AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene84626

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene84626.t1 MTR_7g066490 86.758 438 31 3 1 433 1 416 0.0 746
MS.gene84626.t1 MTR_7g066480 83.371 439 58 3 1 433 1 430 0.0 718
MS.gene84626.t1 MTR_7g066260 41.631 466 203 11 15 426 14 464 8.75e-94 291
MS.gene84626.t1 MTR_7g066350 43.709 453 195 14 15 421 8 446 1.57e-93 290
MS.gene84626.t1 MTR_7g066340 41.991 462 201 14 15 426 11 455 1.38e-91 285
MS.gene84626.t1 MTR_7g066570 38.980 490 201 10 15 426 13 482 1.34e-88 280
MS.gene84626.t1 MTR_7g066410 46.045 354 145 8 17 335 11 353 9.83e-87 274
MS.gene84626.t1 MTR_7g066410 62.651 83 31 0 343 425 431 513 3.34e-23 102
MS.gene84626.t1 MTR_7g066360 40.576 451 215 11 17 427 15 452 1.06e-86 273
MS.gene84626.t1 MTR_7g066290 41.419 437 214 12 15 425 14 434 1.07e-84 266
MS.gene84626.t1 MTR_7g062300 36.820 478 209 11 17 421 13 470 1.60e-83 264
MS.gene84626.t1 MTR_7g066430 46.705 349 154 9 14 345 2 335 3.60e-83 264
MS.gene84626.t1 MTR_7g066430 65.333 75 26 0 350 424 411 485 1.47e-21 97.4
MS.gene84626.t1 MTR_7g012680 39.355 465 199 10 15 426 13 447 1.08e-81 259
MS.gene84626.t1 MTR_1g041315 37.445 454 209 10 15 408 13 451 9.75e-80 255
MS.gene84626.t1 MTR_7g066310 37.584 447 177 11 15 426 6 385 1.32e-76 244
MS.gene84626.t1 MTR_3g007740 37.310 461 212 11 16 425 9 443 4.55e-75 241
MS.gene84626.t1 MTR_7g063920 35.394 469 192 8 17 424 12 430 4.71e-74 238
MS.gene84626.t1 MTR_7g062280 42.442 344 154 8 17 335 11 335 4.47e-73 238
MS.gene84626.t1 MTR_7g062280 41.121 107 58 2 319 425 385 486 5.98e-14 73.9
MS.gene84626.t1 MTR_7g063830 37.802 455 216 14 17 428 11 441 1.84e-71 232
MS.gene84626.t1 MTR_7g063840 34.864 479 221 10 17 425 11 468 2.87e-71 232
MS.gene84626.t1 MTR_7g066400 36.404 456 205 12 16 420 12 433 5.99e-71 231
MS.gene84626.t1 MTR_7g063900 41.566 332 166 7 16 337 10 323 1.28e-69 228
MS.gene84626.t1 MTR_7g058700 36.782 435 185 10 28 420 531 917 8.10e-69 235
MS.gene84626.t1 MTR_7g063660 35.124 484 220 14 16 425 9 472 9.05e-69 226
MS.gene84626.t1 MTR_7g063880 36.531 490 206 15 16 431 11 469 1.23e-66 220
MS.gene84626.t1 MTR_7g063670 35.135 481 218 13 11 430 9 456 1.75e-66 219
MS.gene84626.t1 MTR_7g058710 34.343 495 212 14 15 424 11 477 1.21e-64 215
MS.gene84626.t1 MTR_7g063890 39.412 340 170 7 16 345 27 340 1.24e-59 202
MS.gene84626.t1 MTR_7g063820 40.719 334 164 10 17 336 11 324 8.01e-59 200
MS.gene84626.t1 MTR_7g066580 39.286 336 149 8 22 345 1 293 3.37e-57 195
MS.gene84626.t1 MTR_7g066580 54.688 64 29 0 355 418 376 439 4.50e-13 71.2
MS.gene84626.t1 MTR_7g066280 30.660 424 170 14 95 426 1 392 6.80e-41 150
MS.gene84626.t1 MTR_4g019340 30.271 479 235 14 17 412 39 501 1.47e-40 151
MS.gene84626.t1 MTR_2g029400 34.835 333 128 10 15 336 13 267 5.58e-40 148
MS.gene84626.t1 MTR_2g029400 27.907 172 105 4 264 418 14 183 3.50e-12 68.2
MS.gene84626.t1 MTR_2g029400 53.226 62 29 0 352 413 343 404 4.00e-11 65.1
MS.gene84626.t1 MTR_1g014060 44.393 214 102 5 25 225 9 218 8.48e-40 147
MS.gene84626.t1 MTR_1g014060 37.853 177 64 4 296 426 210 386 4.75e-22 97.8
MS.gene84626.t1 MTR_4g019310 32.571 350 182 9 16 334 8 334 4.42e-39 147
MS.gene84626.t1 MTR_4g019310 56.522 69 29 1 353 420 418 486 2.22e-14 75.5
MS.gene84626.t1 MTR_4g017410 27.833 503 248 14 14 425 7 485 3.32e-38 145
MS.gene84626.t1 MTR_3g065200 31.366 322 157 7 15 331 2 264 2.66e-34 133
MS.gene84626.t1 MTR_4g017830 31.405 363 211 13 17 357 13 359 3.86e-33 131
MS.gene84626.t1 MTR_7g062270 43.529 170 86 4 17 178 11 178 4.37e-33 129
MS.gene84626.t1 MTR_7g063720 36.530 219 87 5 256 427 15 228 1.28e-32 124
MS.gene84626.t1 MTR_4g017470 30.168 358 170 9 17 348 13 316 1.26e-31 126
MS.gene84626.t1 MTR_4g017440 29.396 364 209 9 14 348 12 356 4.52e-31 125
MS.gene84626.t1 MTR_4g017610 31.454 337 193 13 14 328 11 331 5.12e-28 115
MS.gene84626.t1 MTR_8g023240 29.290 338 192 12 8 327 25 333 1.69e-25 109
MS.gene84626.t1 MTR_7g063690 30.877 285 114 9 17 293 13 222 2.15e-23 98.6
MS.gene84626.t1 MTR_7g066390 45.600 125 62 2 307 426 1 124 1.49e-21 91.3
MS.gene84626.t1 MTR_8g445860 31.967 244 137 8 7 230 4 238 1.48e-18 85.1
MS.gene84626.t1 MTR_2g067310 38.961 154 59 7 27 179 58 177 1.11e-17 82.4
MS.gene84626.t1 MTR_4g017550 27.811 338 178 15 30 330 3 311 3.39e-16 80.9
MS.gene84626.t1 MTR_0150s0010 30.417 240 133 8 14 229 8 237 1.95e-15 75.9
MS.gene84626.t1 MTR_1g115440 30.380 237 135 7 15 229 10 238 2.57e-15 75.5
MS.gene84626.t1 MTR_7g066680 38.760 129 69 3 208 336 38 156 5.78e-15 76.3
MS.gene84626.t1 MTR_7g066680 42.000 100 27 2 352 420 235 334 3.09e-12 67.8
MS.gene84626.t1 MTR_4g019330 34.868 152 83 4 280 420 32 178 7.85e-15 73.2
MS.gene84626.t1 MTR_4g019240 30.178 169 97 4 258 424 5 154 4.40e-13 67.8
MS.gene84626.t1 MTR_7g063850 39.326 89 54 0 345 433 203 291 5.49e-13 69.7
MS.gene84626.t1 MTR_7g063850 48.529 68 30 1 269 336 69 131 7.82e-11 63.2
MS.gene84626.t1 MTR_7g063760 43.056 72 40 1 360 430 2 73 1.49e-12 63.2
MS.gene84626.t1 MTR_1g115450 43.023 86 44 1 14 99 5 85 4.32e-12 63.9
MS.gene84626.t1 MTR_1g115455 27.801 241 136 9 14 230 7 233 1.96e-11 64.3
MS.gene84626.t1 MTR_7g100420 47.059 68 32 1 17 80 40 107 9.39e-11 63.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene84626.t1 AT3G09140 30.417 503 252 11 14 429 7 498 3.69e-49 175
MS.gene84626.t1 AT3G09140 29.567 531 248 13 14 429 7 526 6.41e-48 172
