Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene97590.t1 | AES77596.2 | 89.3 | 467 | 35 | 2 | 1 | 467 | 1 | 452 | 5.30E-226 | 793.5 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene97590.t1 | G7L479 | 89.3 | 467 | 35 | 2 | 1 | 467 | 1 | 452 | 3.8e-226 | 793.5 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene97590.t1 | MTR_7g012680 | 89.293 | 467 | 35 | 2 | 1 | 467 | 1 | 452 | 0.0 | 830 |
MS.gene97590.t1 | MTR_7g066570 | 75.876 | 485 | 97 | 2 | 1 | 465 | 1 | 485 | 0.0 | 731 |
MS.gene97590.t1 | MTR_7g066260 | 57.474 | 475 | 175 | 9 | 6 | 466 | 7 | 468 | 1.35e-175 | 502 |
MS.gene97590.t1 | MTR_7g058710 | 54.858 | 494 | 178 | 7 | 6 | 467 | 4 | 484 | 3.06e-173 | 495 |
MS.gene97590.t1 | MTR_7g066340 | 58.140 | 473 | 171 | 7 | 5 | 466 | 3 | 459 | 1.32e-168 | 483 |
MS.gene97590.t1 | MTR_7g066350 | 59.653 | 461 | 152 | 11 | 10 | 456 | 5 | 445 | 9.21e-166 | 475 |
MS.gene97590.t1 | MTR_1g041315 | 54.390 | 467 | 174 | 7 | 1 | 444 | 1 | 451 | 3.27e-157 | 455 |
MS.gene97590.t1 | MTR_7g066580 | 51.674 | 478 | 169 | 7 | 20 | 466 | 1 | 447 | 1.91e-153 | 444 |
MS.gene97590.t1 | MTR_1g014060 | 52.000 | 450 | 144 | 7 | 23 | 467 | 9 | 391 | 9.37e-147 | 424 |
MS.gene97590.t1 | MTR_7g066290 | 52.542 | 472 | 173 | 7 | 1 | 460 | 1 | 433 | 5.36e-144 | 419 |
MS.gene97590.t1 | MTR_7g066400 | 51.805 | 471 | 168 | 11 | 3 | 456 | 5 | 433 | 1.05e-142 | 416 |
MS.gene97590.t1 | MTR_7g066360 | 51.566 | 479 | 193 | 10 | 1 | 465 | 1 | 454 | 3.58e-136 | 401 |
MS.gene97590.t1 | MTR_7g058700 | 49.786 | 468 | 139 | 6 | 26 | 467 | 531 | 928 | 4.06e-134 | 409 |
MS.gene97590.t1 | MTR_7g066310 | 49.782 | 458 | 156 | 10 | 11 | 466 | 4 | 389 | 3.94e-131 | 385 |
MS.gene97590.t1 | MTR_7g066430 | 45.194 | 489 | 230 | 10 | 14 | 466 | 4 | 490 | 1.60e-129 | 384 |
MS.gene97590.t1 | MTR_7g066430 | 29.046 | 241 | 143 | 8 | 4 | 224 | 247 | 479 | 2.41e-14 | 75.5 |
MS.gene97590.t1 | MTR_2g029400 | 48.434 | 479 | 144 | 10 | 1 | 450 | 1 | 405 | 1.85e-128 | 379 |
MS.gene97590.t1 | MTR_7g066410 | 44.135 | 503 | 223 | 11 | 15 | 460 | 11 | 512 | 7.94e-120 | 360 |
MS.gene97590.t1 | MTR_7g066410 | 29.004 | 231 | 136 | 7 | 14 | 224 | 284 | 506 | 4.94e-15 | 77.8 |
MS.gene97590.t1 | MTR_7g062300 | 39.630 | 487 | 245 | 13 | 1 | 456 | 1 | 469 | 5.45e-104 | 318 |
MS.gene97590.t1 | MTR_7g062280 | 39.521 | 501 | 252 | 12 | 6 | 467 | 4 | 492 | 9.64e-104 | 318 |
MS.gene97590.t1 | MTR_7g063660 | 40.041 | 487 | 244 | 12 | 13 | 467 | 8 | 478 | 6.80e-99 | 305 |
MS.gene97590.t1 | MTR_7g063660 | 29.596 | 223 | 131 | 9 | 251 | 452 | 4 | 221 | 1.40e-13 | 73.2 |
MS.gene97590.t1 | MTR_7g063920 | 39.673 | 489 | 221 | 10 | 1 | 467 | 1 | 437 | 4.89e-98 | 301 |
MS.gene97590.t1 | MTR_7g063900 | 40.688 | 494 | 239 | 11 | 14 | 467 | 10 | 489 | 1.54e-96 | 300 |
MS.gene97590.t1 | MTR_7g063900 | 27.727 | 220 | 135 | 9 | 254 | 452 | 8 | 224 | 1.39e-13 | 73.2 |
MS.gene97590.t1 | MTR_7g063880 | 41.296 | 494 | 232 | 18 | 1 | 464 | 1 | 466 | 2.06e-96 | 298 |
MS.gene97590.t1 | MTR_7g066480 | 40.605 | 463 | 208 | 8 | 13 | 462 | 15 | 423 | 3.26e-94 | 291 |
MS.gene97590.t1 | MTR_7g063840 | 38.632 | 497 | 246 | 15 | 5 | 467 | 3 | 474 | 4.07e-94 | 293 |
MS.gene97590.t1 | MTR_3g007740 | 41.087 | 460 | 234 | 10 | 13 | 460 | 8 | 442 | 2.67e-91 | 285 |
MS.gene97590.t1 | MTR_7g063890 | 40.514 | 506 | 248 | 14 | 2 | 466 | 11 | 504 | 7.85e-91 | 285 |
MS.gene97590.t1 | MTR_7g063820 | 39.960 | 498 | 246 | 15 | 8 | 467 | 3 | 485 | 5.19e-90 | 282 |
MS.gene97590.t1 | MTR_7g066280 | 41.686 | 427 | 165 | 11 | 93 | 466 | 1 | 396 | 3.40e-86 | 270 |
MS.gene97590.t1 | MTR_7g066490 | 40.839 | 453 | 205 | 10 | 14 | 462 | 16 | 409 | 6.78e-86 | 270 |
MS.gene97590.t1 | MTR_7g063830 | 37.554 | 466 | 247 | 11 | 8 | 460 | 4 | 438 | 1.74e-84 | 267 |
MS.gene97590.t1 | MTR_7g066680 | 52.525 | 297 | 93 | 3 | 208 | 456 | 38 | 334 | 2.11e-84 | 263 |
MS.gene97590.t1 | MTR_3g065200 | 38.696 | 460 | 206 | 13 | 12 | 447 | 1 | 408 | 6.47e-84 | 266 |
MS.gene97590.t1 | MTR_7g063670 | 38.809 | 487 | 246 | 16 | 1 | 467 | 4 | 458 | 1.38e-82 | 262 |
