Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene50810.t1 | AES86950.1 | 75.8 | 508 | 90 | 5 | 7 | 500 | 4 | 492 | 3.40E-202 | 714.5 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene50810.t1 | G7JQ74 | 75.8 | 508 | 90 | 5 | 7 | 500 | 4 | 492 | 2.5e-202 | 714.5 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene50810.t1 | MTR_4g017410 | 76.718 | 524 | 82 | 7 | 1 | 508 | 1 | 500 | 0.0 | 769 |
MS.gene50810.t1 | MTR_4g017440 | 67.515 | 511 | 150 | 6 | 1 | 498 | 1 | 508 | 0.0 | 664 |
MS.gene50810.t1 | MTR_4g017470 | 68.762 | 525 | 108 | 6 | 1 | 508 | 1 | 486 | 0.0 | 664 |
MS.gene50810.t1 | MTR_4g017830 | 66.016 | 512 | 157 | 5 | 1 | 499 | 1 | 508 | 0.0 | 657 |
MS.gene50810.t1 | MTR_4g017550 | 73.581 | 458 | 105 | 6 | 41 | 489 | 20 | 470 | 0.0 | 654 |
MS.gene50810.t1 | MTR_4g017550 | 27.600 | 250 | 134 | 8 | 9 | 238 | 244 | 466 | 2.76e-12 | 69.3 |
MS.gene50810.t1 | MTR_4g019340 | 63.911 | 496 | 128 | 8 | 10 | 482 | 36 | 503 | 0.0 | 594 |
MS.gene50810.t1 | MTR_4g017610 | 61.145 | 489 | 175 | 7 | 1 | 488 | 1 | 475 | 0.0 | 573 |
MS.gene50810.t1 | MTR_4g019310 | 40.848 | 519 | 268 | 15 | 1 | 500 | 1 | 499 | 1.63e-110 | 337 |
MS.gene50810.t1 | MTR_7g066570 | 35.728 | 529 | 282 | 18 | 1 | 506 | 1 | 494 | 1.19e-79 | 259 |
MS.gene50810.t1 | MTR_7g066410 | 35.048 | 525 | 275 | 17 | 13 | 493 | 11 | 513 | 1.71e-75 | 247 |
MS.gene50810.t1 | MTR_7g066410 | 29.614 | 233 | 153 | 6 | 10 | 239 | 282 | 506 | 2.86e-13 | 72.4 |
MS.gene50810.t1 | MTR_7g066340 | 34.592 | 503 | 262 | 18 | 2 | 492 | 6 | 453 | 2.06e-74 | 243 |
MS.gene50810.t1 | MTR_7g058710 | 33.015 | 524 | 284 | 16 | 1 | 498 | 1 | 483 | 1.13e-73 | 241 |
MS.gene50810.t1 | MTR_7g066430 | 34.517 | 507 | 283 | 15 | 13 | 494 | 5 | 487 | 8.72e-73 | 239 |
MS.gene50810.t1 | MTR_7g066350 | 35.108 | 507 | 245 | 16 | 3 | 488 | 2 | 445 | 4.71e-71 | 234 |
MS.gene50810.t1 | MTR_7g066260 | 34.337 | 498 | 252 | 15 | 13 | 489 | 16 | 459 | 2.75e-70 | 233 |
MS.gene50810.t1 | MTR_7g066260 | 30.085 | 236 | 128 | 9 | 271 | 485 | 15 | 234 | 1.36e-12 | 70.1 |
MS.gene50810.t1 | MTR_7g066260 | 27.350 | 234 | 126 | 9 | 8 | 239 | 265 | 456 | 6.73e-12 | 68.2 |
MS.gene50810.t1 | MTR_7g012680 | 33.466 | 502 | 263 | 16 | 7 | 498 | 11 | 451 | 3.10e-65 | 218 |
MS.gene50810.t1 | MTR_7g063660 | 33.858 | 508 | 284 | 18 | 8 | 498 | 5 | 477 | 1.28e-64 | 217 |
MS.gene50810.t1 | MTR_7g063660 | 29.101 | 189 | 105 | 6 | 266 | 441 | 4 | 176 | 3.67e-13 | 72.0 |
MS.gene50810.t1 | MTR_1g041315 | 33.925 | 507 | 238 | 20 | 5 | 476 | 7 | 451 | 1.77e-62 | 212 |
MS.gene50810.t1 | MTR_7g063900 | 33.140 | 516 | 273 | 18 | 10 | 493 | 8 | 483 | 1.40e-61 | 209 |
MS.gene50810.t1 | MTR_7g066360 | 34.959 | 492 | 245 | 17 | 13 | 489 | 15 | 446 | 3.42e-61 | 208 |
MS.gene50810.t1 | MTR_7g062280 | 33.205 | 518 | 277 | 16 | 13 | 498 | 11 | 491 | 4.16e-60 | 206 |
MS.gene50810.t1 | MTR_7g066400 | 33.399 | 509 | 242 | 20 | 1 | 488 | 1 | 433 | 1.34e-59 | 203 |
MS.gene50810.t1 | MTR_7g063880 | 32.359 | 513 | 277 | 20 | 1 | 493 | 1 | 463 | 3.14e-58 | 200 |
MS.gene50810.t1 | MTR_7g062300 | 31.977 | 516 | 282 | 17 | 1 | 491 | 1 | 472 | 4.14e-57 | 197 |