MS.gene84626.t1 AT5G01130 31.347 453 242 13 16 420 9 440 2.06e-44 161
MS.gene84626.t1 AT3G09110 31.464 321 200 4 16 327 9 318 2.92e-41 150
MS.gene84626.t1 AT5G01140 26.543 486 249 12 16 430 9 457 1.64e-38 145
MS.gene84626.t1 AT5G01120 27.362 508 256 12 17 433 10 495 8.07e-38 144
MS.gene84626.t1 AT5G01150 31.045 335 193 7 16 329 9 326 2.90e-37 142
MS.gene84626.t1 AT5G43240 31.880 367 217 9 17 361 10 365 3.43e-34 134
MS.gene84626.t1 AT5G43240 31.880 367 217 9 17 361 10 365 3.43e-34 134
MS.gene84626.t1 AT5G43240 31.880 367 217 9 17 361 10 365 3.43e-34 134
MS.gene84626.t1 AT5G37320 27.551 490 255 16 17 425 10 480 5.43e-34 133
MS.gene84626.t1 AT3G09120 29.794 339 183 10 11 320 1 313 6.70e-33 126

Find 67 sgRNAs with CRISPR-Local

Find 338 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CAAAGTTTCTGTGAGAATTT+TGG 0.198652 7.3:-38671121 MS.gene84626:CDS
CATTCTCCATGTTAGATTCT+TGG 0.214274 7.3:+38670989 None:intergenic
GAGAATTCCTCTCTCTGATT+TGG 0.271322 7.3:-38667348 MS.gene84626:CDS
CAACAAAATATTGTATGTTA+TGG 0.288927 7.3:-38667666 MS.gene84626:CDS
GTTCAAGAGCATGGTTGATT+TGG 0.298890 7.3:-38667537 MS.gene84626:CDS
CAGAGGTGTCGCCGAGAATA+AGG 0.313059 7.3:+38670280 None:intergenic
TCAGAAAGTTGAGAATTATC+AGG 0.324294 7.3:+38670637 None:intergenic
CAAGAGTCCTTCAACATATA+TGG 0.334427 7.3:-38667435 MS.gene84626:CDS
GCCGGAACAAAACCATTCTT+AGG 0.339193 7.3:+38670700 None:intergenic
TTGTCCTCGGTTGCAAGAAA+TGG 0.341337 7.3:+38666768 None:intergenic
GGAGTTGAGAACATGTTAAA+TGG 0.344732 7.3:-38667590 MS.gene84626:CDS
TATCGGTCCATCGAATTAAT+TGG 0.350877 7.3:+38670871 None:intergenic
AATTCTCACAGAAACTTTGT+TGG 0.354382 7.3:+38671125 None:intergenic
TCCAATACATTAACAGGTCT+TGG 0.355107 7.3:+38670218 None:intergenic
CCAATATCCAATACATTAAC+AGG 0.365033 7.3:+38670212 None:intergenic
AGTTTCTTAACTTTGCCATT+AGG 0.370562 7.3:-38671033 MS.gene84626:CDS
ATTTCTCTACTTAAGTATCT+TGG 0.374982 7.3:-38670607 MS.gene84626:CDS
AACAAAATATTGTATGTTAT+GGG 0.397927 7.3:-38667665 MS.gene84626:CDS
TCCAAGACCTGTTAATGTAT+TGG 0.419236 7.3:-38670219 MS.gene84626:CDS
ATAAGAAAAGTTGCTGTTGC+CGG 0.427107 7.3:+38670682 None:intergenic
TCAGCTCTCACTGATGGTCT+TGG 0.430495 7.3:-38666792 MS.gene84626:CDS
CCTGTTAATGTATTGGATAT+TGG 0.430788 7.3:-38670212 MS.gene84626:CDS
AGTGAAGTGCTCCTTATTCT+CGG 0.436480 7.3:-38670291 MS.gene84626:CDS
CTCACAGAAACTTTGTTGGA+TGG 0.453943 7.3:+38671129 None:intergenic
AGTCTTGCAATGGTGCCTAA+TGG 0.460125 7.3:+38671018 None:intergenic
GAAGAAAGAATGATTAGCAT+TGG 0.463579 7.3:-38667326 MS.gene84626:CDS
GTTAAACACCATCCTAAGAA+TGG 0.463782 7.3:-38670712 MS.gene84626:CDS
TCTGTTACCATATATGTTGA+AGG 0.472437 7.3:+38667428 None:intergenic
TCACAGAAACTTTGTTGGAT+GGG 0.480522 7.3:+38671130 None:intergenic
CACTTGCAATTTCGCTTCGT+AGG 0.480527 7.3:+38670766 None:intergenic
AAAGGAAATCGCATCGGTTG+AGG 0.483342 7.3:+38667382 None:intergenic
GGTTCGACCAATTAATTCGA+TGG 0.505995 7.3:-38670878 MS.gene84626:CDS
ATCGCATCGGTTGAGGAACC+TGG 0.506090 7.3:+38667389 None:intergenic
AACATGTTAAATGGAAACTC+TGG 0.509933 7.3:-38667581 MS.gene84626:CDS
ACTTGCAATTTCGCTTCGTA+GGG 0.517514 7.3:+38670767 None:intergenic
GAAGGGCACTCTAGAGGTAA+AGG 0.529307 7.3:-38667708 MS.gene84626:CDS
AAATTGAGGTCTTTCAATTG+TGG 0.530641 7.3:-38670811 MS.gene84626:CDS
TTTATTTGTTCAAGCAGGGA+AGG 0.539556 7.3:-38671076 MS.gene84626:CDS
CTTTCTTCCAAATCAGAGAG+AGG 0.543946 7.3:+38667341 None:intergenic
TTGGATATTGGTGGTAACAT+TGG 0.551335 7.3:-38670200 MS.gene84626:CDS
TCATCATCAGCTCTCACTGA+TGG 0.552403 7.3:-38666798 MS.gene84626:CDS
ATTGTATGTTATGGGTGAAG+AGG 0.557765 7.3:-38667657 MS.gene84626:CDS
AGATAATCTGTTCAAGAGCA+TGG 0.561182 7.3:-38667546 MS.gene84626:CDS
GATTAGCATTGGTAATAAAG+AGG 0.562303 7.3:-38667315 MS.gene84626:intron
TTGGCTCACAAGTCTTGCAA+TGG 0.571997 7.3:+38671008 None:intergenic
TAGGGTTATCGATGCACACT+TGG 0.572247 7.3:+38670785 None:intergenic
TACAGGAGCACAACTTGTGA+AGG 0.575627 7.3:-38667726 MS.gene84626:intron
AACATGGAGAATGTTCGTGT+TGG 0.583874 7.3:-38670979 MS.gene84626:CDS
TGGTCCATTTCTTGCAACCG+AGG 0.584203 7.3:-38666772 MS.gene84626:CDS
CTCTGACAGACGTATTCTTG+TGG 0.585914 7.3:-38670262 MS.gene84626:CDS
GAACAAAACCATTCTTAGGA+TGG 0.587566 7.3:+38670704 None:intergenic
AGTCAGAAAGGAAATCGCAT+CGG 0.594398 7.3:+38667376 None:intergenic
CACAAGAATACGTCTGTCAG+AGG 0.603852 7.3:+38670263 None:intergenic
GTTAATGTATTGGATATTGG+TGG 0.611646 7.3:-38670209 MS.gene84626:CDS
GTTACGTAGGAAAGTAGCCA+TGG 0.616515 7.3:+38671167 None:intergenic
ACTTGTGAAGGGCACTCTAG+AGG 0.628990 7.3:-38667714 MS.gene84626:CDS
TGTTCTCAACTCCTCCCAGA+GGG 0.632971 7.3:+38667600 None:intergenic
AAGCTTGTTATACGAAAGTG+TGG 0.633562 7.3:-38670950 MS.gene84626:CDS
CTAAGCAATTCAAGTTACGT+AGG 0.633894 7.3:+38671154 None:intergenic
GAAAAGAACCTCGTTATGTG+TGG 0.644069 7.3:-38670734 MS.gene84626:CDS
TACTATCAAGATAGTGACCG+TGG 0.646178 7.3:-38670569 MS.gene84626:CDS
GATGACTTAGTTATCACACC+AGG 0.650126 7.3:-38667407 MS.gene84626:CDS
ACAGGAGCACAACTTGTGAA+GGG 0.654365 7.3:-38667725 MS.gene84626:intron
CTCCTTACGAGTGACATCCA+CGG 0.666218 7.3:+38670552 None:intergenic
GTGTTTAACCACACATAACG+AGG 0.669189 7.3:+38670726 None:intergenic
TGTGAGCCAAGAATCTAACA+TGG 0.669681 7.3:-38670995 MS.gene84626:CDS
ATGTTCTCAACTCCTCCCAG+AGG 0.745049 7.3:+38667599 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAAAAATACTTATATTGA+AGG + chr7.3:38670903-38670922 None:intergenic 10.0%