MS.gene97590.t1 | MTR_4g019310 | 38.028 | 497 | 242 | 19 | 11 | 456 | 5 | 486 | 3.76e-82 | 263 |
MS.gene97590.t1 | MTR_4g019310 | 28.968 | 252 | 128 | 10 | 10 | 230 | 262 | 493 | 3.67e-13 | 71.6 |
MS.gene97590.t1 | MTR_4g019340 | 37.083 | 480 | 239 | 14 | 15 | 448 | 39 | 501 | 3.80e-76 | 247 |
MS.gene97590.t1 | MTR_4g019340 | 26.809 | 235 | 132 | 8 | 2 | 219 | 291 | 502 | 3.11e-13 | 72.0 |
MS.gene97590.t1 | MTR_4g017830 | 35.361 | 526 | 261 | 18 | 1 | 466 | 1 | 507 | 3.07e-75 | 245 |
MS.gene97590.t1 | MTR_4g017830 | 28.968 | 252 | 145 | 9 | 14 | 240 | 267 | 509 | 7.30e-15 | 77.4 |
MS.gene97590.t1 | MTR_4g017610 | 34.156 | 486 | 256 | 14 | 5 | 448 | 4 | 467 | 4.32e-70 | 230 |
MS.gene97590.t1 | MTR_4g017410 | 36.062 | 513 | 249 | 20 | 8 | 466 | 3 | 490 | 7.48e-70 | 231 |
MS.gene97590.t1 | MTR_4g017440 | 34.030 | 526 | 269 | 16 | 1 | 466 | 1 | 508 | 4.27e-68 | 226 |
MS.gene97590.t1 | MTR_4g017470 | 33.012 | 518 | 243 | 14 | 7 | 466 | 5 | 476 | 8.36e-60 | 204 |
MS.gene97590.t1 | MTR_4g017470 | 27.236 | 246 | 145 | 7 | 6 | 224 | 226 | 464 | 7.43e-14 | 73.9 |
MS.gene97590.t1 | MTR_4g017550 | 32.917 | 480 | 234 | 17 | 41 | 458 | 18 | 471 | 5.97e-55 | 191 |
MS.gene97590.t1 | MTR_4g017550 | 30.705 | 241 | 117 | 9 | 14 | 224 | 247 | 467 | 1.25e-15 | 79.3 |
MS.gene97590.t1 | MTR_7g063720 | 40.741 | 216 | 119 | 3 | 256 | 467 | 23 | 233 | 4.99e-44 | 155 |
MS.gene97590.t1 | MTR_7g063720 | 26.147 | 218 | 134 | 8 | 14 | 224 | 23 | 220 | 2.55e-11 | 63.9 |
MS.gene97590.t1 | MTR_7g062270 | 44.624 | 186 | 92 | 6 | 1 | 183 | 1 | 178 | 5.21e-42 | 154 |
MS.gene97590.t1 | MTR_8g023240 | 26.327 | 471 | 287 | 17 | 15 | 452 | 38 | 481 | 4.09e-34 | 135 |
MS.gene97590.t1 | MTR_2g067310 | 44.509 | 173 | 56 | 3 | 25 | 197 | 58 | 190 | 5.72e-33 | 125 |
MS.gene97590.t1 | MTR_8g445860 | 34.615 | 234 | 126 | 6 | 14 | 229 | 13 | 237 | 3.86e-30 | 117 |
MS.gene97590.t1 | MTR_8g445860 | 30.000 | 220 | 129 | 5 | 256 | 452 | 13 | 230 | 8.18e-20 | 89.0 |
MS.gene97590.t1 | MTR_0150s0010 | 33.333 | 240 | 138 | 4 | 8 | 230 | 4 | 238 | 3.11e-27 | 109 |
MS.gene97590.t1 | MTR_1g115440 | 32.766 | 235 | 136 | 4 | 13 | 230 | 10 | 239 | 1.06e-26 | 108 |
MS.gene97590.t1 | MTR_7g066390 | 40.588 | 170 | 59 | 2 | 297 | 466 | 1 | 128 | 1.12e-26 | 105 |
MS.gene97590.t1 | MTR_7g063850 | 28.956 | 297 | 182 | 4 | 187 | 466 | 4 | 288 | 2.68e-26 | 108 |
MS.gene97590.t1 | MTR_7g063690 | 32.432 | 296 | 113 | 9 | 1 | 283 | 1 | 222 | 3.55e-26 | 107 |
MS.gene97590.t1 | MTR_7g100420 | 31.348 | 319 | 180 | 8 | 166 | 460 | 94 | 397 | 3.98e-23 | 101 |
MS.gene97590.t1 | MTR_7g100420 | 54.545 | 77 | 29 | 2 | 15 | 85 | 40 | 116 | 4.32e-14 | 74.3 |
MS.gene97590.t1 | MTR_1g115455 | 31.984 | 247 | 126 | 10 | 8 | 229 | 3 | 232 | 2.81e-21 | 92.8 |
MS.gene97590.t1 | MTR_4g019240 | 41.667 | 120 | 60 | 4 | 3 | 114 | 2 | 119 | 1.29e-20 | 89.7 |
MS.gene97590.t1 | MTR_1g115450 | 35.115 | 131 | 64 | 3 | 14 | 139 | 7 | 121 | 4.37e-17 | 78.2 |
MS.gene97590.t1 | MTR_0150s0030 | 41.758 | 91 | 47 | 2 | 8 | 97 | 2 | 87 | 1.62e-15 | 75.5 |
MS.gene97590.t1 | MTR_8g445910 | 41.758 | 91 | 47 | 2 | 8 | 97 | 2 | 87 | 1.63e-14 | 73.9 |
MS.gene97590.t1 | MTR_8g044880 | 41.758 | 91 | 47 | 2 | 8 | 97 | 2 | 87 | 1.95e-14 | 73.9 |
MS.gene97590.t1 | MTR_4g019330 | 30.435 | 184 | 85 | 4 | 270 | 452 | 32 | 173 | 3.12e-14 | 71.6 |
MS.gene97590.t1 | MTR_7g063760 | 46.575 | 73 | 38 | 1 | 396 | 467 | 2 | 74 | 4.27e-14 | 67.8 |
MS.gene97590.t1 | MTR_1g115435 | 28.879 | 232 | 123 | 9 | 14 | 231 | 7 | 210 | 1.65e-13 | 70.1 |
MS.gene97590.t1 | MTR_8g445920 | 38.824 | 85 | 47 | 1 | 8 | 92 | 4 | 83 | 6.75e-13 | 65.5 |
MS.gene97590.t1 | MTR_8g044890 | 38.824 | 85 | 47 | 1 | 8 | 92 | 4 | 83 | 6.75e-13 | 65.5 |
MS.gene97590.t1 | MTR_7g063870 | 56.364 | 55 | 24 | 0 | 8 | 62 | 25 | 79 | 1.05e-12 | 68.6 |
MS.gene97590.t1 | MTR_1g115470 | 37.113 | 97 | 54 | 2 | 14 | 108 | 6 | 97 | 2.05e-12 | 69.3 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene97590.t1 | AT5G01130 | 33.913 | 460 | 267 | 8 | 14 | 460 | 9 | 444 | 2.89e-62 | 209 |
