Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene94770.t1 | XP_013449064.1 | 80.1 | 473 | 93 | 1 | 1 | 472 | 1 | 473 | 1.10E-204 | 723 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene94770.t1 | A0A072U0X9 | 80.1 | 473 | 93 | 1 | 1 | 472 | 1 | 473 | 7.7e-205 | 723.0 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene94770.t1 | MTR_7g066340 | 80.127 | 473 | 93 | 1 | 1 | 472 | 1 | 473 | 0.0 | 762 |
MS.gene94770.t1 | MTR_7g066310 | 67.457 | 464 | 87 | 2 | 9 | 472 | 4 | 403 | 0.0 | 604 |
MS.gene94770.t1 | MTR_7g066350 | 63.812 | 467 | 149 | 8 | 1 | 456 | 1 | 458 | 0.0 | 560 |
MS.gene94770.t1 | MTR_7g066280 | 67.824 | 432 | 67 | 2 | 91 | 472 | 1 | 410 | 0.0 | 559 |
MS.gene94770.t1 | MTR_7g066260 | 58.282 | 489 | 180 | 10 | 6 | 476 | 9 | 491 | 0.0 | 525 |
MS.gene94770.t1 | MTR_1g041315 | 60.626 | 447 | 155 | 6 | 7 | 436 | 9 | 451 | 0.0 | 521 |
MS.gene94770.t1 | MTR_7g066570 | 52.390 | 544 | 204 | 12 | 3 | 510 | 5 | 529 | 3.74e-165 | 482 |
MS.gene94770.t1 | MTR_7g066400 | 55.224 | 469 | 155 | 8 | 1 | 449 | 1 | 434 | 2.03e-162 | 470 |
MS.gene94770.t1 | MTR_7g066360 | 52.569 | 506 | 194 | 12 | 6 | 498 | 8 | 480 | 7.57e-152 | 444 |
MS.gene94770.t1 | MTR_7g012680 | 52.643 | 473 | 181 | 9 | 3 | 458 | 5 | 451 | 1.54e-148 | 435 |
MS.gene94770.t1 | MTR_7g066290 | 54.902 | 459 | 163 | 11 | 6 | 453 | 9 | 434 | 1.25e-146 | 429 |
MS.gene94770.t1 | MTR_7g058710 | 50.913 | 493 | 185 | 10 | 1 | 452 | 1 | 477 | 6.29e-146 | 429 |
MS.gene94770.t1 | MTR_7g066580 | 46.341 | 492 | 168 | 11 | 18 | 458 | 1 | 447 | 7.84e-127 | 379 |
MS.gene94770.t1 | MTR_7g058700 | 48.098 | 447 | 158 | 7 | 24 | 452 | 531 | 921 | 3.88e-118 | 372 |
MS.gene94770.t1 | MTR_2g029400 | 45.319 | 470 | 148 | 10 | 6 | 440 | 8 | 403 | 7.99e-113 | 342 |
MS.gene94770.t1 | MTR_2g029400 | 29.000 | 200 | 111 | 8 | 255 | 446 | 7 | 183 | 6.62e-11 | 65.1 |
MS.gene94770.t1 | MTR_7g066430 | 40.984 | 488 | 235 | 8 | 12 | 452 | 4 | 485 | 1.08e-111 | 342 |
MS.gene94770.t1 | MTR_7g066430 | 28.511 | 235 | 147 | 7 | 9 | 231 | 254 | 479 | 6.46e-16 | 80.9 |
MS.gene94770.t1 | MTR_7g066410 | 39.882 | 509 | 232 | 11 | 12 | 452 | 10 | 512 | 4.61e-109 | 336 |
MS.gene94770.t1 | MTR_7g066480 | 39.427 | 454 | 220 | 8 | 11 | 454 | 15 | 423 | 6.89e-93 | 291 |
MS.gene94770.t1 | MTR_7g066490 | 40.045 | 447 | 211 | 10 | 12 | 454 | 16 | 409 | 6.38e-89 | 281 |
MS.gene94770.t1 | MTR_7g062280 | 35.903 | 493 | 261 | 10 | 5 | 452 | 3 | 485 | 2.42e-87 | 279 |