MS.gene50810.t1 | MTR_7g066580 | 30.140 | 501 | 264 | 14 | 18 | 492 | 1 | 441 | 1.55e-54 | 190 |
MS.gene50810.t1 | MTR_7g066580 | 28.340 | 247 | 136 | 8 | 11 | 238 | 214 | 438 | 2.20e-13 | 72.4 |
MS.gene50810.t1 | MTR_7g063840 | 31.774 | 513 | 285 | 18 | 7 | 498 | 5 | 473 | 1.79e-54 | 190 |
MS.gene50810.t1 | MTR_7g063890 | 31.456 | 515 | 288 | 16 | 13 | 499 | 28 | 505 | 3.36e-52 | 185 |
MS.gene50810.t1 | MTR_7g063830 | 31.076 | 502 | 252 | 15 | 13 | 493 | 11 | 439 | 3.01e-51 | 181 |
MS.gene50810.t1 | MTR_7g063830 | 26.275 | 255 | 152 | 9 | 266 | 502 | 5 | 241 | 1.28e-11 | 67.0 |
MS.gene50810.t1 | MTR_7g066480 | 32.317 | 492 | 236 | 14 | 13 | 493 | 17 | 422 | 1.98e-50 | 178 |
MS.gene50810.t1 | MTR_7g066310 | 30.297 | 505 | 200 | 14 | 7 | 488 | 4 | 379 | 3.50e-50 | 177 |
MS.gene50810.t1 | MTR_7g063820 | 32.567 | 522 | 290 | 20 | 1 | 498 | 1 | 484 | 3.92e-49 | 176 |
MS.gene50810.t1 | MTR_7g066290 | 36.340 | 377 | 199 | 14 | 1 | 356 | 5 | 361 | 1.44e-48 | 173 |
MS.gene50810.t1 | MTR_7g063920 | 29.412 | 510 | 274 | 14 | 1 | 498 | 1 | 436 | 1.18e-47 | 171 |
MS.gene50810.t1 | MTR_7g063670 | 31.068 | 515 | 277 | 17 | 1 | 498 | 4 | 457 | 2.75e-47 | 171 |
MS.gene50810.t1 | MTR_7g058700 | 28.571 | 525 | 233 | 16 | 10 | 498 | 509 | 927 | 7.70e-46 | 172 |
MS.gene50810.t1 | MTR_3g007740 | 30.080 | 502 | 283 | 15 | 1 | 493 | 1 | 443 | 5.32e-45 | 164 |
MS.gene50810.t1 | MTR_7g066490 | 30.309 | 485 | 241 | 13 | 13 | 493 | 17 | 408 | 6.79e-43 | 157 |
MS.gene50810.t1 | MTR_4g019240 | 62.205 | 127 | 38 | 4 | 1 | 123 | 1 | 121 | 6.76e-42 | 148 |
MS.gene50810.t1 | MTR_4g019240 | 68.627 | 51 | 16 | 0 | 451 | 501 | 113 | 163 | 3.22e-13 | 68.6 |
MS.gene50810.t1 | MTR_3g065200 | 29.854 | 479 | 264 | 18 | 13 | 486 | 4 | 415 | 3.06e-41 | 154 |
MS.gene50810.t1 | MTR_2g029400 | 28.542 | 480 | 240 | 13 | 13 | 480 | 15 | 403 | 6.75e-41 | 152 |
MS.gene50810.t1 | MTR_7g066280 | 29.371 | 429 | 220 | 17 | 100 | 488 | 1 | 386 | 3.08e-32 | 128 |
MS.gene50810.t1 | MTR_1g014060 | 35.814 | 215 | 114 | 9 | 21 | 228 | 9 | 206 | 2.69e-27 | 114 |
MS.gene50810.t1 | MTR_1g014060 | 32.171 | 258 | 128 | 10 | 253 | 498 | 168 | 390 | 4.21e-14 | 74.3 |
MS.gene50810.t1 | MTR_7g066680 | 32.830 | 265 | 150 | 9 | 222 | 472 | 37 | 287 | 1.02e-23 | 102 |
MS.gene50810.t1 | MTR_8g445860 | 28.992 | 238 | 145 | 8 | 13 | 242 | 14 | 235 | 2.62e-19 | 87.4 |
MS.gene50810.t1 | MTR_8g445860 | 28.696 | 230 | 148 | 5 | 267 | 486 | 9 | 232 | 3.77e-18 | 84.3 |
MS.gene50810.t1 | MTR_1g115440 | 28.631 | 241 | 145 | 9 | 13 | 242 | 12 | 236 | 6.43e-19 | 86.7 |
MS.gene50810.t1 | MTR_1g115440 | 27.572 | 243 | 147 | 6 | 262 | 486 | 2 | 233 | 1.49e-16 | 79.7 |
MS.gene50810.t1 | MTR_7g063850 | 25.392 | 319 | 191 | 10 | 194 | 498 | 3 | 288 | 9.20e-18 | 84.3 |
MS.gene50810.t1 | MTR_8g023240 | 24.056 | 503 | 286 | 19 | 12 | 480 | 37 | 477 | 1.27e-17 | 86.3 |
MS.gene50810.t1 | MTR_7g062270 | 33.000 | 200 | 103 | 10 | 1 | 191 | 1 | 178 | 2.17e-17 | 84.3 |
MS.gene50810.t1 | MTR_7g100420 | 28.144 | 334 | 183 | 10 | 176 | 488 | 96 | 393 | 6.66e-17 | 83.2 |
MS.gene50810.t1 | MTR_0150s0010 | 30.040 | 253 | 148 | 11 | 1 | 242 | 1 | 235 | 9.33e-16 | 77.4 |
