Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene46002.t1 | XP_013449064.1 | 80.3 | 473 | 92 | 1 | 1 | 472 | 1 | 473 | 2.10E-205 | 725.3 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene46002.t1 | A0A072U0X9 | 80.3 | 473 | 92 | 1 | 1 | 472 | 1 | 473 | 1.5e-205 | 725.3 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene055098 | MS.gene46002 | 0.870795 | 1.11E-66 | -1.69E-46 |
PPI:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene46002.t1 | MTR_7g066340 | 80.338 | 473 | 92 | 1 | 1 | 472 | 1 | 473 | 0.0 | 766 |
MS.gene46002.t1 | MTR_7g066310 | 67.888 | 464 | 85 | 2 | 9 | 472 | 4 | 403 | 0.0 | 607 |
MS.gene46002.t1 | MTR_7g066350 | 63.812 | 467 | 149 | 8 | 1 | 456 | 1 | 458 | 0.0 | 562 |
MS.gene46002.t1 | MTR_7g066280 | 67.593 | 432 | 68 | 2 | 91 | 472 | 1 | 410 | 0.0 | 558 |
MS.gene46002.t1 | MTR_7g066260 | 58.282 | 489 | 180 | 10 | 6 | 476 | 9 | 491 | 0.0 | 526 |
MS.gene46002.t1 | MTR_1g041315 | 60.626 | 447 | 155 | 6 | 7 | 436 | 9 | 451 | 0.0 | 521 |
MS.gene46002.t1 | MTR_7g066570 | 52.390 | 544 | 204 | 12 | 3 | 510 | 5 | 529 | 6.86e-166 | 483 |
MS.gene46002.t1 | MTR_7g066400 | 55.011 | 469 | 156 | 8 | 1 | 449 | 1 | 434 | 1.01e-162 | 471 |
MS.gene46002.t1 | MTR_7g066360 | 52.569 | 506 | 194 | 12 | 6 | 498 | 8 | 480 | 1.74e-152 | 446 |
MS.gene46002.t1 | MTR_7g012680 | 52.643 | 473 | 181 | 9 | 3 | 458 | 5 | 451 | 3.77e-149 | 436 |
MS.gene46002.t1 | MTR_7g066290 | 55.338 | 459 | 161 | 11 | 6 | 453 | 9 | 434 | 4.95e-148 | 433 |
MS.gene46002.t1 | MTR_7g058710 | 50.710 | 493 | 186 | 10 | 1 | 452 | 1 | 477 | 6.61e-146 | 429 |
MS.gene46002.t1 | MTR_7g066580 | 46.748 | 492 | 166 | 11 | 18 | 458 | 1 | 447 | 3.93e-128 | 382 |
MS.gene46002.t1 | MTR_7g066580 | 26.190 | 252 | 147 | 8 | 4 | 233 | 207 | 441 | 1.47e-12 | 70.1 |
MS.gene46002.t1 | MTR_7g058700 | 48.098 | 447 | 158 | 7 | 24 | 452 | 531 | 921 | 9.13e-119 | 373 |
MS.gene46002.t1 | MTR_2g029400 | 45.319 | 470 | 148 | 10 | 6 | 440 | 8 | 403 | 1.67e-113 | 343 |
MS.gene46002.t1 | MTR_2g029400 | 29.500 | 200 | 110 | 8 | 255 | 446 | 7 | 183 | 3.31e-11 | 65.9 |
MS.gene46002.t1 | MTR_7g066430 | 41.189 | 488 | 234 | 8 | 12 | 452 | 4 | 485 | 1.21e-112 | 345 |
MS.gene46002.t1 | MTR_7g066430 | 28.511 | 235 | 147 | 7 | 9 | 231 | 254 | 479 | 6.43e-16 | 80.9 |
MS.gene46002.t1 | MTR_7g066410 | 40.079 | 509 | 231 | 11 | 12 | 452 | 10 | 512 | 1.07e-109 | 337 |
MS.gene46002.t1 | MTR_7g066480 | 39.207 | 454 | 221 | 8 | 11 | 454 | 15 | 423 | 6.35e-93 | 291 |
MS.gene46002.t1 | MTR_7g066490 | 40.268 | 447 | 210 | 10 | 12 | 454 | 16 | 409 | 1.06e-89 | 282 |
MS.gene46002.t1 | MTR_7g062280 | 36.105 | 493 | 260 | 10 | 5 | 452 | 3 | 485 | 3.62e-88 | 281 |
MS.gene46002.t1 | MTR_7g062300 | 36.667 | 480 | 265 | 11 | 1 | 450 | 1 | 471 | 9.03e-88 | 279 |
MS.gene46002.t1 | MTR_7g063660 | 35.174 | 489 | 253 | 12 | 7 | 452 | 4 | 471 | 8.80e-87 | 277 |
MS.gene46002.t1 | MTR_7g063820 | 37.374 | 495 | 244 | 13 | 5 | 452 | 3 | 478 | 4.17e-86 | 275 |
MS.gene46002.t1 | MTR_7g063900 | 39.588 | 485 | 237 | 13 | 12 | 452 | 10 | 482 | 5.94e-85 | 273 |
MS.gene46002.t1 | MTR_7g063900 | 27.459 | 244 | 138 | 9 | 265 | 471 | 13 | 254 | 6.92e-15 | 77.8 |
MS.gene46002.t1 | MTR_7g063880 | 36.364 | 484 | 249 | 14 | 5 | 453 | 4 | 463 | 1.21e-82 | 266 |
MS.gene46002.t1 | MTR_4g019310 | 35.471 | 499 | 252 | 12 | 6 | 448 | 2 | 486 | 1.60e-82 | 266 |
MS.gene46002.t1 | MTR_4g019310 | 30.043 | 233 | 140 | 11 | 13 | 234 | 267 | 487 | 4.68e-14 | 75.1 |
MS.gene46002.t1 | MTR_7g063830 | 36.617 | 467 | 252 | 10 | 1 | 452 | 1 | 438 | 6.08e-82 | 263 |
MS.gene46002.t1 | MTR_7g063890 | 38.636 | 484 | 244 | 11 | 11 | 452 | 26 | 498 | 3.92e-80 | 260 |
MS.gene46002.t1 | MTR_7g063840 | 35.135 | 481 | 269 | 11 | 1 | 452 | 1 | 467 | 1.40e-78 | 255 |
MS.gene46002.t1 | MTR_3g007740 | 37.607 | 468 | 233 | 14 | 11 | 452 | 8 | 442 | 2.17e-77 | 251 |
MS.gene46002.t1 | MTR_7g063920 | 34.864 | 479 | 236 | 10 | 1 | 452 | 1 | 430 | 4.84e-77 | 250 |
MS.gene46002.t1 | MTR_4g017830 | 33.397 | 527 | 272 | 14 | 1 | 463 | 1 | 512 | 5.92e-77 | 253 |