MS.gene94770.t1 | MTR_7g062300 | 36.458 | 480 | 266 | 11 | 1 | 450 | 1 | 471 | 3.43e-87 | 278 |
MS.gene94770.t1 | MTR_7g063660 | 35.174 | 489 | 253 | 12 | 7 | 452 | 4 | 471 | 3.23e-86 | 276 |
MS.gene94770.t1 | MTR_7g063820 | 37.172 | 495 | 245 | 13 | 5 | 452 | 3 | 478 | 3.28e-85 | 273 |
MS.gene94770.t1 | MTR_7g063900 | 39.024 | 492 | 244 | 13 | 5 | 452 | 3 | 482 | 3.05e-84 | 271 |
MS.gene94770.t1 | MTR_7g063900 | 27.049 | 244 | 139 | 9 | 265 | 471 | 13 | 254 | 1.68e-14 | 76.6 |
MS.gene94770.t1 | MTR_4g019310 | 35.671 | 499 | 251 | 12 | 6 | 448 | 2 | 486 | 1.80e-82 | 266 |
MS.gene94770.t1 | MTR_4g019310 | 30.603 | 232 | 140 | 11 | 13 | 234 | 267 | 487 | 2.62e-14 | 75.9 |
MS.gene94770.t1 | MTR_7g063880 | 36.570 | 484 | 248 | 14 | 5 | 453 | 4 | 463 | 3.37e-82 | 265 |
MS.gene94770.t1 | MTR_7g063830 | 36.403 | 467 | 253 | 10 | 1 | 452 | 1 | 438 | 3.18e-81 | 261 |
MS.gene94770.t1 | MTR_7g063890 | 38.843 | 484 | 243 | 11 | 11 | 452 | 26 | 498 | 2.40e-80 | 261 |
MS.gene94770.t1 | MTR_7g063840 | 35.135 | 481 | 269 | 11 | 1 | 452 | 1 | 467 | 3.32e-78 | 254 |
MS.gene94770.t1 | MTR_3g007740 | 37.821 | 468 | 232 | 14 | 11 | 452 | 8 | 442 | 1.66e-77 | 252 |
MS.gene94770.t1 | MTR_7g063920 | 34.864 | 479 | 236 | 10 | 1 | 452 | 1 | 430 | 1.64e-76 | 249 |
MS.gene94770.t1 | MTR_4g017830 | 33.397 | 527 | 272 | 14 | 1 | 463 | 1 | 512 | 3.07e-76 | 251 |
MS.gene94770.t1 | MTR_4g017440 | 33.137 | 510 | 263 | 14 | 6 | 452 | 8 | 502 | 1.38e-72 | 241 |
MS.gene94770.t1 | MTR_4g019340 | 34.591 | 477 | 253 | 11 | 13 | 442 | 39 | 503 | 3.61e-72 | 239 |
MS.gene94770.t1 | MTR_4g019340 | 26.047 | 215 | 144 | 4 | 12 | 226 | 303 | 502 | 5.94e-12 | 68.6 |
MS.gene94770.t1 | MTR_7g066680 | 46.823 | 299 | 96 | 6 | 214 | 449 | 37 | 335 | 1.16e-69 | 228 |
MS.gene94770.t1 | MTR_7g066680 | 25.943 | 212 | 141 | 8 | 6 | 210 | 80 | 282 | 3.15e-11 | 65.5 |
MS.gene94770.t1 | MTR_3g065200 | 34.194 | 465 | 214 | 12 | 10 | 439 | 1 | 408 | 4.18e-69 | 230 |
MS.gene94770.t1 | MTR_7g063670 | 35.165 | 455 | 261 | 10 | 13 | 452 | 16 | 451 | 1.17e-67 | 226 |
MS.gene94770.t1 | MTR_4g017610 | 33.402 | 482 | 253 | 15 | 15 | 449 | 16 | 476 | 2.00e-66 | 224 |
MS.gene94770.t1 | MTR_4g017610 | 26.050 | 238 | 134 | 6 | 255 | 450 | 6 | 243 | 2.33e-11 | 66.6 |
MS.gene94770.t1 | MTR_1g014060 | 53.182 | 220 | 95 | 4 | 21 | 237 | 9 | 223 | 2.55e-66 | 221 |
MS.gene94770.t1 | MTR_1g014060 | 46.409 | 181 | 83 | 3 | 292 | 458 | 210 | 390 | 7.52e-37 | 141 |
MS.gene94770.t1 | MTR_4g017410 | 33.199 | 497 | 267 | 18 | 6 | 452 | 3 | 484 | 5.75e-66 | 223 |