MS.gene97590.t1 | AT5G01120 | 32.008 | 478 | 287 | 12 | 15 | 456 | 10 | 485 | 1.72e-60 | 206 |
MS.gene97590.t1 | AT3G09110 | 37.107 | 318 | 180 | 7 | 14 | 318 | 9 | 319 | 2.78e-57 | 193 |
MS.gene97590.t1 | AT3G09140 | 33.065 | 496 | 256 | 16 | 14 | 452 | 9 | 485 | 1.30e-54 | 190 |
MS.gene97590.t1 | AT5G01150 | 31.263 | 483 | 284 | 11 | 14 | 460 | 9 | 479 | 1.68e-53 | 187 |
MS.gene97590.t1 | AT5G01150 | 26.432 | 227 | 141 | 7 | 251 | 453 | 4 | 228 | 1.33e-14 | 76.3 |
MS.gene97590.t1 | AT5G43240 | 30.862 | 499 | 269 | 16 | 15 | 456 | 10 | 489 | 1.44e-51 | 182 |
MS.gene97590.t1 | AT5G43240 | 30.862 | 499 | 269 | 16 | 15 | 456 | 10 | 489 | 1.44e-51 | 182 |
MS.gene97590.t1 | AT5G43240 | 30.862 | 499 | 269 | 16 | 15 | 456 | 10 | 489 | 1.44e-51 | 182 |
MS.gene97590.t1 | AT3G09140 | 31.810 | 525 | 252 | 18 | 14 | 452 | 9 | 513 | 3.78e-51 | 181 |
MS.gene97590.t1 | AT3G09120 | 34.603 | 315 | 183 | 7 | 13 | 310 | 5 | 313 | 2.14e-47 | 166 |
MS.gene97590.t1 | AT5G01140 | 29.645 | 479 | 269 | 11 | 14 | 460 | 9 | 451 | 1.80e-45 | 165 |
MS.gene97590.t1 | AT5G37320 | 27.721 | 487 | 286 | 18 | 15 | 456 | 10 | 475 | 3.44e-35 | 137 |
MS.gene97590.t1 | AT5G43240 | 27.746 | 346 | 184 | 12 | 159 | 456 | 18 | 345 | 1.61e-16 | 81.3 |
Find 69 sgRNAs with CRISPR-Local
Find 186 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GCAAAATCATCATTTGTTAA+AGG | 0.213458 | 7.4:+87164445 | MS.gene97590:CDS |
CTATATTCAGTTTGAGCTTC+TGG | 0.233458 | 7.4:-87163456 | None:intergenic |
TCAACATCTGCTTTGCAATA+TGG | 0.234722 | 7.4:+87166332 | MS.gene97590:CDS |
TAATCTTCCATCGAGTTTCT+AGG | 0.245861 | 7.4:-87163430 | None:intergenic |
GAAGAAAGAGTTATCAAAAT+TGG | 0.271117 | 7.4:+87164571 | MS.gene97590:CDS |
AAAAGTTCCTCTATCTGATT+TGG | 0.272432 | 7.4:+87164549 | MS.gene97590:CDS |
TCTGAACCGAAGAAACAATT+TGG | 0.280167 | 7.4:+87163937 | MS.gene97590:CDS |
TAAGTATGACAGTACTTTAT+AGG | 0.316812 | 7.4:-87164298 | None:intergenic |
ATTGAGCAGCATTTCTTTGC+AGG | 0.322996 | 7.4:-87163407 | None:intergenic |
GTTCTTCTTTAAAATAAAAC+TGG | 0.335816 | 7.4:-87163900 | None:intergenic |
AACAATTTGGAGTTTCTGAT+TGG | 0.340068 | 7.4:+87163950 | MS.gene97590:CDS |
AAAGTTTGTACCATTAGAAT+TGG | 0.341082 | 7.4:+87164402 | MS.gene97590:intron |
CAAAGCAGCCTTTGAGGTTA+AGG | 0.345875 | 7.4:-87163876 | None:intergenic |
GAAACTCCAAATTGTTTCTT+CGG | 0.358111 | 7.4:-87163943 | None:intergenic |
TTGTCATTTCTCCACCTTAA+CGG | 0.368739 | 7.4:-87166375 | None:intergenic |
TGTGACATTAAATATATATC+TGG | 0.369419 | 7.4:-87164187 | None:intergenic |
GGTTGATCATTTCAAATTGC+GGG | 0.381113 | 7.4:-87164246 | None:intergenic |
CATTAAATGTTACAGGGACT+TGG | 0.381134 | 7.4:+87166287 | MS.gene97590:intron |
AATATTGAAGCAGTGAGATT+TGG | 0.383738 | 7.4:+87163322 | MS.gene97590:CDS |
CAAATTCTGTTTGTTGAAGC+CGG | 0.398212 | 7.4:+87164037 | MS.gene97590:CDS |
TATTGCAAGACTAGTGTCTA+AGG | 0.415633 | 7.4:+87163294 | MS.gene97590:CDS |
AACTTGACCAACAATATCTA+TGG | 0.419276 | 7.4:+87163377 | MS.gene97590:CDS |
GAAATTTATAAGAACCGTTA+AGG | 0.430047 | 7.4:+87166361 | MS.gene97590:CDS |
TCAGTCACCATGTAAGTTGA+TGG | 0.432286 | 7.4:-87164469 | None:intergenic |
TCAAATTGCGGGGCAATAAG+AGG | 0.441131 | 7.4:-87164235 | None:intergenic |
TCATGATCAGCCAATTCTAA+TGG | 0.447075 | 7.4:-87164412 | None:intergenic |
CTTTCTTCCAAATCAGATAG+AGG | 0.448463 | 7.4:-87164556 | None:intergenic |
TTCTAACCTTCCCCTTAGGA+GGG | 0.463532 | 7.4:+87164089 | MS.gene97590:CDS |
TTTCTAACCTTCCCCTTAGG+AGG | 0.466529 | 7.4:+87164088 | MS.gene97590:CDS |
GGTTCAGATTAACAACAAAT+CGG | 0.467270 | 7.4:-87163922 | None:intergenic |
ACTGGTCAAAGCAGCCTTTG+AGG | 0.467868 | 7.4:-87163882 | None:intergenic |
TTACGTCTGCTGCTAAAGCT+TGG | 0.475407 | 7.4:+87163706 | MS.gene97590:CDS |
TCTATATGCTGAAGCTGGTA+AGG | 0.482298 | 7.4:+87163225 | MS.gene97590:CDS |
AAATTCTGTTTGTTGAAGCC+GGG | 0.488713 | 7.4:+87164038 | MS.gene97590:CDS |
GAATATTCAAACCTAGAAAA+CGG | 0.489274 | 7.4:+87163610 | MS.gene97590:CDS |
ACTTACTATGATCACAAAAG+TGG | 0.494646 | 7.4:+87164316 | MS.gene97590:CDS |
CATGTGTAAAACCCCTCCTA+AGG | 0.499269 | 7.4:-87164101 | None:intergenic |