MS.gene46002.t1 | MTR_4g017440 | 33.137 | 510 | 263 | 14 | 6 | 452 | 8 | 502 | 3.31e-73 | 242 |
MS.gene46002.t1 | MTR_4g019340 | 34.591 | 477 | 253 | 11 | 13 | 442 | 39 | 503 | 1.30e-72 | 241 |
MS.gene46002.t1 | MTR_4g019340 | 26.047 | 215 | 144 | 4 | 12 | 226 | 303 | 502 | 2.44e-12 | 69.7 |
MS.gene46002.t1 | MTR_3g065200 | 34.409 | 465 | 213 | 12 | 10 | 439 | 1 | 408 | 4.17e-70 | 233 |
MS.gene46002.t1 | MTR_7g066680 | 46.488 | 299 | 97 | 6 | 214 | 449 | 37 | 335 | 3.33e-69 | 227 |
MS.gene46002.t1 | MTR_7g066680 | 25.472 | 212 | 142 | 7 | 6 | 210 | 80 | 282 | 4.61e-11 | 65.1 |
MS.gene46002.t1 | MTR_7g063670 | 35.165 | 455 | 261 | 10 | 13 | 452 | 16 | 451 | 4.75e-68 | 227 |
MS.gene46002.t1 | MTR_1g014060 | 53.636 | 220 | 94 | 4 | 21 | 237 | 9 | 223 | 4.99e-67 | 223 |
MS.gene46002.t1 | MTR_1g014060 | 45.856 | 181 | 84 | 3 | 292 | 458 | 210 | 390 | 1.50e-36 | 140 |
MS.gene46002.t1 | MTR_4g017610 | 33.402 | 482 | 253 | 15 | 15 | 449 | 16 | 476 | 1.11e-66 | 224 |
MS.gene46002.t1 | MTR_4g017610 | 26.891 | 238 | 132 | 8 | 255 | 450 | 6 | 243 | 2.04e-11 | 66.6 |
MS.gene46002.t1 | MTR_4g017410 | 33.199 | 497 | 267 | 18 | 6 | 452 | 3 | 484 | 2.13e-66 | 224 |
MS.gene46002.t1 | MTR_4g017470 | 30.156 | 514 | 253 | 11 | 1 | 452 | 1 | 470 | 3.38e-57 | 199 |
MS.gene46002.t1 | MTR_4g017470 | 27.801 | 241 | 143 | 7 | 255 | 477 | 5 | 232 | 1.59e-13 | 73.6 |
MS.gene46002.t1 | MTR_7g066390 | 56.329 | 158 | 41 | 1 | 303 | 460 | 1 | 130 | 4.32e-49 | 167 |
MS.gene46002.t1 | MTR_4g017550 | 30.123 | 488 | 227 | 20 | 41 | 450 | 20 | 471 | 8.05e-46 | 168 |
MS.gene46002.t1 | MTR_7g063720 | 37.143 | 210 | 119 | 3 | 256 | 452 | 17 | 226 | 1.04e-36 | 137 |
MS.gene46002.t1 | MTR_7g063720 | 29.310 | 232 | 133 | 10 | 3 | 231 | 17 | 220 | 2.37e-17 | 82.0 |
MS.gene46002.t1 | MTR_7g062270 | 36.782 | 174 | 109 | 1 | 13 | 186 | 11 | 183 | 7.44e-30 | 121 |
MS.gene46002.t1 | MTR_7g100420 | 35.531 | 273 | 133 | 8 | 214 | 452 | 134 | 397 | 3.77e-28 | 117 |
MS.gene46002.t1 | MTR_2g067310 | 42.197 | 173 | 60 | 6 | 23 | 195 | 58 | 190 | 6.61e-27 | 109 |
MS.gene46002.t1 | MTR_7g063690 | 31.655 | 278 | 121 | 9 | 13 | 289 | 13 | 222 | 2.29e-25 | 105 |
MS.gene46002.t1 | MTR_8g023240 | 24.590 | 488 | 286 | 13 | 13 | 453 | 38 | 490 | 2.36e-25 | 110 |
MS.gene46002.t1 | MTR_1g115440 | 33.071 | 254 | 136 | 10 | 1 | 236 | 1 | 238 | 3.89e-25 | 104 |
MS.gene46002.t1 | MTR_8g445860 | 29.918 | 244 | 151 | 6 | 4 | 237 | 5 | 238 | 1.17e-24 | 103 |
MS.gene46002.t1 | MTR_8g445860 | 29.279 | 222 | 120 | 5 | 260 | 445 | 11 | 231 | 1.52e-20 | 91.3 |
MS.gene46002.t1 | MTR_7g063850 | 29.180 | 305 | 153 | 10 | 185 | 452 | 4 | 282 | 1.95e-23 | 101 |
MS.gene46002.t1 | MTR_7g063850 | 24.675 | 231 | 137 | 9 | 15 | 231 | 69 | 276 | 1.48e-11 | 65.9 |
MS.gene46002.t1 | MTR_0150s0010 | 31.102 | 254 | 140 | 8 | 1 | 236 | 1 | 237 | 2.10e-21 | 94.0 |
MS.gene46002.t1 | MTR_0150s0010 | 29.333 | 225 | 119 | 5 | 260 | 445 | 8 | 231 | 7.37e-20 | 89.4 |
MS.gene46002.t1 | MTR_4g019330 | 33.149 | 181 | 87 | 4 | 276 | 452 | 32 | 182 | 2.45e-19 | 86.7 |
MS.gene46002.t1 | MTR_1g115455 | 27.126 | 247 | 149 | 7 | 6 | 237 | 3 | 233 | 4.41e-15 | 75.5 |
MS.gene46002.t1 | MTR_4g019240 | 36.842 | 114 | 60 | 4 | 3 | 108 | 4 | 113 | 6.88e-15 | 73.6 |
MS.gene46002.t1 | MTR_1g115450 | 40.000 | 90 | 49 | 1 | 7 | 96 | 2 | 86 | 1.86e-14 | 71.2 |
MS.gene46002.t1 | MTR_1g115470 | 44.828 | 87 | 43 | 1 | 12 | 98 | 6 | 87 | 5.49e-14 | 74.7 |
MS.gene46002.t1 | MTR_1g115435 | 27.347 | 245 | 143 | 9 | 7 | 245 | 2 | 217 | 1.84e-12 | 67.4 |
MS.gene46002.t1 | MTR_0150s0030 | 37.363 | 91 | 51 | 2 | 6 | 95 | 2 | 87 | 4.78e-12 | 65.9 |
MS.gene46002.t1 | MTR_8g044880 | 37.113 | 97 | 55 | 2 | 6 | 101 | 2 | 93 | 1.23e-11 | 65.9 |
MS.gene46002.t1 | MTR_8g445910 | 38.462 | 91 | 50 | 2 | 6 | 95 | 2 | 87 | 4.06e-11 | 64.3 |
MS.gene46002.t1 | MTR_8g445920 | 40.000 | 90 | 47 | 2 | 1 | 90 | 1 | 83 | 4.25e-11 | 60.5 |
MS.gene46002.t1 | MTR_8g044890 | 40.000 | 90 | 47 | 2 | 1 | 90 | 1 | 83 | 4.25e-11 | 60.5 |
MS.gene46002.t1 | MTR_7g063760 | 43.939 | 66 | 36 | 1 | 388 | 452 | 2 | 67 | 7.41e-11 | 58.5 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene46002.t1 | AT3G09140 | 31.507 | 511 | 281 | 17 | 1 | 456 | 1 | 497 | 1.09e-60 | 209 |