!! AAAAAAATACTTATATTGAA+GGG + chr7.3:38670902-38670921 None:intergenic 10.0%
!! GTTCAAAAAAAAAAAAAAAT+AGG + chr7.3:38668142-38668161 None:intergenic 10.0%
!! TCATAATAATAAATAATCTA+AGG + chr7.3:38670865-38670884 None:intergenic 10.0%
!! TTACTTTATATTCTTAATTA+GGG - chr7.3:38669348-38669367 MS.gene84626:intron 10.0%
!! TTTACTTTATATTCTTAATT+AGG - chr7.3:38669347-38669366 MS.gene84626:intron 10.0%
!!! ATAAAAAAAAATCAGAATTT+TGG + chr7.3:38669972-38669991 None:intergenic 10.0%
!!! GTGTAATTTTTTTTTTTTTT+TGG - chr7.3:38671058-38671077 MS.gene84626:CDS 10.0%
!!! TTTTTTTTTATTTGATGTTT+AGG - chr7.3:38669981-38670000 MS.gene84626:intron 10.0%
!! AAAAAATACTTATATTGAAG+GGG + chr7.3:38670901-38670920 None:intergenic 15.0%
!! AAAATAGGAATAATTAATTG+AGG + chr7.3:38668127-38668146 None:intergenic 15.0%
!! AAATAAATGTTGGAATATTA+GGG + chr7.3:38669526-38669545 None:intergenic 15.0%
!! AAATACTATTACAAAGATTT+AGG - chr7.3:38668762-38668781 MS.gene84626:intron 15.0%
!! AACAAAATATTGTATGTTAT+GGG - chr7.3:38670252-38670271 MS.gene84626:CDS 15.0%
!! AATAAATCTTCAAAAAAGAA+GGG + chr7.3:38668624-38668643 None:intergenic 15.0%
!! AATGTATAAGAACATATTAA+CGG + chr7.3:38669329-38669348 None:intergenic 15.0%
!! ATAAATTTGAACAAAAATTG+TGG + chr7.3:38667531-38667550 None:intergenic 15.0%
!! ATAATAAATAATCTAAGGAA+CGG + chr7.3:38670860-38670879 None:intergenic 15.0%
!! GTTAATGTTAAAAGATAAAT+GGG + chr7.3:38669594-38669613 None:intergenic 15.0%
!! TGTTAATGTTAAAAGATAAA+TGG + chr7.3:38669595-38669614 None:intergenic 15.0%
!! TTAATTAAAGTAAATAACTG+TGG - chr7.3:38670152-38670171 MS.gene84626:intron 15.0%
!!! GAAGAGTATTTTATTTAAAA+CGG - chr7.3:38668166-38668185 MS.gene84626:intron 15.0%
!!! GTTTTAAATAAAATACTCTT+CGG + chr7.3:38668167-38668186 None:intergenic 15.0%
!!! TAAAACATAAAAGTATACAT+AGG - chr7.3:38669726-38669745 MS.gene84626:intron 15.0%
!! AACCTAAATGAAATAAATGT+TGG + chr7.3:38669536-38669555 None:intergenic 20.0%
!! CAACAAAATATTGTATGTTA+TGG - chr7.3:38670251-38670270 MS.gene84626:CDS 20.0%
!! GAAATAAATGTTGGAATATT+AGG + chr7.3:38669527-38669546 None:intergenic 20.0%
!! GAATAAATCTTCAAAAAAGA+AGG + chr7.3:38668625-38668644 None:intergenic 20.0%
!! TAATAAATAATCTAAGGAAC+GGG + chr7.3:38670859-38670878 None:intergenic 20.0%
!! TTCCAACATTTATTTCATTT+AGG - chr7.3:38669531-38669550 MS.gene84626:intron 20.0%
!!! AAATTGTAAAGTGTTAGAAA+TGG + chr7.3:38668969-38668988 None:intergenic 20.0%
!!! AACATACAATATTTTGTTGT+TGG + chr7.3:38670250-38670269 None:intergenic 20.0%
!!! AATTGTAAAGTGTTAGAAAT+GGG + chr7.3:38668968-38668987 None:intergenic 20.0%
!!! ACATATCATGACATTTTAAA+AGG - chr7.3:38667966-38667985 MS.gene84626:intron 20.0%
!!! AGCTTTTGAAAAAGAATTAT+TGG - chr7.3:38667018-38667037 MS.gene84626:intron 20.0%
!!! ATGGAACTTTTAAATTGTTA+GGG + chr7.3:38668499-38668518 None:intergenic 20.0%
!!! GTTTTAGATATTTGCAATAT+CGG + chr7.3:38667066-38667085 None:intergenic 20.0%
!!! TATAAGGTATTAAGTATATG+AGG + chr7.3:38669383-38669402 None:intergenic 20.0%
!!! TATGGAACTTTTAAATTGTT+AGG + chr7.3:38668500-38668519 None:intergenic 20.0%
!!! TTATAGTAATTCGGATTTTA+TGG - chr7.3:38668721-38668740 MS.gene84626:intron 20.0%
!!! TTTAAAATGTCATGATATGT+TGG + chr7.3:38667966-38667985 None:intergenic 20.0%
!!! TTTATGTTTTATGCTTTCTT+AGG + chr7.3:38669717-38669736 None:intergenic 20.0%
!!! TTTTGAAGATTTATTCTAGT+GGG - chr7.3:38668629-38668648 MS.gene84626:intron 20.0%
!!! TTTTTGAAGATTTATTCTAG+TGG - chr7.3:38668628-38668647 MS.gene84626:intron 20.0%
!!! TTTTTGGTTACAAAAAGTTT+AGG - chr7.3:38670690-38670709 MS.gene84626:CDS 20.0%
!!! TTTTTTTTTTTTGGAATTGC+AGG - chr7.3:38671067-38671086 MS.gene84626:CDS 20.0%
! AATTATGTGACTATGGTTTA+GGG - chr7.3:38669884-38669903 MS.gene84626:intron 25.0%
! AATTGTGAATTATGTGACTA+TGG - chr7.3:38669877-38669896 MS.gene84626:intron 25.0%
! AGGGATTTGATAAATTAGTA+AGG + chr7.3:38670042-38670061 None:intergenic 25.0%
! ATGACTTTGCAGAAAAATTA+TGG + chr7.3:38669770-38669789 None:intergenic 25.0%
! ATTTCTCTACTTAAGTATCT+TGG - chr7.3:38667310-38667329 MS.gene84626:intron 25.0%
! CTGAACGTTAAAACAATAAA+AGG - chr7.3:38667885-38667904 MS.gene84626:intron 25.0%
! CTTAGACAAAAAATCTGATT+TGG + chr7.3:38670427-38670446 None:intergenic 25.0%
! GAATAATTAATTGAGGATTG+TGG + chr7.3:38668120-38668139 None:intergenic 25.0%
! GATCATTTATTTACAACGTT+TGG + chr7.3:38668542-38668561 None:intergenic 25.0%
! GGGATTTGATAAATTAGTAA+GGG + chr7.3:38670041-38670060 None:intergenic 25.0%
! GTCAAAACGATTAAACTATA+AGG + chr7.3:38669399-38669418 None:intergenic 25.0%
! GTGAACAATTTGATACATTT+GGG + chr7.3:38669805-38669824 None:intergenic 25.0%
! TAAATTAGTAAGGGCAAAAA+TGG + chr7.3:38670032-38670051 None:intergenic 25.0%
! TATATAATTCTCAACACTCT+CGG - chr7.3:38667429-38667448 MS.gene84626:CDS 25.0%
! TGAACAATTTGATACATTTG+GGG + chr7.3:38669804-38669823 None:intergenic 25.0%
! TGTGAACAATTTGATACATT+TGG + chr7.3:38669806-38669825 None:intergenic 25.0%
! TTATTATTAACTCCCATAAG+TGG - chr7.3:38669430-38669449 MS.gene84626:intron 25.0%
! TTTAACATTAACACCATACT+TGG - chr7.3:38669602-38669621 MS.gene84626:intron 25.0%
!! AACTTTTAAATTGTTAGGGA+TGG + chr7.3:38668495-38668514 None:intergenic 25.0%
!! ATTGTAAAGTGTTAGAAATG+GGG + chr7.3:38668967-38668986 None:intergenic 25.0%
!! CAAGTCAAATCTAATTTTGA+TGG - chr7.3:38670447-38670466 MS.gene84626:intron 25.0%
!! CGAATTACTATAAAAAGTGT+GGG + chr7.3:38668714-38668733 None:intergenic 25.0%