MS.gene50810.t1 | MTR_0150s0010 | 27.426 | 237 | 147 | 5 | 266 | 486 | 5 | 232 | 1.32e-14 | 73.9 |
MS.gene50810.t1 | MTR_4g019330 | 30.093 | 216 | 90 | 5 | 285 | 498 | 32 | 188 | 5.28e-15 | 73.9 |
MS.gene50810.t1 | MTR_1g115435 | 27.083 | 240 | 133 | 8 | 13 | 247 | 8 | 210 | 6.76e-15 | 74.3 |
MS.gene50810.t1 | MTR_1g115455 | 26.316 | 247 | 139 | 7 | 13 | 242 | 10 | 230 | 1.30e-13 | 70.9 |
MS.gene50810.t1 | MTR_1g115455 | 27.530 | 247 | 136 | 9 | 263 | 486 | 1 | 227 | 3.44e-12 | 66.6 |
MS.gene50810.t1 | MTR_8g044880 | 24.911 | 281 | 146 | 9 | 13 | 242 | 9 | 275 | 2.96e-13 | 70.5 |
MS.gene50810.t1 | MTR_8g044880 | 43.478 | 69 | 39 | 0 | 266 | 334 | 3 | 71 | 7.04e-11 | 63.5 |
MS.gene50810.t1 | MTR_6g006800 | 70.213 | 47 | 13 | 1 | 1 | 47 | 1 | 46 | 1.08e-12 | 63.5 |
MS.gene50810.t1 | MTR_1g115450 | 41.333 | 75 | 44 | 0 | 266 | 340 | 2 | 76 | 2.37e-12 | 65.1 |
MS.gene50810.t1 | MTR_8g445920 | 41.791 | 67 | 39 | 0 | 266 | 332 | 5 | 71 | 3.32e-12 | 63.5 |
MS.gene50810.t1 | MTR_8g044890 | 41.791 | 67 | 39 | 0 | 266 | 332 | 5 | 71 | 3.32e-12 | 63.5 |
MS.gene50810.t1 | MTR_0150s0030 | 42.029 | 69 | 40 | 0 | 266 | 334 | 3 | 71 | 1.03e-11 | 64.7 |
MS.gene50810.t1 | MTR_8g445910 | 24.373 | 279 | 140 | 9 | 13 | 242 | 9 | 265 | 1.94e-11 | 65.1 |
MS.gene50810.t1 | MTR_8g445910 | 43.478 | 69 | 39 | 0 | 266 | 334 | 3 | 71 | 5.18e-11 | 63.9 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene50810.t1 | AT5G01120 | 32.500 | 520 | 305 | 16 | 13 | 508 | 10 | 507 | 4.89e-71 | 235 |
MS.gene50810.t1 | AT5G43240 | 33.898 | 531 | 287 | 20 | 13 | 508 | 10 | 511 | 2.86e-69 | 231 |
MS.gene50810.t1 | AT5G43240 | 33.898 | 531 | 287 | 20 | 13 | 508 | 10 | 511 | 2.86e-69 | 231 |
MS.gene50810.t1 | AT5G43240 | 33.898 | 531 | 287 | 20 | 13 | 508 | 10 | 511 | 2.86e-69 | 231 |
MS.gene50810.t1 | AT5G01130 | 32.041 | 490 | 268 | 15 | 13 | 492 | 10 | 444 | 2.46e-61 | 208 |
MS.gene50810.t1 | AT5G01140 | 32.114 | 492 | 279 | 16 | 15 | 498 | 12 | 456 | 1.91e-60 | 206 |
MS.gene50810.t1 | AT5G01150 | 30.938 | 501 | 306 | 12 | 15 | 500 | 12 | 487 | 4.27e-60 | 206 |
MS.gene50810.t1 | AT3G09140 | 30.604 | 513 | 300 | 16 | 11 | 493 | 8 | 494 | 2.84e-55 | 193 |
MS.gene50810.t1 | AT3G09140 | 29.960 | 247 | 145 | 9 | 263 | 485 | 1 | 243 | 2.85e-16 | 82.0 |
MS.gene50810.t1 | AT5G37320 | 31.164 | 507 | 293 | 19 | 10 | 493 | 7 | 480 | 5.09e-50 | 179 |
MS.gene50810.t1 | AT3G09140 | 29.020 | 541 | 300 | 17 | 11 | 493 | 8 | 522 | 6.46e-50 | 179 |
MS.gene50810.t1 | AT3G09140 | 30.189 | 212 | 121 | 8 | 263 | 451 | 1 | 208 | 1.00e-12 | 70.9 |
MS.gene50810.t1 | AT3G09110 | 35.030 | 334 | 186 | 11 | 9 | 332 | 6 | 318 | 1.40e-47 | 168 |
MS.gene50810.t1 | AT3G09120 | 31.481 | 324 | 194 | 9 | 13 | 325 | 7 | 313 | 3.34e-42 | 153 |
MS.gene50810.t1 | AT3G09120 | 26.180 | 233 | 154 | 6 | 267 | 486 | 2 | 229 | 6.83e-11 | 63.9 |
MS.gene50810.t1 | AT5G43240 | 32.231 | 363 | 214 | 11 | 165 | 508 | 18 | 367 | 2.19e-39 | 147 |
Find 109 sgRNAs with CRISPR-Local
Find 163 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CATCATTTGAATTGAGATTT+TGG | 0.129092 | 4.1:+80124387 | None:intergenic |
CAATGCTTCACATGGATTTC+TGG | 0.133383 | 4.1:+80124325 | None:intergenic |