MS.gene46002.t1 | AT5G01120 | 30.083 | 482 | 285 | 11 | 13 | 448 | 10 | 485 | 4.60e-58 | 202 |
MS.gene46002.t1 | AT3G09140 | 29.795 | 537 | 284 | 17 | 1 | 456 | 1 | 525 | 1.16e-56 | 199 |
MS.gene46002.t1 | AT5G01140 | 29.498 | 478 | 289 | 10 | 12 | 464 | 9 | 463 | 1.50e-56 | 197 |
MS.gene46002.t1 | AT5G01150 | 29.485 | 485 | 290 | 11 | 12 | 455 | 9 | 482 | 7.10e-56 | 196 |
MS.gene46002.t1 | AT5G43240 | 30.326 | 521 | 289 | 16 | 13 | 477 | 10 | 512 | 1.52e-52 | 187 |
MS.gene46002.t1 | AT5G43240 | 30.326 | 521 | 289 | 16 | 13 | 477 | 10 | 512 | 1.52e-52 | 187 |
MS.gene46002.t1 | AT5G43240 | 30.326 | 521 | 289 | 16 | 13 | 477 | 10 | 512 | 1.52e-52 | 187 |
MS.gene46002.t1 | AT3G09110 | 32.817 | 323 | 201 | 7 | 12 | 327 | 9 | 322 | 6.23e-50 | 176 |
MS.gene46002.t1 | AT5G01130 | 30.705 | 482 | 266 | 15 | 1 | 452 | 1 | 444 | 8.66e-50 | 178 |
MS.gene46002.t1 | AT3G09120 | 32.278 | 316 | 197 | 7 | 11 | 316 | 5 | 313 | 8.82e-41 | 150 |
MS.gene46002.t1 | AT5G37320 | 27.112 | 509 | 287 | 18 | 3 | 455 | 2 | 482 | 3.38e-40 | 152 |
MS.gene46002.t1 | AT5G43240 | 29.697 | 330 | 179 | 11 | 163 | 448 | 25 | 345 | 3.63e-23 | 101 |
Find 95 sgRNAs with CRISPR-Local
Find 168 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TAGAGCACCATTAACGTTTA+TGG | 0.174129 | 7.2:-43993568 | MS.gene46002:CDS |
CAATGTTCAGTTTCATATTC+TGG | 0.191679 | 7.2:+43994504 | None:intergenic |
CAATTTCATTACTCAAATTC+TGG | 0.194815 | 7.2:+43994351 | None:intergenic |
GATCCTAAATCCCCTATTTC+TGG | 0.194829 | 7.2:-43993600 | MS.gene46002:CDS |
CTAGCATATCCTCCAGAAAT+AGG | 0.222209 | 7.2:+43993588 | None:intergenic |
CAGAATTTGAGTAATGAAAT+TGG | 0.244591 | 7.2:-43994350 | MS.gene46002:CDS |
TGAGCACCTGCTGAGTTTCT+TGG | 0.253622 | 7.2:+43994530 | None:intergenic |
CCTCCAGAAATAGGGGATTT+AGG | 0.261981 | 7.2:+43993597 | None:intergenic |
AAGAAAAGATACCTCTTTCT+TGG | 0.262602 | 7.2:+43994181 | None:intergenic |
CAAGGTTACCATTAGAGTTT+TGG | 0.279997 | 7.2:-43994780 | MS.gene46002:CDS |
TAAATTATCAATGCAGCTTA+TGG | 0.282491 | 7.2:+43993788 | None:intergenic |
TGATCTTCTCAAATTGTCTT+TGG | 0.284928 | 7.2:-43994066 | MS.gene46002:CDS |
GATACCTTGTAACGATTATA+AGG | 0.318916 | 7.2:-43993649 | MS.gene46002:CDS |
CTTGGTGATGTTGATATTAA+CGG | 0.332558 | 7.2:+43994199 | None:intergenic |
AAAGTTGTCGTAACAACATT+TGG | 0.340302 | 7.2:+43994275 | None:intergenic |
AATACTGTGTAAGTTTCTTC+AGG | 0.340897 | 7.2:-43994418 | MS.gene46002:CDS |
ATATCATCACTTTAAATTGT+TGG | 0.353901 | 7.2:+43992052 | None:intergenic |
GAGAACAAGACTTGCAGAAT+TGG | 0.357185 | 7.2:-43994446 | MS.gene46002:CDS |
TCAAAATTTGCTTTGACAAA+CGG | 0.362323 | 7.2:-43993308 | MS.gene46002:CDS |
TAGCATATCCTCCAGAAATA+GGG | 0.363628 | 7.2:+43993589 | None:intergenic |
GAGGAAATGGTCGTTAATAT+TGG | 0.365896 | 7.2:-43993459 | MS.gene46002:CDS |
TTAACCTCCATTCGGTTACT+TGG | 0.371862 | 7.2:+43993981 | None:intergenic |
AAATGCTTGGATTAGTTAGT+AGG | 0.377156 | 7.2:+43993706 | None:intergenic |
AACCACCATCAACATAGATT+TGG | 0.380923 | 7.2:+43992115 | None:intergenic |
AACGGCCTCAACCAGTTCAT+TGG | 0.391379 | 7.2:-43993290 | MS.gene46002:intron |
GCTTCTTAACATTGCGCTTA+GGG | 0.394593 | 7.2:-43994691 | MS.gene46002:CDS |
TCAAATTCTGGAATTCTTCT+CGG | 0.402305 | 7.2:+43994363 | None:intergenic |
TTAAATCTCCTTCAGAAGCT+TGG | 0.404186 | 7.2:-43994254 | MS.gene46002:CDS |
AACCGAATGGAGGTTAATAT+TGG | 0.408331 | 7.2:-43993975 | MS.gene46002:CDS |
GGCAGGAAGTAGATCTGTTC+AGG | 0.408889 | 7.2:-43992835 | MS.gene46002:intron |
TCTGTCACCATAAACGTTAA+TGG | 0.411866 | 7.2:+43993561 | None:intergenic |
TACAAGGTATCGGTAATATC+TGG | 0.416442 | 7.2:+43993661 | None:intergenic |
AGCTTCTTAACATTGCGCTT+AGG | 0.417921 | 7.2:-43994692 | MS.gene46002:CDS |
AATATTGAAGCACTGAGCTT+TGG | 0.420564 | 7.2:-43994638 | MS.gene46002:CDS |
ATCAACCAAATCTATGTTGA+TGG | 0.421611 | 7.2:-43992120 | MS.gene46002:CDS |
AAGATATGAAATACCATCAA+TGG | 0.434003 | 7.2:+43993512 | None:intergenic |
TACTATACTAACCAATGAAC+TGG | 0.434085 | 7.2:+43993279 | None:intergenic |
CTTGTCCACCAAAACTCTAA+TGG | 0.440326 | 7.2:+43994772 | None:intergenic |