!! TAATTTTTCTGCAAAGTCAT+CGG - chr7.3:38669770-38669789 MS.gene84626:intron 25.0%
!! TTTAGAGTTGTTCTTTACAA+AGG + chr7.3:38667562-38667581 None:intergenic 25.0%
!! TTTCTAGACTTAGATTTTTC+AGG + chr7.3:38668230-38668249 None:intergenic 25.0%
!!! AAAGTTTTATTTGTTCAAGC+AGG - chr7.3:38666836-38666855 MS.gene84626:intron 25.0%
!!! AAATAACTGTGGCAATTTTT+TGG - chr7.3:38670163-38670182 MS.gene84626:intron 25.0%
!!! AAGTTTTATTTGTTCAAGCA+GGG - chr7.3:38666837-38666856 MS.gene84626:intron 25.0%
!!! AATAACTGTGGCAATTTTTT+GGG - chr7.3:38670164-38670183 MS.gene84626:intron 25.0%
!!! AATTCTCATTTTAGTCAGAA+AGG + chr7.3:38670556-38670575 None:intergenic 25.0%
!!! ACATCTCATTTTGAAATAAG+AGG - chr7.3:38667747-38667766 MS.gene84626:intron 25.0%
!!! AGATTTTTCAGGATTTTTTG+TGG + chr7.3:38668219-38668238 None:intergenic 25.0%
!!! ATAGTTTAATCGTTTTGACA+AGG - chr7.3:38669400-38669419 MS.gene84626:intron 25.0%
!!! ATCTGAAATTCTTTTTGTCA+AGG + chr7.3:38666997-38667016 None:intergenic 25.0%
!!! ATGGAATTGAAACACTTTTT+TGG + chr7.3:38669063-38669082 None:intergenic 25.0%
!!! CCACACTTTTTATAGTAATT+CGG - chr7.3:38668712-38668731 MS.gene84626:intron 25.0%
!!! CTTTTATTGTTTTAACGTTC+AGG + chr7.3:38667887-38667906 None:intergenic 25.0%
AAATTGAGGTCTTTCAATTG+TGG - chr7.3:38667106-38667125 MS.gene84626:intron 30.0%
AACATGTTAAATGGAAACTC+TGG - chr7.3:38670336-38670355 MS.gene84626:intron 30.0%
AAGTTATGCTCTTTCAAAAG+TGG + chr7.3:38668690-38668709 None:intergenic 30.0%
AATCAATATCATACTTCTCG+TGG + chr7.3:38668074-38668093 None:intergenic 30.0%
AATTCTCACAGAAACTTTGT+TGG + chr7.3:38666795-38666814 None:intergenic 30.0%
ACATAATTCACAATTTGCGT+TGG + chr7.3:38669872-38669891 None:intergenic 30.0%
ACATGTACTTGTCAATAACT+AGG + chr7.3:38671031-38671050 None:intergenic 30.0%
AGTTTCTTAACTTTGCCATT+AGG - chr7.3:38666884-38666903 MS.gene84626:intron 30.0%
ATACAATGCTTTAGCGAATT+TGG + chr7.3:38668376-38668395 None:intergenic 30.0%
ATCTTAGAAAGCAACATCAT+AGG + chr7.3:38670062-38670081 None:intergenic 30.0%
CATGTACTTGTCAATAACTA+GGG + chr7.3:38671030-38671049 None:intergenic 30.0%
CATTCATAACAAAAACATGG+AGG - chr7.3:38668304-38668323 MS.gene84626:intron 30.0%
CCAATATCCAATACATTAAC+AGG + chr7.3:38667708-38667727 None:intergenic 30.0%
CCGAATTACTATAAAAAGTG+TGG + chr7.3:38668715-38668734 None:intergenic 30.0%
CCTGTTAATGTATTGGATAT+TGG - chr7.3:38667705-38667724 MS.gene84626:CDS 30.0%
CGCTATATTGTATTCAAAAC+AGG + chr7.3:38668273-38668292 None:intergenic 30.0%
CTTTAATTAAAGTGAGCTAG+AGG + chr7.3:38670142-38670161 None:intergenic 30.0%
GAACAATTTGATACATTTGG+GGG + chr7.3:38669803-38669822 None:intergenic 30.0%
GAAGAAAGAATGATTAGCAT+TGG - chr7.3:38670591-38670610 MS.gene84626:CDS 30.0%
GAATTATGTGACTATGGTTT+AGG - chr7.3:38669883-38669902 MS.gene84626:intron 30.0%
GTTAATGTATTGGATATTGG+TGG - chr7.3:38667708-38667727 MS.gene84626:CDS 30.0%
TCAGAAAGTTGAGAATTATC+AGG + chr7.3:38667283-38667302 None:intergenic 30.0%
TCTGTTACCATATATGTTGA+AGG + chr7.3:38670492-38670511 None:intergenic 30.0%
TCTTAGAAAGCAACATCATA+GGG + chr7.3:38670061-38670080 None:intergenic 30.0%
TGCCATTCATAACAAAAACA+TGG - chr7.3:38668301-38668320 MS.gene84626:intron 30.0%
TGGTTACAAAAAGTTTAGGT+GGG - chr7.3:38670694-38670713 MS.gene84626:CDS 30.0%
TTGGTTACAAAAAGTTTAGG+TGG - chr7.3:38670693-38670712 MS.gene84626:CDS 30.0%
TTGTGGTCTGTAAGAAAATA+GGG + chr7.3:38669087-38669106 None:intergenic 30.0%
TTTCTATCATGTTCCAAGTA+TGG + chr7.3:38669618-38669637 None:intergenic 30.0%
TTTGTGGTCTGTAAGAAAAT+AGG + chr7.3:38669088-38669107 None:intergenic 30.0%
! AACTCTAAAGAGTATGACAT+TGG - chr7.3:38667573-38667592 MS.gene84626:CDS 30.0%
! ACTGAAACATATGTCTCTTT+TGG + chr7.3:38669296-38669315 None:intergenic 30.0%
! CAAAGTTTCTGTGAGAATTT+TGG - chr7.3:38666796-38666815 MS.gene84626:CDS 30.0%
! GAAATTCTTTTTGTCAAGGT+TGG + chr7.3:38666993-38667012 None:intergenic 30.0%
! TATGTCAATGGCTTTTAATC+CGG + chr7.3:38669203-38669222 None:intergenic 30.0%
! TCCTATTAGTCTAGGAAAAT+AGG - chr7.3:38669003-38669022 MS.gene84626:intron 30.0%
! TCCTATTTTCCTAGACTAAT+AGG + chr7.3:38669007-38669026 None:intergenic 30.0%
! TGTTTTCCTTTTCTCAATTG+TGG - chr7.3:38667774-38667793 MS.gene84626:intron 30.0%
! TTGATGACACAGAAAAATTG+AGG - chr7.3:38667092-38667111 MS.gene84626:intron 30.0%
!! CTCCATGTTTTTGTTATGAA+TGG + chr7.3:38668306-38668325 None:intergenic 30.0%
!! GAATTTTGGTAGATGAAATG+AGG - chr7.3:38666810-38666829 MS.gene84626:CDS 30.0%
!! GATTAGCATTGGTAATAAAG+AGG - chr7.3:38670602-38670621 MS.gene84626:CDS 30.0%
!! TGATGTTGCTTTCTAAGATT+AGG - chr7.3:38670063-38670082 MS.gene84626:intron 30.0%
!!! AATTTTTTGAGATTCCCTCT+GGG - chr7.3:38670303-38670322 MS.gene84626:intron 30.0%
!!! CACTTTTTTGGCATGATAAT+TGG + chr7.3:38669051-38669070 None:intergenic 30.0%
!!! TTTGGTTTTGGAGGTTAAAA+TGG + chr7.3:38668928-38668947 None:intergenic 30.0%
AACGTTAGGGAGAATTGAAA+TGG - chr7.3:38669931-38669950 MS.gene84626:intron 35.0%
AAGTGTTAGAAATGGGGATT+TGG + chr7.3:38668961-38668980 None:intergenic 35.0%
AATGCTTTAGCGAATTTGGA+AGG + chr7.3:38668372-38668391 None:intergenic 35.0%
ACGTTAGGGAGAATTGAAAT+GGG - chr7.3:38669932-38669951 MS.gene84626:intron 35.0%
AGATAATCTGTTCAAGAGCA+TGG - chr7.3:38670371-38670390 MS.gene84626:intron 35.0%
AGATATTCTCGTCATTGAAG+GGG + chr7.3:38668436-38668455 None:intergenic 35.0%
AGATTAGGCCTAAGGAAATA+TGG - chr7.3:38670078-38670097 MS.gene84626:intron 35.0%
AGCAAAGTATGGTATGTCAA+TGG + chr7.3:38669215-38669234 None:intergenic 35.0%