CAAGAGAATAATACACAAAA+TGG | 0.224923 | 4.1:-80124149 | MS.gene50810:CDS |
CTTGCAGCTGTTGATGGAAT+TGG | 0.234153 | 4.1:-80124048 | MS.gene50810:CDS |
AGAAAATGGATCATTGTTTC+TGG | 0.236079 | 4.1:-80124114 | MS.gene50810:CDS |
GTCATTGTTGTTGTTATTCC+TGG | 0.237924 | 4.1:+80124466 | None:intergenic |
AGGTCGGTTATCTTTGTTCT+TGG | 0.278077 | 4.1:+80123158 | None:intergenic |
GGATCCGTTGTAAAGCTTCT+TGG | 0.281628 | 4.1:-80122976 | MS.gene50810:CDS |
AGGAGTGATTTCTAAGTCTA+AGG | 0.286294 | 4.1:-80122734 | MS.gene50810:CDS |
ACTACATATTACTATGGTAT+AGG | 0.294051 | 4.1:-80122805 | MS.gene50810:CDS |
CACCAGTGACAACAGGAAAT+TGG | 0.303337 | 4.1:-80123100 | MS.gene50810:CDS |
TATTCCTGGTGGTGGCTAAA+AGG | 0.313041 | 4.1:+80124480 | None:intergenic |
ATCTCAATTCAAATGATGTT+TGG | 0.325115 | 4.1:-80124382 | MS.gene50810:CDS |
CCCTCAGAATCCAAGTTCTT+AGG | 0.332053 | 4.1:+80124173 | None:intergenic |
GGGGTCTTTGTAAGAGAAAA+TGG | 0.335839 | 4.1:-80124128 | MS.gene50810:CDS |
GACTTACTTGCAGCTGTTGA+TGG | 0.339065 | 4.1:-80124054 | MS.gene50810:CDS |
GGAATTGGGGTATTCAGATT+TGG | 0.342273 | 4.1:-80124033 | MS.gene50810:CDS |
CTACGTGAATACTCTGTCTT+AGG | 0.344373 | 4.1:+80122778 | None:intergenic |
GTGAAGAGAGCAGCATTATA+TGG | 0.358751 | 4.1:-80122631 | MS.gene50810:CDS |
TTGCAGCTGTTGATGGAATT+GGG | 0.365599 | 4.1:-80124047 | MS.gene50810:CDS |
CTACATATTACTATGGTATA+GGG | 0.380267 | 4.1:-80122804 | MS.gene50810:CDS |
AATGCTTCACATGGATTTCT+GGG | 0.392435 | 4.1:+80124326 | None:intergenic |
AAGAGAATAATACACAAAAT+GGG | 0.398578 | 4.1:-80124148 | MS.gene50810:CDS |
GTGGGTGGTGGTTGAACTTC+CGG | 0.401357 | 4.1:+80122826 | None:intergenic |
AGCTTCCTTACCATGCCATT+AGG | 0.401925 | 4.1:-80122997 | MS.gene50810:CDS |
ACACGTCCAGCAAAAGAATT+AGG | 0.402172 | 4.1:+80122952 | None:intergenic |
CCACCCACTACATATTACTA+TGG | 0.404760 | 4.1:-80122811 | MS.gene50810:CDS |
CAAAGGCTCATCAGAGGTTA+AGG | 0.411865 | 4.1:+80123206 | None:intergenic |
AAACCAGCCCCTCAACATTC+CGG | 0.416958 | 4.1:-80122845 | MS.gene50810:CDS |
TTCTTAGGCTGTCTATTAGT+GGG | 0.418576 | 4.1:+80124188 | None:intergenic |
TCTCGGTTCCATTGCAATCA+AGG | 0.422873 | 4.1:+80122690 | None:intergenic |
ACTGCTGATGCAAGTTGGTT+AGG | 0.427676 | 4.1:+80123138 | None:intergenic |
GTTCTTAGGCTGTCTATTAG+TGG | 0.429169 | 4.1:+80124187 | None:intergenic |
CTTCCGGAATGTTGAGGGGC+TGG | 0.432152 | 4.1:+80122842 | None:intergenic |
TTCAGATTTGGCTCAAATAG+AGG | 0.433676 | 4.1:-80124021 | MS.gene50810:CDS |
AATTCCCCTCAAAATGTTAG+TGG | 0.442870 | 4.1:-80124600 | MS.gene50810:CDS |
CTTGATCCGTTGAGGGATCT+CGG | 0.448216 | 4.1:+80122673 | None:intergenic |
GTACAAAAGTGTGGAGAACT+TGG | 0.451915 | 4.1:-80122920 | MS.gene50810:CDS |
TGCCTTGCACCAGTGACAAC+AGG | 0.457008 | 4.1:-80123107 | MS.gene50810:CDS |
ATGGTATTGATTCTGATTGT+TGG | 0.459184 | 4.1:+80124444 | None:intergenic |
TTGAACTTCCGGAATGTTGA+GGG | 0.460651 | 4.1:+80122837 | None:intergenic |
CTGGTTTAGGCACACTCAAA+AGG | 0.467866 | 4.1:+80122348 | None:intergenic |
TAATAGACAGCCTAAGAACT+TGG | 0.472478 | 4.1:-80124183 | MS.gene50810:CDS |
AGCAAAATCCTTGATTGCAA+TGG | 0.473177 | 4.1:-80122698 | MS.gene50810:CDS |
ATGTCTGTGTTACTCGATCC+TGG | 0.473190 | 4.1:-80122892 | MS.gene50810:CDS |
