AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene57058

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene57058.t1 MTR_7g066340 77.521 476 92 2 1 461 1 476 0.0 736
MS.gene57058.t1 MTR_7g066310 65.525 467 83 4 9 461 4 406 0.0 582
MS.gene57058.t1 MTR_7g066350 66.667 456 135 7 1 449 1 446 0.0 578
MS.gene57058.t1 MTR_1g041315 63.758 447 141 6 7 436 9 451 0.0 552
MS.gene57058.t1 MTR_7g066280 66.667 435 59 3 91 461 1 413 0.0 545
MS.gene57058.t1 MTR_7g066260 60.086 466 159 7 6 454 9 464 0.0 529
MS.gene57058.t1 MTR_7g066400 58.155 466 146 7 1 449 1 434 4.47e-177 503
MS.gene57058.t1 MTR_7g066570 56.122 490 169 8 3 456 5 484 1.42e-169 489
MS.gene57058.t1 MTR_7g066360 56.522 460 175 8 6 455 8 452 1.96e-158 457
MS.gene57058.t1 MTR_7g012680 53.797 474 178 8 3 461 5 452 1.99e-154 446
MS.gene57058.t1 MTR_7g066290 55.702 456 164 9 6 453 9 434 1.69e-151 438
MS.gene57058.t1 MTR_7g058710 48.485 495 194 11 1 452 1 477 6.42e-140 410
MS.gene57058.t1 MTR_7g066580 47.541 488 156 14 18 452 1 441 8.25e-128 378
MS.gene57058.t1 MTR_7g058700 47.545 448 159 10 24 452 531 921 1.62e-115 361
MS.gene57058.t1 MTR_7g066430 41.650 497 232 12 12 460 4 490 1.88e-114 346
MS.gene57058.t1 MTR_7g066430 27.049 244 139 8 9 231 254 479 1.18e-12 70.1
MS.gene57058.t1 MTR_2g029400 43.524 471 157 10 6 441 8 404 3.41e-113 339
MS.gene57058.t1 MTR_7g066410 40.936 513 219 13 13 452 11 512 1.45e-111 339
MS.gene57058.t1 MTR_7g066490 41.372 452 208 13 12 459 16 414 7.90e-96 295
MS.gene57058.t1 MTR_7g066490 28.972 214 114 7 260 446 14 216 4.09e-11 65.1
MS.gene57058.t1 MTR_7g066480 39.254 456 228 10 11 459 15 428 6.90e-95 293
MS.gene57058.t1 MTR_7g062300 37.552 482 254 13 1 448 1 469 1.89e-92 288
MS.gene57058.t1 MTR_7g062280 36.768 495 254 13 5 452 3 485 5.47e-91 285
MS.gene57058.t1 MTR_7g063820 38.980 490 244 14 5 452 2 478 1.48e-89 281
MS.gene57058.t1 MTR_7g063660 35.876 485 255 12 7 452 4 471 4.01e-88 277
MS.gene57058.t1 MTR_7g063880 37.423 489 253 15 5 461 4 471 8.76e-88 276
MS.gene57058.t1 MTR_7g063900 38.980 490 247 11 5 452 3 482 1.76e-87 276
MS.gene57058.t1 MTR_7g063830 37.660 470 243 12 1 452 1 438 1.01e-85 270
MS.gene57058.t1 MTR_7g063890 38.259 494 240 13 11 456 26 502 4.25e-84 268
MS.gene57058.t1 MTR_4g019310 34.698 513 260 16 6 460 2 497 1.01e-82 264
MS.gene57058.t1 MTR_7g063920 36.134 476 234 9 1 452 1 430 4.43e-82 260
MS.gene57058.t1 MTR_7g063920 32.719 217 109 11 259 460 7 201 4.91e-15 77.4
MS.gene57058.t1 MTR_7g063840 36.066 488 247 16 1 448 1 463 8.46e-81 258
MS.gene57058.t1 MTR_4g017440 34.236 517 262 14 6 460 8 508 4.39e-79 254
MS.gene57058.t1 MTR_4g019340 34.576 483 248 14 10 440 35 501 4.45e-74 241
MS.gene57058.t1 MTR_3g007740 35.792 461 251 12 11 452 8 442 1.72e-73 238
MS.gene57058.t1 MTR_3g065200 35.699 465 207 15 10 439 1 408 3.26e-73 238
MS.gene57058.t1 MTR_4g017830 32.948 519 261 16 1 451 1 500 1.39e-72 238
MS.gene57058.t1 MTR_7g066680 46.154 299 98 6 214 449 37 335 4.59e-70 226
MS.gene57058.t1 MTR_4g017410 33.268 508 264 18 6 458 3 490 4.93e-70 231
MS.gene57058.t1 MTR_4g017610 33.126 483 253 14 15 449 16 476 3.53e-69 228
MS.gene57058.t1 MTR_7g063670 34.498 458 260 11 13 452 16 451 1.73e-66 220
MS.gene57058.t1 MTR_1g014060 53.456 217 91 5 21 233 9 219 5.00e-65 214
MS.gene57058.t1 MTR_1g014060 47.568 185 79 4 292 461 210 391 7.65e-39 145
MS.gene57058.t1 MTR_4g017470 30.039 516 259 10 1 456 1 474 1.35e-60 206
MS.gene57058.t1 MTR_7g066390 58.553 152 35 2 303 454 1 124 3.41e-48 163
MS.gene57058.t1 MTR_4g017550 30.533 488 225 20 41 450 20 471 4.56e-48 172
MS.gene57058.t1 MTR_7g063720 39.720 214 116 3 252 452 13 226 1.08e-39 143
MS.gene57058.t1 MTR_7g063720 28.205 234 133 9 3 231 17 220 9.73e-19 85.9
MS.gene57058.t1 MTR_7g062270 38.857 175 104 3 13 186 11 183 2.26e-33 130
MS.gene57058.t1 MTR_2g067310 45.087 173 55 4 23 195 58 190 6.72e-32 122
MS.gene57058.t1 MTR_7g100420 32.440 336 168 11 155 452 83 397 1.74e-28 116
MS.gene57058.t1 MTR_8g023240 23.732 493 305 14 1 453 29 490 4.08e-27 114
MS.gene57058.t1 MTR_1g115440 33.200 250 143 8 1 237 1 239 1.63e-26 107
MS.gene57058.t1 MTR_7g063850 31.878 229 120 5 262 459 66 289 5.14e-25 104
MS.gene57058.t1 MTR_7g063850 25.764 229 137 9 15 231 69 276 6.08e-12 66.6
MS.gene57058.t1 MTR_8g445860 30.769 247 145 7 4 237 5 238 3.05e-24 101
MS.gene57058.t1 MTR_8g445860 27.650 217 120 4 265 445 16 231 1.87e-19 87.8
MS.gene57058.t1 MTR_0150s0010 30.800 250 148 6 1 237 1 238 9.78e-20 88.6
MS.gene57058.t1 MTR_0150s0010 28.000 225 122 4 260 445 8 231 3.21e-18 84.3
MS.gene57058.t1 MTR_4g019330 32.275 189 92 5 276 460 32 188 1.37e-19 86.7
MS.gene57058.t1 MTR_7g063690 28.826 281 125 9 13 289 13 222 4.28e-19 86.7
MS.gene57058.t1 MTR_1g115455 28.685 251 140 8 6 237 3 233 2.63e-18 84.3