GTTATCAATGCAGCTTAAAG+AGG | 0.502618 | 7.4:-87164137 | None:intergenic |
GGTAAGGTAGCTACACCAAT+CGG | 0.514776 | 7.4:-87164277 | None:intergenic |
TAAAGGACCATCAACTTACA+TGG | 0.516835 | 7.4:+87164462 | MS.gene97590:CDS |
GAATTGGGATTGCAGAAGAA+AGG | 0.522878 | 7.4:+87163510 | MS.gene97590:CDS |
CAAGTTATCCTTAACCTCAA+AGG | 0.525899 | 7.4:+87163868 | MS.gene97590:CDS |
AGTTTCTTAACATTGCCTCT+AGG | 0.529178 | 7.4:+87163268 | MS.gene97590:CDS |
TCTAACCTTCCCCTTAGGAG+GGG | 0.532923 | 7.4:+87164090 | MS.gene97590:CDS |
ATGACAGTACTTTATAGGTA+AGG | 0.538944 | 7.4:-87164293 | None:intergenic |
AGTTATCAAAATTGGTGTGA+AGG | 0.549919 | 7.4:+87164579 | MS.gene97590:CDS |
TGGTTGATCATTTCAAATTG+CGG | 0.551128 | 7.4:-87164247 | None:intergenic |
TATGTGACCATAGATATTGT+TGG | 0.554667 | 7.4:-87163384 | None:intergenic |
ATGTGTAAAACCCCTCCTAA+GGG | 0.556431 | 7.4:-87164100 | None:intergenic |
TATCAAAATTGGTGTGAAGG+AGG | 0.560634 | 7.4:+87164582 | MS.gene97590:CDS |
AGAGTTCTATATGCTGAAGC+TGG | 0.564202 | 7.4:+87163220 | MS.gene97590:CDS |
AGCTACCTTCTGACGAGGAT+AGG | 0.572949 | 7.4:+87163975 | MS.gene97590:CDS |
ATCAACCAACTCTTACCGAT+TGG | 0.574321 | 7.4:+87164262 | MS.gene97590:CDS |
ATTTATAAGAACCGTTAAGG+TGG | 0.581384 | 7.4:+87166364 | MS.gene97590:CDS |
AAAGTCAATAAAATCATCCC+CGG | 0.589690 | 7.4:-87164056 | None:intergenic |
ATCTGCCTATCCTCGTCAGA+AGG | 0.594880 | 7.4:-87163980 | None:intergenic |
CTTACTATGATCACAAAAGT+GGG | 0.600115 | 7.4:+87164317 | MS.gene97590:CDS |
TCGCACACAAAATACTGCAC+AGG | 0.606391 | 7.4:-87163487 | None:intergenic |
GCTCAATCCTAGAAACTCGA+TGG | 0.610851 | 7.4:+87163423 | MS.gene97590:CDS |
TAAAACCCCTCCTAAGGGGA+AGG | 0.611425 | 7.4:-87164095 | None:intergenic |
CTACACCAATCGGTAAGAGT+TGG | 0.612155 | 7.4:-87164267 | None:intergenic |
AATTCTGTTTGTTGAAGCCG+GGG | 0.617462 | 7.4:+87164039 | MS.gene97590:CDS |
TTTCTAGGTTTGAATATTCG+GGG | 0.622034 | 7.4:-87163606 | None:intergenic |
GTTGATCATTTCAAATTGCG+GGG | 0.631191 | 7.4:-87164245 | None:intergenic |
ATATTGCAAAGCAGATGTTG+AGG | 0.659281 | 7.4:-87166330 | None:intergenic |
TGTGTAAAACCCCTCCTAAG+GGG | 0.668372 | 7.4:-87164099 | None:intergenic |
GATATATATTTAATGTCACA+AGG | 0.683736 | 7.4:+87164190 | MS.gene97590:CDS |
AGTCTTGCAATAGTACCTAG+AGG | 0.697417 | 7.4:-87163283 | None:intergenic |
TGGAGAGCTACCTTCTGACG+AGG | 0.724231 | 7.4:+87163970 | MS.gene97590:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | TAAAAATAAAAAATAAAATA+TGG | + | chr7.4:87165056-87165075 | MS.gene97590:intron | 0.0% |
!!! | AATAAAAATTTTAAAAAATA+CGG | - | chr7.4:87165851-87165870 | None:intergenic | 0.0% |
!!! | AATTTTATTTTATATTTTTT+TGG | - | chr7.4:87166069-87166088 | None:intergenic | 0.0% |
!!! | ATTTTATTTTATATTTTTTT+GGG | - | chr7.4:87166068-87166087 | None:intergenic | 0.0% |
!!! | TAAAAAAAATTAAAAAATTT+TGG | - | chr7.4:87166018-87166037 | None:intergenic | 0.0% |
!! | AAAAATCTTAATTAAAATTC+TGG | - | chr7.4:87165661-87165680 | None:intergenic | 10.0% |
!! | ATCTAAAAAAAAAAATTTAC+AGG | + | chr7.4:87166210-87166229 | MS.gene97590:intron | 10.0% |
!! | TCTAAAAAAAAAAATTTACA+GGG | + | chr7.4:87166211-87166230 | MS.gene97590:intron | 10.0% |
!! | TTAAAAAAATGAAAAAATTC+TGG | + | chr7.4:87165084-87165103 | MS.gene97590:intron | 10.0% |
!!! | AAAGAAATTCATATTTTTTT+CGG | + | chr7.4:87165168-87165187 | MS.gene97590:intron | 10.0% |
!!! | CTAAAAAAAAAAATTTTACA+GGG | - | chr7.4:87164739-87164758 | None:intergenic | 10.0% |
!!! | TAAAAAAAAAAATTTTACAG+GGG | - | chr7.4:87164738-87164757 | None:intergenic | 10.0% |
!!! | TCTAAAAAAAAAAATTTTAC+AGG | - | chr7.4:87164740-87164759 | None:intergenic | 10.0% |
!!! | TTATTTCCAAAAAAATTTTT+GGG | - | chr7.4:87165442-87165461 | None:intergenic | 10.0% |
!!! | TTTATTTCCAAAAAAATTTT+TGG | - | chr7.4:87165443-87165462 | None:intergenic | 10.0% |
!! | CTAAAAAAAAAAATTTACAG+GGG | + | chr7.4:87166212-87166231 | MS.gene97590:intron | 15.0% |
!! | CTGAAAATATTAAAAAATTC+TGG | - | chr7.4:87165939-87165958 | None:intergenic | 15.0% |
!! | TAAAAATTGTGAAAAAATTC+TGG | - | chr7.4:87165608-87165627 | None:intergenic | 15.0% |
