Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene84589.t1 | XP_013449064.1 | 80.2 | 475 | 91 | 2 | 1 | 474 | 1 | 473 | 2.60E-203 | 718.4 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene84589.t1 | A0A072U0X9 | 80.2 | 475 | 91 | 2 | 1 | 474 | 1 | 473 | 1.9e-203 | 718.4 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene84589.t1 | MTR_7g066340 | 80.211 | 475 | 91 | 2 | 1 | 474 | 1 | 473 | 0.0 | 756 |
MS.gene84589.t1 | MTR_7g066310 | 67.811 | 466 | 84 | 3 | 9 | 474 | 4 | 403 | 0.0 | 601 |
MS.gene84589.t1 | MTR_7g066280 | 70.276 | 434 | 55 | 3 | 91 | 474 | 1 | 410 | 0.0 | 570 |
MS.gene84589.t1 | MTR_7g066350 | 63.326 | 469 | 150 | 9 | 1 | 458 | 1 | 458 | 0.0 | 555 |
MS.gene84589.t1 | MTR_1g041315 | 61.470 | 449 | 150 | 7 | 7 | 438 | 9 | 451 | 0.0 | 528 |
MS.gene84589.t1 | MTR_7g066260 | 58.491 | 477 | 175 | 10 | 6 | 468 | 9 | 476 | 1.09e-178 | 513 |
MS.gene84589.t1 | MTR_7g066570 | 52.372 | 548 | 200 | 13 | 3 | 512 | 5 | 529 | 5.93e-167 | 486 |
MS.gene84589.t1 | MTR_7g066400 | 54.777 | 471 | 156 | 9 | 1 | 451 | 1 | 434 | 1.01e-161 | 469 |
MS.gene84589.t1 | MTR_7g066360 | 54.968 | 473 | 186 | 10 | 6 | 468 | 8 | 463 | 6.57e-150 | 440 |
MS.gene84589.t1 | MTR_7g012680 | 51.797 | 473 | 187 | 9 | 3 | 460 | 5 | 451 | 8.43e-145 | 426 |
MS.gene84589.t1 | MTR_7g066290 | 53.913 | 460 | 168 | 11 | 6 | 455 | 9 | 434 | 7.65e-143 | 420 |
MS.gene84589.t1 | MTR_7g058710 | 50.000 | 496 | 187 | 12 | 1 | 454 | 1 | 477 | 4.83e-142 | 420 |
MS.gene84589.t1 | MTR_7g066580 | 45.749 | 494 | 170 | 12 | 18 | 460 | 1 | 447 | 4.61e-124 | 372 |
MS.gene84589.t1 | MTR_7g066580 | 28.516 | 256 | 138 | 10 | 4 | 235 | 207 | 441 | 1.55e-13 | 73.2 |
MS.gene84589.t1 | MTR_7g058700 | 48.222 | 450 | 155 | 9 | 24 | 454 | 531 | 921 | 1.25e-116 | 368 |
MS.gene84589.t1 | MTR_7g066410 | 40.748 | 508 | 231 | 11 | 12 | 454 | 10 | 512 | 1.44e-113 | 348 |
MS.gene84589.t1 | MTR_2g029400 | 44.492 | 472 | 151 | 10 | 6 | 442 | 8 | 403 | 7.49e-110 | 334 |
MS.gene84589.t1 | MTR_7g066430 | 41.020 | 490 | 234 | 9 | 12 | 454 | 4 | 485 | 1.13e-108 | 335 |
MS.gene84589.t1 | MTR_7g066480 | 40.220 | 455 | 217 | 9 | 11 | 456 | 15 | 423 | 1.26e-95 | 298 |
MS.gene84589.t1 | MTR_7g066490 | 42.282 | 447 | 203 | 12 | 12 | 456 | 16 | 409 | 2.65e-95 | 297 |
MS.gene84589.t1 | MTR_7g062280 | 36.581 | 503 | 252 | 14 | 1 | 454 | 1 | 485 | 3.31e-88 | 281 |
MS.gene84589.t1 | MTR_7g062300 | 37.214 | 481 | 259 | 13 | 1 | 450 | 1 | 469 | 1.52e-86 | 276 |
MS.gene84589.t1 | MTR_7g063820 | 37.827 | 497 | 247 | 14 | 1 | 454 | 1 | 478 | 7.52e-85 | 272 |
MS.gene84589.t1 | MTR_7g063660 | 35.366 | 492 | 250 | 15 | 7 | 454 | 4 | 471 | 1.49e-83 | 269 |
MS.gene84589.t1 | MTR_7g063900 | 39.754 | 488 | 234 | 17 | 12 | 454 | 10 | 482 | 8.22e-81 | 262 |
MS.gene84589.t1 | MTR_4g019310 | 36.527 | 501 | 246 | 14 | 6 | 450 | 2 | 486 | 6.26e-80 | 260 |
MS.gene84589.t1 | MTR_7g063880 | 36.701 | 485 | 255 | 15 | 1 | 455 | 1 | 463 | 7.40e-79 | 256 |
MS.gene84589.t1 | MTR_7g063830 | 36.247 | 469 | 253 | 11 | 1 | 454 | 1 | 438 | 1.29e-78 | 255 |
MS.gene84589.t1 | MTR_7g063920 | 34.937 | 478 | 239 | 10 | 1 | 454 | 1 | 430 | 8.46e-75 | 244 |
MS.gene84589.t1 | MTR_7g063840 | 34.694 | 490 | 261 | 14 | 1 | 454 | 1 | 467 | 1.00e-74 | 245 |
MS.gene84589.t1 | MTR_7g063890 | 38.037 | 489 | 242 | 15 | 11 | 454 | 26 | 498 | 1.14e-74 | 246 |
MS.gene84589.t1 | MTR_7g063890 | 25.225 | 222 | 131 | 7 | 260 | 448 | 23 | 242 | 7.25e-14 | 74.7 |
MS.gene84589.t1 | MTR_3g007740 | 36.752 | 468 | 239 | 15 | 11 | 454 | 8 | 442 | 1.58e-74 | 244 |
MS.gene84589.t1 | MTR_3g065200 | 36.170 | 470 | 200 | 16 | 10 | 441 | 1 | 408 | 4.01e-73 | 241 |
MS.gene84589.t1 | MTR_4g017830 | 33.208 | 530 | 271 | 17 | 1 | 465 | 1 | 512 | 6.04e-72 | 240 |
MS.gene84589.t1 | MTR_4g017440 | 33.135 | 504 | 259 | 14 | 13 | 454 | 15 | 502 | 6.49e-70 | 234 |
MS.gene84589.t1 | MTR_4g017440 | 25.379 | 264 | 145 | 7 | 259 | 475 | 9 | 267 | 2.37e-11 | 66.6 |