MS.gene57058.t1 MTR_4g019240 36.842 114 60 4 3 108 4 113 8.57e-15 72.8
MS.gene57058.t1 MTR_1g115450 40.000 90 49 1 7 96 2 86 4.21e-14 69.7
MS.gene57058.t1 MTR_7g063760 48.485 66 33 1 388 452 2 67 6.04e-14 67.0
MS.gene57058.t1 MTR_1g115470 40.000 105 55 3 12 114 6 104 3.12e-13 71.6
MS.gene57058.t1 MTR_0150s0030 36.264 91 52 2 6 95 2 87 2.48e-11 63.5
MS.gene57058.t1 MTR_8g044880 36.082 97 56 2 6 101 2 93 6.32e-11 63.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene57058.t1 AT3G09140 31.969 513 283 16 1 460 1 500 6.29e-61 207
MS.gene57058.t1 AT5G01120 30.271 479 284 11 15 448 12 485 1.39e-60 206
MS.gene57058.t1 AT5G43240 29.901 505 290 13 15 460 12 511 2.86e-57 197
MS.gene57058.t1 AT5G43240 29.901 505 290 13 15 460 12 511 2.86e-57 197
MS.gene57058.t1 AT5G43240 29.901 505 290 13 15 460 12 511 2.86e-57 197
MS.gene57058.t1 AT3G09140 30.241 539 286 16 1 460 1 528 6.35e-57 197
MS.gene57058.t1 AT5G01150 29.388 490 280 12 12 453 9 480 1.30e-55 192
MS.gene57058.t1 AT5G01140 29.193 483 275 12 12 460 9 458 3.45e-54 188
MS.gene57058.t1 AT3G09110 32.615 325 199 8 12 327 9 322 2.36e-51 177
MS.gene57058.t1 AT5G01130 28.992 476 282 14 1 452 1 444 5.90e-50 176
MS.gene57058.t1 AT5G37320 27.634 503 286 19 3 452 2 479 3.98e-41 153
MS.gene57058.t1 AT3G09120 30.818 318 199 8 11 316 5 313 1.47e-39 145
MS.gene57058.t1 AT3G09120 29.412 221 112 9 267 446 12 229 4.98e-12 67.4
MS.gene57058.t1 AT5G43240 28.779 344 193 9 165 460 28 367 1.25e-27 114

Find 82 sgRNAs with CRISPR-Local

Find 254 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCTTGCTTATGTTGATATTA+AGG 0.164334 7.4:-38586896 None:intergenic
TAGAGCACCATTAACGTTTA+TGG 0.174129 7.4:+38590129 MS.gene57058:CDS
CCTCCAGAAATAGGGGATTT+TGG 0.181844 7.4:-38590100 None:intergenic
CAATGTTCAGTTTCATATTC+TGG 0.191679 7.4:-38586590 None:intergenic
GATCCAAAATCCCCTATTTC+TGG 0.204437 7.4:+38590097 MS.gene57058:CDS
CCGACCTCCGATCTGTTTCT+TGG 0.207965 7.4:-38589716 None:intergenic
CCATTTCCTCCACATCATTA+AGG 0.209295 7.4:-38590225 None:intergenic
CTAGCATATCCTCCAGAAAT+AGG 0.222209 7.4:-38590109 None:intergenic
TGAGCACCTGCTGTGTTTCT+TGG 0.223634 7.4:-38586564 None:intergenic
GTCAGACTTCATATTTAAAA+AGG 0.246204 7.4:+38589670 MS.gene57058:CDS
AGATTTGCGAAATTGAAAAT+AGG 0.270663 7.4:+38586655 MS.gene57058:CDS
CAAAGTTATCATTAGAGTTT+TGG 0.270973 7.4:+38586314 MS.gene57058:CDS
TCTTCCTTATAATTGTTATA+AGG 0.277945 7.4:-38590052 None:intergenic
TAAATTATCAATGCAGCTTA+TGG 0.282491 7.4:-38589909 None:intergenic
TAATCTTCTCAAATTGTCTT+TGG 0.289830 7.4:+38589631 MS.gene57058:CDS
GGGACTGTTCAAGTTTCTTC+AGG 0.312481 7.4:+38586676 MS.gene57058:CDS
TGTCATTGACTCCATGCTTC+TGG 0.316064 7.4:-38586851 None:intergenic
CGATTTCTTTACTCAAAATC+AGG 0.337067 7.4:-38586743 None:intergenic
AAACTTGCCGTAACAACATT+TGG 0.344783 7.4:-38586819 None:intergenic
GATACCTTATAACAATTATA+AGG 0.355482 7.4:+38590048 MS.gene57058:CDS
TAGCATATCCTCCAGAAATA+GGG 0.363628 7.4:-38590108 None:intergenic
GAGGAAATGGTCATTAATAT+TGG 0.367390 7.4:+38590238 MS.gene57058:CDS
TATAAGGTATCGGTAATATC+TGG 0.373860 7.4:-38590036 None:intergenic
TATTCCCTATTACCTCCTTC+TGG 0.379109 7.4:-38590261 None:intergenic
AAATGCTTGGATTAGTTAGT+AGG 0.380859 7.4:-38589991 None:intergenic
GCTTCTTAACATTGCGCTTA+GGG 0.394593 7.4:+38586403 MS.gene57058:CDS
CATTTCCTCCACATCATTAA+GGG 0.397517 7.4:-38590224 None:intergenic
GATTTGCGAAATTGAAAATA+GGG 0.405308 7.4:+38586656 MS.gene57058:CDS
TCTGTCACCATAAACGTTAA+TGG 0.410819 7.4:-38590136 None:intergenic
TTTATATGGTTGCAGGGTCT+CGG 0.412461 7.4:+38590365 MS.gene57058:intron
CGACCTCCGATCTGTTTCTT+GGG 0.414289 7.4:-38589715 None:intergenic
AGCTTCTTAACATTGCGCTT+AGG 0.417921 7.4:+38586402 MS.gene57058:CDS
AATATTGAAGCACTGAGCTT+TGG 0.420564 7.4:+38586456 MS.gene57058:CDS
CCTTAATGATGTGGAGGAAA+TGG 0.422441 7.4:+38590225 MS.gene57058:CDS
TATGTATAAAATACCATCAA+TGG 0.430351 7.4:-38590185 None:intergenic
TGTTATGCCAAATGTTGTTA+CGG 0.444432 7.4:+38586812 MS.gene57058:CDS
AAAGGAACAATGTGATGAAA+TGG 0.461572 7.4:+38589751 MS.gene57058:CDS
GGTCGGGATCGGTGAAGAAA+AGG 0.473742 7.4:+38589733 MS.gene57058:CDS
TTAAATATGAAGTCTGACAT+AGG 0.484007 7.4:-38589665 None:intergenic
CAAGAAACAGATCGGAGGTC+GGG 0.485070 7.4:+38589717 MS.gene57058:CDS
TTATAATTGTTATAAGGTAT+CGG 0.485993 7.4:-38590046 None:intergenic
AACAGATCGGAGGTCGGGAT+CGG 0.492134 7.4:+38589722 MS.gene57058:CDS
ACTCCAATGTCATCCATTGA+TGG 0.495461 7.4:+38590172 MS.gene57058:CDS
TCAGACTGCATGGAAATGCT+TGG 0.498154 7.4:-38590004 None:intergenic
TATCAACATAAGCAAGAAAG+AGG 0.508368 7.4:+38586902 MS.gene57058:CDS
GATCTTGTTTATTGAAGCAG+AGG 0.517035 7.4:+38589808 MS.gene57058:CDS
TTTCTCACCTTTCCCTTGGG+AGG 0.518315 7.4:+38589857 MS.gene57058:CDS