ACTTAATGATGTGGAGGAAA+TGG | 0.448325 | 7.2:-43993472 | MS.gene46002:CDS |
AAAGGAAGAATCTGACGAAA+TGG | 0.451310 | 7.2:-43993946 | MS.gene46002:CDS |
TGAGCTCAGAAAAGTGCTTA+AGG | 0.457575 | 7.2:-43993746 | MS.gene46002:CDS |
TCTATTTGCTGAGGCAGATA+AGG | 0.457603 | 7.2:-43994735 | MS.gene46002:CDS |
TACCAATATTAACCTCCATT+CGG | 0.462117 | 7.2:+43993973 | None:intergenic |
CACATTGTGTACCAACAATC+TGG | 0.462685 | 7.2:+43992216 | None:intergenic |
CAGAAATAACGTCACTTACA+AGG | 0.471169 | 7.2:-43992172 | MS.gene46002:CDS |
CTTACCTTATAATCGTTACA+AGG | 0.487269 | 7.2:+43993645 | None:intergenic |
ACTCCAATGCCATCCATTGA+TGG | 0.490084 | 7.2:-43993525 | MS.gene46002:CDS |
GGTTAATATTGGTAAAGAAA+AGG | 0.492157 | 7.2:-43993964 | MS.gene46002:CDS |
ATTTCCTCCACATCATTAAG+TGG | 0.492887 | 7.2:+43993474 | None:intergenic |
AGGAATCAGAAATGTATTTG+TGG | 0.500975 | 7.2:-43994398 | MS.gene46002:CDS |
GCATTGGAGTCACAACCAAC+TGG | 0.508849 | 7.2:+43993538 | None:intergenic |
CAAGACCAAGGCCAGATTGT+TGG | 0.515955 | 7.2:-43992227 | MS.gene46002:CDS |
CATCCAGCAGTATCATCATT+AGG | 0.516253 | 7.2:+43992302 | None:intergenic |
GATCTTGTTTATTGAAGCAG+AGG | 0.517035 | 7.2:-43993889 | MS.gene46002:CDS |
CAGCCTAATGATGATACTGC+TGG | 0.517497 | 7.2:-43992305 | MS.gene46002:CDS |
TTTCTCACCTTTCCCTTGGG+AGG | 0.518315 | 7.2:-43993840 | MS.gene46002:CDS |
TAACCTCCATTCGGTTACTT+GGG | 0.521189 | 7.2:+43993982 | None:intergenic |
GTGTACCAACAATCTGGCCT+TGG | 0.521461 | 7.2:+43992222 | None:intergenic |
TCAGACTGTACGGAAATGCT+TGG | 0.527859 | 7.2:+43993693 | None:intergenic |
TATCAACATCACCAAGAAAG+AGG | 0.532453 | 7.2:-43994192 | MS.gene46002:intron |
CTTGTTCTCACAGCAGAAGT+AGG | 0.541416 | 7.2:+43994460 | None:intergenic |
ATACCATCAATGGATGGCAT+TGG | 0.542259 | 7.2:+43993522 | None:intergenic |
TTATAATCGTTACAAGGTAT+CGG | 0.556667 | 7.2:+43993651 | None:intergenic |
CATTGACTCCAAGCTTCTGA+AGG | 0.561296 | 7.2:+43994246 | None:intergenic |
AATGATGATACTGCTGGATG+TGG | 0.562722 | 7.2:-43992299 | MS.gene46002:CDS |
TTTAGTCCCAAGTAACCGAA+TGG | 0.566006 | 7.2:-43993988 | MS.gene46002:CDS |
CAACACTCCTCCCAAGGGAA+AGG | 0.566939 | 7.2:+43993833 | None:intergenic |
ATCAATCCAAGAAACTCAGC+AGG | 0.567136 | 7.2:-43994536 | MS.gene46002:CDS |
ACTAACCAATGAACTGGTTG+AGG | 0.567961 | 7.2:+43993285 | None:intergenic |
AGCATATCCTCCAGAAATAG+GGG | 0.573043 | 7.2:+43993590 | None:intergenic |
CTCAGCAAAACAAGTAGACA+AGG | 0.581182 | 7.2:-43994798 | MS.gene46002:CDS |
TCTCACAGCAGAAGTAGGAC+TGG | 0.581921 | 7.2:+43994465 | None:intergenic |
GTTCGTGAGTTCAGACTGTA+CGG | 0.583858 | 7.2:+43993683 | None:intergenic |
CATATGCAACACTCCTCCCA+AGG | 0.586923 | 7.2:+43993827 | None:intergenic |
TATGAAATACCATCAATGGA+TGG | 0.601386 | 7.2:+43993516 | None:intergenic |
AAATAAAGTTCTATTTGCTG+AGG | 0.602370 | 7.2:-43994744 | MS.gene46002:CDS |
GTTTATGGTGACAGACCAGT+TGG | 0.602694 | 7.2:-43993553 | MS.gene46002:CDS |
AGGGACCATTGCAAAACTTG+TGG | 0.604088 | 7.2:-43994672 | MS.gene46002:CDS |
CGTTAATATTGGCCAGAAGG+AGG | 0.604404 | 7.2:-43993448 | MS.gene46002:intron |
GGTCGTTAATATTGGCCAGA+AGG | 0.607810 | 7.2:-43993451 | MS.gene46002:CDS |
GAACGTCCCACTTAATGATG+TGG | 0.609331 | 7.2:-43993481 | MS.gene46002:CDS |
ACAGCAGAAGTAGGACTGGA+AGG | 0.610171 | 7.2:+43994469 | None:intergenic |
AAGCTTGGAGTCAATGACAT+TGG | 0.612687 | 7.2:-43994239 | MS.gene46002:CDS |
CGTCCCACTTAATGATGTGG+AGG | 0.619494 | 7.2:-43993478 | MS.gene46002:CDS |
TTAAATATAAAGTCTGACAG+AGG | 0.620186 | 7.2:+43994032 | None:intergenic |
AACCAAATCTATGTTGATGG+TGG | 0.623412 | 7.2:-43992117 | MS.gene46002:CDS |
TTTCCTCCACATCATTAAGT+GGG | 0.624477 | 7.2:+43993475 | None:intergenic |
CCTAAATCCCCTATTTCTGG+AGG | 0.628731 | 7.2:-43993597 | MS.gene46002:CDS |
AGTCCCAAGTAACCGAATGG+AGG | 0.634833 | 7.2:-43993985 | MS.gene46002:CDS |
GGAGTGTTGCATATGCTCGA+AGG | 0.640903 | 7.2:-43993819 | MS.gene46002:CDS |
GTTGGCAATCAAGCATATTG+TGG | 0.641007 | 7.2:+43992070 | None:intergenic |
ATATGCAACACTCCTCCCAA+GGG | 0.663884 | 7.2:+43993828 | None:intergenic |
ATGTGTTGAATGTTGCAAGA+AGG | 0.665559 | 7.2:-43992198 | MS.gene46002:CDS |