MS.gene84589.t1 | MTR_7g066680 | 45.819 | 299 | 99 | 5 | 216 | 451 | 37 | 335 | 1.52e-68 | 225 |
MS.gene84589.t1 | MTR_7g066680 | 27.523 | 218 | 142 | 8 | 6 | 218 | 80 | 286 | 1.93e-11 | 66.2 |
MS.gene84589.t1 | MTR_4g019340 | 33.056 | 481 | 257 | 11 | 13 | 444 | 39 | 503 | 2.79e-68 | 229 |
MS.gene84589.t1 | MTR_4g019340 | 27.273 | 220 | 137 | 6 | 12 | 228 | 303 | 502 | 1.42e-11 | 67.4 |
MS.gene84589.t1 | MTR_7g063670 | 34.716 | 458 | 261 | 11 | 13 | 454 | 16 | 451 | 2.95e-64 | 217 |
MS.gene84589.t1 | MTR_4g017610 | 33.745 | 486 | 248 | 17 | 15 | 451 | 16 | 476 | 7.44e-64 | 217 |
MS.gene84589.t1 | MTR_4g017610 | 26.891 | 238 | 132 | 7 | 257 | 452 | 6 | 243 | 1.08e-11 | 67.8 |
MS.gene84589.t1 | MTR_1g014060 | 53.917 | 217 | 92 | 5 | 21 | 235 | 9 | 219 | 1.81e-63 | 213 |
MS.gene84589.t1 | MTR_1g014060 | 45.304 | 181 | 85 | 3 | 294 | 460 | 210 | 390 | 1.60e-36 | 140 |
MS.gene84589.t1 | MTR_4g017410 | 32.665 | 499 | 269 | 20 | 6 | 454 | 3 | 484 | 1.20e-62 | 214 |
MS.gene84589.t1 | MTR_4g017470 | 29.264 | 516 | 257 | 12 | 1 | 454 | 1 | 470 | 1.38e-52 | 187 |
MS.gene84589.t1 | MTR_4g017470 | 26.939 | 245 | 140 | 8 | 257 | 479 | 5 | 232 | 6.71e-14 | 74.7 |
MS.gene84589.t1 | MTR_7g066390 | 56.329 | 158 | 41 | 1 | 305 | 462 | 1 | 130 | 6.63e-49 | 167 |
MS.gene84589.t1 | MTR_4g017550 | 30.042 | 476 | 245 | 19 | 41 | 452 | 20 | 471 | 6.19e-44 | 163 |
MS.gene84589.t1 | MTR_7g063720 | 37.264 | 212 | 116 | 2 | 258 | 454 | 17 | 226 | 6.63e-35 | 132 |
MS.gene84589.t1 | MTR_7g063720 | 29.289 | 239 | 128 | 11 | 2 | 233 | 16 | 220 | 2.90e-16 | 79.0 |
MS.gene84589.t1 | MTR_7g062270 | 38.506 | 174 | 102 | 4 | 13 | 185 | 11 | 180 | 1.60e-30 | 123 |
MS.gene84589.t1 | MTR_1g115440 | 34.538 | 249 | 141 | 7 | 1 | 238 | 1 | 238 | 4.26e-30 | 118 |
MS.gene84589.t1 | MTR_7g100420 | 34.056 | 323 | 160 | 11 | 166 | 454 | 94 | 397 | 6.58e-29 | 119 |
MS.gene84589.t1 | MTR_2g067310 | 43.931 | 173 | 51 | 5 | 23 | 193 | 58 | 186 | 7.75e-28 | 112 |
MS.gene84589.t1 | MTR_8g445860 | 30.328 | 244 | 152 | 5 | 4 | 239 | 5 | 238 | 1.73e-27 | 111 |
MS.gene84589.t1 | MTR_8g445860 | 28.378 | 222 | 122 | 6 | 262 | 447 | 11 | 231 | 2.53e-19 | 87.8 |
MS.gene84589.t1 | MTR_8g023240 | 22.776 | 562 | 342 | 17 | 13 | 530 | 38 | 551 | 5.89e-25 | 109 |
MS.gene84589.t1 | MTR_7g063850 | 32.877 | 219 | 111 | 5 | 267 | 454 | 69 | 282 | 5.05e-24 | 102 |
MS.gene84589.t1 | MTR_7g063690 | 29.643 | 280 | 126 | 7 | 13 | 291 | 13 | 222 | 6.04e-24 | 101 |
MS.gene84589.t1 | MTR_0150s0010 | 30.924 | 249 | 149 | 6 | 1 | 238 | 1 | 237 | 2.91e-22 | 96.3 |
MS.gene84589.t1 | MTR_4g019330 | 32.597 | 181 | 88 | 4 | 278 | 454 | 32 | 182 | 2.52e-18 | 83.6 |
MS.gene84589.t1 | MTR_1g115455 | 27.490 | 251 | 145 | 9 | 6 | 239 | 3 | 233 | 2.09e-16 | 79.3 |
MS.gene84589.t1 | MTR_1g115450 | 34.483 | 116 | 69 | 2 | 12 | 125 | 7 | 117 | 4.31e-14 | 70.1 |
MS.gene84589.t1 | MTR_1g115470 | 40.206 | 97 | 53 | 1 | 12 | 108 | 6 | 97 | 9.61e-14 | 73.9 |
MS.gene84589.t1 | MTR_4g019240 | 33.871 | 124 | 66 | 5 | 3 | 116 | 4 | 121 | 1.47e-13 | 69.7 |
MS.gene84589.t1 | MTR_1g115435 | 26.122 | 245 | 138 | 8 | 12 | 247 | 7 | 217 | 6.05e-13 | 68.9 |
MS.gene84589.t1 | MTR_7g063510 | 41.573 | 89 | 48 | 1 | 484 | 568 | 13 | 101 | 3.13e-12 | 63.5 |
MS.gene84589.t1 | MTR_0150s0030 | 36.264 | 91 | 52 | 2 | 6 | 95 | 2 | 87 | 8.89e-11 | 62.0 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene84589.t1 | AT3G09140 | 31.579 | 513 | 280 | 19 | 1 | 458 | 1 | 497 | 2.35e-55 | 195 |
MS.gene84589.t1 | AT5G01120 | 29.545 | 484 | 287 | 13 | 13 | 450 | 10 | 485 | 8.77e-52 | 185 |
MS.gene84589.t1 | AT3G09140 | 29.870 | 539 | 283 | 19 | 1 | 458 | 1 | 525 | 1.97e-51 | 185 |
MS.gene84589.t1 | AT5G01140 | 27.668 | 506 | 287 | 15 | 12 | 479 | 9 | 473 | 1.66e-48 | 176 |
MS.gene84589.t1 | AT5G01150 | 28.074 | 488 | 295 | 13 | 12 | 457 | 9 | 482 | 3.06e-48 | 175 |
MS.gene84589.t1 | AT3G09110 | 34.154 | 325 | 196 | 8 | 12 | 329 | 9 | 322 | 1.50e-47 | 169 |
MS.gene84589.t1 | AT5G43240 | 29.651 | 516 | 293 | 19 | 13 | 474 | 10 | 509 | 2.48e-47 | 173 |