TTTATACATAGAAAGAATGA+AGG 0.527055 7.4:+38590198 MS.gene57058:CDS
TCTATTTGCTGAGGCAGAGA+AGG 0.537242 7.4:+38586359 MS.gene57058:CDS
TATGTACTGGTTGAGGCCGT+TGG 0.555448 7.4:-38590426 None:intergenic
TTAAATCTCCTCCAGAAGCA+TGG 0.561651 7.4:+38586840 MS.gene57058:CDS
GTTCCTGAGTTCAGACTGCA+TGG 0.563810 7.4:-38590014 None:intergenic
CAACACTCCTCCCAAGGGAA+AGG 0.566939 7.4:-38589864 None:intergenic
AGCATATCCTCCAGAAATAG+GGG 0.573043 7.4:-38590107 None:intergenic
TCAACATCTGCTTTGACCAA+CGG 0.573453 7.4:+38590410 MS.gene57058:CDS
GGTCATTAATATTGGCCAGA+AGG 0.578280 7.4:+38590246 MS.gene57058:CDS
CATATGCAACACTCCTCCCA+AGG 0.586923 7.4:-38589870 None:intergenic
ATCAATCCAAGAAACACAGC+AGG 0.592546 7.4:+38586558 MS.gene57058:CDS
CTCGTTCTCACAGAGGTAGT+AGG 0.593294 7.4:-38586634 None:intergenic
ATTTCCTCCACATCATTAAG+GGG 0.596639 7.4:-38590223 None:intergenic
ATACCATCAATGGATGACAT+TGG 0.597021 7.4:-38590175 None:intergenic
ACTAACCTATGTACTGGTTG+AGG 0.600521 7.4:-38590433 None:intergenic
AAATAAAGTTCTATTTGCTG+AGG 0.602370 7.4:+38586350 MS.gene57058:CDS
AGGGACCATTGCAAAACTTG+TGG 0.604088 7.4:+38586422 MS.gene57058:CDS
TTTAGACCCAAGAAACAGAT+CGG 0.608075 7.4:+38589709 MS.gene57058:CDS
TAGTGAACTAACCTATGTAC+TGG 0.608380 7.4:-38590439 None:intergenic
GTTTATGGTGACAGATGACT+TGG 0.612440 7.4:+38590144 MS.gene57058:CDS
TTTCCATGCAGTCTGAACTC+AGG 0.615979 7.4:+38590011 MS.gene57058:CDS
CATTGACTCCATGCTTCTGG+AGG 0.619328 7.4:-38586848 None:intergenic
CCAAGAAACAGATCGGAGGT+CGG 0.621418 7.4:+38589716 MS.gene57058:CDS
CGCAAATCTCGTTCTCACAG+AGG 0.626293 7.4:-38586641 None:intergenic
CCAAAATCCCCTATTTCTGG+AGG 0.627577 7.4:+38590100 MS.gene57058:CDS
CATTAATATTGGCCAGAAGG+AGG 0.629501 7.4:+38590249 MS.gene57058:CDS
AACGGCCTCAACCAGTACAT+AGG 0.634113 7.4:+38590428 MS.gene57058:CDS
GGCAGGAAGTGAGAAGCCAA+AGG 0.636977 7.4:+38590903 MS.gene57058:intron
GGAGTGTTGCATATGCTCGA+AGG 0.640903 7.4:+38589878 MS.gene57058:CDS
ACAGAGGTAGTAGGACTGCA+AGG 0.646553 7.4:-38586625 None:intergenic
ATATGCAACACTCCTCCCAA+GGG 0.663884 7.4:-38589869 None:intergenic
GTTGGTCAAAGCAGATGTTG+AGG 0.676855 7.4:-38590408 None:intergenic
TTTCCTCCACATCATTAAGG+GGG 0.685271 7.4:-38590222 None:intergenic
TCTATGGTCACAGACATGCA+AGG 0.694458 7.4:+38586527 MS.gene57058:CDS
AGACCCAAGAAACAGATCGG+AGG 0.726967 7.4:+38589712 MS.gene57058:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATAATAATAATAATAATAA+GGG - chr7.4:38589559-38589578 None:intergenic 0.0%
!! TAATAATAATAATAATAATA+AGG - chr7.4:38589560-38589579 None:intergenic 0.0%
!! ATAAATTAACATATATGTAA+CGG + chr7.4:38588933-38588952 MS.gene57058:intron 10.0%
!! TAAAAGAATTAGTTATAAAT+TGG + chr7.4:38590629-38590648 MS.gene57058:intron 10.0%
!!! ACAAAAATTAACTTTAAAAT+AGG + chr7.4:38589424-38589443 MS.gene57058:intron 10.0%
!!! CAAAAATTAACTTTAAAATA+GGG + chr7.4:38589425-38589444 MS.gene57058:intron 10.0%
!!! TAATGATTGAAAATTTTATA+GGG - chr7.4:38589140-38589159 None:intergenic 10.0%
!! AAAACAATTATTTAGAAAAC+CGG - chr7.4:38587075-38587094 None:intergenic 15.0%
!! ACAATATTTGATTGTTTATA+TGG + chr7.4:38590351-38590370 MS.gene57058:intron 15.0%
!! TTATAATTGTTATAAGGTAT+CGG - chr7.4:38590049-38590068 None:intergenic 15.0%
!!! AAATTTTCAATCATTACTTT+TGG + chr7.4:38589144-38589163 MS.gene57058:intron 15.0%
!!! ATATGAGTTTACTTTAAAAT+AGG - chr7.4:38589172-38589191 None:intergenic 15.0%
!!! GTAATGATTGAAAATTTTAT+AGG - chr7.4:38589141-38589160 None:intergenic 15.0%
!!! TAGTGATTGAAAATTTTATA+GGG + chr7.4:38589456-38589475 MS.gene57058:intron 15.0%
!!! TATGAGTTTACTTTAAAATA+GGG - chr7.4:38589171-38589190 None:intergenic 15.0%
!!! TCTTTTGATCTTTTAATATA+TGG - chr7.4:38587921-38587940 None:intergenic 15.0%
!!! TTTGTTATCTTTTAAATGTT+TGG - chr7.4:38587670-38587689 None:intergenic 15.0%
!!! TTTTAATTACTCAATTTGAA+TGG - chr7.4:38590720-38590739 None:intergenic 15.0%
!! AAGAATTAGTTATAAATTGG+AGG + chr7.4:38590632-38590651 MS.gene57058:intron 20.0%
!! AGAAATGATTGTGATAATAT+TGG - chr7.4:38587585-38587604 None:intergenic 20.0%
!! AGGTAAAACTTCTATTTAAA+TGG + chr7.4:38588189-38588208 MS.gene57058:intron 20.0%
!! ATCTTGATGAAAAATATCTA+TGG + chr7.4:38586511-38586530 MS.gene57058:CDS 20.0%
!! ATGACATATTTGCATAATAT+TGG + chr7.4:38588678-38588697 MS.gene57058:intron 20.0%
!! ATGTAAAAATCTAACATCAA+CGG - chr7.4:38587313-38587332 None:intergenic 20.0%
!! GATACCTTATAACAATTATA+AGG + chr7.4:38590048-38590067 MS.gene57058:CDS 20.0%
!! GGTAAAACTTCTATTTAAAT+GGG + chr7.4:38588190-38588209 MS.gene57058:intron 20.0%
!! TAATAATAATCTATGAAGCA+CGG - chr7.4:38589037-38589056 None:intergenic 20.0%
!! TAGAAAAAGAAGAGAATTAA+AGG + chr7.4:38590747-38590766 MS.gene57058:intron 20.0%
!! TATGTATAAAATACCATCAA+TGG - chr7.4:38590188-38590207 None:intergenic 20.0%
!! TCTTCCTTATAATTGTTATA+AGG - chr7.4:38590055-38590074 None:intergenic 20.0%