MS.gene94770.t1 | MTR_4g017470 | 30.156 | 514 | 253 | 11 | 1 | 452 | 1 | 470 | 5.42e-57 | 199 |
MS.gene94770.t1 | MTR_4g017470 | 28.216 | 241 | 142 | 7 | 255 | 477 | 5 | 232 | 7.15e-14 | 74.7 |
MS.gene94770.t1 | MTR_7g066390 | 56.962 | 158 | 40 | 1 | 303 | 460 | 1 | 130 | 1.82e-49 | 168 |
MS.gene94770.t1 | MTR_4g017550 | 30.123 | 488 | 227 | 20 | 41 | 450 | 20 | 471 | 1.90e-45 | 167 |
MS.gene94770.t1 | MTR_7g063720 | 37.619 | 210 | 118 | 3 | 256 | 452 | 17 | 226 | 3.86e-37 | 138 |
MS.gene94770.t1 | MTR_7g063720 | 29.310 | 232 | 133 | 10 | 3 | 231 | 17 | 220 | 1.88e-17 | 82.4 |
MS.gene94770.t1 | MTR_7g062270 | 36.782 | 174 | 109 | 1 | 13 | 186 | 11 | 183 | 1.48e-29 | 120 |
MS.gene94770.t1 | MTR_7g100420 | 35.531 | 273 | 133 | 8 | 214 | 452 | 134 | 397 | 1.08e-27 | 115 |
MS.gene94770.t1 | MTR_2g067310 | 41.618 | 173 | 61 | 6 | 23 | 195 | 58 | 190 | 3.08e-26 | 107 |
MS.gene94770.t1 | MTR_8g023240 | 24.795 | 488 | 285 | 13 | 13 | 453 | 38 | 490 | 2.21e-25 | 110 |
MS.gene94770.t1 | MTR_7g063690 | 31.655 | 278 | 121 | 9 | 13 | 289 | 13 | 222 | 2.33e-25 | 105 |
MS.gene94770.t1 | MTR_1g115440 | 33.071 | 254 | 136 | 10 | 1 | 236 | 1 | 238 | 7.79e-25 | 103 |
MS.gene94770.t1 | MTR_8g445860 | 29.918 | 244 | 151 | 6 | 4 | 237 | 5 | 238 | 2.10e-24 | 102 |
MS.gene94770.t1 | MTR_8g445860 | 29.279 | 222 | 120 | 5 | 260 | 445 | 11 | 231 | 2.53e-20 | 90.9 |
MS.gene94770.t1 | MTR_7g063850 | 29.180 | 305 | 153 | 10 | 185 | 452 | 4 | 282 | 1.87e-23 | 101 |
MS.gene94770.t1 | MTR_7g063850 | 24.675 | 231 | 137 | 9 | 15 | 231 | 69 | 276 | 1.40e-11 | 65.9 |
MS.gene94770.t1 | MTR_0150s0010 | 31.102 | 254 | 140 | 8 | 1 | 236 | 1 | 237 | 4.07e-21 | 93.2 |
MS.gene94770.t1 | MTR_0150s0010 | 29.333 | 225 | 119 | 5 | 260 | 445 | 8 | 231 | 1.46e-19 | 88.6 |
MS.gene94770.t1 | MTR_4g019330 | 33.149 | 181 | 87 | 4 | 276 | 452 | 32 | 182 | 2.26e-19 | 86.7 |
MS.gene94770.t1 | MTR_4g019240 | 36.842 | 114 | 60 | 4 | 3 | 108 | 4 | 113 | 6.58e-15 | 73.6 |
MS.gene94770.t1 | MTR_1g115455 | 26.721 | 247 | 150 | 7 | 6 | 237 | 3 | 233 | 9.63e-15 | 74.3 |
MS.gene94770.t1 | MTR_1g115450 | 40.000 | 90 | 49 | 1 | 7 | 96 | 2 | 86 | 4.97e-14 | 69.7 |
MS.gene94770.t1 | MTR_1g115470 | 44.828 | 87 | 43 | 1 | 12 | 98 | 6 | 87 | 1.56e-13 | 73.2 |
MS.gene94770.t1 | MTR_7g063510 | 43.373 | 83 | 45 | 1 | 486 | 566 | 19 | 101 | 2.35e-12 | 63.9 |
MS.gene94770.t1 | MTR_1g115435 | 27.347 | 245 | 143 | 9 | 7 | 245 | 2 | 217 | 2.91e-12 | 66.6 |