MS.gene84589.t1 | AT5G43240 | 29.651 | 516 | 293 | 19 | 13 | 474 | 10 | 509 | 2.48e-47 | 173 |
MS.gene84589.t1 | AT5G43240 | 29.651 | 516 | 293 | 19 | 13 | 474 | 10 | 509 | 2.48e-47 | 173 |
MS.gene84589.t1 | AT5G01130 | 29.792 | 480 | 275 | 16 | 1 | 454 | 1 | 444 | 5.93e-44 | 162 |
MS.gene84589.t1 | AT5G37320 | 28.231 | 503 | 291 | 23 | 3 | 457 | 2 | 482 | 2.02e-38 | 148 |
MS.gene84589.t1 | AT3G09120 | 30.818 | 318 | 201 | 9 | 11 | 318 | 5 | 313 | 2.49e-35 | 135 |
MS.gene84589.t1 | AT3G09120 | 25.095 | 263 | 151 | 8 | 261 | 482 | 3 | 260 | 6.26e-11 | 64.3 |
MS.gene84589.t1 | AT5G43240 | 29.513 | 349 | 199 | 12 | 165 | 474 | 25 | 365 | 4.80e-23 | 101 |
Find 91 sgRNAs with CRISPR-Local
Find 170 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TAGAGCACCATTAACGTTTA+TGG | 0.174129 | 7.3:+39411193 | MS.gene84589:CDS |
GATCCTAAATCCCCTATTTC+TGG | 0.194829 | 7.3:+39411161 | MS.gene84589:CDS |
CAAAGTTACCATTGGAGTTT+TGG | 0.220351 | 7.3:+39409975 | MS.gene84589:CDS |
CTAGCATATCCTCCAGAAAT+AGG | 0.222209 | 7.3:-39411173 | None:intergenic |
TGGAATTTGAGTAAAGAAAT+TGG | 0.245259 | 7.3:+39410411 | MS.gene84589:CDS |
CCTCCAGAAATAGGGGATTT+AGG | 0.261981 | 7.3:-39411164 | None:intergenic |
AAGAAAAGATACCTCTTTCT+TGG | 0.262602 | 7.3:-39410580 | None:intergenic |
TGATCTTCTCAAATTGTCTT+TGG | 0.284928 | 7.3:+39410695 | MS.gene84589:CDS |
CCCGCTGAGACTGAGTTTCT+TGG | 0.286373 | 7.3:-39410225 | None:intergenic |
CAATGTTCAGTTTCATATAC+TGG | 0.302296 | 7.3:-39410257 | None:intergenic |
GATACCTTGTAACAATTATA+AGG | 0.309742 | 7.3:+39411112 | MS.gene84589:CDS |
AAACTTGTCGTAACAACATT+TGG | 0.329105 | 7.3:-39410486 | None:intergenic |
CTGGATGTGGCTTCTTTAGT+TGG | 0.329390 | 7.3:+39412475 | MS.gene84589:CDS |
CTTGGTGATGTTGATATTAA+CGG | 0.332558 | 7.3:-39410562 | None:intergenic |
AGACTTGCAGAATTGAAAAT+AGG | 0.343871 | 7.3:+39410322 | MS.gene84589:CDS |
ATATCATCACTTTAAATTGT+TGG | 0.353901 | 7.3:-39412727 | None:intergenic |
ACTTAATGATGTGGAGGAAA+TGG | 0.361252 | 7.3:+39411289 | MS.gene84589:CDS |
TCAAAATTTGCTTTGACAAA+CGG | 0.362323 | 7.3:+39411453 | MS.gene84589:CDS |
TAGCATATCCTCCAGAAATA+GGG | 0.363628 | 7.3:-39411172 | None:intergenic |
TCTGTCACCATAAACGTTAA+TGG | 0.367077 | 7.3:-39411200 | None:intergenic |
TTAACCTCCATTCGGTTACT+TGG | 0.371862 | 7.3:-39410780 | None:intergenic |
GAGGAAATGGGCGTTAATAT+TGG | 0.374409 | 7.3:+39411302 | MS.gene84589:CDS |
TACAAGGTATCGGTAATATC+TGG | 0.378376 | 7.3:-39411100 | None:intergenic |
AAATGCTTGGATTAGTTAGT+AGG | 0.380859 | 7.3:-39411055 | None:intergenic |
AACCACCATCAACATAGATT+TGG | 0.380923 | 7.3:-39412646 | None:intergenic |
AACGGCCTCAACCAGTTCAT+TGG | 0.391379 | 7.3:+39411471 | MS.gene84589:CDS |
AAAGGAAGAATCTGATGAAA+TGG | 0.399313 | 7.3:+39410815 | MS.gene84589:CDS |
AACCGAATGGAGGTTAATAT+TGG | 0.408331 | 7.3:+39410786 | MS.gene84589:CDS |
GGCAGGAAGTAGATCTGTTC+AGG | 0.408889 | 7.3:+39411926 | MS.gene84589:intron |
AGCTTCTTAACATTTCGCTT+AGG | 0.418229 | 7.3:+39410063 | MS.gene84589:CDS |
AATATTGAAGCAATGAGCTT+TGG | 0.421569 | 7.3:+39410117 | MS.gene84589:CDS |
ATCAACCAAATCTATGTTGA+TGG | 0.421611 | 7.3:+39412641 | MS.gene84589:CDS |
GCTTCTTAACATTTCGCTTA+GGG | 0.423741 | 7.3:+39410064 | MS.gene84589:CDS |
AAGATATGAAATACCATCAA+TGG | 0.434003 | 7.3:-39411249 | None:intergenic |
TACTATACTAACCAATGAAC+TGG | 0.434085 | 7.3:-39411482 | None:intergenic |
CGGAAATAACGTCACTTACA+AGG | 0.441619 | 7.3:+39412589 | MS.gene84589:CDS |
CTTAATGATGTGGAGGAAAT+GGG | 0.443722 | 7.3:+39411290 | MS.gene84589:CDS |
TCTATTTGCTGAGGCAGATA+AGG | 0.457603 | 7.3:+39410020 | MS.gene84589:CDS |
TACCAATATTAACCTCCATT+CGG | 0.462117 | 7.3:-39410788 | None:intergenic |
CACATTGTGTACCAACAATC+TGG | 0.462685 | 7.3:-39412545 | None:intergenic |
GGTACTGTTCAAGTTTCGTC+AGG | 0.472226 | 7.3:+39410343 | MS.gene84589:CDS |
TTATAATTGTTACAAGGTAT+CGG | 0.485993 | 7.3:-39411110 | None:intergenic |
GGTTAATATTGGTAAAGAAA+AGG | 0.492157 | 7.3:+39410797 | MS.gene84589:CDS |
TCAGACTGCATGGAAATGCT+TGG | 0.498154 | 7.3:-39411068 | None:intergenic |