!! TGCTTCATAGATTATTATTA+GGG + chr7.4:38589037-38589056 MS.gene57058:intron 20.0%
!! TTTATACATAGAAAGAATGA+AGG + chr7.4:38590198-38590217 MS.gene57058:CDS 20.0%
!!! AAATATGTCATTTATGCTTT+TGG - chr7.4:38588669-38588688 None:intergenic 20.0%
!!! AAATTTTCAATCACTACTTT+TGG - chr7.4:38589452-38589471 None:intergenic 20.0%
!!! AATATGTCATTTATGCTTTT+GGG - chr7.4:38588668-38588687 None:intergenic 20.0%
!!! AGTTTTTAAAGTTTAAACTC+TGG - chr7.4:38590659-38590678 None:intergenic 20.0%
!!! ATGTATCATGAAGTTTTTTT+TGG - chr7.4:38590470-38590489 None:intergenic 20.0%
!!! ATTTGTTTTAGATATTTGTC+TGG - chr7.4:38587171-38587190 None:intergenic 20.0%
!!! GAAAAGTTGGTATATTTATA+AGG - chr7.4:38589080-38589099 None:intergenic 20.0%
!!! GTAGTGATTGAAAATTTTAT+AGG + chr7.4:38589455-38589474 MS.gene57058:intron 20.0%
!!! TATATTTCATGTGTTAGTTT+AGG - chr7.4:38588745-38588764 None:intergenic 20.0%
!!! TTTGTTTTAGATATTTGTCT+GGG - chr7.4:38587170-38587189 None:intergenic 20.0%
! AAAAATTAACAAACGTGTCA+AGG + chr7.4:38587771-38587790 MS.gene57058:intron 25.0%
! AAAATTAACAAACGTGTCAA+GGG + chr7.4:38587772-38587791 MS.gene57058:intron 25.0%
! AACCGTAGATGAATTAATAA+AGG + chr7.4:38588784-38588803 MS.gene57058:intron 25.0%
! AATGCTTTCGAACATTTAAT+CGG - chr7.4:38587726-38587745 None:intergenic 25.0%
! AGATTTGCGAAATTGAAAAT+AGG + chr7.4:38586655-38586674 MS.gene57058:CDS 25.0%
! AGCAAACTTTACTAATTTAG+TGG - chr7.4:38590689-38590708 None:intergenic 25.0%
! AGGAATCAAAAATGTATTTG+TGG + chr7.4:38586696-38586715 MS.gene57058:CDS 25.0%
! ATATGTAACTCTTGTATCTA+TGG - chr7.4:38587219-38587238 None:intergenic 25.0%
! GACCTTTATTAATTCATCTA+CGG - chr7.4:38588789-38588808 None:intergenic 25.0%
! GATTTGCGAAATTGAAAATA+GGG + chr7.4:38586656-38586675 MS.gene57058:CDS 25.0%
! GTCAGACTTCATATTTAAAA+AGG + chr7.4:38589670-38589689 MS.gene57058:CDS 25.0%
! GTGCTTCATAGATTATTATT+AGG + chr7.4:38589036-38589055 MS.gene57058:intron 25.0%
! TAAAAGATAACAAAGTCGAT+CGG + chr7.4:38587676-38587695 MS.gene57058:intron 25.0%
! TAAATTATCAATGCAGCTTA+TGG - chr7.4:38589912-38589931 None:intergenic 25.0%
! TAATCTTCTCAAATTGTCTT+TGG + chr7.4:38589631-38589650 MS.gene57058:CDS 25.0%
! TAGAAATAACGATATCACTT+TGG - chr7.4:38587624-38587643 None:intergenic 25.0%
! TCTTGCTTATGTTGATATTA+AGG - chr7.4:38586899-38586918 None:intergenic 25.0%
! TGATTATTATCTATGAAGCA+CGG + chr7.4:38586965-38586984 MS.gene57058:intron 25.0%
! TGTACATGCACATATAATAA+AGG - chr7.4:38590882-38590901 None:intergenic 25.0%
! TTAAATATGAAGTCTGACAT+AGG - chr7.4:38589668-38589687 None:intergenic 25.0%
! TTATTATATGTGCATGTACA+TGG + chr7.4:38590882-38590901 MS.gene57058:intron 25.0%
! TTCACAATAGTTCACATTAA+GGG + chr7.4:38587405-38587424 MS.gene57058:intron 25.0%
! TTTACACGTGAGTATAATAT+AGG + chr7.4:38587345-38587364 MS.gene57058:intron 25.0%
! TTTCACAATAGTTCACATTA+AGG + chr7.4:38587404-38587423 MS.gene57058:intron 25.0%
!! AAATAAAGTTCTATTTGCTG+AGG + chr7.4:38586350-38586369 MS.gene57058:CDS 25.0%
!! AAGTTGAAGGAAAATTTTAG+AGG + chr7.4:38589484-38589503 MS.gene57058:intron 25.0%
!! AGTTGAAGGAAAATTTTAGA+GGG + chr7.4:38589485-38589504 MS.gene57058:intron 25.0%
!! CAAAGTTATCATTAGAGTTT+TGG + chr7.4:38586314-38586333 MS.gene57058:CDS 25.0%
!! CTTAAATCTCTGATTTGAAT+AGG + chr7.4:38589604-38589623 MS.gene57058:intron 25.0%
!! TCAAAATCAGGAATTTTTCT+CGG - chr7.4:38586734-38586753 None:intergenic 25.0%
!!! CTGATTTTGAGTAAAGAAAT+CGG + chr7.4:38586744-38586763 MS.gene57058:CDS 25.0%
!!! TCCTATGTTTTTTACATTAG+CGG + chr7.4:38588964-38588983 MS.gene57058:intron 25.0%
!!! TTGTTTTGCAAGATTATCTA+TGG - chr7.4:38588710-38588729 None:intergenic 25.0%
AAACACAAAACAAGTGGTTT+AGG - chr7.4:38588092-38588111 None:intergenic 30.0%
AAAGGAACAATGTGATGAAA+TGG + chr7.4:38589751-38589770 MS.gene57058:CDS 30.0%
AACTTGAAGAATTTCGCTAT+TGG - chr7.4:38588494-38588513 None:intergenic 30.0%
AATAGTTCACATTAAGGGTT+TGG + chr7.4:38587410-38587429 MS.gene57058:intron 30.0%
ACCGCTAATGTAAAAAACAT+AGG - chr7.4:38588968-38588987 None:intergenic 30.0%
AGGAAAAATGAATGATCGAA+AGG + chr7.4:38590767-38590786 MS.gene57058:intron 30.0%
ATAGTTCACATTAAGGGTTT+GGG + chr7.4:38587411-38587430 MS.gene57058:intron 30.0%
ATGTCTATGTAAACTATGCA+AGG + chr7.4:38587997-38588016 MS.gene57058:intron 30.0%
CAAAGAGATTCAAGATGATT+TGG - chr7.4:38587849-38587868 None:intergenic 30.0%
CAATGTTCAGTTTCATATTC+TGG - chr7.4:38586593-38586612 None:intergenic 30.0%
CGATTTCTTTACTCAAAATC+AGG - chr7.4:38586746-38586765 None:intergenic 30.0%
GAGGAAATGGTCATTAATAT+TGG + chr7.4:38590238-38590257 MS.gene57058:CDS 30.0%
TAACATATATGTAACGGTGT+CGG + chr7.4:38588939-38588958 MS.gene57058:intron 30.0%
TATCAACATAAGCAAGAAAG+AGG + chr7.4:38586902-38586921 MS.gene57058:CDS 30.0%
TATTTCGCTATTAGCGAAAT+TGG - chr7.4:38588226-38588245 None:intergenic 30.0%