MS.gene94770.t1 | MTR_0150s0030 | 37.363 | 91 | 51 | 2 | 6 | 95 | 2 | 87 | 1.13e-11 | 64.7 |
MS.gene94770.t1 | MTR_8g044880 | 37.113 | 97 | 55 | 2 | 6 | 101 | 2 | 93 | 2.82e-11 | 64.7 |
MS.gene94770.t1 | MTR_7g063760 | 43.939 | 66 | 36 | 1 | 388 | 452 | 2 | 67 | 6.93e-11 | 58.9 |
MS.gene94770.t1 | MTR_8g445910 | 38.462 | 91 | 50 | 2 | 6 | 95 | 2 | 87 | 9.90e-11 | 63.2 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene94770.t1 | AT3G09140 | 31.703 | 511 | 280 | 17 | 1 | 456 | 1 | 497 | 4.29e-61 | 210 |
MS.gene94770.t1 | AT5G01120 | 30.290 | 482 | 284 | 11 | 13 | 448 | 10 | 485 | 4.37e-58 | 202 |
MS.gene94770.t1 | AT3G09140 | 29.981 | 537 | 283 | 17 | 1 | 456 | 1 | 525 | 5.82e-57 | 200 |
MS.gene94770.t1 | AT5G01140 | 29.289 | 478 | 290 | 10 | 12 | 464 | 9 | 463 | 5.30e-56 | 196 |
MS.gene94770.t1 | AT5G01150 | 29.691 | 485 | 289 | 11 | 12 | 455 | 9 | 482 | 5.70e-56 | 196 |
MS.gene94770.t1 | AT5G43240 | 30.134 | 521 | 290 | 16 | 13 | 477 | 10 | 512 | 2.27e-52 | 187 |
MS.gene94770.t1 | AT5G43240 | 30.134 | 521 | 290 | 16 | 13 | 477 | 10 | 512 | 2.27e-52 | 187 |
MS.gene94770.t1 | AT5G43240 | 30.134 | 521 | 290 | 16 | 13 | 477 | 10 | 512 | 2.27e-52 | 187 |
MS.gene94770.t1 | AT5G01130 | 30.705 | 482 | 266 | 15 | 1 | 452 | 1 | 444 | 9.24e-50 | 178 |
MS.gene94770.t1 | AT3G09110 | 32.817 | 323 | 201 | 7 | 12 | 327 | 9 | 322 | 9.32e-50 | 175 |
MS.gene94770.t1 | AT3G09120 | 31.962 | 316 | 198 | 7 | 11 | 316 | 5 | 313 | 2.70e-40 | 149 |
MS.gene94770.t1 | AT5G37320 | 27.308 | 509 | 286 | 18 | 3 | 455 | 2 | 482 | 4.29e-40 | 152 |
MS.gene94770.t1 | AT5G43240 | 29.394 | 330 | 180 | 11 | 163 | 448 | 25 | 345 | 4.18e-23 | 101 |
Find 95 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TAGAGCACCATTAACGTTTA+TGG | 0.174129 | 7.1:+35867221 | MS.gene94770:CDS |
CAATGTTCAGTTTCATATTC+TGG | 0.191679 | 7.1:-35866285 | None:intergenic |
CAATTTCATTACTCAAATTC+TGG | 0.194815 | 7.1:-35866438 | None:intergenic |
GATCCTAAATCCCCTATTTC+TGG | 0.194829 | 7.1:+35867189 | MS.gene94770:CDS |
CTAGCATATCCTCCAGAAAT+AGG | 0.222209 | 7.1:-35867201 | None:intergenic |
CAGAATTTGAGTAATGAAAT+TGG | 0.244591 | 7.1:+35866439 | MS.gene94770:CDS |
TGAGCACCTGCTGAGTTTCT+TGG | 0.253622 | 7.1:-35866259 | None:intergenic |
CCTCCAGAAATAGGGGATTT+AGG | 0.261981 | 7.1:-35867192 | None:intergenic |
AAGAAAAGATACCTCTTTCT+TGG | 0.262602 | 7.1:-35866608 | None:intergenic |
CAAGGTTACCATTAGAGTTT+TGG | 0.279997 | 7.1:+35866009 | MS.gene94770:CDS |