GTTGAACTTCCGGAATGTTG+AGG | 0.473700 | 4.1:+80122836 | None:intergenic |
AACAGCATTTGTTTGCAGAC+AGG | 0.475302 | 4.1:+80124353 | None:intergenic |
ATCCAATTTCCTGTTGTCAC+TGG | 0.480035 | 4.1:+80123098 | None:intergenic |
AGAGCAGCATTATATGGTAT+AGG | 0.480188 | 4.1:-80122625 | MS.gene50810:CDS |
GCTGGTTTAGACAACTAAAC+TGG | 0.481695 | 4.1:+80122860 | None:intergenic |
TGGTGCCAAGTGGAAGAGAT+AGG | 0.487529 | 4.1:+80124510 | None:intergenic |
GGATCAAGAGATGATGCTAC+TGG | 0.488902 | 4.1:-80122658 | MS.gene50810:CDS |
AGCTTCCTATCTCTTCCACT+TGG | 0.491188 | 4.1:-80124515 | MS.gene50810:CDS |
ATCATCTCTTGATCCGTTGA+GGG | 0.492757 | 4.1:+80122666 | None:intergenic |
TTGATGTCAAGAATGCTTGA+AGG | 0.493162 | 4.1:+80122399 | None:intergenic |
AGCTTTACAACGGATCCTAA+TGG | 0.495250 | 4.1:+80122982 | None:intergenic |
GTTGTTGTTATTCCTGGTGG+TGG | 0.496331 | 4.1:+80124472 | None:intergenic |
GAAGTCAACAAAATCTCCAT+TGG | 0.498206 | 4.1:+80123026 | None:intergenic |
TAGCTTGCACCGTTATATAG+AGG | 0.502779 | 4.1:-80122758 | MS.gene50810:CDS |
GAAAGTGTCAACAAAGTCCT+TGG | 0.507259 | 4.1:+80124541 | None:intergenic |
CAGAATCTTGATTGTACCTG+TGG | 0.516497 | 4.1:-80124215 | MS.gene50810:CDS |
GCCTAAGAACTTGGATTCTG+AGG | 0.520425 | 4.1:-80124174 | MS.gene50810:CDS |
AGGAAAGAATCAGAAGAAAG+TGG | 0.520631 | 4.1:+80122583 | None:intergenic |
CTAAACTGGTGTGCTATACC+AGG | 0.532086 | 4.1:+80122874 | None:intergenic |
CTCTAACTGCTGATGCAAGT+TGG | 0.535856 | 4.1:+80123133 | None:intergenic |
TTAAATCTTTCAAATATGAA+AGG | 0.539040 | 4.1:+80122563 | None:intergenic |
AAGTAAGTCACAGACGAACT+TGG | 0.543235 | 4.1:+80124068 | None:intergenic |
TCAAGATTTACCTTGACTAG+TGG | 0.544138 | 4.1:-80122380 | MS.gene50810:CDS |
CTTCAAGATCATCAAGAGGA+AGG | 0.549012 | 4.1:+80122539 | None:intergenic |
TTTCTGATGTTGTCAAGGAA+TGG | 0.556391 | 4.1:+80124425 | None:intergenic |
TTGTAGCTGTTCAGAAGCCA+TGG | 0.558598 | 4.1:+80124637 | None:intergenic |
TTCCTGTTGTCACTGGTGCA+AGG | 0.566131 | 4.1:+80123105 | None:intergenic |
GGAGTGATTTCTAAGTCTAA+GGG | 0.566521 | 4.1:-80122733 | MS.gene50810:CDS |
TCACTCCTCCCTCTATATAA+CGG | 0.567399 | 4.1:+80122749 | None:intergenic |
CTGATGCAAGTTGGTTAGGT+CGG | 0.567745 | 4.1:+80123142 | None:intergenic |
ATAATCTTTGCAGAAACCAA+TGG | 0.568343 | 4.1:-80123042 | MS.gene50810:CDS |
TGGTAATTTGTACAAAAGTG+TGG | 0.569416 | 4.1:-80122929 | MS.gene50810:CDS |
TCTTGATGATCTTGAAGTGA+AGG | 0.571298 | 4.1:-80122533 | MS.gene50810:CDS |
CATCATCTCTTGATCCGTTG+AGG | 0.577105 | 4.1:+80122665 | None:intergenic |
GTCTTTAAGTCCACTAGTCA+AGG | 0.577600 | 4.1:+80122370 | None:intergenic |
CGGATCCTAATGGCATGGTA+AGG | 0.586168 | 4.1:+80122992 | None:intergenic |
AGAGGTTTCTGATGTTGTCA+AGG | 0.592804 | 4.1:+80124420 | None:intergenic |
TAGTAATATGTAGTGGGTGG+TGG | 0.598894 | 4.1:+80122814 | None:intergenic |
TTCATACACAATGCTTCACA+TGG | 0.602627 | 4.1:+80124317 | None:intergenic |
ATTGTTGTTGTTATTCCTGG+TGG | 0.607529 | 4.1:+80124469 | None:intergenic |
AGCTTGCACCGTTATATAGA+GGG | 0.609591 | 4.1:-80122757 | MS.gene50810:CDS |
AAATGTTAGTGGACAAACAA+AGG | 0.609948 | 4.1:-80124589 | MS.gene50810:CDS |
ATACCATAGTAATATGTAGT+GGG | 0.610428 | 4.1:+80122808 | None:intergenic |