TTAAATATAAAGTCGGACAT+AGG | 0.501749 | 7.3:-39410729 | None:intergenic |
ACTCCAATGGCATCCATTGA+TGG | 0.503942 | 7.3:+39411236 | MS.gene84589:CDS |
ATTTCCTCCACATCATTAAG+TGG | 0.506600 | 7.3:-39411287 | None:intergenic |
CAAGACCAAGGCCAGATTGT+TGG | 0.515955 | 7.3:+39412534 | MS.gene84589:CDS |
CATCCAGCAGTATCATCATT+AGG | 0.516253 | 7.3:-39412459 | None:intergenic |
GATCTTGTTTATTGAAGCAG+AGG | 0.517035 | 7.3:+39410872 | MS.gene84589:CDS |
CAGCCTAATGATGATACTGC+TGG | 0.517497 | 7.3:+39412456 | MS.gene84589:intron |
TTTCTCACCTTTCCCTTGGG+AGG | 0.518315 | 7.3:+39410921 | MS.gene84589:CDS |
CATTGACTTCAAGCTTCTGA+AGG | 0.521092 | 7.3:-39410515 | None:intergenic |
TAACCTCCATTCGGTTACTT+GGG | 0.521189 | 7.3:-39410779 | None:intergenic |
GTGTACCAACAATCTGGCCT+TGG | 0.521461 | 7.3:-39412539 | None:intergenic |
TCTCACAGAGGTAGTAAGAC+TGG | 0.530718 | 7.3:-39410296 | None:intergenic |
CAACTAGACAAAGTTACCAT+TGG | 0.532393 | 7.3:+39409967 | MS.gene84589:CDS |
TATCAACATCACCAAGAAAG+AGG | 0.532453 | 7.3:+39410569 | MS.gene84589:CDS |
ATACCATCAATGGATGCCAT+TGG | 0.558283 | 7.3:-39411239 | None:intergenic |
CCAAGAAACTCAGTCTCAGC+GGG | 0.559538 | 7.3:+39410225 | MS.gene84589:CDS |
AATGATGATACTGCTGGATG+TGG | 0.562722 | 7.3:+39412462 | MS.gene84589:CDS |
ACTAACCAATGAACTGGTTG+AGG | 0.567961 | 7.3:-39411476 | None:intergenic |
GTTTATGGTGACAGACGAGT+TGG | 0.571870 | 7.3:+39411208 | MS.gene84589:CDS |
TAACACTCCTCCCAAGGGAA+AGG | 0.572666 | 7.3:-39410928 | None:intergenic |
AGCATATCCTCCAGAAATAG+GGG | 0.573043 | 7.3:-39411171 | None:intergenic |
GCCAAGAAACTCAGTCTCAG+CGG | 0.575872 | 7.3:+39410224 | MS.gene84589:CDS |
CTTGTCCACCAAAACTCCAA+TGG | 0.582683 | 7.3:-39409983 | None:intergenic |
CATATGTAACACTCCTCCCA+AGG | 0.585037 | 7.3:-39410934 | None:intergenic |
TTTAGTCCCAAGTAACCGAA+TGG | 0.590843 | 7.3:+39410773 | MS.gene84589:CDS |
GGGCGTTAATATTGGCCAGA+AGG | 0.601635 | 7.3:+39411310 | MS.gene84589:CDS |
GTTCGTGAGTTCAGACTGCA+TGG | 0.601730 | 7.3:-39411078 | None:intergenic |
AAATAAAGTTCTATTTGCTG+AGG | 0.602370 | 7.3:+39410011 | MS.gene84589:CDS |
AGGGACCATTGCAAAACTTG+TGG | 0.604088 | 7.3:+39410083 | MS.gene84589:CDS |
CGTTAATATTGGCCAGAAGG+AGG | 0.604404 | 7.3:+39411313 | MS.gene84589:CDS |
TGAATGTTGCAAGAAGGATA+CGG | 0.605092 | 7.3:+39412569 | MS.gene84589:CDS |
GAACGTCCCACTTAATGATG+TGG | 0.609331 | 7.3:+39411280 | MS.gene84589:CDS |
CGAGTTGGTTGTGACTCCAA+TGG | 0.611456 | 7.3:+39411223 | MS.gene84589:CDS |
TTTCCTCCACATCATTAAGT+GGG | 0.612058 | 7.3:-39411286 | None:intergenic |
AAGCTTGAAGTCAATGACAT+TGG | 0.612687 | 7.3:+39410522 | MS.gene84589:CDS |
CGTCCCACTTAATGATGTGG+AGG | 0.619494 | 7.3:+39411283 | MS.gene84589:CDS |
AACCAAATCTATGTTGATGG+TGG | 0.623412 | 7.3:+39412644 | MS.gene84589:CDS |
CCTAAATCCCCTATTTCTGG+AGG | 0.628731 | 7.3:+39411164 | MS.gene84589:CDS |
ACAGAGGTAGTAAGACTGGA+AGG | 0.629969 | 7.3:-39410292 | None:intergenic |
GTTGGCAATCAAGCATATTG+TGG | 0.641007 | 7.3:-39412709 | None:intergenic |
AGTCCCAAGTAACCGAATGG+AGG | 0.644205 | 7.3:+39410776 | MS.gene84589:CDS |
ATATGTAACACTCCTCCCAA+GGG | 0.664294 | 7.3:-39410933 | None:intergenic |
ATGTGTTGAATGTTGCAAGA+AGG | 0.665559 | 7.3:+39412563 | MS.gene84589:CDS |
AAAGTTGAAGGTCAAGACCA+AGG | 0.676584 | 7.3:+39412522 | MS.gene84589:CDS |
GGAGTGTTACATATGCTCGA+AGG | 0.683354 | 7.3:+39410942 | MS.gene84589:CDS |
TGCAAGTCTCGTTCTCACAG+AGG | 0.684241 | 7.3:-39410308 | None:intergenic |
TCTATGGTCACAGACATGCA+AGG | 0.703516 | 7.3:+39410188 | MS.gene84589:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | TTTTGTTATAATTATTATGT+AGG | - | chr7.3:39411529-39411548 | None:intergenic | 10.0% |
!! | AAAAAATCAACAAAAGTTGA+AGG | + | chr7.3:39412510-39412529 | MS.gene84589:CDS | 20.0% |
!! | AAACAAGTTATTAGTTAGAA+TGG | - | chr7.3:39412422-39412441 | None:intergenic | 20.0% |
!! | AACAAGTTATTAGTTAGAAT+GGG | - | chr7.3:39412421-39412440 | None:intergenic | 20.0% |
!! | AATACATGAATTTGGTAAAA+AGG | - | chr7.3:39412174-39412193 | None:intergenic | 20.0% |