TGATTGTTTATATGGTTGCA+GGG + chr7.4:38590359-38590378 MS.gene57058:intron 30.0%
TGTCTATGTAAACTATGCAA+GGG + chr7.4:38587998-38588017 MS.gene57058:intron 30.0%
TGTTATGCCAAATGTTGTTA+CGG + chr7.4:38586812-38586831 MS.gene57058:CDS 30.0%
TTATAGGGACTAAAAGTTGA+AGG + chr7.4:38589471-38589490 MS.gene57058:intron 30.0%
TTATAGGGACTAAAAGTTGA+AGG - chr7.4:38589490-38589471 None:intergenic 30.0%
TTGATGTCTCAATGAATCTA+GGG + chr7.4:38588055-38588074 MS.gene57058:intron 30.0%
TTGATTGTTTATATGGTTGC+AGG + chr7.4:38590358-38590377 MS.gene57058:intron 30.0%
TTTAGAGGGACTAAAACAAA+AGG + chr7.4:38589499-38589518 MS.gene57058:intron 30.0%
TTTCGAACATTTAATCGGTT+GGG - chr7.4:38587721-38587740 None:intergenic 30.0%
! AAGTTGAAGGAAAATTTTCG+AGG - chr7.4:38589112-38589131 None:intergenic 30.0%
! AGTTGAAGGAAAATTTTCGA+GGG - chr7.4:38589111-38589130 None:intergenic 30.0%
! TCAAATACTTTTCTCCAAGT+AGG + chr7.4:38590589-38590608 MS.gene57058:intron 30.0%
! TGTATTTTCCTGCACAAAAA+GGG + chr7.4:38588632-38588651 MS.gene57058:intron 30.0%
! TTGTATTTTCCTGCACAAAA+AGG + chr7.4:38588631-38588650 MS.gene57058:intron 30.0%
!! AAATGCTTGGATTAGTTAGT+AGG - chr7.4:38589994-38590013 None:intergenic 30.0%
!! AGTTATCATTAGAGTTTTGG+TGG + chr7.4:38586317-38586336 MS.gene57058:CDS 30.0%
!! CATGATACCAAGATTTTGAT+TGG + chr7.4:38590544-38590563 MS.gene57058:intron 30.0%
!! TATAAGGTATCGGTAATATC+TGG - chr7.4:38590039-38590058 None:intergenic 30.0%
!!! TTTTTTGCATACTTAGAGAG+AGG - chr7.4:38588137-38588156 None:intergenic 30.0%
AAACTTGCCGTAACAACATT+TGG - chr7.4:38586822-38586841 None:intergenic 35.0%
AATATAGGATCGTTTGCACA+GGG + chr7.4:38587360-38587379 MS.gene57058:intron 35.0%
AGAGAGAAACACAAAACAAG+TGG - chr7.4:38588098-38588117 None:intergenic 35.0%
AGATAGAACTATTTCGCTTG+CGG + chr7.4:38587493-38587512 MS.gene57058:intron 35.0%
AGCACAACCAATCAAAATCT+TGG - chr7.4:38590554-38590573 None:intergenic 35.0%
ATACCATCAATGGATGACAT+TGG - chr7.4:38590178-38590197 None:intergenic 35.0%
ATTTCCTCCACATCATTAAG+GGG - chr7.4:38590226-38590245 None:intergenic 35.0%
CATCTACTCTTGTAGTATTG+AGG - chr7.4:38587967-38587986 None:intergenic 35.0%
CATTTCCTCCACATCATTAA+GGG - chr7.4:38590227-38590246 None:intergenic 35.0%
CTAGATTCATTGAGACATCA+AGG - chr7.4:38588056-38588075 None:intergenic 35.0%
CTTGATGTCTCAATGAATCT+AGG + chr7.4:38588054-38588073 MS.gene57058:intron 35.0%
CTTTCGAACATTTAATCGGT+TGG - chr7.4:38587722-38587741 None:intergenic 35.0%
GAGGGACTAAAATGAAAAGT+TGG - chr7.4:38589093-38589112 None:intergenic 35.0%
TAATATAGGATCGTTTGCAC+AGG + chr7.4:38587359-38587378 MS.gene57058:intron 35.0%
TAGCATATCCTCCAGAAATA+GGG - chr7.4:38590111-38590130 None:intergenic 35.0%
TAGTGAACTAACCTATGTAC+TGG - chr7.4:38590442-38590461 None:intergenic 35.0%
TCTGTCACCATAAACGTTAA+TGG - chr7.4:38590139-38590158 None:intergenic 35.0%
TGAGCTCAGAAAAATGCTTA+AGG + chr7.4:38589951-38589970 MS.gene57058:CDS 35.0%
TGCACAAAAAGGGTAGAATA+AGG + chr7.4:38588642-38588661 MS.gene57058:intron 35.0%
TTTAGACCCAAGAAACAGAT+CGG + chr7.4:38589709-38589728 MS.gene57058:CDS 35.0%
! AAATTCTTCAAGTTTGCTCC+TGG + chr7.4:38588500-38588519 MS.gene57058:intron 35.0%
! ACTACGCTATTAGCGTATTT+TGG - chr7.4:38588339-38588358 None:intergenic 35.0%
! ATTAGCCACAAGTTTTGCAA+TGG - chr7.4:38586430-38586449 None:intergenic 35.0%
! CTACGCTATTAGCGTATTTT+GGG - chr7.4:38588338-38588357 None:intergenic 35.0%
! GATCTTGTTTATTGAAGCAG+AGG + chr7.4:38589808-38589827 MS.gene57058:CDS 35.0%
! TAGAAGTTTTACCTCTCTCT+TGG - chr7.4:38588183-38588202 None:intergenic 35.0%
! TAGAGCACCATTAACGTTTA+TGG + chr7.4:38590129-38590148 MS.gene57058:CDS 35.0%
! TTATTCTACCCTTTTTGTGC+AGG - chr7.4:38588643-38588662 None:intergenic 35.0%
!! AAGAGAAAAGAGTGTCACAA+AGG + chr7.4:38590794-38590813 MS.gene57058:intron 35.0%
!! AATATTGAAGCACTGAGCTT+TGG + chr7.4:38586456-38586475 MS.gene57058:CDS 35.0%
!! AGAGAAAAGAGTGTCACAAA+GGG + chr7.4:38590795-38590814 MS.gene57058:intron 35.0%
!!! TTTGTCTACTTGTTTTGCTG+AGG - chr7.4:38586298-38586317 None:intergenic 35.0%
AATAGCGTAGAATTCGCTGA+TGG + chr7.4:38588378-38588397 MS.gene57058:intron 40.0%
ACTCCAATGTCATCCATTGA+TGG + chr7.4:38590172-38590191 MS.gene57058:CDS 40.0%
ACTCTTGTATCTATGGTGTG+CGG - chr7.4:38587212-38587231 None:intergenic 40.0%
AGACATCAAGGATCTTGACA+TGG - chr7.4:38588044-38588063 None:intergenic 40.0%
AGCATATCCTCCAGAAATAG+GGG - chr7.4:38590110-38590129 None:intergenic 40.0%
AGCTTCTTAACATTGCGCTT+AGG + chr7.4:38586402-38586421 MS.gene57058:CDS 40.0%
AGTTATGCTATCAGCGTAAC+TGG - chr7.4:38588533-38588552 None:intergenic 40.0%
ATCAATCCAAGAAACACAGC+AGG + chr7.4:38586558-38586577 MS.gene57058:CDS 40.0%
CATTAACCAGACTACCTACT+TGG - chr7.4:38590606-38590625 None:intergenic 40.0%
CATTAATATTGGCCAGAAGG+AGG + chr7.4:38590249-38590268 MS.gene57058:CDS 40.0%