TGCAGCTGTTGATGGAATTG+GGG | 0.616569 | 4.1:-80124046 | MS.gene50810:CDS |
AGAGAATAATACACAAAATG+GGG | 0.618529 | 4.1:-80124147 | MS.gene50810:CDS |
CCTAAGAACTTGGATTCTGA+GGG | 0.620194 | 4.1:-80124173 | MS.gene50810:CDS |
ACAAAACATTGGCAAACAAG+AGG | 0.622350 | 4.1:-80123991 | MS.gene50810:intron |
GAGGAAGTCACACAAAACAT+TGG | 0.622642 | 4.1:-80124002 | MS.gene50810:CDS |
TATACCATAGTAATATGTAG+TGG | 0.628329 | 4.1:+80122807 | None:intergenic |
TTCACTTCAAGATCATCAAG+AGG | 0.629431 | 4.1:+80122535 | None:intergenic |
AGGTTAAGGTATGCTTGAGG+AGG | 0.635555 | 4.1:+80123220 | None:intergenic |
GATAAGCATTGGTGAAGCTG+AGG | 0.638424 | 4.1:-80122509 | MS.gene50810:intron |
CCATAGTAATATGTAGTGGG+TGG | 0.647197 | 4.1:+80122811 | None:intergenic |
TACAACGGATCCTAATGGCA+TGG | 0.650564 | 4.1:+80122987 | None:intergenic |
GAAGTGAAGGTGATAAGCAT+TGG | 0.654807 | 4.1:-80122520 | MS.gene50810:CDS |
ATTTGTCAAAGGCTCATCAG+AGG | 0.659166 | 4.1:+80123200 | None:intergenic |
TGAACTTCCGGAATGTTGAG+GGG | 0.660190 | 4.1:+80122838 | None:intergenic |
CAGAGGTTAAGGTATGCTTG+AGG | 0.671381 | 4.1:+80123217 | None:intergenic |
ATGGAACCGAGATCCCTCAA+CGG | 0.675491 | 4.1:-80122679 | MS.gene50810:CDS |
TTGCACCGTTATATAGAGGG+AGG | 0.682014 | 4.1:-80122754 | MS.gene50810:CDS |
AGGTCCAAGAAGCTTTACAA+CGG | 0.693741 | 4.1:+80122972 | None:intergenic |
AGGCGAACGATGGTGCCAAG+TGG | 0.699497 | 4.1:+80124500 | None:intergenic |
GGTGGCTAAAAGGCGAACGA+TGG | 0.723514 | 4.1:+80124490 | None:intergenic |
GATCGAGTAACACAGACATG+CGG | 0.763585 | 4.1:+80122896 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AAAATAGATCTATTAAAGAA+AGG | + | chr4.1:80123627-80123646 | None:intergenic | 15.0% |
!! | ACAAAAATAAAGAAATACTA+TGG | - | chr4.1:80123120-80123139 | MS.gene50810:CDS | 15.0% |
!! | CAAAAATAAAGAAATACTAT+GGG | - | chr4.1:80123121-80123140 | MS.gene50810:CDS | 15.0% |
!! | TTAAATCTTTCAAATATGAA+AGG | + | chr4.1:80124388-80124407 | None:intergenic | 15.0% |
!! | AAGAGAATAATACACAAAAT+GGG | - | chr4.1:80122800-80122819 | MS.gene50810:CDS | 20.0% |
!! | AATATCAAATAATAGTCGTA+TGG | + | chr4.1:80123295-80123314 | None:intergenic | 20.0% |
!! | AATTAACAAATTCAATGCAA+TGG | + | chr4.1:80123030-80123049 | None:intergenic | 20.0% |
!! | ATTAACAAATTCAATGCAAT+GGG | + | chr4.1:80123029-80123048 | None:intergenic | 20.0% |
!! | TAATTAAAAAAATTGCATCC+TGG | - | chr4.1:80123375-80123394 | MS.gene50810:intron | 20.0% |
!! | TTGTTAATTTCACAATCATT+TGG | - | chr4.1:80123041-80123060 | MS.gene50810:CDS | 20.0% |
!!! | AACTTTTAGTTGAAATCTAA+AGG | - | chr4.1:80123199-80123218 | MS.gene50810:CDS | 20.0% |
!!! | TTTTTTTGTTAGAAAACATG+TGG | - | chr4.1:80123538-80123557 | MS.gene50810:intron | 20.0% |
! | ACAAGAAAAAGCAATACTAT+GGG | - | chr4.1:80123164-80123183 | MS.gene50810:CDS | 25.0% |
! | ACTACATATTACTATGGTAT+AGG | - | chr4.1:80124143-80124162 | MS.gene50810:CDS | 25.0% |
! | AGAGAATAATACACAAAATG+GGG | - | chr4.1:80122801-80122820 | MS.gene50810:CDS | 25.0% |
! | ATACCATAGTAATATGTAGT+GGG | + | chr4.1:80124143-80124162 | None:intergenic | 25.0% |
! | ATATATTAAATCTAGCCACT+TGG | - | chr4.1:80123090-80123109 | MS.gene50810:CDS | 25.0% |
! | ATCTCAATTCAAATGATGTT+TGG | - | chr4.1:80122566-80122585 | MS.gene50810:CDS | 25.0% |