AAAGTTGAAGGTCAAGACCA+AGG | 0.676584 | 7.2:-43992239 | MS.gene46002:CDS |
TCTATGGTCACAGACATGCA+AGG | 0.694458 | 7.2:-43994567 | MS.gene46002:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | TTTTGTTATAATTATTATGT+AGG | + | chr7.2:43993638-43993657 | None:intergenic | 10.0% |
!! | AAAAAATCAACAAAAGTTGA+AGG | - | chr7.2:43994619-43994638 | MS.gene46002:CDS | 20.0% |
!! | AAACAAGTTATTAGTTAGAA+TGG | + | chr7.2:43994531-43994550 | None:intergenic | 20.0% |
!! | AACAAGTTATTAGTTAGAAT+GGG | + | chr7.2:43994530-43994549 | None:intergenic | 20.0% |
!! | AATACATGAATTTGGTAAAA+AGG | + | chr7.2:43994283-43994302 | None:intergenic | 20.0% |
!! | ATCTTGATGAAAAATATCTA+TGG | - | chr7.2:43992287-43992306 | MS.gene46002:CDS | 20.0% |
!! | GTGATAAAAATACATGAATT+TGG | + | chr7.2:43994291-43994310 | None:intergenic | 20.0% |
!! | TAACGATAATTATATAACTG+AGG | + | chr7.2:43994327-43994346 | None:intergenic | 20.0% |
!! | TATAATTATTATGTAGGATG+AGG | + | chr7.2:43993632-43993651 | None:intergenic | 20.0% |
!!! | ATTTTTGTGTTTGAAATATG+TGG | - | chr7.2:43994133-43994152 | MS.gene46002:intron | 20.0% |
!!! | TAATGAAATTGGTTTTGTTA+AGG | - | chr7.2:43992531-43992550 | MS.gene46002:intron | 20.0% |
! | AAGATATGAAATACCATCAA+TGG | + | chr7.2:43993361-43993380 | None:intergenic | 25.0% |
! | CAAACACAAAAATAGAAACA+TGG | + | chr7.2:43994126-43994145 | None:intergenic | 25.0% |
! | CAATTTCATTACTCAAATTC+TGG | + | chr7.2:43992522-43992541 | None:intergenic | 25.0% |
! | CAGAATTTGAGTAATGAAAT+TGG | - | chr7.2:43992520-43992539 | MS.gene46002:intron | 25.0% |
! | GGTTAATATTGGTAAAGAAA+AGG | - | chr7.2:43992906-43992925 | MS.gene46002:intron | 25.0% |
! | TAAATTATCAATGCAGCTTA+TGG | + | chr7.2:43993085-43993104 | None:intergenic | 25.0% |
! | TAGAAAAAGAAGAGAAGTAA+AGG | - | chr7.2:43993914-43993933 | MS.gene46002:CDS | 25.0% |
! | TGAACATGCACATATAATAA+AGG | + | chr7.2:43994014-43994033 | None:intergenic | 25.0% |
! | TTAAATATAAAGTCTGACAG+AGG | + | chr7.2:43992841-43992860 | None:intergenic | 25.0% |
! | TTATAATCGTTACAAGGTAT+CGG | + | chr7.2:43993222-43993241 | None:intergenic | 25.0% |
! | TTATCGTTATTTATGTGACA+AGG | - | chr7.2:43994338-43994357 | MS.gene46002:CDS | 25.0% |
! | TTATTATATGTGCATGTTCA+TGG | - | chr7.2:43994014-43994033 | MS.gene46002:CDS | 25.0% |
!! | AAATAAAGTTCTATTTGCTG+AGG | - | chr7.2:43992126-43992145 | MS.gene46002:CDS | 25.0% |
!! | TCAAAATTTGCTTTGACAAA+CGG | - | chr7.2:43993562-43993581 | MS.gene46002:CDS | 25.0% |
!! | TTTTTCATTGCTCTTAATCT+TGG | + | chr7.2:43994731-43994750 | None:intergenic | 25.0% |
AAAGTTGTCGTAACAACATT+TGG | + | chr7.2:43992598-43992617 | None:intergenic | 30.0% | |
AAGAAAAGATACCTCTTTCT+TGG | + | chr7.2:43992692-43992711 | None:intergenic | 30.0% | |
AATACTGTGTAAGTTTCTTC+AGG | - | chr7.2:43992452-43992471 | MS.gene46002:intron | 30.0% | |
AATGAATGGTACCCATATAT+GGG | - | chr7.2:43993815-43993834 | MS.gene46002:CDS | 30.0% | |
AGGAATCAGAAATGTATTTG+TGG | - | chr7.2:43992472-43992491 | MS.gene46002:intron | 30.0% | |
ATATGAACATCCCCATATAT+GGG | + | chr7.2:43993829-43993848 | None:intergenic | 30.0% | |
ATCAACCAAATCTATGTTGA+TGG | - | chr7.2:43994750-43994769 | MS.gene46002:CDS | 30.0% | |
ATGGAAGTTTAATAGATCCA+TGG | + | chr7.2:43994497-43994516 | None:intergenic | 30.0% | |
CAACCACAAGAAATCAAATA+TGG | + | chr7.2:43993509-43993528 | None:intergenic | 30.0% | |
CAATGTTCAGTTTCATATTC+TGG | + | chr7.2:43992369-43992388 | None:intergenic | 30.0% | |
CGATAATTATATAACTGAGG+TGG | + | chr7.2:43994324-43994343 | None:intergenic | 30.0% | |
CTAATAAGACATGACAATAG+AGG | + | chr7.2:43994244-43994263 | None:intergenic | 30.0% | |
CTCACTAATTCTTCAATATG+TGG | - | chr7.2:43992767-43992786 | MS.gene46002:intron | 30.0% | |
CTTACCTTATAATCGTTACA+AGG | + | chr7.2:43993228-43993247 | None:intergenic | 30.0% | |
CTTCAATATGTGGTTTGAAT+AGG | - | chr7.2:43992777-43992796 | MS.gene46002:intron | 30.0% | |
GATACCTTGTAACGATTATA+AGG | - | chr7.2:43993221-43993240 | MS.gene46002:intron | 30.0% | |
TACCAATATTAACCTCCATT+CGG | + | chr7.2:43992900-43992919 | None:intergenic | 30.0% | |
TACTATACTAACCAATGAAC+TGG | + | chr7.2:43993594-43993613 | None:intergenic | 30.0% | |