CCATTTCCTCCACATCATTA+AGG - chr7.4:38590228-38590247 None:intergenic 40.0%
CCTTAATGATGTGGAGGAAA+TGG + chr7.4:38590225-38590244 MS.gene57058:CDS 40.0%
CTAGCATATCCTCCAGAAAT+AGG - chr7.4:38590112-38590131 None:intergenic 40.0%
CTATTAGCGTAAAAGCTCCA+GGG - chr7.4:38588363-38588382 None:intergenic 40.0%
GATCCAAAATCCCCTATTTC+TGG + chr7.4:38590097-38590116 MS.gene57058:CDS 40.0%
GCGAAAACTCATGAAGAACA+TGG - chr7.4:38588316-38588335 None:intergenic 40.0%
GCTTCTTAACATTGCGCTTA+GGG + chr7.4:38586403-38586422 MS.gene57058:CDS 40.0%
GGTCATTAATATTGGCCAGA+AGG + chr7.4:38590246-38590265 MS.gene57058:CDS 40.0%
GTAAACTATGCAAGGGATGA+AGG + chr7.4:38588005-38588024 MS.gene57058:intron 40.0%
GTTATGCTATCAGCGTAACT+GGG - chr7.4:38588532-38588551 None:intergenic 40.0%
GTTTATGGTGACAGATGACT+TGG + chr7.4:38590144-38590163 MS.gene57058:CDS 40.0%
TATATGTGCATGTACATGGC+AGG + chr7.4:38590886-38590905 MS.gene57058:intron 40.0%
TATGAGTGTTACACAGGTGT+CGG - chr7.4:38587130-38587149 None:intergenic 40.0%
TATTAGCGTAAAAGCTCCAG+GGG - chr7.4:38588362-38588381 None:intergenic 40.0%
TCAACATCTGCTTTGACCAA+CGG + chr7.4:38590410-38590429 MS.gene57058:CDS 40.0%
TGTGCAGGAAAATACAAGCA+AGG - chr7.4:38588628-38588647 None:intergenic 40.0%
TTAAATCTCCTCCAGAAGCA+TGG + chr7.4:38586840-38586859 MS.gene57058:CDS 40.0%
TTATGCTATCAGCGTAACTG+GGG - chr7.4:38588531-38588550 None:intergenic 40.0%
TTTATATGGTTGCAGGGTCT+CGG + chr7.4:38590365-38590384 MS.gene57058:intron 40.0%
TTTCCTCCACATCATTAAGG+GGG - chr7.4:38590225-38590244 None:intergenic 40.0%
! AGTTTTCTCACCTTTCCCTT+GGG + chr7.4:38589854-38589873 MS.gene57058:CDS 40.0%
! TAGTTTTCTCACCTTTCCCT+TGG + chr7.4:38589853-38589872 MS.gene57058:CDS 40.0%
! TCACAAAGGGTGTGAAATCA+TGG + chr7.4:38590808-38590827 MS.gene57058:intron 40.0%
! TTTTCTCCAAGTAGGTAGTC+TGG + chr7.4:38590597-38590616 MS.gene57058:intron 40.0%
!! ACTAACCTATGTACTGGTTG+AGG - chr7.4:38590436-38590455 None:intergenic 40.0%
!! TTTTTACATTAGCGGTGTCG+CGG + chr7.4:38588972-38588991 MS.gene57058:intron 40.0%
ACGCTGATAGCATAACTCTC+TGG + chr7.4:38588536-38588555 MS.gene57058:intron 45.0%
AGCTCGTATGAGTGTTACAC+AGG - chr7.4:38587136-38587155 None:intergenic 45.0%
AGGGACCATTGCAAAACTTG+TGG + chr7.4:38586422-38586441 MS.gene57058:CDS 45.0%
ATATGCAACACTCCTCCCAA+GGG - chr7.4:38589872-38589891 None:intergenic 45.0%
ATGAAGCACGGATTCTGACA+CGG - chr7.4:38589025-38589044 None:intergenic 45.0%
ATTGGCCAGAAGGAGGTAAT+AGG + chr7.4:38590256-38590275 MS.gene57058:intron 45.0%
CAGTGAATAGTCCAAGAGAG+AGG + chr7.4:38588169-38588188 MS.gene57058:intron 45.0%
CGATATCACTTTGGACACGA+AGG - chr7.4:38587615-38587634 None:intergenic 45.0%
CTCATGAAGAACATGGCACA+AGG - chr7.4:38588309-38588328 None:intergenic 45.0%
GCTATTAGCGTAAAAGCTCC+AGG - chr7.4:38588364-38588383 None:intergenic 45.0%
GTTGGTCAAAGCAGATGTTG+AGG - chr7.4:38590411-38590430 None:intergenic 45.0%
TCAGACTGCATGGAAATGCT+TGG - chr7.4:38590007-38590026 None:intergenic 45.0%
TCGCTATTAGCGAAGCATGT+CGG + chr7.4:38588247-38588266 MS.gene57058:intron 45.0%
TCTATGGTCACAGACATGCA+AGG + chr7.4:38586527-38586546 MS.gene57058:CDS 45.0%
TTGGCCAGAAGGAGGTAATA+GGG + chr7.4:38590257-38590276 MS.gene57058:intron 45.0%
TTTCCATGCAGTCTGAACTC+AGG + chr7.4:38590011-38590030 MS.gene57058:CDS 45.0%
! CCTCCAGAAATAGGGGATTT+TGG - chr7.4:38590103-38590122 None:intergenic 45.0%
! GGGACTGTTCAAGTTTCTTC+AGG + chr7.4:38586676-38586695 MS.gene57058:CDS 45.0%
! TCTATTTGCTGAGGCAGAGA+AGG + chr7.4:38586359-38586378 MS.gene57058:CDS 45.0%
!! CCAAAATCCCCTATTTCTGG+AGG + chr7.4:38590100-38590119 MS.gene57058:CDS 45.0%
!! TGTCATTGACTCCATGCTTC+TGG - chr7.4:38586854-38586873 None:intergenic 45.0%
!!! AAAAAATTCTAAATTTTTTT+GGG - chr7.4:38589256-38589275 None:intergenic 5.0%
!!! AAAAATTCTAATTTTTTTTT+TGG + chr7.4:38589350-38589369 MS.gene57058:intron 5.0%
!!! AAAATTCTAATTTTTTTTTT+GGG + chr7.4:38589351-38589370 MS.gene57058:intron 5.0%
!!! ATGAATTTTTATATTTTTTA+TGG + chr7.4:38589295-38589314 MS.gene57058:intron 5.0%
!!! TAAAAAATTCTAAATTTTTT+TGG - chr7.4:38589257-38589276 None:intergenic 5.0%
AACGGCCTCAACCAGTACAT+AGG + chr7.4:38590428-38590447 MS.gene57058:CDS 50.0%
ACAGAGGTAGTAGGACTGCA+AGG - chr7.4:38586628-38586647 None:intergenic 50.0%
AGACCCAAGAAACAGATCGG+AGG + chr7.4:38589712-38589731 MS.gene57058:CDS 50.0%
CAAGAAACAGATCGGAGGTC+GGG + chr7.4:38589717-38589736 MS.gene57058:CDS 50.0%
CATATGCAACACTCCTCCCA+AGG - chr7.4:38589873-38589892 None:intergenic 50.0%
CCAAGAAACAGATCGGAGGT+CGG + chr7.4:38589716-38589735 MS.gene57058:CDS 50.0%
CGCAAATCTCGTTCTCACAG+AGG - chr7.4:38586644-38586663 None:intergenic 50.0%
CTCGTTCTCACAGAGGTAGT+AGG - chr7.4:38586637-38586656 None:intergenic 50.0%
GAAGGTCCCCCTTAATGATG+TGG + chr7.4:38590216-38590235 MS.gene57058:CDS 50.0%