! | CAAGAGAATAATACACAAAA+TGG | - | chr4.1:80122799-80122818 | MS.gene50810:CDS | 25.0% |
! | CATTTACCAAACATTCTTAT+CGG | + | chr4.1:80123233-80123252 | None:intergenic | 25.0% |
! | CTACATATTACTATGGTATA+GGG | - | chr4.1:80124144-80124163 | MS.gene50810:CDS | 25.0% |
! | GCAAAAAATGTATTTGTCAA+AGG | + | chr4.1:80123762-80123781 | None:intergenic | 25.0% |
! | TACAAGAAAAAGCAATACTA+TGG | - | chr4.1:80123163-80123182 | MS.gene50810:CDS | 25.0% |
! | TATACCATAGTAATATGTAG+TGG | + | chr4.1:80124144-80124163 | None:intergenic | 25.0% |
!! | ACTTTGAAAAAAGTTGATTC+TGG | + | chr4.1:80124622-80124641 | None:intergenic | 25.0% |
!! | ATTTGAATTGAGATTTTGGA+CGG | + | chr4.1:80122560-80122579 | None:intergenic | 25.0% |
!! | CATCATTTGAATTGAGATTT+TGG | + | chr4.1:80122564-80122583 | None:intergenic | 25.0% |
!!! | AAAAAAGTTGATTCTGGTTT+AGG | + | chr4.1:80124616-80124635 | None:intergenic | 25.0% |
!!! | AGTATTGCTTTTTCTTGTAT+TGG | + | chr4.1:80123162-80123181 | None:intergenic | 25.0% |
!!! | GTATTGCTTTTTCTTGTATT+GGG | + | chr4.1:80123161-80123180 | None:intergenic | 25.0% |
AGAAAATGGATCATTGTTTC+TGG | - | chr4.1:80122834-80122853 | MS.gene50810:CDS | 30.0% | |
ATAATCTTTGCAGAAACCAA+TGG | - | chr4.1:80123906-80123925 | MS.gene50810:intron | 30.0% | |
CACACAAAAAACTTACTTGA+TGG | + | chr4.1:80122685-80122704 | None:intergenic | 30.0% | |
TTTGTCTCTTTGATTCACTT+TGG | - | chr4.1:80124504-80124523 | MS.gene50810:CDS | 30.0% | |
! | AAATGTTAGTGGACAAACAA+AGG | - | chr4.1:80122359-80122378 | MS.gene50810:CDS | 30.0% |
! | ACAAAGTATGAGAGAGTATA+AGG | - | chr4.1:80123342-80123361 | MS.gene50810:intron | 30.0% |
! | ATTTTTGTCAATTAGCCAAG+TGG | + | chr4.1:80123108-80123127 | None:intergenic | 30.0% |
! | TGGTAATTTGTACAAAAGTG+TGG | - | chr4.1:80124019-80124038 | MS.gene50810:CDS | 30.0% |
! | TTTGTCCACTAACATTTTGA+GGG | + | chr4.1:80122356-80122375 | None:intergenic | 30.0% |
!! | AAGAAAGTGGTTTTACTCTT+AGG | + | chr4.1:80124355-80124374 | None:intergenic | 30.0% |
!! | ATGGTATTGATTCTGATTGT+TGG | + | chr4.1:80122507-80122526 | None:intergenic | 30.0% |
!!! | AAGGAACAAAGTTGTTTTTG+TGG | - | chr4.1:80122378-80122397 | MS.gene50810:CDS | 30.0% |
AACACCACCATATTAGAGTA+AGG | - | chr4.1:80123484-80123503 | MS.gene50810:intron | 35.0% | |
AATGCTTCACATGGATTTCT+GGG | + | chr4.1:80122625-80122644 | None:intergenic | 35.0% | |
AATTCCCCTCAAAATGTTAG+TGG | - | chr4.1:80122348-80122367 | MS.gene50810:CDS | 35.0% | |
ACAAAACATTGGCAAACAAG+AGG | - | chr4.1:80122957-80122976 | MS.gene50810:CDS | 35.0% | |
AGAGCAGCATTATATGGTAT+AGG | - | chr4.1:80124323-80124342 | MS.gene50810:CDS | 35.0% | |
AGCAAAATCCTTGATTGCAA+TGG | - | chr4.1:80124250-80124269 | MS.gene50810:CDS | 35.0% | |
AGGAAAGAATCAGAAGAAAG+TGG | + | chr4.1:80124368-80124387 | None:intergenic | 35.0% | |
AGGAGTGATTTCTAAGTCTA+AGG | - | chr4.1:80124214-80124233 | MS.gene50810:CDS | 35.0% | |
CTAGTGACCTTACTCTAATA+TGG | + | chr4.1:80123494-80123513 | None:intergenic | 35.0% | |
GAAGTCAACAAAATCTCCAT+TGG | + | chr4.1:80123925-80123944 | None:intergenic | 35.0% | |
GGAGTGATTTCTAAGTCTAA+GGG | - | chr4.1:80124215-80124234 | MS.gene50810:CDS | 35.0% | |