!! | TATTTATAAACCTAGAATAA+GGG | - | chr7.4:87165409-87165428 | None:intergenic | 15.0% |
!! | TCTGAAAAAAATTAAAATTC+TGG | - | chr7.4:87165711-87165730 | None:intergenic | 15.0% |
!!! | AAAACAAAATGTTTTTATGA+GGG | + | chr7.4:87166183-87166202 | MS.gene97590:intron | 15.0% |
!!! | AAAATTCCCAAAAATTTTTT+TGG | + | chr7.4:87165433-87165452 | MS.gene97590:intron | 15.0% |
!!! | AAAATTTTTTGTTTTGGTTT+TGG | + | chr7.4:87164772-87164791 | MS.gene97590:intron | 15.0% |
!!! | ATTTTCATTAGTATTTTTTC+CGG | - | chr7.4:87165325-87165344 | None:intergenic | 15.0% |
!!! | CAAAACAAAAAATTTTTATG+AGG | - | chr7.4:87164768-87164787 | None:intergenic | 15.0% |
!!! | CTCATAAAAATTTTTTGTTT+TGG | + | chr7.4:87164766-87164785 | MS.gene97590:intron | 15.0% |
!! | CTATTTATAAACCTAGAATA+AGG | - | chr7.4:87165410-87165429 | None:intergenic | 20.0% |
!! | GATATATATTTAATGTCACA+AGG | + | chr7.4:87164190-87164209 | MS.gene97590:CDS | 20.0% |
!! | GGAAAAAAGTTTAAAAATTC+TGG | - | chr7.4:87165830-87165849 | None:intergenic | 20.0% |
!! | TGTGACATTAAATATATATC+TGG | - | chr7.4:87164190-87164209 | None:intergenic | 20.0% |
!!! | AAAACATTTTGTTTTGGTTT+TGG | - | chr7.4:87166178-87166197 | None:intergenic | 20.0% |
!!! | AACAAAAAATTTTTATGAGG+TGG | - | chr7.4:87164765-87164784 | None:intergenic | 20.0% |
!!! | ATGAATTTCTTTCATTTTTC+CGG | - | chr7.4:87165160-87165179 | None:intergenic | 20.0% |
!!! | CAAAACAAAATGTTTTTATG+AGG | + | chr7.4:87166182-87166201 | MS.gene97590:intron | 20.0% |
!!! | CTCATAAAAACATTTTGTTT+TGG | - | chr7.4:87166184-87166203 | None:intergenic | 20.0% |
!!! | CTCTAATTGATTATTTCTAT+AGG | + | chr7.4:87163832-87163851 | MS.gene97590:intron | 20.0% |
!!! | GTTCTTCTTTAAAATAAAAC+TGG | - | chr7.4:87163903-87163922 | None:intergenic | 20.0% |
!!! | TTCCAAATTTTTTTCAATAC+CGG | + | chr7.4:87165138-87165157 | MS.gene97590:intron | 20.0% |
!!! | TTGTTCATTTGATTTTCTTA+CGG | - | chr7.4:87164020-87164039 | None:intergenic | 20.0% |
!!! | TTTTCATTAGTATTTTTTCC+GGG | - | chr7.4:87165324-87165343 | None:intergenic | 20.0% |
! | AAAGTTTGTACCATTAGAAT+TGG | + | chr7.4:87164402-87164421 | MS.gene97590:intron | 25.0% |
! | GAAATTTATAAGAACCGTTA+AGG | + | chr7.4:87166361-87166380 | MS.gene97590:CDS | 25.0% |
! | GAAGAAAGAGTTATCAAAAT+TGG | + | chr7.4:87164571-87164590 | MS.gene97590:CDS | 25.0% |
! | GAATATTCAAACCTAGAAAA+CGG | + | chr7.4:87163610-87163629 | MS.gene97590:CDS | 25.0% |
! | GATTATTCTCACGATAAAAT+TGG | + | chr7.4:87164370-87164389 | MS.gene97590:intron | 25.0% |
! | TAAGTATGACAGTACTTTAT+AGG | - | chr7.4:87164301-87164320 | None:intergenic | 25.0% |
!! | AAATGATGATTTTGCAATAG+AGG | - | chr7.4:87164440-87164459 | None:intergenic | 25.0% |
!! | GCAAAATCATCATTTGTTAA+AGG | + | chr7.4:87164445-87164464 | MS.gene97590:CDS | 25.0% |
!! | GTTTTCTAGGTTTGAATATT+CGG | - | chr7.4:87163611-87163630 | None:intergenic | 25.0% |
!! | TCTAATGGTACAAACTTTTA+TGG | - | chr7.4:87164400-87164419 | None:intergenic | 25.0% |
!! | TTCCGGTATTGAAAAAAATT+TGG | - | chr7.4:87165143-87165162 | None:intergenic | 25.0% |
!! | TTTTCTAGGTTTGAATATTC+GGG | - | chr7.4:87163610-87163629 | None:intergenic | 25.0% |
!!! | CATATTTTTTCCCTTATTCT+AGG | + | chr7.4:87165396-87165415 | MS.gene97590:intron | 25.0% |
!!! | TTTTCGGAAAGTATTTTTTC+CGG | + | chr7.4:87165184-87165203 | MS.gene97590:intron | 25.0% |
AAAAAAATAGAAATGCCACG+TGG | - | chr7.4:87164899-87164918 | None:intergenic | 30.0% | |
AAAAGTTCCTCTATCTGATT+TGG | + | chr7.4:87164549-87164568 | MS.gene97590:CDS | 30.0% | |
AAAGTCAATAAAATCATCCC+CGG | - | chr7.4:87164059-87164078 | None:intergenic | 30.0% | |
AACTTGACCAACAATATCTA+TGG | + | chr7.4:87163377-87163396 | MS.gene97590:CDS | 30.0% | |
AATATTGAAGCAGTGAGATT+TGG | + | chr7.4:87163322-87163341 | MS.gene97590:CDS | 30.0% | |
ACCCTTCATTAAATGTTACA+GGG | + | chr7.4:87166281-87166300 | MS.gene97590:intron | 30.0% | |
ACTTACTATGATCACAAAAG+TGG | + | chr7.4:87164316-87164335 | MS.gene97590:CDS | 30.0% | |
AGGAACAAAAAATGCTATTG+TGG | + | chr7.4:87163559-87163578 | MS.gene97590:CDS | 30.0% | |