!! | ATCTTGATGAAAAATATCTA+TGG | + | chr7.3:39410172-39410191 | MS.gene84589:CDS | 20.0% |
!! | TAACGATAATTATATAACTG+AGG | - | chr7.3:39412218-39412237 | None:intergenic | 20.0% |
!! | TATAATTATTATGTAGGATG+AGG | - | chr7.3:39411523-39411542 | None:intergenic | 20.0% |
!! | TTATAATTGTTACAAGGTAT+CGG | - | chr7.3:39411113-39411132 | None:intergenic | 20.0% |
!!! | ATTTTTGTGTTTGAAATATG+TGG | + | chr7.3:39412024-39412043 | MS.gene84589:intron | 20.0% |
!!! | GTGCTTTTTAAATATAAAGT+CGG | - | chr7.3:39410739-39410758 | None:intergenic | 20.0% |
!!! | TAAAGAAATTGGTTTTGTTA+AGG | + | chr7.3:39410422-39410441 | MS.gene84589:CDS | 20.0% |
!!! | TTTTCCTTATAATTGTTACA+AGG | - | chr7.3:39411119-39411138 | None:intergenic | 20.0% |
! | AAGATATGAAATACCATCAA+TGG | - | chr7.3:39411252-39411271 | None:intergenic | 25.0% |
! | AGGAATCAAAAATGTATTTG+TGG | + | chr7.3:39410363-39410382 | MS.gene84589:CDS | 25.0% |
! | GATACCTTGTAACAATTATA+AGG | + | chr7.3:39411112-39411131 | MS.gene84589:CDS | 25.0% |
! | GGTTAATATTGGTAAAGAAA+AGG | + | chr7.3:39410797-39410816 | MS.gene84589:CDS | 25.0% |
! | GTGAGAAAAATACATGAATT+TGG | - | chr7.3:39412182-39412201 | None:intergenic | 25.0% |
! | TAGAAAAAGAAGAGAAGTAA+AGG | + | chr7.3:39411805-39411824 | MS.gene84589:intron | 25.0% |
! | TGAACATGCACATATAATAA+AGG | - | chr7.3:39411905-39411924 | None:intergenic | 25.0% |
! | TGGAATTTGAGTAAAGAAAT+TGG | + | chr7.3:39410411-39410430 | MS.gene84589:CDS | 25.0% |
! | TTAAATATAAAGTCGGACAT+AGG | - | chr7.3:39410732-39410751 | None:intergenic | 25.0% |
! | TTATTATATGTGCATGTTCA+TGG | + | chr7.3:39411905-39411924 | MS.gene84589:intron | 25.0% |
!! | AAATAAAGTTCTATTTGCTG+AGG | + | chr7.3:39410011-39410030 | MS.gene84589:CDS | 25.0% |
!! | TCAAAATTTGCTTTGACAAA+CGG | + | chr7.3:39411453-39411472 | MS.gene84589:CDS | 25.0% |
!! | TTTTTCATTGCTCTTAATCT+TGG | - | chr7.3:39412622-39412641 | None:intergenic | 25.0% |
AAACTTGTCGTAACAACATT+TGG | - | chr7.3:39410489-39410508 | None:intergenic | 30.0% | |
AAAGGAAGAATCTGATGAAA+TGG | + | chr7.3:39410815-39410834 | MS.gene84589:CDS | 30.0% | |
AAGAAAAGATACCTCTTTCT+TGG | - | chr7.3:39410583-39410602 | None:intergenic | 30.0% | |
AATATTGAAGCAATGAGCTT+TGG | + | chr7.3:39410117-39410136 | MS.gene84589:CDS | 30.0% | |
AATGAATGGTACCCATATAT+GGG | + | chr7.3:39411706-39411725 | MS.gene84589:intron | 30.0% | |
AGACTTGCAGAATTGAAAAT+AGG | + | chr7.3:39410322-39410341 | MS.gene84589:CDS | 30.0% | |
ATATGAACATCCCCATATAT+GGG | - | chr7.3:39411720-39411739 | None:intergenic | 30.0% | |
ATCAACCAAATCTATGTTGA+TGG | + | chr7.3:39412641-39412660 | MS.gene84589:CDS | 30.0% | |
ATGGAAGTTTAATAGAACCA+TGG | - | chr7.3:39412388-39412407 | None:intergenic | 30.0% | |
CAAACACAAAAATAGAAGCA+TGG | - | chr7.3:39412017-39412036 | None:intergenic | 30.0% | |
CAACCACAAGAAATCAAATA+TGG | - | chr7.3:39411400-39411419 | None:intergenic | 30.0% | |
CAATGTTCAGTTTCATATAC+TGG | - | chr7.3:39410260-39410279 | None:intergenic | 30.0% | |
CGATAATTATATAACTGAGG+TGG | - | chr7.3:39412215-39412234 | None:intergenic | 30.0% | |
CTCACTAATTCTTCAATATG+TGG | + | chr7.3:39410658-39410677 | MS.gene84589:intron | 30.0% | |
CTTCAATATGTGGTTTGAAT+AGG | + | chr7.3:39410668-39410687 | MS.gene84589:intron | 30.0% | |
TACCAATATTAACCTCCATT+CGG | - | chr7.3:39410791-39410810 | None:intergenic | 30.0% | |
TACTATACTAACCAATGAAC+TGG | - | chr7.3:39411485-39411504 | None:intergenic | 30.0% | |
TACTTCTTGAGAAAGACTAA+GGG | + | chr7.3:39412100-39412119 | MS.gene84589:intron | 30.0% | |
TAGTACTACACATAACAAGT+CGG | - | chr7.3:39411669-39411688 | None:intergenic | 30.0% | |
TGATCTTCTCAAATTGTCTT+TGG | + | chr7.3:39410695-39410714 | MS.gene84589:CDS | 30.0% | |
TGTTGAACAGAGAAAAATTC+TGG | + | chr7.3:39410391-39410410 | MS.gene84589:CDS | 30.0% | |
TTACTTCTTGAGAAAGACTA+AGG | + | chr7.3:39412099-39412118 | MS.gene84589:intron | 30.0% | |
TTAGTAAGACATGACAATAG+AGG | - | chr7.3:39412135-39412154 | None:intergenic | 30.0% | |