TGATCTTCTCAAATTGTCTT+TGG | 0.284928 | 7.1:+35866723 | MS.gene94770:CDS |
GATACCTTGTAACGATTATA+AGG | 0.318916 | 7.1:+35867140 | MS.gene94770:CDS |
CTTGGTGATGTTGATATTAA+CGG | 0.332558 | 7.1:-35866590 | None:intergenic |
AAAGTTGTCGTAACAACATT+TGG | 0.340302 | 7.1:-35866514 | None:intergenic |
AATACTGTGTAAGTTTCTTC+AGG | 0.340897 | 7.1:+35866371 | MS.gene94770:CDS |
ATATCATCACTTTAAATTGT+TGG | 0.353901 | 7.1:-35983664 | None:intergenic |
GAGAACAAGACTTGCAGAAT+TGG | 0.357185 | 7.1:+35866343 | MS.gene94770:CDS |
TCAAAATTTGCTTTGACAAA+CGG | 0.362323 | 7.1:+35867481 | MS.gene94770:CDS |
TAGCATATCCTCCAGAAATA+GGG | 0.363628 | 7.1:-35867200 | None:intergenic |
GAGGAAATGGTCGTTAATAT+TGG | 0.365896 | 7.1:+35867330 | MS.gene94770:CDS |
TTAACCTCCATTCGGTTACT+TGG | 0.371862 | 7.1:-35866808 | None:intergenic |
AAATGCTTGGATTAGTTAGT+AGG | 0.377156 | 7.1:-35867083 | None:intergenic |
TAAATTATCAATGCAGCTTA+AGG | 0.378298 | 7.1:-35867001 | None:intergenic |
AACCACCATCAACATAGATT+TGG | 0.380923 | 7.1:-35983583 | None:intergenic |
AACGGCCTCAACCAGTTCAT+TGG | 0.391379 | 7.1:+35867499 | MS.gene94770:CDS |
GCTTCTTAACATTGCGCTTA+GGG | 0.394593 | 7.1:+35866098 | MS.gene94770:CDS |
TCAAATTCTGGAATTCTTCT+CGG | 0.402305 | 7.1:-35866426 | None:intergenic |
TTAAATCTCCTTCAGAAGCT+TGG | 0.404186 | 7.1:+35866535 | MS.gene94770:CDS |
AACCGAATGGAGGTTAATAT+TGG | 0.408331 | 7.1:+35866814 | MS.gene94770:CDS |
GGCAGGAAGTAGATCTGTTC+AGG | 0.408889 | 7.1:+35982863 | MS.gene94770:intron |
TCTGTCACCATAAACGTTAA+TGG | 0.411866 | 7.1:-35867228 | None:intergenic |
TACAAGGTATCGGTAATATC+TGG | 0.416442 | 7.1:-35867128 | None:intergenic |
AGCTTCTTAACATTGCGCTT+AGG | 0.417921 | 7.1:+35866097 | MS.gene94770:CDS |
ATCAACCAAATCTATGTTGA+TGG | 0.421611 | 7.1:+35983578 | MS.gene94770:CDS |
CACATTGTGTACCACCAATC+TGG | 0.423997 | 7.1:-35983482 | None:intergenic |
AAGATATGAAATACCATCAA+TGG | 0.434003 | 7.1:-35867277 | None:intergenic |
TACTATACTAACCAATGAAC+TGG | 0.434085 | 7.1:-35867510 | None:intergenic |
CTTGTCCACCAAAACTCTAA+TGG | 0.440326 | 7.1:-35866017 | None:intergenic |
TAAGCTCAGAAAAGTGCTTA+AGG | 0.445205 | 7.1:+35867043 | MS.gene94770:CDS |
ACTTAATGATGTGGAGGAAA+TGG | 0.448325 | 7.1:+35867317 | MS.gene94770:CDS |
AAAGGAAGAATCTGACGAAA+TGG | 0.451310 | 7.1:+35866843 | MS.gene94770:CDS |
TCTATTTGCTGAGGCAGATA+AGG | 0.457603 | 7.1:+35866054 | MS.gene94770:CDS |
TACCAATATTAACCTCCATT+CGG | 0.462117 | 7.1:-35866816 | None:intergenic |
GTGTACCACCAATCTGGCCT+TGG | 0.466907 | 7.1:-35983476 | None:intergenic |