AGTTATCAAAATTGGTGTGA+AGG | + | chr7.4:87164579-87164598 | MS.gene97590:CDS | 30.0% | |
ATACACAAAAAACCTAAGCT+CGG | + | chr7.4:87165361-87165380 | MS.gene97590:intron | 30.0% | |
ATGACAGTACTTTATAGGTA+AGG | - | chr7.4:87164296-87164315 | None:intergenic | 30.0% | |
ATTTATAAGAACCGTTAAGG+TGG | + | chr7.4:87166364-87166383 | MS.gene97590:CDS | 30.0% | |
CTTACTATGATCACAAAAGT+GGG | + | chr7.4:87164317-87164336 | MS.gene97590:CDS | 30.0% | |
GGAACAAAAAATGCTATTGT+GGG | + | chr7.4:87163560-87163579 | MS.gene97590:CDS | 30.0% | |
GGTTCAGATTAACAACAAAT+CGG | - | chr7.4:87163925-87163944 | None:intergenic | 30.0% | |
TACCCTTCATTAAATGTTAC+AGG | + | chr7.4:87166280-87166299 | MS.gene97590:intron | 30.0% | |
TATCAATCTTACAAAATCCG+CGG | + | chr7.4:87164348-87164367 | MS.gene97590:intron | 30.0% | |
TATGTGACCATAGATATTGT+TGG | - | chr7.4:87163387-87163406 | None:intergenic | 30.0% | |
TCCCTGTAACATTTAATGAA+GGG | - | chr7.4:87166285-87166304 | None:intergenic | 30.0% | |
TGGTTGATCATTTCAAATTG+CGG | - | chr7.4:87164250-87164269 | None:intergenic | 30.0% | |
TGTATTTATAAACCGAGCTT+AGG | - | chr7.4:87165376-87165395 | None:intergenic | 30.0% | |
TTACTATATATGTCGAGCTT+AGG | - | chr7.4:87165479-87165498 | None:intergenic | 30.0% | |
TTTCTAGGTTTGAATATTCG+GGG | - | chr7.4:87163609-87163628 | None:intergenic | 30.0% | |
! | AACAATTTGGAGTTTCTGAT+TGG | + | chr7.4:87163950-87163969 | MS.gene97590:CDS | 30.0% |
! | GAAACTCCAAATTGTTTCTT+CGG | - | chr7.4:87163946-87163965 | None:intergenic | 30.0% |
!! | AATGTCGTTTGAGCATTTTT+AGG | + | chr7.4:87163539-87163558 | MS.gene97590:CDS | 30.0% |
!! | ACAAAATGTTTTTATGAGGG+TGG | + | chr7.4:87166186-87166205 | MS.gene97590:intron | 30.0% |
!!! | TTTCGGAAAGTATTTTTTCC+GGG | + | chr7.4:87165185-87165204 | MS.gene97590:intron | 30.0% |
AAAAGTGGCCTATATTACAG+GGG | + | chr7.4:87166243-87166262 | MS.gene97590:intron | 35.0% | |
AAACTTGCCCCAAAAACATT+AGG | - | chr7.4:87163688-87163707 | None:intergenic | 35.0% | |
AGTTTCTTAACATTGCCTCT+AGG | + | chr7.4:87163268-87163287 | MS.gene97590:CDS | 35.0% | |
ATAGATTCTGATGAGTCACA+GGG | - | chr7.4:87164806-87164825 | None:intergenic | 35.0% | |
ATATTGCAAAGCAGATGTTG+AGG | - | chr7.4:87166333-87166352 | None:intergenic | 35.0% | |
CAAAAGTGGCCTATATTACA+GGG | + | chr7.4:87166242-87166261 | MS.gene97590:intron | 35.0% | |
CAAGTTATCCTTAACCTCAA+AGG | + | chr7.4:87163868-87163887 | MS.gene97590:CDS | 35.0% | |
CATTAAATGTTACAGGGACT+TGG | + | chr7.4:87166287-87166306 | MS.gene97590:intron | 35.0% | |
CTATATTCAGTTTGAGCTTC+TGG | - | chr7.4:87163459-87163478 | None:intergenic | 35.0% | |
CTCTTTCTTGTCGATATCAA+CGG | - | chr7.4:87163764-87163783 | None:intergenic | 35.0% | |
CTTTCTTCCAAATCAGATAG+AGG | - | chr7.4:87164559-87164578 | None:intergenic | 35.0% | |
GGTTGATCATTTCAAATTGC+GGG | - | chr7.4:87164249-87164268 | None:intergenic | 35.0% | |
GTCCCTGTAACATTTAATGA+AGG | - | chr7.4:87166286-87166305 | None:intergenic | 35.0% | |
GTTATCAATGCAGCTTAAAG+AGG | - | chr7.4:87164140-87164159 | None:intergenic | 35.0% | |
GTTGATCATTTCAAATTGCG+GGG | - | chr7.4:87164248-87164267 | None:intergenic | 35.0% | |
TAAAGGACCATCAACTTACA+TGG | + | chr7.4:87164462-87164481 | MS.gene97590:CDS | 35.0% | |
TAATCTTCCATCGAGTTTCT+AGG | - | chr7.4:87163433-87163452 | None:intergenic | 35.0% | |
TATCAAAATTGGTGTGAAGG+AGG | + | chr7.4:87164582-87164601 | MS.gene97590:CDS | 35.0% | |
TATTGCAAGACTAGTGTCTA+AGG | + | chr7.4:87163294-87163313 | MS.gene97590:CDS | 35.0% | |
TCAACATCTGCTTTGCAATA+TGG | + | chr7.4:87166332-87166351 | MS.gene97590:CDS | 35.0% | |
TCATGATCAGCCAATTCTAA+TGG | - | chr7.4:87164415-87164434 | None:intergenic | 35.0% | |
TCGGAATACACAAAAATTCC+CGG | + | chr7.4:87165303-87165322 | MS.gene97590:intron | 35.0% | |
TCGGAATACACAAAAATTCC+CGG | - | chr7.4:87165322-87165303 | None:intergenic | 35.0% | |
TCTGAACCGAAGAAACAATT+TGG | + | chr7.4:87163937-87163956 | MS.gene97590:CDS | 35.0% | |
TTTATCGTGAGAATAATCCG+CGG | - | chr7.4:87164368-87164387 | None:intergenic | 35.0% | |
! | AAATTCTGTTTGTTGAAGCC+GGG | + | chr7.4:87164038-87164057 | MS.gene97590:CDS | 35.0% |