TACTTCTTGAGAAAGACTAA+GGG | - | chr7.2:43994209-43994228 | MS.gene46002:CDS | 30.0% | |
TAGTACTACACATAACAAGT+CGG | + | chr7.2:43993778-43993797 | None:intergenic | 30.0% | |
TATGAAATACCATCAATGGA+TGG | + | chr7.2:43993357-43993376 | None:intergenic | 30.0% | |
TGATCTTCTCAAATTGTCTT+TGG | - | chr7.2:43992804-43992823 | MS.gene46002:CDS | 30.0% | |
TTACTTCTTGAGAAAGACTA+AGG | - | chr7.2:43994208-43994227 | MS.gene46002:CDS | 30.0% | |
! | GTAACAACTGATTCAATATC+TGG | + | chr7.2:43994449-43994468 | None:intergenic | 30.0% |
! | GTTTGTCAAAGCAAATTTTG+AGG | + | chr7.2:43993563-43993582 | None:intergenic | 30.0% |
! | TCACCATATTTGATTTCTTG+TGG | - | chr7.2:43993503-43993522 | MS.gene46002:CDS | 30.0% |
! | TGTGTAGTACTAATTTTCCA+TGG | - | chr7.2:43993786-43993805 | MS.gene46002:CDS | 30.0% |
! | TTCTACCTTTTGCATCTTTA+GGG | + | chr7.2:43994085-43994104 | None:intergenic | 30.0% |
! | TTTCTACCTTTTGCATCTTT+AGG | + | chr7.2:43994086-43994105 | None:intergenic | 30.0% |
!! | AAATGCTTGGATTAGTTAGT+AGG | + | chr7.2:43993167-43993186 | None:intergenic | 30.0% |
!! | CTTGGTGATGTTGATATTAA+CGG | + | chr7.2:43992674-43992693 | None:intergenic | 30.0% |
!! | TCAAATTCTGGAATTCTTCT+CGG | + | chr7.2:43992510-43992529 | None:intergenic | 30.0% |
!!! | GTTGATTTTTTGTTGTCTGA+AGG | + | chr7.2:43994610-43994629 | None:intergenic | 30.0% |
!!! | TGGTTTTGTTAAGGAAATGT+CGG | - | chr7.2:43992540-43992559 | MS.gene46002:intron | 30.0% |
AAAGGAAGAATCTGACGAAA+TGG | - | chr7.2:43992924-43992943 | MS.gene46002:intron | 35.0% | |
AACCACCATCAACATAGATT+TGG | + | chr7.2:43994758-43994777 | None:intergenic | 35.0% | |
AACCGAATGGAGGTTAATAT+TGG | - | chr7.2:43992895-43992914 | MS.gene46002:intron | 35.0% | |
ACTTAATGATGTGGAGGAAA+TGG | - | chr7.2:43993398-43993417 | MS.gene46002:intron | 35.0% | |
ACTTCTTGAGAAAGACTAAG+GGG | - | chr7.2:43994210-43994229 | MS.gene46002:CDS | 35.0% | |
AGGAAGAAAGATTGAACGAA+AGG | - | chr7.2:43993934-43993953 | MS.gene46002:CDS | 35.0% | |
ATCAGTTGTTACTGAATGAG+AGG | - | chr7.2:43994457-43994476 | MS.gene46002:CDS | 35.0% | |
ATGAATGGTACCCATATATG+GGG | - | chr7.2:43993816-43993835 | MS.gene46002:CDS | 35.0% | |
ATGTGTTGAATGTTGCAAGA+AGG | - | chr7.2:43994672-43994691 | MS.gene46002:CDS | 35.0% | |
ATTTCCTCCACATCATTAAG+TGG | + | chr7.2:43993399-43993418 | None:intergenic | 35.0% | |
CAATGAATGGTACCCATATA+TGG | - | chr7.2:43993814-43993833 | MS.gene46002:CDS | 35.0% | |
CAGAAATAACGTCACTTACA+AGG | - | chr7.2:43994698-43994717 | MS.gene46002:CDS | 35.0% | |
CATATGAACATCCCCATATA+TGG | + | chr7.2:43993830-43993849 | None:intergenic | 35.0% | |
CATATGATCTTAGGGTAATG+AGG | - | chr7.2:43993844-43993863 | MS.gene46002:CDS | 35.0% | |
GAGGAAATGGTCGTTAATAT+TGG | - | chr7.2:43993411-43993430 | MS.gene46002:intron | 35.0% | |
GGGATGTTCATATGATCTTA+GGG | - | chr7.2:43993836-43993855 | MS.gene46002:CDS | 35.0% | |
TACCATTCATTGCATTTCCA+TGG | + | chr7.2:43993806-43993825 | None:intergenic | 35.0% | |
TAGCATATCCTCCAGAAATA+GGG | + | chr7.2:43993284-43993303 | None:intergenic | 35.0% | |
TAGTTAGAATGGGAGAATGA+GGG | + | chr7.2:43994520-43994539 | None:intergenic | 35.0% | |
TATCAACATCACCAAGAAAG+AGG | - | chr7.2:43992678-43992697 | MS.gene46002:intron | 35.0% | |
TCAGTTGTTACTGAATGAGA+GGG | - | chr7.2:43994458-43994477 | MS.gene46002:CDS | 35.0% | |
TCTGTCACCATAAACGTTAA+TGG | + | chr7.2:43993312-43993331 | None:intergenic | 35.0% | |
TTAAATCTCCTTCAGAAGCT+TGG | - | chr7.2:43992616-43992635 | MS.gene46002:intron | 35.0% | |
TTAGTTAGAATGGGAGAATG+AGG | + | chr7.2:43994521-43994540 | None:intergenic | 35.0% | |
TTCCATGGAAATGCAATGAA+TGG | - | chr7.2:43993801-43993820 | MS.gene46002:CDS | 35.0% | |
TTTCCTCCACATCATTAAGT+GGG | + | chr7.2:43993398-43993417 | None:intergenic | 35.0% | |
! | AACCAAATCTATGTTGATGG+TGG | - | chr7.2:43994753-43994772 | MS.gene46002:CDS | 35.0% |
! | ATTAGCCACAAGTTTTGCAA+TGG | + | chr7.2:43992206-43992225 | None:intergenic | 35.0% |
! | ATTTGATTTCTTGTGGTTGC+AGG | - | chr7.2:43993510-43993529 | MS.gene46002:CDS | 35.0% |
! | CAAGGTTACCATTAGAGTTT+TGG | - | chr7.2:43992090-43992109 | MS.gene46002:CDS | 35.0% |