CAGAAATAACGTCACTTACA+AGG | 0.471169 | 7.1:+35983526 | MS.gene94770:CDS |
GGTCAAGACCAAGGCCAGAT+TGG | 0.486546 | 7.1:+35983468 | MS.gene94770:CDS |
CTTACCTTATAATCGTTACA+AGG | 0.487269 | 7.1:-35867144 | None:intergenic |
ACTCCAATGCCATCCATTGA+TGG | 0.490084 | 7.1:+35867264 | MS.gene94770:CDS |
GGTTAATATTGGTAAAGAAA+AGG | 0.492157 | 7.1:+35866825 | MS.gene94770:CDS |
ATTTCCTCCACATCATTAAG+TGG | 0.492887 | 7.1:-35867315 | None:intergenic |
AGGAATCAGAAATGTATTTG+TGG | 0.500975 | 7.1:+35866391 | MS.gene94770:CDS |
GCATTGGAGTCACAACCAAC+TGG | 0.508849 | 7.1:-35867251 | None:intergenic |
CATCCAGCAGTATCATCATT+AGG | 0.516253 | 7.1:-35983396 | None:intergenic |
GATCTTGTTTATTGAAGCAG+AGG | 0.517035 | 7.1:+35866900 | MS.gene94770:CDS |
CAGCCTAATGATGATACTGC+TGG | 0.517497 | 7.1:+35983393 | MS.gene94770:intron |
TTTCTCACCTTTCCCTTGGG+AGG | 0.518315 | 7.1:+35866949 | MS.gene94770:CDS |
TAACCTCCATTCGGTTACTT+GGG | 0.521189 | 7.1:-35866807 | None:intergenic |
TCAGACTGTACGGAAATGCT+TGG | 0.527859 | 7.1:-35867096 | None:intergenic |
TATCAACATCACCAAGAAAG+AGG | 0.532453 | 7.1:+35866597 | MS.gene94770:CDS |
CTTGTTCTCACAGCAGAAGT+AGG | 0.541416 | 7.1:-35866329 | None:intergenic |
ATACCATCAATGGATGGCAT+TGG | 0.542259 | 7.1:-35867267 | None:intergenic |
TTATAATCGTTACAAGGTAT+CGG | 0.556667 | 7.1:-35867138 | None:intergenic |
CATTGACTCCAAGCTTCTGA+AGG | 0.561296 | 7.1:-35866543 | None:intergenic |
AATGATGATACTGCTGGATG+TGG | 0.562722 | 7.1:+35983399 | MS.gene94770:CDS |
TTTAGTCCCAAGTAACCGAA+TGG | 0.566006 | 7.1:+35866801 | MS.gene94770:CDS |
ATCAATCCAAGAAACTCAGC+AGG | 0.567136 | 7.1:+35866253 | MS.gene94770:CDS |
ACTAACCAATGAACTGGTTG+AGG | 0.567961 | 7.1:-35867504 | None:intergenic |
TAACACTCCTCCCAAGGGAA+AGG | 0.572666 | 7.1:-35866956 | None:intergenic |
AGCATATCCTCCAGAAATAG+GGG | 0.573043 | 7.1:-35867199 | None:intergenic |
CTCAGCAAAACAAGTAGACA+AGG | 0.581182 | 7.1:+35865991 | MS.gene94770:CDS |
TCTCACAGCAGAAGTAGGAC+TGG | 0.581921 | 7.1:-35866324 | None:intergenic |
GTTCGTGAGTTCAGACTGTA+CGG | 0.583858 | 7.1:-35867106 | None:intergenic |
CATATGTAACACTCCTCCCA+AGG | 0.585037 | 7.1:-35866962 | None:intergenic |
CAAGACCAAGGCCAGATTGG+TGG | 0.585622 | 7.1:+35983471 | MS.gene94770:CDS |
TATGAAATACCATCAATGGA+TGG | 0.601386 | 7.1:-35867273 | None:intergenic |
AAATAAAGTTCTATTTGCTG+AGG | 0.602370 | 7.1:+35866045 | MS.gene94770:CDS |
GTTTATGGTGACAGACCAGT+TGG | 0.602694 | 7.1:+35867236 | MS.gene94770:CDS |
AGGGACCATTGCAAAACTTG+TGG | 0.604088 | 7.1:+35866117 | MS.gene94770:CDS |