AGGATTCCACAATTGAGAAA+AGG + chr7.3:38667783-38667802 None:intergenic 35.0%
AGGTGGCAATTATTGATCAA+TGG + chr7.3:38669265-38669284 None:intergenic 35.0%
AGTGTTAGAAATGGGGATTT+GGG + chr7.3:38668960-38668979 None:intergenic 35.0%
ATCAAATTGTTCACATGTCG+CGG - chr7.3:38669811-38669830 MS.gene84626:intron 35.0%
ATTGTATGTTATGGGTGAAG+AGG - chr7.3:38670260-38670279 MS.gene84626:CDS 35.0%
CAAGAGTCCTTCAACATATA+TGG - chr7.3:38670482-38670501 MS.gene84626:intron 35.0%
CATTCTCCATGTTAGATTCT+TGG + chr7.3:38666931-38666950 None:intergenic 35.0%
CTAGGAAAATAGGAACTAAG+AGG - chr7.3:38669013-38669032 MS.gene84626:intron 35.0%
CTTCAAAAAAGAAGGGTCAT+AGG + chr7.3:38668617-38668636 None:intergenic 35.0%
GAACAAAACCATTCTTAGGA+TGG + chr7.3:38667216-38667235 None:intergenic 35.0%
GAGAAGGTCATTATTTGCTT+GGG + chr7.3:38668906-38668925 None:intergenic 35.0%
GAGATATTCTCGTCATTGAA+GGG + chr7.3:38668437-38668456 None:intergenic 35.0%
GGAGTTGAGAACATGTTAAA+TGG - chr7.3:38670327-38670346 MS.gene84626:intron 35.0%
GTCTGTAAGAAAATAGGGAA+TGG + chr7.3:38669082-38669101 None:intergenic 35.0%
GTTAAACACCATCCTAAGAA+TGG - chr7.3:38667205-38667224 MS.gene84626:intron 35.0%
TAACTTGAAACACCTCTCAT+CGG - chr7.3:38668820-38668839 MS.gene84626:intron 35.0%
TAAGGGCAAAAATGGTAACT+TGG + chr7.3:38670024-38670043 None:intergenic 35.0%
TATCGGTCCATCGAATTAAT+TGG + chr7.3:38667049-38667068 None:intergenic 35.0%
TCACAGAAACTTTGTTGGAT+GGG + chr7.3:38666790-38666809 None:intergenic 35.0%
TCCAAGACCTGTTAATGTAT+TGG - chr7.3:38667698-38667717 MS.gene84626:CDS 35.0%
TCCAATACATTAACAGGTCT+TGG + chr7.3:38667702-38667721 None:intergenic 35.0%
TCCTAGACTAATAGGAATCT+CGG + chr7.3:38668999-38669018 None:intergenic 35.0%
TGATATGTTGGATTACAGTC+AGG + chr7.3:38667954-38667973 None:intergenic 35.0%
TTCAAGATGAATCATTGTGG+TGG + chr7.3:38669159-38669178 None:intergenic 35.0%
TTGTTATGAATGGCATGCTA+TGG + chr7.3:38668296-38668315 None:intergenic 35.0%
TTTATTTGTTCAAGCAGGGA+AGG - chr7.3:38666841-38666860 MS.gene84626:intron 35.0%
TTTGCAAGTGGTATTTGGTA+TGG + chr7.3:38668518-38668537 None:intergenic 35.0%
TTTGGAGGTTAAAATGGAGA+AGG + chr7.3:38668922-38668941 None:intergenic 35.0%
! ACAAAAAGTTTAGGTGGGTT+CGG - chr7.3:38670699-38670718 MS.gene84626:CDS 35.0%
! ATAAGAAAAGTTGCTGTTGC+CGG + chr7.3:38667238-38667257 None:intergenic 35.0%
! ATATGTCTCTTTTGGCAAAG+TGG + chr7.3:38669288-38669307 None:intergenic 35.0%
! CTAAGCAATTCAAGTTACGT+AGG + chr7.3:38666766-38666785 None:intergenic 35.0%
! TTGGATATTGGTGGTAACAT+TGG - chr7.3:38667717-38667736 MS.gene84626:CDS 35.0%
! TTTTGGCATGATAATTGGTG+CGG + chr7.3:38669046-38669065 None:intergenic 35.0%
!! AAGCTTGTTATACGAAAGTG+TGG - chr7.3:38666967-38666986 MS.gene84626:intron 35.0%
!! ACAGGCATTGATTGTTGTAT+TGG + chr7.3:38668255-38668274 None:intergenic 35.0%
!! CAAAAGTGGTTGTTTTGTCT+TGG + chr7.3:38668676-38668695 None:intergenic 35.0%
!! CAGGCATTGATTGTTGTATT+GGG + chr7.3:38668254-38668273 None:intergenic 35.0%
!! GAAACTCTACAAGGTGTTTT+TGG + chr7.3:38668879-38668898 None:intergenic 35.0%
!! GTTTAATCGTTTTGACAAGG+TGG - chr7.3:38669403-38669422 MS.gene84626:intron 35.0%
!! GTTTGAGATTTTCTTGTCCT+CGG + chr7.3:38671165-38671184 None:intergenic 35.0%
!! TGTTTCAAGTTAGATCCACA+AGG + chr7.3:38668812-38668831 None:intergenic 35.0%
!! TTACATGGATTGATGACGAT+TGG + chr7.3:38669675-38669694 None:intergenic 35.0%
!!! ATGTAATGGGTTTGGGTTTT+AGG + chr7.3:38668343-38668362 None:intergenic 35.0%
!!! GAATTTTTTGAGATTCCCTC+TGG - chr7.3:38670302-38670321 MS.gene84626:intron 35.0%
!!! GTTTTTGGAGTTGGTTTACT+CGG + chr7.3:38668864-38668883 None:intergenic 35.0%
!!! TCCTAAGAATGGTTTTGTTC+CGG - chr7.3:38667216-38667235 MS.gene84626:intron 35.0%
AACATGGAGAATGTTCGTGT+TGG - chr7.3:38666938-38666957 MS.gene84626:intron 40.0%
AAGAGAGTGAGAGAACGTTA+GGG - chr7.3:38669918-38669937 MS.gene84626:intron 40.0%
AAGCCCAACCATATTTCCTT+AGG + chr7.3:38670089-38670108 None:intergenic 40.0%
AAGGTCATTATTTGCTTGGG+AGG + chr7.3:38668903-38668922 None:intergenic 40.0%
ACTTGCAATTTCGCTTCGTA+GGG + chr7.3:38667153-38667172 None:intergenic 40.0%
AGGCCTAAGGAAATATGGTT+GGG - chr7.3:38670083-38670102 MS.gene84626:intron 40.0%
AGTCAGAAAGGAAATCGCAT+CGG + chr7.3:38670544-38670563 None:intergenic 40.0%
ATAGGTGAAATAAGAGAGGC+GGG + chr7.3:38668599-38668618 None:intergenic 40.0%
ATGGAAAGTCCAACTGGAAA+AGG + chr7.3:38669246-38669265 None:intergenic 40.0%
ATGTTGGGACAACCACTTAT+GGG + chr7.3:38669445-38669464 None:intergenic 40.0%
CATAGGTGAAATAAGAGAGG+CGG + chr7.3:38668600-38668619 None:intergenic 40.0%
CCACTAGAACTAAGAACATC+CGG - chr7.3:38669181-38669200 MS.gene84626:intron 40.0%
CGTTAGGGAGAATTGAAATG+GGG - chr7.3:38669933-38669952 MS.gene84626:intron 40.0%
CTCACAGAAACTTTGTTGGA+TGG + chr7.3:38666791-38666810 None:intergenic 40.0%
CTTTCTTCCAAATCAGAGAG+AGG + chr7.3:38670579-38670598 None:intergenic 40.0%
GAAAAGAACCTCGTTATGTG+TGG - chr7.3:38667183-38667202 MS.gene84626:intron 40.0%
GAGAATTCCTCTCTCTGATT+TGG - chr7.3:38670569-38670588 MS.gene84626:CDS 40.0%
GATGACTTAGTTATCACACC+AGG - chr7.3:38670510-38670529 MS.gene84626:intron 40.0%
GGAGAAGGTCATTATTTGCT+TGG + chr7.3:38668907-38668926 None:intergenic 40.0%
GGAGATATTCTCGTCATTGA+AGG + chr7.3:38668438-38668457 None:intergenic 40.0%
GGCTTCAAGATGAATCATTG+TGG + chr7.3:38669162-38669181 None:intergenic 40.0%
GGTCATAGGTGAAATAAGAG+AGG + chr7.3:38668603-38668622 None:intergenic 40.0%