! | GATCTTGTTTATTGAAGCAG+AGG | - | chr7.2:43992981-43993000 | MS.gene46002:intron | 35.0% |
! | TAGAGCACCATTAACGTTTA+TGG | - | chr7.2:43993302-43993321 | MS.gene46002:CDS | 35.0% |
! | TCTACCTTTTGCATCTTTAG+GGG | + | chr7.2:43994084-43994103 | None:intergenic | 35.0% |
! | TTTGATTTCTTGTGGTTGCA+GGG | - | chr7.2:43993511-43993530 | MS.gene46002:CDS | 35.0% |
!! | AATATTGAAGCACTGAGCTT+TGG | - | chr7.2:43992232-43992251 | MS.gene46002:CDS | 35.0% |
!! | TACAAGGTATCGGTAATATC+TGG | + | chr7.2:43993212-43993231 | None:intergenic | 35.0% |
!!! | ATGTAGGATGAGGTTTTGTT+TGG | + | chr7.2:43993622-43993641 | None:intergenic | 35.0% |
AAAGTTGAAGGTCAAGACCA+AGG | - | chr7.2:43994631-43994650 | MS.gene46002:CDS | 40.0% | |
AAGCTTGGAGTCAATGACAT+TGG | - | chr7.2:43992631-43992650 | MS.gene46002:intron | 40.0% | |
AATGATGATACTGCTGGATG+TGG | - | chr7.2:43994571-43994590 | MS.gene46002:CDS | 40.0% | |
ACTAACCAATGAACTGGTTG+AGG | + | chr7.2:43993588-43993607 | None:intergenic | 40.0% | |
AGCATATCCTCCAGAAATAG+GGG | + | chr7.2:43993283-43993302 | None:intergenic | 40.0% | |
AGCTTCTTAACATTGCGCTT+AGG | - | chr7.2:43992178-43992197 | MS.gene46002:CDS | 40.0% | |
ATACCATCAATGGATGGCAT+TGG | + | chr7.2:43993351-43993370 | None:intergenic | 40.0% | |
ATCAATCCAAGAAACTCAGC+AGG | - | chr7.2:43992334-43992353 | MS.gene46002:intron | 40.0% | |
CACATTGTGTACCAACAATC+TGG | + | chr7.2:43994657-43994676 | None:intergenic | 40.0% | |
CATCCAGCAGTATCATCATT+AGG | + | chr7.2:43994571-43994590 | None:intergenic | 40.0% | |
CTAGCATATCCTCCAGAAAT+AGG | + | chr7.2:43993285-43993304 | None:intergenic | 40.0% | |
CTCAGCAAAACAAGTAGACA+AGG | - | chr7.2:43992072-43992091 | MS.gene46002:CDS | 40.0% | |
CTTGTCCACCAAAACTCTAA+TGG | + | chr7.2:43992101-43992120 | None:intergenic | 40.0% | |
GAGAACAAGACTTGCAGAAT+TGG | - | chr7.2:43992424-43992443 | MS.gene46002:intron | 40.0% | |
GATCCTAAATCCCCTATTTC+TGG | - | chr7.2:43993270-43993289 | MS.gene46002:intron | 40.0% | |
GCTTCTTAACATTGCGCTTA+GGG | - | chr7.2:43992179-43992198 | MS.gene46002:CDS | 40.0% | |
GGGGATGTTCATATGATCTT+AGG | - | chr7.2:43993835-43993854 | MS.gene46002:CDS | 40.0% | |
GTAACCACCTCTTATGTGTT+CGG | - | chr7.2:43993746-43993765 | MS.gene46002:CDS | 40.0% | |
GTTACTACCGAACACATAAG+AGG | + | chr7.2:43993756-43993775 | None:intergenic | 40.0% | |
GTTGGCAATCAAGCATATTG+TGG | + | chr7.2:43994803-43994822 | None:intergenic | 40.0% | |
TAACCTCCATTCGGTTACTT+GGG | + | chr7.2:43992891-43992910 | None:intergenic | 40.0% | |
TATATGTGCATGTTCATGGC+AGG | - | chr7.2:43994018-43994037 | MS.gene46002:CDS | 40.0% | |
TTAACCTCCATTCGGTTACT+TGG | + | chr7.2:43992892-43992911 | None:intergenic | 40.0% | |
TTTAGTCCCAAGTAACCGAA+TGG | - | chr7.2:43992882-43992901 | MS.gene46002:intron | 40.0% | |
! | AGTTTTCTCACCTTTCCCTT+GGG | - | chr7.2:43993027-43993046 | MS.gene46002:intron | 40.0% |
! | CTACCTTTTGCATCTTTAGG+GGG | + | chr7.2:43994083-43994102 | None:intergenic | 40.0% |
! | TAGTTTTCTCACCTTTCCCT+TGG | - | chr7.2:43993026-43993045 | MS.gene46002:intron | 40.0% |
! | TCTATTTGCTGAGGCAGATA+AGG | - | chr7.2:43992135-43992154 | MS.gene46002:CDS | 40.0% |
!! | GGTTACCATTAGAGTTTTGG+TGG | - | chr7.2:43992093-43992112 | MS.gene46002:CDS | 40.0% |
!! | TGAGCTCAGAAAAGTGCTTA+AGG | - | chr7.2:43993124-43993143 | MS.gene46002:intron | 40.0% |
!!! | CTTGTCTACTTGTTTTGCTG+AGG | + | chr7.2:43992074-43992093 | None:intergenic | 40.0% |
AATAGATCCATGGTCACCCA+TGG | + | chr7.2:43994487-43994506 | None:intergenic | 45.0% | |
ACTACCGAACACATAAGAGG+TGG | + | chr7.2:43993753-43993772 | None:intergenic | 45.0% | |
ACTCCAATGCCATCCATTGA+TGG | - | chr7.2:43993345-43993364 | MS.gene46002:intron | 45.0% | |
AGGGACCATTGCAAAACTTG+TGG | - | chr7.2:43992198-43992217 | MS.gene46002:CDS | 45.0% | |
ATATGCAACACTCCTCCCAA+GGG | + | chr7.2:43993045-43993064 | None:intergenic | 45.0% | |
ATTGGCCAGAAGGAGGTAAA+AGG | - | chr7.2:43993429-43993448 | MS.gene46002:intron | 45.0% | |
CAGCCTAATGATGATACTGC+TGG | - | chr7.2:43994565-43994584 | MS.gene46002:CDS | 45.0% | |
CCTCCAGAAATAGGGGATTT+AGG | + | chr7.2:43993276-43993295 | None:intergenic | 45.0% | |