CGTTAATATTGGCCAGAAGG+AGG | 0.604404 | 7.1:+35867341 | MS.gene94770:CDS |
GGTCGTTAATATTGGCCAGA+AGG | 0.607810 | 7.1:+35867338 | MS.gene94770:CDS |
GAACGTCCCACTTAATGATG+TGG | 0.609331 | 7.1:+35867308 | MS.gene94770:CDS |
ACAGCAGAAGTAGGACTGGA+AGG | 0.610171 | 7.1:-35866320 | None:intergenic |
AAGCTTGGAGTCAATGACAT+TGG | 0.612687 | 7.1:+35866550 | MS.gene94770:CDS |
CGTCCCACTTAATGATGTGG+AGG | 0.619494 | 7.1:+35867311 | MS.gene94770:CDS |
TTAAATATAAAGTCTGACAG+AGG | 0.620186 | 7.1:-35866757 | None:intergenic |
AACCAAATCTATGTTGATGG+TGG | 0.623412 | 7.1:+35983581 | MS.gene94770:CDS |
TTTCCTCCACATCATTAAGT+GGG | 0.624477 | 7.1:-35867314 | None:intergenic |
CCTAAATCCCCTATTTCTGG+AGG | 0.628731 | 7.1:+35867192 | MS.gene94770:CDS |
AGTCCCAAGTAACCGAATGG+AGG | 0.634833 | 7.1:+35866804 | MS.gene94770:CDS |
GTTGGCAATCAAGCATATTG+TGG | 0.641007 | 7.1:-35983646 | None:intergenic |
ATATGTAACACTCCTCCCAA+GGG | 0.664294 | 7.1:-35866961 | None:intergenic |
ATGTGTTGAATGTTGCAAGA+AGG | 0.665559 | 7.1:+35983500 | MS.gene94770:CDS |
AAAGTTGAAGGTCAAGACCA+AGG | 0.676584 | 7.1:+35983459 | MS.gene94770:CDS |
GGAGTGTTACATATGCTCGA+AGG | 0.683354 | 7.1:+35866970 | MS.gene94770:CDS |
TCTATGGTCACAGACATGCA+AGG | 0.694458 | 7.1:+35866222 | MS.gene94770:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr7.1 | gene | 35865977 | 35983680 | 35865977 | ID=MS.gene94770 |
chr7.1 | mRNA | 35865977 | 35983680 | 35865977 | ID=MS.gene94770.t1;Parent=MS.gene94770 |
chr7.1 | exon | 35865977 | 35866618 | 35865977 | ID=MS.gene94770.t1.exon1;Parent=MS.gene94770.t1 |
chr7.1 | CDS | 35865977 | 35866618 | 35865977 | ID=cds.MS.gene94770.t1;Parent=MS.gene94770.t1 |
chr7.1 | exon | 35866718 | 35867362 | 35866718 | ID=MS.gene94770.t1.exon2;Parent=MS.gene94770.t1 |
chr7.1 | CDS | 35866718 | 35867362 | 35866718 | ID=cds.MS.gene94770.t1;Parent=MS.gene94770.t1 |
chr7.1 | exon | 35867451 | 35867520 | 35867451 | ID=MS.gene94770.t1.exon3;Parent=MS.gene94770.t1 |
chr7.1 | CDS | 35867451 | 35867520 | 35867451 | ID=cds.MS.gene94770.t1;Parent=MS.gene94770.t1 |
chr7.1 | exon | 35982868 | 35982926 | 35982868 | ID=MS.gene94770.t1.exon4;Parent=MS.gene94770.t1 |
chr7.1 | CDS | 35982868 | 35982926 | 35982868 | ID=cds.MS.gene94770.t1;Parent=MS.gene94770.t1 |
chr7.1 | exon | 35983396 | 35983680 | 35983396 | ID=MS.gene94770.t1.exon5;Parent=MS.gene94770.t1 |
chr7.1 | CDS | 35983396 | 35983680 | 35983396 | ID=cds.MS.gene94770.t1;Parent=MS.gene94770.t1 |
Gene Sequence |
Protein sequence |