GAGATTGCTGCTGTTACGCT+TGG - chr7.4:38587532-38587551 None:intergenic 50.0%
GATGGCGACTTTCTTCAAGG+CGG + chr7.4:38588396-38588415 MS.gene57058:intron 50.0%
GTTACGCCATCAGCGAAATC+TGG - chr7.4:38588436-38588455 None:intergenic 50.0%
GTTCCTGAGTTCAGACTGCA+TGG - chr7.4:38590017-38590036 None:intergenic 50.0%
TATGAAGCACGGACACCTCT+AGG + chr7.4:38586976-38586995 MS.gene57058:intron 50.0%
TGAGCACCTGCTGTGTTTCT+TGG - chr7.4:38586567-38586586 None:intergenic 50.0%
TTCGCTCCAGATTTCGCTGA+TGG + chr7.4:38588427-38588446 MS.gene57058:intron 50.0%
TTTCTCACCTTTCCCTTGGG+AGG + chr7.4:38589857-38589876 MS.gene57058:CDS 50.0%
! ATGTGTCGTACGGGTGTCAT+AGG - chr7.4:38587046-38587065 None:intergenic 50.0%
! CGACCTCCGATCTGTTTCTT+GGG - chr7.4:38589718-38589737 None:intergenic 50.0%
! GCTGATGGCGACTTTCTTCA+AGG + chr7.4:38588393-38588412 MS.gene57058:intron 50.0%
!! AAGCATGTCGGCTTAAGTGG+TGG + chr7.4:38588259-38588278 MS.gene57058:intron 50.0%
!! CATTGACTCCATGCTTCTGG+AGG - chr7.4:38586851-38586870 None:intergenic 50.0%
!! GGAGTGTTGCATATGCTCGA+AGG + chr7.4:38589878-38589897 MS.gene57058:CDS 50.0%
!! TATGTACTGGTTGAGGCCGT+TGG - chr7.4:38590429-38590448 None:intergenic 50.0%
AACAGATCGGAGGTCGGGAT+CGG + chr7.4:38589722-38589741 MS.gene57058:CDS 55.0%
ACATGGCACAAGGACCAACG+TGG - chr7.4:38588299-38588318 None:intergenic 55.0%
ACGCTAATAGCGTAGTCCCC+TGG + chr7.4:38588343-38588362 MS.gene57058:intron 55.0%
CAACACTCCTCCCAAGGGAA+AGG - chr7.4:38589867-38589886 None:intergenic 55.0%
CCAACGTGGCATAACCCCAT+TGG - chr7.4:38588285-38588304 None:intergenic 55.0%
CCAATGGGGTTATGCCACGT+TGG + chr7.4:38588282-38588301 MS.gene57058:intron 55.0%
CCGTACGACACATGTCGAAC+CGG + chr7.4:38587053-38587072 MS.gene57058:intron 55.0%
CGGCTTAAGTGGTGGCCAAT+GGG + chr7.4:38588267-38588286 MS.gene57058:intron 55.0%
CGGTTCGACATGTGTCGTAC+GGG - chr7.4:38587055-38587074 None:intergenic 55.0%
GGCAGGAAGTGAGAAGCCAA+AGG + chr7.4:38590903-38590922 MS.gene57058:intron 55.0%
GGCTTAAGTGGTGGCCAATG+GGG + chr7.4:38588268-38588287 MS.gene57058:intron 55.0%
GGTCCCCCTTAATGATGTGG+AGG + chr7.4:38590219-38590238 MS.gene57058:CDS 55.0%
GGTCGGGATCGGTGAAGAAA+AGG + chr7.4:38589733-38589752 MS.gene57058:CDS 55.0%
GTCCATATCGTGTCGTGTCG+CGG + chr7.4:38588996-38589015 MS.gene57058:intron 55.0%
TCGGCTTAAGTGGTGGCCAA+TGG + chr7.4:38588266-38588285 MS.gene57058:intron 55.0%
! CCGACCTCCGATCTGTTTCT+TGG - chr7.4:38589719-38589738 None:intergenic 55.0%
! CCGGTTCGACATGTGTCGTA+CGG - chr7.4:38587056-38587075 None:intergenic 55.0%
! TCGCTGATGGCGTAACTGTC+TGG + chr7.4:38588440-38588459 MS.gene57058:intron 55.0%
!! AGGTGTCGGACATCGATCGT+AGG - chr7.4:38587116-38587135 None:intergenic 55.0%
!! GCGAAGCATGTCGGCTTAAG+TGG + chr7.4:38588256-38588275 MS.gene57058:intron 55.0%
AGCGACACGCCTAGTCCTAG+AGG - chr7.4:38586994-38587013 None:intergenic 60.0%
CACCGCGACACGACACGATA+TGG - chr7.4:38589001-38589020 None:intergenic 60.0%
CTATCAGCGTAACTGGGGCG+AGG - chr7.4:38588526-38588545 None:intergenic 60.0%
TGTCAGACACCGACGCGTGT+CGG - chr7.4:38587021-38587040 None:intergenic 60.0%
!! GCACGGACACCTCTAGGACT+AGG + chr7.4:38586982-38587001 MS.gene57058:intron 60.0%
TCGCTGTGTCCGACACGCGT+CGG + chr7.4:38587009-38587028 MS.gene57058:intron 65.0%
AGCGTAACTGGGGCGAGGCC+AGG - chr7.4:38588521-38588540 None:intergenic 70.0%


Chromosome Type Strat End Strand Name
chr7.4 gene 38586282 38590936 38586282 ID=MS.gene57058
chr7.4 mRNA 38586282 38590936 38586282 ID=MS.gene57058.t1;Parent=MS.gene57058
chr7.4 exon 38586282 38586923 38586282 ID=MS.gene57058.t1.exon1;Parent=MS.gene57058.t1
chr7.4 CDS 38586282 38586923 38586282 ID=cds.MS.gene57058.t1;Parent=MS.gene57058.t1
chr7.4 exon 38589626 38590270 38589626 ID=MS.gene57058.t1.exon2;Parent=MS.gene57058.t1
chr7.4 CDS 38589626 38590270 38589626 ID=cds.MS.gene57058.t1;Parent=MS.gene57058.t1
chr7.4 exon 38590380 38590449 38590380 ID=MS.gene57058.t1.exon3;Parent=MS.gene57058.t1
chr7.4 CDS 38590380 38590449 38590380 ID=cds.MS.gene57058.t1;Parent=MS.gene57058.t1
chr7.4 exon 38590908 38590936 38590908 ID=MS.gene57058.t1.exon4;Parent=MS.gene57058.t1
chr7.4 CDS 38590908 38590936 38590908 ID=cds.MS.gene57058.t1;Parent=MS.gene57058.t1
Gene Sequence

>MS.gene57058