CGTTAATATTGGCCAGAAGG+AGG | - | chr7.2:43993422-43993441 | MS.gene46002:intron | 45.0% | |
CTTGTTCTCACAGCAGAAGT+AGG | + | chr7.2:43992413-43992432 | None:intergenic | 45.0% | |
GAACGTCCCACTTAATGATG+TGG | - | chr7.2:43993389-43993408 | MS.gene46002:intron | 45.0% | |
GGTCGTTAATATTGGCCAGA+AGG | - | chr7.2:43993419-43993438 | MS.gene46002:intron | 45.0% | |
GTTCGTGAGTTCAGACTGTA+CGG | + | chr7.2:43993190-43993209 | None:intergenic | 45.0% | |
GTTTATGGTGACAGACCAGT+TGG | - | chr7.2:43993317-43993336 | MS.gene46002:CDS | 45.0% | |
TAGAATGGGAGAATGAGGGA+TGG | + | chr7.2:43994516-43994535 | None:intergenic | 45.0% | |
TAGCCCCCTAAAGATGCAAA+AGG | - | chr7.2:43994077-43994096 | MS.gene46002:intron | 45.0% | |
TCAGACTGTACGGAAATGCT+TGG | + | chr7.2:43993180-43993199 | None:intergenic | 45.0% | |
TCTATGGTCACAGACATGCA+AGG | - | chr7.2:43992303-43992322 | MS.gene46002:CDS | 45.0% | |
TTGGCCAGAAGGAGGTAAAA+GGG | - | chr7.2:43993430-43993449 | MS.gene46002:intron | 45.0% | |
! | AGATTGAACGAAAGGTGCGA+AGG | - | chr7.2:43993942-43993961 | MS.gene46002:CDS | 45.0% |
!! | CATTGACTCCAAGCTTCTGA+AGG | + | chr7.2:43992627-43992646 | None:intergenic | 45.0% |
!! | CCTAAATCCCCTATTTCTGG+AGG | - | chr7.2:43993273-43993292 | MS.gene46002:intron | 45.0% |
AACGGCCTCAACCAGTTCAT+TGG | - | chr7.2:43993580-43993599 | MS.gene46002:CDS | 50.0% | |
ACAGCAGAAGTAGGACTGGA+AGG | + | chr7.2:43992404-43992423 | None:intergenic | 50.0% | |
ACTGAATGAGAGGGAAGCCA+TGG | - | chr7.2:43994467-43994486 | MS.gene46002:CDS | 50.0% | |
AGTCCCAAGTAACCGAATGG+AGG | - | chr7.2:43992885-43992904 | MS.gene46002:intron | 50.0% | |
CAAGACCAAGGCCAGATTGT+TGG | - | chr7.2:43994643-43994662 | MS.gene46002:CDS | 50.0% | |
CATATGCAACACTCCTCCCA+AGG | + | chr7.2:43993046-43993065 | None:intergenic | 50.0% | |
CGTCCCACTTAATGATGTGG+AGG | - | chr7.2:43993392-43993411 | MS.gene46002:intron | 50.0% | |
CTGAATGAGAGGGAAGCCAT+GGG | - | chr7.2:43994468-43994487 | MS.gene46002:CDS | 50.0% | |
GCATTGGAGTCACAACCAAC+TGG | + | chr7.2:43993335-43993354 | None:intergenic | 50.0% | |
GGCAGGAAGTAGATCTGTTC+AGG | - | chr7.2:43994035-43994054 | MS.gene46002:CDS | 50.0% | |
GTGTACCAACAATCTGGCCT+TGG | + | chr7.2:43994651-43994670 | None:intergenic | 50.0% | |
TCTCACAGCAGAAGTAGGAC+TGG | + | chr7.2:43992408-43992427 | None:intergenic | 50.0% | |
TGAGCACCTGCTGAGTTTCT+TGG | + | chr7.2:43992343-43992362 | None:intergenic | 50.0% | |
TTTCTCACCTTTCCCTTGGG+AGG | - | chr7.2:43993030-43993049 | MS.gene46002:intron | 50.0% | |
! | CAGTCCCTTTTACCTCCTTC+TGG | + | chr7.2:43993437-43993456 | None:intergenic | 50.0% |
!! | GGAGTGTTGCATATGCTCGA+AGG | - | chr7.2:43993051-43993070 | MS.gene46002:intron | 50.0% |
CAACACTCCTCCCAAGGGAA+AGG | + | chr7.2:43993040-43993059 | None:intergenic | 55.0% | |
AGGGAAGCCATGGGTGACCA+TGG | - | chr7.2:43994477-43994496 | MS.gene46002:CDS | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr7.2 | gene | 43992058 | 43994834 | 43992058 | ID=MS.gene46002 |
chr7.2 | mRNA | 43992058 | 43994834 | 43992058 | ID=MS.gene46002.t1;Parent=MS.gene46002 |
chr7.2 | exon | 43994193 | 43994834 | 43994193 | ID=MS.gene46002.t1.exon1;Parent=MS.gene46002.t1 |
chr7.2 | CDS | 43994193 | 43994834 | 43994193 | ID=cds.MS.gene46002.t1;Parent=MS.gene46002.t1 |
chr7.2 | exon | 43993449 | 43994093 | 43993449 | ID=MS.gene46002.t1.exon2;Parent=MS.gene46002.t1 |
chr7.2 | CDS | 43993449 | 43994093 | 43993449 | ID=cds.MS.gene46002.t1;Parent=MS.gene46002.t1 |
chr7.2 | exon | 43993291 | 43993360 | 43993291 | ID=MS.gene46002.t1.exon3;Parent=MS.gene46002.t1 |
chr7.2 | CDS | 43993291 | 43993360 | 43993291 | ID=cds.MS.gene46002.t1;Parent=MS.gene46002.t1 |
chr7.2 | exon | 43992794 | 43992852 | 43992794 | ID=MS.gene46002.t1.exon4;Parent=MS.gene46002.t1 |
chr7.2 | CDS | 43992794 | 43992852 | 43992794 | ID=cds.MS.gene46002.t1;Parent=MS.gene46002.t1 |
chr7.2 | exon | 43992058 | 43992324 | 43992058 | ID=MS.gene46002.t1.exon5;Parent=MS.gene46002.t1 |
chr7.2 | CDS | 43992058 | 43992324 | 43992058 | ID=cds.MS.gene46002.t1;Parent=MS.gene46002.t1 |
Gene Sequence |
Protein sequence |