GGTTCGACCAATTAATTCGA+TGG - chr7.3:38667039-38667058 MS.gene84626:intron 40.0%
GTGTTTAACCACACATAACG+AGG + chr7.3:38667194-38667213 None:intergenic 40.0%
GTTAGGGAGAATTGAAATGG+GGG - chr7.3:38669934-38669953 MS.gene84626:intron 40.0%
TACCTCTATAAGTGCCCTTT+GGG + chr7.3:38670761-38670780 None:intergenic 40.0%
TACTATCAAGATAGTGACCG+TGG - chr7.3:38667348-38667367 MS.gene84626:CDS 40.0%
TACTCGGTTAGACTTTCTCA+TGG + chr7.3:38668848-38668867 None:intergenic 40.0%
TAGGCCTAAGGAAATATGGT+TGG - chr7.3:38670082-38670101 MS.gene84626:intron 40.0%
TATGTTGGGACAACCACTTA+TGG + chr7.3:38669446-38669465 None:intergenic 40.0%
TGATCAATGGAAAGTCCAAC+TGG + chr7.3:38669252-38669271 None:intergenic 40.0%
TGGAAAGTCCAACTGGAAAA+GGG + chr7.3:38669245-38669264 None:intergenic 40.0%
TGGAAGGCTAGGAATGTAAT+GGG + chr7.3:38668356-38668375 None:intergenic 40.0%
TGTGAGCCAAGAATCTAACA+TGG - chr7.3:38666922-38666941 MS.gene84626:intron 40.0%
TTGGAAGGCTAGGAATGTAA+TGG + chr7.3:38668357-38668376 None:intergenic 40.0%
TTTAGCGAATTTGGAAGGCT+AGG + chr7.3:38668367-38668386 None:intergenic 40.0%
TTTATGGCCTCACAAGATGA+GGG - chr7.3:38668737-38668756 MS.gene84626:intron 40.0%
! AGTGAAGTGCTCCTTATTCT+CGG - chr7.3:38667626-38667645 MS.gene84626:CDS 40.0%
! GGTTGTGTTTTGTGTGATGA+GGG + chr7.3:38668578-38668597 None:intergenic 40.0%
! GTTCAAGAGCATGGTTGATT+TGG - chr7.3:38670380-38670399 MS.gene84626:intron 40.0%
! TATTTTCCCCTCATCTTGTG+AGG + chr7.3:38668747-38668766 None:intergenic 40.0%
! TCCGAGATTCCTATTAGTCT+AGG - chr7.3:38668995-38669014 MS.gene84626:intron 40.0%
! TGTTTTGTGTGATGAGGGAA+TGG + chr7.3:38668573-38668592 None:intergenic 40.0%
! TTTTATGGCCTCACAAGATG+AGG - chr7.3:38668736-38668755 MS.gene84626:intron 40.0%
!! AATAGTGTCGATAAGTTCCC+CGG - chr7.3:38668458-38668477 MS.gene84626:intron 40.0%
!! CGGATGTTCTTAGTTCTAGT+GGG + chr7.3:38669183-38669202 None:intergenic 40.0%
!! GCTAGGAATGTAATGGGTTT+GGG + chr7.3:38668350-38668369 None:intergenic 40.0%
!! GCTTTCTAAGATTAGGCCTA+AGG - chr7.3:38670070-38670089 MS.gene84626:intron 40.0%
!! TAATCGTTTTGACAAGGTGG+AGG - chr7.3:38669406-38669425 MS.gene84626:intron 40.0%
!! TTGGCTTTGCAAGTGGTATT+TGG + chr7.3:38668523-38668542 None:intergenic 40.0%
!!! AGGATGGTATTTGGTTTTGG+AGG + chr7.3:38668937-38668956 None:intergenic 40.0%
!!! CTACAAGGTGTTTTTGGAGT+TGG + chr7.3:38668873-38668892 None:intergenic 40.0%
!!! GCAATTTTTTGGGCTGTTAC+AGG - chr7.3:38670174-38670193 MS.gene84626:CDS 40.0%
AAAGTCCAACTGGAAAAGGG+TGG + chr7.3:38669242-38669261 None:intergenic 45.0%
AGGGTGGTCAAAGCAAAGTA+TGG + chr7.3:38669226-38669245 None:intergenic 45.0%
AGTCTTGCAATGGTGCCTAA+TGG + chr7.3:38666902-38666921 None:intergenic 45.0%
CACAACGTGAATTTGCCTTG+TGG - chr7.3:38668794-38668813 MS.gene84626:intron 45.0%
CACAAGAATACGTCTGTCAG+AGG + chr7.3:38667657-38667676 None:intergenic 45.0%
CACTTGCAATTTCGCTTCGT+AGG + chr7.3:38667154-38667173 None:intergenic 45.0%
CATTGAAGGGGAGAGGTAAA+GGG + chr7.3:38668424-38668443 None:intergenic 45.0%
CTCTGACAGACGTATTCTTG+TGG - chr7.3:38667655-38667674 MS.gene84626:CDS 45.0%
GAAGAGAGTGAGAGAACGTT+AGG - chr7.3:38669917-38669936 MS.gene84626:intron 45.0%
GCCGGAACAAAACCATTCTT+AGG + chr7.3:38667220-38667239 None:intergenic 45.0%
GGATTTGGGAGGATGGTATT+TGG + chr7.3:38668946-38668965 None:intergenic 45.0%
GGGGAACTTATCGACACTAT+TGG + chr7.3:38668459-38668478 None:intergenic 45.0%
GTACCTCTATAAGTGCCCTT+TGG + chr7.3:38670762-38670781 None:intergenic 45.0%
GTGTGATGAGGGAATGGAAT+CGG + chr7.3:38668567-38668586 None:intergenic 45.0%
GTTAGAAATGGGGATTTGGG+AGG + chr7.3:38668957-38668976 None:intergenic 45.0%
TAGGGTTATCGATGCACACT+TGG + chr7.3:38667135-38667154 None:intergenic 45.0%
TCATCATCAGCTCTCACTGA+TGG - chr7.3:38671119-38671138 MS.gene84626:CDS 45.0%
TCATTGAAGGGGAGAGGTAA+AGG + chr7.3:38668425-38668444 None:intergenic 45.0%
TTATGGCCTCACAAGATGAG+GGG - chr7.3:38668738-38668757 MS.gene84626:intron 45.0%
TTGGCTCACAAGTCTTGCAA+TGG + chr7.3:38666912-38666931 None:intergenic 45.0%
TTGGGAGGAGAAACTCTACA+AGG + chr7.3:38668888-38668907 None:intergenic 45.0%
TTGTCCTCGGTTGCAAGAAA+TGG + chr7.3:38671152-38671171 None:intergenic 45.0%
! ACAGGAGCACAACTTGTGAA+GGG - chr7.3:38670192-38670211 MS.gene84626:CDS 45.0%
! ATGTGCAAGAGGGGTATGTT+GGG + chr7.3:38669460-38669479 None:intergenic 45.0%
! GAGAGTCTAACTAGCTTGGA+AGG - chr7.3:38669499-38669518 MS.gene84626:intron 45.0%
! GGGTTGTGTTTTGTGTGATG+AGG + chr7.3:38668579-38668598 None:intergenic 45.0%
! TACAGGAGCACAACTTGTGA+AGG - chr7.3:38670191-38670210 MS.gene84626:CDS 45.0%
! TGTCTCTTTTGGCAAAGTGG+AGG + chr7.3:38669285-38669304 None:intergenic 45.0%
! TTTGACCACCCTTTTCCAGT+TGG - chr7.3:38669234-38669253 MS.gene84626:intron 45.0%
!! AAAGGAAATCGCATCGGTTG+AGG + chr7.3:38670538-38670557 None:intergenic 45.0%
!! ACAACGTTTGGCTTTGCAAG+TGG + chr7.3:38668530-38668549 None:intergenic 45.0%
!! CCGGATGTTCTTAGTTCTAG+TGG + chr7.3:38669184-38669203 None:intergenic 45.0%
!! GGCTAGGAATGTAATGGGTT+TGG + chr7.3:38668351-38668370 None:intergenic 45.0%
!! GGGAGGATGGTATTTGGTTT+TGG + chr7.3:38668940-38668959 None:intergenic 45.0%
!! TCGCATGGGAAATTGGTTTG+TGG + chr7.3:38669104-38669123 None:intergenic 45.0%
!! TGAAGGGTGTTGTGTTGGTT+TGG + chr7.3:38668400-38668419 None:intergenic 45.0%
!!! TTTTTGAGATTCCCTCTGGG+AGG - chr7.3:38670306-38670325 MS.gene84626:intron 45.0%
!! AAAAAATAATAAATAATCTA+AGG + chr7.3:38670673-38670692 None:intergenic 5.0%