ATGGCTGAAAATACCTCAGCAAAACAAGTAGACAAAGTTATCATTAGAGTTTTGGTGGACAAGAAGAAAAATAAAGTTCTATTTGCTGAGGCAGAGAAGGATTTTGTTGATGTTCTTTTGAGCTTCTTAACATTGCGCTTAGGGACCATTGCAAAACTTGTGGCTAATGACTCAAATATTGAAGCACTGAGCTTTGGCAGTATTAGTTCACTGTATCAAAGTGTGTCAGATCTTGATGAAAAATATCTATGGTCACAGACATGCAAGGAAATGCTTATCAATCCAAGAAACACAGCAGGTGCTCATTGCCAGAATATGAAACTGAACATTGACAATACTGATACCTTGCAGTCCTACTACCTCTGTGAGAACGAGATTTGCGAAATTGAAAATAGGGACTGTTCAAGTTTCTTCAGGAATCAAAAATGTATTTGTGGAAAGCTGTTGAACCGAGAAAAATTCCTGATTTTGAGTAAAGAAATCGGTTTTGTTAATGAAACGTCGACGTTTATTGTATCTGATGATCTTTATGTTATGCCAAATGTTGTTACGGCAAGTTTAAATCTCCTCCAGAAGCATGGAGTCAATGACATTGATGCTATTGATAAACAAATCCTTAATATCAACATAAGCAAGAAAGAGGTATGTTTTCTTATTCTAAGTTTGTATGACATATTTTTTGTTGATTATTATCTATGAAGCACGGACACCTCTAGGACTAGGCGTGTCGCTGTGTCCGACACGCGTCGGTGTCTGACACTCCTATGACACCCGTACGACACATGTCGAACCGGTTTTCTAAATAATTGTTTTTTTCTTTACTTCGACACTCCTACGATCGATGTCCGACACCTGTGTAACACTCATACGAGCTGTGTCAGACAACCCAGACAAATATCTAAAACAAATTTTTTTTCTCTCTTGCTTCCGCACACCATAGATACAAGAGTTACATATCTTTTAAGAAATGTTGATCAGTTATGAATTATAGACATTATAGTTGATTATATCATTTTTAGCTTTTTTGACCGTTGATGTTAGATTTTTACATGTCTAAAAACTATTTACACGTGAGTATAATATAGGATCGTTTGCACAGGGAGTTGCTTCAATCATAAGCGTTTTCACAATAGTTCACATTAAGGGTTTGGGTATAAGTTGTTTGTTTGTAAAACTATTTTTCTATTCGACAATAAAAATAAAACGAGAAGAGATAGAACTATTTCGCTTGCGGTTAGAGAAATCAACCAAGCGTAACAGCAGCAATCTCTCGATCAATTAACAGATTCTAGCTTTATAACCAATATTATCACAATCATTTCTACAATATCCTTCGTGTCCAAAGTGATATCGTTATTTCTAAAGTATCGTTTAAACATTCGTGTCCAAACATTTAAAAGATAACAAAGTCGATCGGATAACTTAATCGACGATTTCCCAACCGATTAAATGTTCGAAAGCATTAAGTTCTTGATTAAAAGCGATTATCAAAAATTAACAAACGTGTCAAGGGTGATAACATAAGATAGATTGTTATTCTAGTTCTAGATTCAAGAGTTCGTGTCCAAATCATCTTGAATCTCTTTGAAAGCATTAAAAGCAAGAATAACAACAATATTGAATCATTAAGCTAGAACCATATATTAAAAGATCAAAAGATTACATAATAGCTTGTTTGATTACCTCAATACTACAAGAGTAGATGATAGCTACACATGTCTATGTAAACTATGCAAGGGATGAAGGAAAGATGAAGATTCCATGTCAAGATCCTTGATGTCTCAATGAATCTAGGGTTGAATCTACTCCTAAACCACTTGTTTTGTGTTTCTCTCTCAAGAAATAGCTCTAACCTCTCTCTAAGTATGCAAAAAATATCTTATAAAACAGTGAATAGTCCAAGAGAGAGGTAAAACTTCTATTTAAATGGGCTGAGTTCAGCCAATTTCGCTAATAGCGAAATATTCGCTATTAGCGAAGCATGTCGGCTTAAGTGGTGGCCAATGGGGTTATGCCACGTTGGTCCTTGTGCCATGTTCTTCATGAGTTTTCGCCCAAAATACGCTAATAGCGTAGTCCCCTGGAGCTTTTACGCTAATAGCGTAGAATTCGCTGATGGCGACTTTCTTCAAGGCGGTTTAAGACTTCGCTCCAGATTTCGCTGATGGCGTAACTGTCTGGACTAATTTCGCTATTAGCGAAATATTCGCCAATAGCGAAATTCTTCAAGTTTGCTCCTGGCCTCGCCCCAGTTACGCTGATAGCATAACTCTCTGGAGAAATTTCGCTATCAGCGAAAAACTCGCTAATAACGAAATATTGTGAACTTTGACAATTCTTGCTCCTTGCTTGTATTTTCCTGCACAAAAAGGGTAGAATAAGGCCCAAAAGCATAAATGACATATTTGCATAATATTGGAGTTTTCCATAGATAATCTTGCAAAACAAGTCACTAAAATGCCTAAACTAACACATGAAATATATCACTTTTGAGCACTTATCAACCGTAGATGAATTAATAAAGGTCAAATACTATGATATCTTATTGTAGAACTTTTTCTAGTGACATAAATTGCTCAAGTTAGATGTGTATATATATATATATATATATATATATATGTATTTTAGTTTTCATTTTAGATCGTCTTTAAATAAATTAACATATATGTAACGGTGTCGGTGTCCTATGTTTTTTACATTAGCGGTGTCGCGGTGTCCATATCGTGTCGTGTCGCGGTGTCCGTGTCAGAATCCGTGCTTCATAGATTATTATTAGGGTTAAATATGTTTTTGATCCTTATAAATATACCAACTTTTCATTTTAGTCCCTCGAAAATTTTCCTTCAACTTTTAGTCCCTATAAAATTTTCAATCATTACTTTTGGTCCCTATTTTAAAGTAAACTCATATGTAGAATTTATATTTTTGAATCGAATTTTGCAGAAAAATTCATAATATTATAAGAATCTCTCCCAAAAAAATTTAGAATTTTTTAACAAAACATGAATTTAATATGAATTTTTATATTTTTTATGGTTAAATATTCATATTAAATTTATGTTTTGTTAAAAAATTCTAATTTTTTTTTTGGGAAAGATTTTTACAATATTCTACACATTTCTGCACAATTTCATTAAAAAATACAAAAATTAACTTTAAAATAGGGACCAAAAGTAGTGATTGAAAATTTTATAGGGACTAAAAGTTGAAGGAAAATTTTAGAGGGACTAAAACAAAAGGTTGATATATTTATAGAGAACAAAAACATATTTAACCCTTATTATTATTATTATTATTATTATTATTATTTCTCTCACTAATTCTTAAATCTCTGATTTGAATAGGTAGTTAATCTTCTCAAATTGTCTTTGGTATCAAAAACTCCTATGTCAGACTTCATATTTAAAAAGGAACAATTTGTTAGTAATTTAGACCCAAGAAACAGATCGGAGGTCGGGATCGGTGAAGAAAAGGAACAATGTGATGAAATGGTTGTAAAAGTAGTGAGAAGAAAATCAAATAAGCAGATCTTGTTTATTGAAGCAGAGGAAGATTTTGCTGATTTTGTTTTTAGTTTTCTCACCTTTCCCTTGGGAGGAGTGTTGCATATGCTCGAAGGATTCTCTTCCATAAGCTGCATTGATAATTTATATAAGAGTGTGACTGAATTGAGCTCAGAAAAATGCTTAAGGTCACAGTATTTCAAAAACCTACTAACTAATCCAAGCATTTCCATGCAGTCTGAACTCAGGAACCAGATATTACCGATACCTTATAACAATTATAAGGAAGAAAATATATCATATAAATTTGTTGATCCAAAATCCCCTATTTCTGGAGGATATGCTAGAGCACCATTAACGTTTATGGTGACAGATGACTTGGTTGTCACTCCAATGTCATCCATTGATGGTATTTTATACATAGAAAGAATGAAGGTCCCCCTTAATGATGTGGAGGAAATGGTCATTAATATTGGCCAGAAGGAGGTAATAGGGAATATGTTCATCTTCATATCACACAGTCTTTCATTTTAATATTTCTTGTATCATCATATTTGTAACAACTAACAATATTTGATTGTTTATATGGTTGCAGGGTCTCGGCATACTTAAAGCTTCACTGACCTCAACATCTGCTTTGACCAACGGCCTCAACCAGTACATAGGTTAGTTCACTATTCAACCAAAAAAAACTTCATGATACATTATCATTTGTAATTATCATAAAAACGATACTAAAGCTCATATAGAAATTGTTTACATGATACCAAGATTTTGATTGGTTGTGCTTGTATACACTTCAAATCAAATACTTTTCTCCAAGTAGGTAGTCTGGTTAATGAGTTAAAAGAATTAGTTATAAATTGGAGGTCCAGAGTTTAAACTTTAAAAACTAACATAACCACTAAATTAGTAAAGTTTGCTTAGAAAAACCATTCAAATTGAGTAATTAAAAATGAGCATAGAAAAAGAAGAGAATTAAAGGAAAAATGAATGATCGAAAGGTGAGAAGAGAAAAGAGTGTCACAAAGGGTGTGAAATCATGGTCACTTGCTTGTTATCATGTTAATAATTTTGAATATGTGCTAATTACTCCTTTATTATATGTGCATGTACATGGCAGGAAGTGAGAAGCCAAAGGTAGAAAAATGA
Protein sequence

>MS.gene57058.t1

MAENTSAKQVDKVIIRVLVDKKKNKVLFAEAEKDFVDVLLSFLTLRLGTIAKLVANDSNIEALSFGSISSLYQSVSDLDEKYLWSQTCKEMLINPRNTAGAHCQNMKLNIDNTDTLQSYYLCENEICEIENRDCSSFFRNQKCICGKLLNREKFLILSKEIGFVNETSTFIVSDDLYVMPNVVTASLNLLQKHGVNDIDAIDKQILNINISKKEVVNLLKLSLVSKTPMSDFIFKKEQFVSNLDPRNRSEVGIGEEKEQCDEMVVKVVRRKSNKQILFIEAEEDFADFVFSFLTFPLGGVLHMLEGFSSISCIDNLYKSVTELSSEKCLRSQYFKNLLTNPSISMQSELRNQILPIPYNNYKEENISYKFVDPKSPISGGYARAPLTFMVTDDLVVTPMSSIDGILYIERMKVPLNDVEEMVINIGQKEGLGILKASLTSTSALTNGLNQYIGSEKPKVEK