! | GGACTAAATTTTCAACAGAT+TGG | - | chr7.3:39410761-39410780 | None:intergenic | 30.0% |
! | GTTTGTCAAAGCAAATTTTG+AGG | - | chr7.3:39411454-39411473 | None:intergenic | 30.0% |
! | TCACCATATTTGATTTCTTG+TGG | + | chr7.3:39411394-39411413 | MS.gene84589:intron | 30.0% |
! | TGTGTAGTACTAATTTTCCA+TGG | + | chr7.3:39411677-39411696 | MS.gene84589:intron | 30.0% |
! | TTCTACCTTTTGCTTCTTTA+GGG | - | chr7.3:39411976-39411995 | None:intergenic | 30.0% |
! | TTTCTACCTTTTGCTTCTTT+AGG | - | chr7.3:39411977-39411996 | None:intergenic | 30.0% |
! | TTTTGTCAAGTGCTTTTCTA+TGG | - | chr7.3:39412272-39412291 | None:intergenic | 30.0% |
!! | AAATGCTTGGATTAGTTAGT+AGG | - | chr7.3:39411058-39411077 | None:intergenic | 30.0% |
!! | CTTGGTGATGTTGATATTAA+CGG | - | chr7.3:39410565-39410584 | None:intergenic | 30.0% |
!!! | GTTGATTTTTTGTTGTCTGA+AGG | - | chr7.3:39412501-39412520 | None:intergenic | 30.0% |
AACCACCATCAACATAGATT+TGG | - | chr7.3:39412649-39412668 | None:intergenic | 35.0% | |
AACCGAATGGAGGTTAATAT+TGG | + | chr7.3:39410786-39410805 | MS.gene84589:CDS | 35.0% | |
AAGCTTGAAGTCAATGACAT+TGG | + | chr7.3:39410522-39410541 | MS.gene84589:CDS | 35.0% | |
ACTTAATGATGTGGAGGAAA+TGG | + | chr7.3:39411289-39411308 | MS.gene84589:CDS | 35.0% | |
ACTTCTTGAGAAAGACTAAG+GGG | + | chr7.3:39412101-39412120 | MS.gene84589:intron | 35.0% | |
AGCTTCTTAACATTTCGCTT+AGG | + | chr7.3:39410063-39410082 | MS.gene84589:CDS | 35.0% | |
AGGAAGAAAGATTGAACGAA+AGG | + | chr7.3:39411825-39411844 | MS.gene84589:intron | 35.0% | |
ATGAATGGTACCCATATATG+GGG | + | chr7.3:39411707-39411726 | MS.gene84589:intron | 35.0% | |
ATGTGTTGAATGTTGCAAGA+AGG | + | chr7.3:39412563-39412582 | MS.gene84589:CDS | 35.0% | |
ATTTCCTCCACATCATTAAG+TGG | - | chr7.3:39411290-39411309 | None:intergenic | 35.0% | |
CAACTAGACAAAGTTACCAT+TGG | + | chr7.3:39409967-39409986 | MS.gene84589:CDS | 35.0% | |
CAATGAATGGTACCCATATA+TGG | + | chr7.3:39411705-39411724 | MS.gene84589:intron | 35.0% | |
CATATGAACATCCCCATATA+TGG | - | chr7.3:39411721-39411740 | None:intergenic | 35.0% | |
CATATGATCTTAGGGTAATG+AGG | + | chr7.3:39411735-39411754 | MS.gene84589:intron | 35.0% | |
CTTAATGATGTGGAGGAAAT+GGG | + | chr7.3:39411290-39411309 | MS.gene84589:CDS | 35.0% | |
GCTTCTTAACATTTCGCTTA+GGG | + | chr7.3:39410064-39410083 | MS.gene84589:CDS | 35.0% | |
GGGATGTTCATATGATCTTA+GGG | + | chr7.3:39411727-39411746 | MS.gene84589:intron | 35.0% | |
GTAACAAGTGATTCAACATC+TGG | - | chr7.3:39412340-39412359 | None:intergenic | 35.0% | |
TACCATTCATTGCATTTCCA+TGG | - | chr7.3:39411697-39411716 | None:intergenic | 35.0% | |
TAGCATATCCTCCAGAAATA+GGG | - | chr7.3:39411175-39411194 | None:intergenic | 35.0% | |
TAGTTAGAATGGGAGAATGA+GGG | - | chr7.3:39412411-39412430 | None:intergenic | 35.0% | |
TATCAACATCACCAAGAAAG+AGG | + | chr7.3:39410569-39410588 | MS.gene84589:CDS | 35.0% | |
TCTGTCACCATAAACGTTAA+TGG | - | chr7.3:39411203-39411222 | None:intergenic | 35.0% | |
TGAATGTTGCAAGAAGGATA+CGG | + | chr7.3:39412569-39412588 | MS.gene84589:CDS | 35.0% | |
TGAGCTCAGAAAAATGCTTA+AGG | + | chr7.3:39411015-39411034 | MS.gene84589:CDS | 35.0% | |
TGATTCAACATCTGGTAGAA+CGG | - | chr7.3:39412332-39412351 | None:intergenic | 35.0% | |
TTAGTTAGAATGGGAGAATG+AGG | - | chr7.3:39412412-39412431 | None:intergenic | 35.0% | |
TTCCATGGAAATGCAATGAA+TGG | + | chr7.3:39411692-39411711 | MS.gene84589:intron | 35.0% | |
TTTCCTCCACATCATTAAGT+GGG | - | chr7.3:39411289-39411308 | None:intergenic | 35.0% | |
! | AACCAAATCTATGTTGATGG+TGG | + | chr7.3:39412644-39412663 | MS.gene84589:CDS | 35.0% |
! | ATCACTTGTTACTGAATGAG+AGG | + | chr7.3:39412348-39412367 | MS.gene84589:intron | 35.0% |
! | ATTAGCCACAAGTTTTGCAA+TGG | - | chr7.3:39410091-39410110 | None:intergenic | 35.0% |
! | ATTTGATTTCTTGTGGTTGC+AGG | + | chr7.3:39411401-39411420 | MS.gene84589:intron | 35.0% |
! | CAAAGTTACCATTGGAGTTT+TGG | + | chr7.3:39409975-39409994 | MS.gene84589:CDS | 35.0% |
! | GATCTTGTTTATTGAAGCAG+AGG | + | chr7.3:39410872-39410891 | MS.gene84589:CDS | 35.0% |