! | ACGTGATGCCTAATGTTTTT+GGG | + | chr7.4:87163677-87163696 | MS.gene97590:CDS | 35.0% |
! | ACTTTTAGCCCCTGTAATAT+AGG | - | chr7.4:87166254-87166273 | None:intergenic | 35.0% |
! | AGTATTTTGTGTGCGAGAAT+TGG | + | chr7.4:87163494-87163513 | MS.gene97590:CDS | 35.0% |
! | CAAATTCTGTTTGTTGAAGC+CGG | + | chr7.4:87164037-87164056 | MS.gene97590:CDS | 35.0% |
! | CCTTAACAAAACCGTTTTCT+AGG | - | chr7.4:87163624-87163643 | None:intergenic | 35.0% |
! | CTTTTAGCCCCTGTAATATA+GGG | + | chr7.4:87164697-87164716 | MS.gene97590:intron | 35.0% |
! | GTATTTTGTGTGCGAGAATT+GGG | + | chr7.4:87163495-87163514 | MS.gene97590:CDS | 35.0% |
! | TACGTGATGCCTAATGTTTT+TGG | + | chr7.4:87163676-87163695 | MS.gene97590:CDS | 35.0% |
! | TTTTTGTGTATTCCGAGCTT+AGG | + | chr7.4:87165210-87165229 | MS.gene97590:intron | 35.0% |
! | TTTTTGTGTATTCCGAGCTT+AGG | - | chr7.4:87165229-87165210 | None:intergenic | 35.0% |
!! | AAAAGTGCCCTATATTACAG+GGG | - | chr7.4:87164707-87164726 | None:intergenic | 35.0% |
!! | CAAAAGTGCCCTATATTACA+GGG | - | chr7.4:87164708-87164727 | None:intergenic | 35.0% |
!! | CTGTAATATAGGGCACTTTT+GGG | + | chr7.4:87164707-87164726 | MS.gene97590:intron | 35.0% |
!! | GAGTTTTAGTCGACAAAGAA+AGG | + | chr7.4:87163194-87163213 | MS.gene97590:CDS | 35.0% |
!!! | ATATTTTTTTGGGGTACACG+TGG | - | chr7.4:87166058-87166077 | None:intergenic | 35.0% |
!!! | CCTAGAAAACGGTTTTGTTA+AGG | + | chr7.4:87163621-87163640 | MS.gene97590:CDS | 35.0% |
!!! | CTGTAATATAGGCCACTTTT+GGG | - | chr7.4:87166243-87166262 | None:intergenic | 35.0% |
ACTCATCAGAATCTATGAGG+TGG | + | chr7.4:87164810-87164829 | MS.gene97590:intron | 40.0% | |
AGAGTTCTATATGCTGAAGC+TGG | + | chr7.4:87163220-87163239 | MS.gene97590:CDS | 40.0% | |
AGTCTTGCAATAGTACCTAG+AGG | - | chr7.4:87163286-87163305 | None:intergenic | 40.0% | |
ATCAACCAACTCTTACCGAT+TGG | + | chr7.4:87164262-87164281 | MS.gene97590:CDS | 40.0% | |
ATGTGTAAAACCCCTCCTAA+GGG | - | chr7.4:87164103-87164122 | None:intergenic | 40.0% | |
ATTGAGCAGCATTTCTTTGC+AGG | - | chr7.4:87163410-87163429 | None:intergenic | 40.0% | |
CATAGATTCTGATGAGTCAC+AGG | - | chr7.4:87164807-87164826 | None:intergenic | 40.0% | |
CCAAAAGTGGCCTATATTAC+AGG | + | chr7.4:87166241-87166260 | MS.gene97590:intron | 40.0% | |
CGTTGATATCGACAAGAAAG+AGG | + | chr7.4:87163762-87163781 | MS.gene97590:intron | 40.0% | |
CTTGTCATTCAACCTAAGCT+CGG | + | chr7.4:87165284-87165303 | MS.gene97590:intron | 40.0% | |
CTTGTCATTCAACCTAAGCT+CGG | - | chr7.4:87165303-87165284 | None:intergenic | 40.0% | |
GAATTGGGATTGCAGAAGAA+AGG | + | chr7.4:87163510-87163529 | MS.gene97590:CDS | 40.0% | |
GCTTGACACGTCATCAAAAA+AGG | + | chr7.4:87166102-87166121 | MS.gene97590:intron | 40.0% | |
GTGACTCATCAGAATCTATG+AGG | + | chr7.4:87164807-87164826 | MS.gene97590:intron | 40.0% | |
TAGATTCTGATGAGTCACAG+GGG | - | chr7.4:87164805-87164824 | None:intergenic | 40.0% | |
TCTATATGCTGAAGCTGGTA+AGG | + | chr7.4:87163225-87163244 | MS.gene97590:CDS | 40.0% | |
TGGACATTCATTTACACACG+TGG | - | chr7.4:87164879-87164898 | None:intergenic | 40.0% | |
TGTGTAAATGAATGTCCACG+TGG | + | chr7.4:87164881-87164900 | MS.gene97590:intron | 40.0% | |
! | AATTCTGTTTGTTGAAGCCG+GGG | + | chr7.4:87164039-87164058 | MS.gene97590:CDS | 40.0% |
! | AGTTTTCTAACCTTCCCCTT+AGG | + | chr7.4:87164085-87164104 | MS.gene97590:CDS | 40.0% |
! | GCTTTTAGCCCCTGTAATAT+AGG | + | chr7.4:87164696-87164715 | MS.gene97590:intron | 40.0% |
! | TCAGTCACCATGTAAGTTGA+TGG | - | chr7.4:87164472-87164491 | None:intergenic | 40.0% |
!! | AAAGATTCTGCTGACTCAAG+GGG | + | chr7.4:87166144-87166163 | MS.gene97590:intron | 40.0% |
!! | CAAAGATTCTGCTGACTCAA+GGG | + | chr7.4:87166143-87166162 | MS.gene97590:intron | 40.0% |
!! | CCAAAAGTGCCCTATATTAC+AGG | - | chr7.4:87164709-87164728 | None:intergenic | 40.0% |
!! | CCTGTAATATAGGCCACTTT+TGG | - | chr7.4:87166244-87166263 | None:intergenic | 40.0% |
!! | CCTGTAATATAGGGCACTTT+TGG | + | chr7.4:87164706-87164725 | MS.gene97590:intron | 40.0% |