!! ATTATATAATAAATATTACA+TGG + chr7.3:38669690-38669709 None:intergenic 5.0%
!! TAAATTAAATTTATTAGAAA+AGG + chr7.3:38667803-38667822 None:intergenic 5.0%
!!! AGATTATTTATTATTTTTTT+TGG - chr7.3:38670674-38670693 MS.gene84626:CDS 5.0%
AACCAATTTCCCATGCGACC+CGG - chr7.3:38669106-38669125 MS.gene84626:intron 50.0%
AGCGGAGAGTCTAACTAGCT+TGG - chr7.3:38669495-38669514 MS.gene84626:intron 50.0%
AGGTACGAGTTTGTGGTACG+CGG + chr7.3:38669839-38669858 None:intergenic 50.0%
ATGTTCTCAACTCCTCCCAG+AGG + chr7.3:38670321-38670340 None:intergenic 50.0%
ATTAGCGGGATGTGCAAGAG+GGG + chr7.3:38669469-38669488 None:intergenic 50.0%
CATCCCGCTAATGAACAGAG+CGG - chr7.3:38669477-38669496 MS.gene84626:intron 50.0%
CATTAGCGGGATGTGCAAGA+GGG + chr7.3:38669470-38669489 None:intergenic 50.0%
CGAACACACAACCTTCTGCA+AGG - chr7.3:38670827-38670846 MS.gene84626:CDS 50.0%
CTCCTTACGAGTGACATCCA+CGG + chr7.3:38667368-38667387 None:intergenic 50.0%
CTCTCCGCTCTGTTCATTAG+CGG + chr7.3:38669484-38669503 None:intergenic 50.0%
GAAATGGGGATTTGGGAGGA+TGG + chr7.3:38668953-38668972 None:intergenic 50.0%
GCAGTACAGGTACGAGTTTG+TGG + chr7.3:38669846-38669865 None:intergenic 50.0%
GGGAGAGGTAAAGGGTTGAA+GGG + chr7.3:38668416-38668435 None:intergenic 50.0%
TCAGCTCTCACTGATGGTCT+TGG - chr7.3:38671125-38671144 MS.gene84626:CDS 50.0%
TCATTAGCGGGATGTGCAAG+AGG + chr7.3:38669471-38669490 None:intergenic 50.0%
TCTCCGCTCTGTTCATTAGC+GGG + chr7.3:38669483-38669502 None:intergenic 50.0%
TGGTCCATTTCTTGCAACCG+AGG - chr7.3:38671145-38671164 MS.gene84626:CDS 50.0%
TGTTCTCAACTCCTCCCAGA+GGG + chr7.3:38670320-38670339 None:intergenic 50.0%
TTCTCGTCATTGAAGGGGAG+AGG + chr7.3:38668431-38668450 None:intergenic 50.0%
TTTCTCATGGAGCCGATGAG+AGG + chr7.3:38668835-38668854 None:intergenic 50.0%
! CTCTTTTGGCAAAGTGGAGG+TGG + chr7.3:38669282-38669301 None:intergenic 50.0%
! GATGTGCAAGAGGGGTATGT+TGG + chr7.3:38669461-38669480 None:intergenic 50.0%
! TTGTGGTGGAGAGACATCTG+CGG + chr7.3:38669145-38669164 None:intergenic 50.0%
! TTTGCGTTGGTACGCAGTAC+AGG + chr7.3:38669859-38669878 None:intergenic 50.0%
!! ACTTGTGAAGGGCACTCTAG+AGG - chr7.3:38670203-38670222 MS.gene84626:CDS 50.0%
!! AGGGTTGAAGGGTGTTGTGT+TGG + chr7.3:38668405-38668424 None:intergenic 50.0%
!! GAAGGGCACTCTAGAGGTAA+AGG - chr7.3:38670209-38670228 MS.gene84626:CDS 50.0%
ACGGGCAACTTCCTTGCAGA+AGG + chr7.3:38670841-38670860 None:intergenic 55.0%
AGAGACATCTGCGGTCTAGG+TGG + chr7.3:38669136-38669155 None:intergenic 55.0%
AGGGATGGAGATCGTGCTTC+CGG + chr7.3:38668480-38668499 None:intergenic 55.0%
CACCAACACTGCCCTCACAT+CGG - chr7.3:38670794-38670813 MS.gene84626:CDS 55.0%
CGTGGATGTCACTCGTAAGG+AGG - chr7.3:38667366-38667385 MS.gene84626:CDS 55.0%
CTATAAGTGCCCTTTGGGCC+CGG + chr7.3:38670756-38670775 None:intergenic 55.0%
GACCGTGGATGTCACTCGTA+AGG - chr7.3:38667363-38667382 MS.gene84626:CDS 55.0%
GAGACATCTGCGGTCTAGGT+GGG + chr7.3:38669135-38669154 None:intergenic 55.0%
GATTCCCTCTGCCGATGTGA+GGG + chr7.3:38670808-38670827 None:intergenic 55.0%
GGGGAGAGGTAAAGGGTTGA+AGG + chr7.3:38668417-38668436 None:intergenic 55.0%
TGGAGAGACATCTGCGGTCT+AGG + chr7.3:38669139-38669158 None:intergenic 55.0%
! AGTTTAGGTGGGTTCGGCTC+CGG - chr7.3:38670705-38670724 MS.gene84626:CDS 55.0%
!! ATCGCATCGGTTGAGGAACC+TGG + chr7.3:38670531-38670550 None:intergenic 55.0%
!! CAGAGGTGTCGCCGAGAATA+AGG + chr7.3:38667640-38667659 None:intergenic 55.0%
!! GATGTGAGGGCAGTGTTGGT+GGG + chr7.3:38670795-38670814 None:intergenic 55.0%
!! GGCCCAAAGGGCACTTATAG+AGG - chr7.3:38670756-38670775 MS.gene84626:CDS 55.0%
ACTGCCCTCACATCGGCAGA+GGG - chr7.3:38670801-38670820 MS.gene84626:CDS 60.0%
CGATTCCCTCTGCCGATGTG+AGG + chr7.3:38670809-38670828 None:intergenic 60.0%
GGATGGAGATCGTGCTTCCG+GGG + chr7.3:38668478-38668497 None:intergenic 60.0%
GGGATGGAGATCGTGCTTCC+GGG + chr7.3:38668479-38668498 None:intergenic 60.0%
TGCCGATGTGAGGGCAGTGT+TGG + chr7.3:38670799-38670818 None:intergenic 60.0%
TGCCGGGTCGCATGGGAAAT+TGG + chr7.3:38669111-38669130 None:intergenic 60.0%
! CGATGTGAGGGCAGTGTTGG+TGG + chr7.3:38670796-38670815 None:intergenic 60.0%
CACTGCCCTCACATCGGCAG+AGG - chr7.3:38670800-38670819 MS.gene84626:CDS 65.0%
CTGCGGTCTAGGTGGGATGC+CGG + chr7.3:38669128-38669147 None:intergenic 65.0%
TCCGGTCACCACCAGGGTCA+GGG - chr7.3:38670723-38670742 MS.gene84626:CDS 65.0%
TGCGGTCTAGGTGGGATGCC+GGG + chr7.3:38669127-38669146 None:intergenic 65.0%
TTCGGCTCCGGTCACCACCA+GGG - chr7.3:38670717-38670736 MS.gene84626:CDS 65.0%
AGGTGGGATGCCGGGTCGCA+TGG + chr7.3:38669119-38669138 None:intergenic 70.0%
CTCCGGTCACCACCAGGGTC+AGG - chr7.3:38670722-38670741 MS.gene84626:CDS 70.0%
GGTGGGATGCCGGGTCGCAT+GGG + chr7.3:38669118-38669137 None:intergenic 70.0%
GTTCGGCTCCGGTCACCACC+AGG - chr7.3:38670716-38670735 MS.gene84626:CDS 70.0%
! GCCCTGACCCTGGTGGTGAC+CGG + chr7.3:38670727-38670746 None:intergenic 70.0%


Chromosome Type Strat End Strand Name
chr7.3 gene 38666752 38671187 38666752 ID=MS.gene84626
chr7.3 mRNA 38666752 38671187 38666752 ID=MS.gene84626.t1;Parent=MS.gene84626
chr7.3 exon 38670560 38671187 38670560 ID=MS.gene84626.t1.exon1;Parent=MS.gene84626.t1
chr7.3 CDS 38670560 38671187 38670560 ID=cds.MS.gene84626.t1;Parent=MS.gene84626.t1
chr7.3 exon 38670171 38670317 38670171 ID=MS.gene84626.t1.exon2;Parent=MS.gene84626.t1
chr7.3 CDS 38670171 38670317 38670171 ID=cds.MS.gene84626.t1;Parent=MS.gene84626.t1