! | TAGAGCACCATTAACGTTTA+TGG | + | chr7.3:39411193-39411212 | MS.gene84589:CDS | 35.0% |
! | TCACTTGTTACTGAATGAGA+GGG | + | chr7.3:39412349-39412368 | MS.gene84589:intron | 35.0% |
! | TCTACCTTTTGCTTCTTTAG+GGG | - | chr7.3:39411975-39411994 | None:intergenic | 35.0% |
! | TTTGATTTCTTGTGGTTGCA+GGG | + | chr7.3:39411402-39411421 | MS.gene84589:intron | 35.0% |
!! | TACAAGGTATCGGTAATATC+TGG | - | chr7.3:39411103-39411122 | None:intergenic | 35.0% |
!! | TTTGTCTAGTTGTTTTGCTG+AGG | - | chr7.3:39409959-39409978 | None:intergenic | 35.0% |
!!! | ATGTAGGATGAGGTTTTGTT+TGG | - | chr7.3:39411513-39411532 | None:intergenic | 35.0% |
AAAGTTGAAGGTCAAGACCA+AGG | + | chr7.3:39412522-39412541 | MS.gene84589:CDS | 40.0% | |
AATGATGATACTGCTGGATG+TGG | + | chr7.3:39412462-39412481 | MS.gene84589:CDS | 40.0% | |
ACTAACCAATGAACTGGTTG+AGG | - | chr7.3:39411479-39411498 | None:intergenic | 40.0% | |
AGCATATCCTCCAGAAATAG+GGG | - | chr7.3:39411174-39411193 | None:intergenic | 40.0% | |
ATACCATCAATGGATGCCAT+TGG | - | chr7.3:39411242-39411261 | None:intergenic | 40.0% | |
ATATGTAACACTCCTCCCAA+GGG | - | chr7.3:39410936-39410955 | None:intergenic | 40.0% | |
ATCATCATTAGGCTGAACAC+AGG | - | chr7.3:39412451-39412470 | None:intergenic | 40.0% | |
CACATTGTGTACCAACAATC+TGG | - | chr7.3:39412548-39412567 | None:intergenic | 40.0% | |
CATCCAGCAGTATCATCATT+AGG | - | chr7.3:39412462-39412481 | None:intergenic | 40.0% | |
CGGAAATAACGTCACTTACA+AGG | + | chr7.3:39412589-39412608 | MS.gene84589:CDS | 40.0% | |
CTAGCATATCCTCCAGAAAT+AGG | - | chr7.3:39411176-39411195 | None:intergenic | 40.0% | |
GAGGAAATGGGCGTTAATAT+TGG | + | chr7.3:39411302-39411321 | MS.gene84589:CDS | 40.0% | |
GATCCTAAATCCCCTATTTC+TGG | + | chr7.3:39411161-39411180 | MS.gene84589:CDS | 40.0% | |
GGGGATGTTCATATGATCTT+AGG | + | chr7.3:39411726-39411745 | MS.gene84589:intron | 40.0% | |
GTAACCACCTCTTATGTGTT+CGG | + | chr7.3:39411637-39411656 | MS.gene84589:intron | 40.0% | |
GTTACTACCGAACACATAAG+AGG | - | chr7.3:39411647-39411666 | None:intergenic | 40.0% | |
GTTGGCAATCAAGCATATTG+TGG | - | chr7.3:39412712-39412731 | None:intergenic | 40.0% | |
TAACCTCCATTCGGTTACTT+GGG | - | chr7.3:39410782-39410801 | None:intergenic | 40.0% | |
TATATGTGCATGTTCATGGC+AGG | + | chr7.3:39411909-39411928 | MS.gene84589:intron | 40.0% | |
TTAACCTCCATTCGGTTACT+TGG | - | chr7.3:39410783-39410802 | None:intergenic | 40.0% | |
TTTAGTCCCAAGTAACCGAA+TGG | + | chr7.3:39410773-39410792 | MS.gene84589:CDS | 40.0% | |
! | AGTTTTCTCACCTTTCCCTT+GGG | + | chr7.3:39410918-39410937 | MS.gene84589:CDS | 40.0% |
! | CTACCTTTTGCTTCTTTAGG+GGG | - | chr7.3:39411974-39411993 | None:intergenic | 40.0% |
! | TAGTTTTCTCACCTTTCCCT+TGG | + | chr7.3:39410917-39410936 | MS.gene84589:CDS | 40.0% |
! | TCTATTTGCTGAGGCAGATA+AGG | + | chr7.3:39410020-39410039 | MS.gene84589:CDS | 40.0% |
!! | AGTTACCATTGGAGTTTTGG+TGG | + | chr7.3:39409978-39409997 | MS.gene84589:CDS | 40.0% |
!! | CATTGACTTCAAGCTTCTGA+AGG | - | chr7.3:39410518-39410537 | None:intergenic | 40.0% |
ACAGAGGTAGTAAGACTGGA+AGG | - | chr7.3:39410295-39410314 | None:intergenic | 45.0% | |
ACTACCGAACACATAAGAGG+TGG | - | chr7.3:39411644-39411663 | None:intergenic | 45.0% | |
ACTCCAATGGCATCCATTGA+TGG | + | chr7.3:39411236-39411255 | MS.gene84589:CDS | 45.0% | |
ACTGAATGAGAGGGAAGTCA+TGG | + | chr7.3:39412358-39412377 | MS.gene84589:intron | 45.0% | |
AGGGACCATTGCAAAACTTG+TGG | + | chr7.3:39410083-39410102 | MS.gene84589:CDS | 45.0% | |
ATTGGCCAGAAGGAGGTAAA+AGG | + | chr7.3:39411320-39411339 | MS.gene84589:intron | 45.0% | |
CAGCCTAATGATGATACTGC+TGG | + | chr7.3:39412456-39412475 | MS.gene84589:intron | 45.0% | |
CATATGTAACACTCCTCCCA+AGG | - | chr7.3:39410937-39410956 | None:intergenic | 45.0% | |
CCTCCAGAAATAGGGGATTT+AGG | - | chr7.3:39411167-39411186 | None:intergenic | 45.0% | |
CGTTAATATTGGCCAGAAGG+AGG | + | chr7.3:39411313-39411332 | MS.gene84589:CDS | 45.0% | |
CTGAATGAGAGGGAAGTCAT+GGG | + | chr7.3:39412359-39412378 | MS.gene84589:intron | 45.0% | |
