAGGCTGCTTTGACCAGTTTTATTTTAAAGAAGAACCGATTTGTTGTTAATCTGAACCGAAGAAACAATTTAGAGTTTCTGATTGGAGAGCTACCGTCTGACGAGGATAGGCAGATATCTGTGAAAGTTACCGTAAGAAAATCAAATGAACAAATTCTGTTTGTTGAAGCCGGGGATGATTTTATTGACTTTGTCTTTAGTTTTCTAACATTCCCCTTAGGAGGGGTTTTACCCATGCTTCAAGGATTCTCTTCTTTAAGCTGCATTGATAACTTATACAAGAGCTTGTGTGACTTGAGTCCAGATATATATTTAATGTCGCAGGGACTCAAAGATAAACTAACTAAGCCTCTCATTGCGACGCAATTTGAGCCAATCAACCAACTCTTACGGATTGGTGCAGCTACCTTACCTATAAAGTATTGTCATACTTACTATGATCACAAAAGTGGGAAGTGTGTTATCAATCTTACAAAATCCGCGGATTATTCTCACGATAAAATTGGTTGATCATGATCATGATTCCTCTATTGCAAAATCATCATTTGTTAAAGGACCATCAACATACATGGTGACTGATAGCTTGTTTGTGAGTCTAATGTCGTCAATATCTGCAATGTCATTTCTCAAAAGATCAAAAGTTCCTCTATCTGATTTGGAAGAAAGATTTATCAAAATTGGTGTGAAGGAGGTAAGCATTTACATAAGACGTGTCATTTATCGCTATTTATTTTCATTTGCTTACTTCAAACTTACTAGCTTATTCATTAAATGTTACAGGGACTTAGCATATTAAAAGCTTCTTTGACCTCAACATCTGCTTTGCAATATGGATTGAAGAAATTTATAAGAACCGTTAAGGTGGAGAAATGA
Protein sequence

>MS.gene057534.t1

MAAIETQSVEQVGKVSLRVLVDKERNRVLYAEAAVRFGSISSLYRSVSKLDQQYLWSHTCKEMLLNPRNSMEDYCQKLKLNIDDTPVQYFVCENWDCRRKDSGCRLSIFRNKKCYCGKVMNREVFPEYSNLENGFVKENVTFIVSDDLYVMPNVFGASLRLLQKLGLDAIDAIEEQTVDIDKKEAFDLLKLSLTSKAALTSFILKKNRFVVNLNRRNNLEFLIGELPSDEDRQISVKVTGLKDKLTKPLIATQFEPINQLLRIGAATLPIKYCHTYYDHKRPSTYMVTDSLFVSLMSSISAMSFLKRSKVPLSDLEERFIKIGVKEGLSILKASLTSTSALQYGLKKFIRTVKVEK