!! | CGTGATGCCTAATGTTTTTG+GGG | + | chr7.4:87163678-87163697 | MS.gene97590:CDS | 40.0% |
!! | TCAAAGATTCTGCTGACTCA+AGG | + | chr7.4:87166142-87166161 | MS.gene97590:intron | 40.0% |
AGTCAGCAGAATCTTTGACG+TGG | - | chr7.4:87166140-87166159 | None:intergenic | 45.0% | |
CATGTGTAAAACCCCTCCTA+AGG | - | chr7.4:87164104-87164123 | None:intergenic | 45.0% | |
CTACACCAATCGGTAAGAGT+TGG | - | chr7.4:87164270-87164289 | None:intergenic | 45.0% | |
GCTCAATCCTAGAAACTCGA+TGG | + | chr7.4:87163423-87163442 | MS.gene97590:CDS | 45.0% | |
GGTAAGGTAGCTACACCAAT+CGG | - | chr7.4:87164280-87164299 | None:intergenic | 45.0% | |
TCAAATTGCGGGGCAATAAG+AGG | - | chr7.4:87164238-87164257 | None:intergenic | 45.0% | |
TCGCACACAAAATACTGCAC+AGG | - | chr7.4:87163490-87163509 | None:intergenic | 45.0% | |
TGTGTAAAACCCCTCCTAAG+GGG | - | chr7.4:87164102-87164121 | None:intergenic | 45.0% | |
TTACGTCTGCTGCTAAAGCT+TGG | + | chr7.4:87163706-87163725 | MS.gene97590:CDS | 45.0% | |
TTCTAACCTTCCCCTTAGGA+GGG | + | chr7.4:87164089-87164108 | MS.gene97590:CDS | 45.0% | |
TTTCTAACCTTCCCCTTAGG+AGG | + | chr7.4:87164088-87164107 | MS.gene97590:CDS | 45.0% | |
! | GGGGTTTTACACATGCTTCA+AGG | + | chr7.4:87164109-87164128 | MS.gene97590:CDS | 45.0% |
!! | AAGATTCTGCTGACTCAAGG+GGG | + | chr7.4:87166145-87166164 | MS.gene97590:intron | 45.0% |
!! | CAAAGCAGCCTTTGAGGTTA+AGG | - | chr7.4:87163879-87163898 | None:intergenic | 45.0% |
!! | AAAAAAATATTAAAAAATTC+TGG | - | chr7.4:87165888-87165907 | None:intergenic | 5.0% |
!!! | AAAAAAAATAAGAATTTTTT+CGG | + | chr7.4:87165255-87165274 | MS.gene97590:intron | 5.0% |
!!! | AAAAATTCTTATTTTTTTTT+CGG | - | chr7.4:87165254-87165273 | None:intergenic | 5.0% |
!!! | TTTTATTTTATATTTTTTTG+GGG | - | chr7.4:87166067-87166086 | None:intergenic | 5.0% |
ACAGGGGCTAAACCCAAAAG+TGG | + | chr7.4:87166228-87166247 | MS.gene97590:intron | 50.0% | |
ACTGGTCAAAGCAGCCTTTG+AGG | - | chr7.4:87163885-87163904 | None:intergenic | 50.0% | |
AGCTACCTTCTGACGAGGAT+AGG | + | chr7.4:87163975-87163994 | MS.gene97590:CDS | 50.0% | |
ATCTGCCTATCCTCGTCAGA+AGG | - | chr7.4:87163983-87164002 | None:intergenic | 50.0% | |
TAAAACCCCTCCTAAGGGGA+AGG | - | chr7.4:87164098-87164117 | None:intergenic | 50.0% | |
TCTAACCTTCCCCTTAGGAG+GGG | + | chr7.4:87164090-87164109 | MS.gene97590:CDS | 50.0% | |
CTGATGAGTCACAGGGGTCA+GGG | - | chr7.4:87164799-87164818 | None:intergenic | 55.0% | |
TCTGATGAGTCACAGGGGTC+AGG | - | chr7.4:87164800-87164819 | None:intergenic | 55.0% | |
TGATGAGTCACAGGGGTCAG+GGG | - | chr7.4:87164798-87164817 | None:intergenic | 55.0% | |
TGGAGAGCTACCTTCTGACG+AGG | + | chr7.4:87163970-87163989 | MS.gene97590:CDS | 55.0% | |
!! | CTGCTGACTCAAGGGGGTTA+GGG | + | chr7.4:87166151-87166170 | MS.gene97590:intron | 55.0% |
!! | TCTGCTGACTCAAGGGGGTT+AGG | + | chr7.4:87166150-87166169 | MS.gene97590:intron | 55.0% |
!! | TGCTGACTCAAGGGGGTTAG+GGG | + | chr7.4:87166152-87166171 | MS.gene97590:intron | 55.0% |
!! | TCTATGAGGTGGCGCTGACG+TGG | + | chr7.4:87164821-87164840 | MS.gene97590:intron | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr7.4 | gene | 87163142 | 87166394 | 87163142 | ID=MS.gene97590 |
chr7.4 | mRNA | 87163142 | 87166394 | 87163142 | ID=MS.gene97590.t1;Parent=MS.gene97590 |
chr7.4 | exon | 87163142 | 87163762 | 87163142 | ID=MS.gene97590.t1.exon1;Parent=MS.gene97590.t1 |
chr7.4 | CDS | 87163142 | 87163762 | 87163142 | ID=cds.MS.gene97590.t1;Parent=MS.gene97590.t1 |
chr7.4 | exon | 87163854 | 87164345 | 87163854 | ID=MS.gene97590.t1.exon2;Parent=MS.gene97590.t1 |
chr7.4 | CDS | 87163854 | 87164345 | 87163854 | ID=cds.MS.gene97590.t1;Parent=MS.gene97590.t1 |
chr7.4 | exon | 87164406 | 87164603 | 87164406 | ID=MS.gene97590.t1.exon3;Parent=MS.gene97590.t1 |
chr7.4 | CDS | 87164406 | 87164603 | 87164406 | ID=cds.MS.gene97590.t1;Parent=MS.gene97590.t1 |
chr7.4 | exon | 87166302 | 87166394 | 87166302 | ID=MS.gene97590.t1.exon4;Parent=MS.gene97590.t1 |
chr7.4 | CDS | 87166302 | 87166394 | 87166302 | ID=cds.MS.gene97590.t1;Parent=MS.gene97590.t1 |
Gene Sequence |
Protein sequence |