CTGGATGTGGCTTCTTTAGT+TGG | + | chr7.3:39412475-39412494 | MS.gene84589:CDS | 45.0% | |
CTTGTCCACCAAAACTCCAA+TGG | - | chr7.3:39409986-39410005 | None:intergenic | 45.0% | |
GAACGTCCCACTTAATGATG+TGG | + | chr7.3:39411280-39411299 | MS.gene84589:CDS | 45.0% | |
GTTTATGGTGACAGACGAGT+TGG | + | chr7.3:39411208-39411227 | MS.gene84589:CDS | 45.0% | |
TAGAATGGGAGAATGAGGGA+TGG | - | chr7.3:39412407-39412426 | None:intergenic | 45.0% | |
TAGCCCCCTAAAGAAGCAAA+AGG | + | chr7.3:39411968-39411987 | MS.gene84589:CDS | 45.0% | |
TCAGACTGCATGGAAATGCT+TGG | - | chr7.3:39411071-39411090 | None:intergenic | 45.0% | |
TCTATGGTCACAGACATGCA+AGG | + | chr7.3:39410188-39410207 | MS.gene84589:CDS | 45.0% | |
TCTCACAGAGGTAGTAAGAC+TGG | - | chr7.3:39410299-39410318 | None:intergenic | 45.0% | |
TTGGCCAGAAGGAGGTAAAA+GGG | + | chr7.3:39411321-39411340 | MS.gene84589:intron | 45.0% | |
! | AGATTGAACGAAAGGTGCGA+AGG | + | chr7.3:39411833-39411852 | MS.gene84589:intron | 45.0% |
! | GGAGTGTTACATATGCTCGA+AGG | + | chr7.3:39410942-39410961 | MS.gene84589:CDS | 45.0% |
! | GGTACTGTTCAAGTTTCGTC+AGG | + | chr7.3:39410343-39410362 | MS.gene84589:CDS | 45.0% |
!! | CCTAAATCCCCTATTTCTGG+AGG | + | chr7.3:39411164-39411183 | MS.gene84589:CDS | 45.0% |
AACGGCCTCAACCAGTTCAT+TGG | + | chr7.3:39411471-39411490 | MS.gene84589:CDS | 50.0% | |
AGTCCCAAGTAACCGAATGG+AGG | + | chr7.3:39410776-39410795 | MS.gene84589:CDS | 50.0% | |
CAAGACCAAGGCCAGATTGT+TGG | + | chr7.3:39412534-39412553 | MS.gene84589:CDS | 50.0% | |
CCAAGAAACTCAGTCTCAGC+GGG | + | chr7.3:39410225-39410244 | MS.gene84589:CDS | 50.0% | |
CGTCCCACTTAATGATGTGG+AGG | + | chr7.3:39411283-39411302 | MS.gene84589:CDS | 50.0% | |
GCCAAGAAACTCAGTCTCAG+CGG | + | chr7.3:39410224-39410243 | MS.gene84589:CDS | 50.0% | |
GGCAGGAAGTAGATCTGTTC+AGG | + | chr7.3:39411926-39411945 | MS.gene84589:intron | 50.0% | |
GGGCGTTAATATTGGCCAGA+AGG | + | chr7.3:39411310-39411329 | MS.gene84589:CDS | 50.0% | |
GTGTACCAACAATCTGGCCT+TGG | - | chr7.3:39412542-39412561 | None:intergenic | 50.0% | |
GTTCGTGAGTTCAGACTGCA+TGG | - | chr7.3:39411081-39411100 | None:intergenic | 50.0% | |
TAACACTCCTCCCAAGGGAA+AGG | - | chr7.3:39410931-39410950 | None:intergenic | 50.0% | |
TGCAAGTCTCGTTCTCACAG+AGG | - | chr7.3:39410311-39410330 | None:intergenic | 50.0% | |
TTTCTCACCTTTCCCTTGGG+AGG | + | chr7.3:39410921-39410940 | MS.gene84589:CDS | 50.0% | |
! | CAGTCCCTTTTACCTCCTTC+TGG | - | chr7.3:39411328-39411347 | None:intergenic | 50.0% |
!! | CGAGTTGGTTGTGACTCCAA+TGG | + | chr7.3:39411223-39411242 | MS.gene84589:CDS | 50.0% |
AGGGAAGTCATGGGTGACCA+TGG | + | chr7.3:39412368-39412387 | MS.gene84589:intron | 55.0% | |
CCCGCTGAGACTGAGTTTCT+TGG | - | chr7.3:39410228-39410247 | None:intergenic | 55.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr7.3 | gene | 39409943 | 39412743 | 39409943 | ID=MS.gene84589 |
chr7.3 | mRNA | 39409943 | 39412743 | 39409943 | ID=MS.gene84589.t1;Parent=MS.gene84589 |
chr7.3 | exon | 39409943 | 39410590 | 39409943 | ID=MS.gene84589.t1.exon1;Parent=MS.gene84589.t1 |
chr7.3 | CDS | 39409943 | 39410590 | 39409943 | ID=cds.MS.gene84589.t1;Parent=MS.gene84589.t1 |
chr7.3 | exon | 39410690 | 39411334 | 39410690 | ID=MS.gene84589.t1.exon2;Parent=MS.gene84589.t1 |
chr7.3 | CDS | 39410690 | 39411334 | 39410690 | ID=cds.MS.gene84589.t1;Parent=MS.gene84589.t1 |
chr7.3 | exon | 39411423 | 39411492 | 39411423 | ID=MS.gene84589.t1.exon3;Parent=MS.gene84589.t1 |
chr7.3 | CDS | 39411423 | 39411492 | 39411423 | ID=cds.MS.gene84589.t1;Parent=MS.gene84589.t1 |
chr7.3 | exon | 39411931 | 39411989 | 39411931 | ID=MS.gene84589.t1.exon4;Parent=MS.gene84589.t1 |
chr7.3 | CDS | 39411931 | 39411989 | 39411931 | ID=cds.MS.gene84589.t1;Parent=MS.gene84589.t1 |
chr7.3 | exon | 39412459 | 39412743 | 39412459 | ID=MS.gene84589.t1.exon5;Parent=MS.gene84589.t1 |
chr7.3 | CDS | 39412459 | 39412743 | 39412459 | ID=cds.MS.gene84589.t1;Parent=MS.gene84589.t1 |
Gene Sequence |
Protein sequence |