chr7.3 exon 38667316 38667743 38667316 ID=MS.gene84626.t1.exon3;Parent=MS.gene84626.t1
chr7.3 CDS 38667316 38667743 38667316 ID=cds.MS.gene84626.t1;Parent=MS.gene84626.t1
chr7.3 exon 38666752 38666850 38666752 ID=MS.gene84626.t1.exon4;Parent=MS.gene84626.t1
chr7.3 CDS 38666752 38666850 38666752 ID=cds.MS.gene84626.t1;Parent=MS.gene84626.t1
Gene Sequence

>MS.gene84626

ATGGCTACTTTCCTACGTAACTTGAATTGCTTAGTCCCATCCAACAAAGTTTCTGTGAGAATTTTGGTAGATGAAATGAGGAACAAAGTTTTATTTGTTCAAGCAGGGAAGGACTTTGTTGATGTGTTGCTAAGTTTCTTAACTTTGCCATTAGGCACCATTGCAAGACTTGTGAGCCAAGAATCTAACATGGAGAATGTTCGTGTTGGAAGCTTAAGCTTGTTATACGAAAGTGTGGCCAACCTTGACAAAAAGAATTTCAGATCAGCTTTTGAAAAAGAATTATTGGTTCGACCAATTAATTCGATGGACCGATATTGCAAATATCTAAAACTCAACATTGATGACACAGAAAAATTGAGGTCTTTCAATTGTGGCAACCAAGTGTGCATCGATAACCCTACGAAGCGAAATTGCAAGTGCTGCGAAAAGAAAAGAACCTCGTTATGTGTGGTTAAACACCATCCTAAGAATGGTTTTGTTCCGGCAACAGCAACTTTTCTTATCTCAGATGATTTGAATGTGAAGCCTGATAATTCTCAACTTTCTGAAAATAGCATTTCTCTACTTAAGTATCTTGGATGTGAAAACATAGATACTATCAAGATAGTGACCGTGGATGTCACTCGTAAGGAGGTATGTATCTATCTATCTATCTATCTGTTTATCTGTCTGTTTATATAATTCTCAACACTCTCGGATGATTTATGTTTAATGTGATTATCTTTGCTTTACAATTTGCTAAAAATAAAATAACGAATCTTGAAAGTACACAACCACAATTTTTGTTCAAATTTATCTAAATTTCCTTTGTAAAGAACAACTCTAAAGAGTATGACATTGGAAATTGCTTATTATTGTAGATACTAGATCTAGTGAAGTGCTCCTTATTCTCGGCGACACCTCTGACAGACGTATTCTTGTGGAAGAAACTATATCTTGAGAATCCAAGACCTGTTAATGTATTGGATATTGGTGGTAACATTGGAGCTGAAACATCTCATTTTGAAATAAGAGGTAAATGTTTTCCTTTTCTCAATTGTGGAATCCTTTTCTAATAAATTTAATTTAGTTTACTTAACTTTTCATAAAACTTTCAACATAAAATATAGTTTAAAGTTTACACATTAAACCTGAACGTTAAAACAATAAAAGGTTACAAAACTCAAAACTATATAAATAGAAAATCTTAATCTAGACCTGACTGTAATCCAACATATCATGACATTTTAAAAGGTTTTATACTTGAAAAATGAAATCAACAAGAAGTAAGATATTAATTATAAAAACAGCTATGCTATATATCGCGAAGTCTTTTTCCACGAGAAGTATGATATTGATTATAAAAATGTAAAATAAGCAGTTCCACAATCCTCAATTAATTATTCCTATTTTTTTTTTTTTTTGAACAGCCGAAGAGTATTTTATTTAAAACGGTTGAAAATAAGTACAAATAGTACTACACCACAAAAAATCCTGAAAAATCTAAGTCTAGAAATCCCAATACAACAATCAATGCCTGTTTTGAATACAATATAGCGCCATAGCATGCCATTCATAACAAAAACATGGAGGTCGTGACATTCTACCTAAAACCCAAACCCATTACATTCCTAGCCTTCCAAATTCGCTAAAGCATTGTATGCCAAACCAACACAACACCCTTCAACCCTTTACCTCTCCCCTTCAATGACGAGAATATCTCCAATAGTGTCGATAAGTTCCCCGGAAGCACGATCTCCATCCCTAACAATTTAAAAGTTCCATACCAAATACCACTTGCAAAGCCAAACGTTGTAAATAAATGATCTTCCGATTCCATTCCCTCATCACACAAAACACAACCCGCCTCTCTTATTTCACCTATGACCCTTCTTTTTTGAAGATTTATTCTAGTGGGTAGACAATTTAGAATCAATTGCCAAGACAAAACAACCACTTTTGAAAGAGCATAACTTTCCCACACTTTTTATAGTAATTCGGATTTTATGGCCTCACAAGATGAGGGGAAAATACTATTACAAAGATTTAGGTAAATCGTACACAACGTGAATTTGCCTTGTGGATCTAACTTGAAACACCTCTCATCGGCTCCATGAGAAAGTCTAACCGAGTAAACCAACTCCAAAAACACCTTGTAGAGTTTCTCCTCCCAAGCAAATAATGACCTTCTCCATTTTAACCTCCAAAACCAAATACCATCCTCCCAAATCCCCATTTCTAACACTTTACAATTTCTTTGTTCCGAGATTCCTATTAGTCTAGGAAAATAGGAACTAAGAGGATTCTAGCCGCACCAATTATCATGCCAAAAAAGTGTTTCAATTCCATTCCCTATTTTCTTACAGACCACAAACCAATTTCCCATGCGACCCGGCATCCCACCTAGACCGCAGATGTCTCTCCACCACAATGATTCATCTTGAAGCCCACTAGAACTAAGAACATCCGGATTAAAAGCCATTGACATACCATACTTTGCTTTGACCACCCTTTTCCAGTTGGACTTTCCATTGATCAATAATTGCCACCTCCACTTTGCCAAAAGAGACATATGTTTCAGTTAATTATTCTCCGTTAATATGTTCTTATACATTTACTTTATATTCTTAATTAGGGTAAAATTCACCTCATATACTTAATACCTTATAGTTTAATCGTTTTGACAAGGTGGAGGATTATTATTAACTCCCATAAGTGGTTGTCCCAACATACCCCTCTTGCACATCCCGCTAATGAACAGAGCGGAGAGTCTAACTAGCTTGGAAGGACCCTAATATTCCAACATTTATTTCATTTAGGTTATCTACAAAAATAGAACAATGATAATGAGTCAAATCCCATTTATCTTTTAACATTAACACCATACTTGGAACATGATAGAAAATTCATCATTGTTTATAAAATATTCAAGTCTAAACCAATCGTCATCAATCCATGTAATATTTATTATATAATACTTCCTAAGAAAGCATAAAACATAAAAGTATACATAGGATACAAAATAATATTTTTCCATAATTTTTCTGCAAAGTCATCGGTCAATTTCCCCCAAATGTATCAAATTGTTCACATGTCGCGGTACCGCGTACCACAAACTCGTACCTGTACTGCGTACCAACGCAAATTGTGAATTATGTGACTATGGTTTAGGGTTTGTGTGTAGAAGAGAGTGAGAGAACGTTAGGGAGAATTGAAATGGGGGAAGAGAGTTTTTCCAAAATTCTGATTTTTTTTTATTTGATGTTTAGGATTATATAGTTGTGTGTCCAAGTTACCATTTTTGCCCTTACTAATTTATCAAATCCCTATGATGTTGCTTTCTAAGATTAGGCCTAAGGAAATATGGTTGGGCTTCATTTATTTCTTTGTCTATTGTCTAATTCTCCTCTAGCTCACTTTAATTAAAGTAAATAACTGTGGCAATTTTTTGGGCTGTTACAGGAGCACAACTTGTGAAGGGCACTCTAGAGGTAAAGGCAATGATGAGAAAATCCAACAACAAAATATTGTATGTTATGGGTGAAGAGGACTTTGCAGACTTGTTACTGAATTTTTTGAGATTCCCTCTGGGAGGAGTTGAGAACATGTTAAATGGAAACTCTGGTATAGACAACATAGATAATCTGTTCAAGAGCATGGTTGATTTGGATCGTACAAGATATTTTAAATCCAAATCAGATTTTTTGTCTAAGCAAGTCAAATCTAATTTTGATGGAAAACAAATTATCAAGAGTCCTTCAACATATATGGTAACAGATGACTTAGTTATCACACCAGGTTCCTCAACCGATGCGATTTCCTTTCTGACTAAAATGAGAATTCCTCTCTCTGATTTGGAAGAAAGAATGATTAGCATTGGTAATAAAGAGGTAAACTTGCAGTTGTCGATTTAATTTGTTTTATTTCAACAAAGCTCCTTAGATTATTTATTATTTTTTTTGGTTACAAAAAGTTTAGGTGGGTTCGGCTCCGGTCACCACCAGGGTCAGGGCACGCCTCCGGGCCCAAAGGGCACTTATAGAGGTACTTACAGATCACCCACCAACACTGCCCTCACATCGGCAGAGGGAATCGAACACACAACCTTCTGCAAGGAAGTTGCCCGTTCCTTAGATTATTTATTATTATGATTTAGCTCAGATTCCCCTTCAATATAAGTATTTTTTTTATTGTCAATCATAAAAATTAAATTATTTATAAAGTAACGCGTATGAATGATTGTGATAATTGACAATGTAAAACATTTTGCATTGATGATGTATCAAAATTAAACCCTAGTTATTGACAAGTACATGTTTTTTATGTGTAATTTTTTTTTTTTTTTGGAATTGCAGGCTCATAGTCTTCTGAAAGCTTCTCTGATTTCATCATCAGCTCTCACTGATGGTCTTGGTCCATTTCTTGCAACCGAGGACAAGAAAATCTCAAACTAA
Protein sequence

>MS.gene84626.t1

MATFLRNLNCLVPSNKVSVRILVDEMRNKVLFVQAGKDFVDVLLSFLTLPLGTIARLVSQESNMENVRVGSLSLLYESVANLDKKNFRSAFEKELLVRPINSMDRYCKYLKLNIDDTEKLRSFNCGNQVCIDNPTKRNCKCCEKKRTSLCVVKHHPKNGFVPATATFLISDDLNVKPDNSQLSENSISLLKYLGCENIDTIKIVTVDVTHLVKCSLFSATPLTDVFLWKKLYLENPRPVNVLDIGGNIGAETSHFEIRGAQLVKGTLEVKAMMRKSNNKILYVMGEEDFADLLLNFLRFPLGGVENMLNGNSGIDNIDNLFKSMVDLDRTRYFKSKSDFLSKQVKSNFDGKQIIKSPSTYMVTDDLVITPGSSTDAISFLTKMRIPLSDLEERMISIGNKEAHSLLKASLISSSALTDGLGPFLATEDKKISN