TAATAGACAGCCTAAGAACT+TGG | - | chr4.1:80122765-80122784 | MS.gene50810:CDS | 35.0% | |
TAGAAAACATGTGGTTTCAG+CGG | - | chr4.1:80123547-80123566 | MS.gene50810:intron | 35.0% | |
TCAAGATTTACCTTGACTAG+TGG | - | chr4.1:80124568-80124587 | MS.gene50810:CDS | 35.0% | |
TTCACTTCAAGATCATCAAG+AGG | + | chr4.1:80124416-80124435 | None:intergenic | 35.0% | |
TTCATACACAATGCTTCACA+TGG | + | chr4.1:80122634-80122653 | None:intergenic | 35.0% | |
TTCTTAGGCTGTCTATTAGT+GGG | + | chr4.1:80122763-80122782 | None:intergenic | 35.0% | |
TTGATGTCAAGAATGCTTGA+AGG | + | chr4.1:80124552-80124571 | None:intergenic | 35.0% | |
TTTCTGATGTTGTCAAGGAA+TGG | + | chr4.1:80122526-80122545 | None:intergenic | 35.0% | |
! | AATTGAGATTTTGGACGGTA+CGG | + | chr4.1:80122555-80122574 | None:intergenic | 35.0% |
! | ATTGTTGTTGTTATTCCTGG+TGG | + | chr4.1:80122482-80122501 | None:intergenic | 35.0% |
! | GTCATTGTTGTTGTTATTCC+TGG | + | chr4.1:80122485-80122504 | None:intergenic | 35.0% |
! | GTTTGTCCACTAACATTTTG+AGG | + | chr4.1:80122357-80122376 | None:intergenic | 35.0% |
! | TCTTGATGATCTTGAAGTGA+AGG | - | chr4.1:80124415-80124434 | MS.gene50810:CDS | 35.0% |
! | TTCAGATTTGGCTCAAATAG+AGG | - | chr4.1:80122927-80122946 | MS.gene50810:CDS | 35.0% |
! | TTGTCCACTAACATTTTGAG+GGG | + | chr4.1:80122355-80122374 | None:intergenic | 35.0% |
!! | TAAGCACCGATAAGAATGTT+TGG | - | chr4.1:80123224-80123243 | MS.gene50810:CDS | 35.0% |
AAAAATTGCATCCTGGCACA+AGG | - | chr4.1:80123382-80123401 | MS.gene50810:intron | 40.0% | |
AACAGCATTTGTTTGCAGAC+AGG | + | chr4.1:80122598-80122617 | None:intergenic | 40.0% | |
AAGTAAGTCACAGACGAACT+TGG | + | chr4.1:80122883-80122902 | None:intergenic | 40.0% | |
ACACGTCCAGCAAAAGAATT+AGG | + | chr4.1:80123999-80124018 | None:intergenic | 40.0% | |
AGAGGTTTCTGATGTTGTCA+AGG | + | chr4.1:80122531-80122550 | None:intergenic | 40.0% | |
AGCTTGCACCGTTATATAGA+GGG | - | chr4.1:80124191-80124210 | MS.gene50810:CDS | 40.0% | |
AGCTTTACAACGGATCCTAA+TGG | + | chr4.1:80123969-80123988 | None:intergenic | 40.0% | |
AGGTCCAAGAAGCTTTACAA+CGG | + | chr4.1:80123979-80123998 | None:intergenic | 40.0% | |
AGGTCGGTTATCTTTGTTCT+TGG | + | chr4.1:80123793-80123812 | None:intergenic | 40.0% | |
ATCATCTCTTGATCCGTTGA+GGG | + | chr4.1:80124285-80124304 | None:intergenic | 40.0% | |
ATCCAATTTCCTGTTGTCAC+TGG | + | chr4.1:80123853-80123872 | None:intergenic | 40.0% | |
ATTCACTTTGGTTGTTGTGC+AGG | - | chr4.1:80124516-80124535 | MS.gene50810:CDS | 40.0% | |
ATTTGTCAAAGGCTCATCAG+AGG | + | chr4.1:80123751-80123770 | None:intergenic | 40.0% | |
CAATGCTTCACATGGATTTC+TGG | + | chr4.1:80122626-80122645 | None:intergenic | 40.0% | |
CAGAATCTTGATTGTACCTG+TGG | - | chr4.1:80122733-80122752 | MS.gene50810:CDS | 40.0% | |
CCACCCACTACATATTACTA+TGG | - | chr4.1:80124137-80124156 | MS.gene50810:CDS | 40.0% | |
CCTAAGAACTTGGATTCTGA+GGG | - | chr4.1:80122775-80122794 | MS.gene50810:CDS | 40.0% | |
CTACGTGAATACTCTGTCTT+AGG | + | chr4.1:80124173-80124192 | None:intergenic | 40.0% | |
CTTCAAGATCATCAAGAGGA+AGG | + | chr4.1:80124412-80124431 | None:intergenic | 40.0% | |
GAAGTGAAGGTGATAAGCAT+TGG | - | chr4.1:80124428-80124447 | MS.gene50810:CDS | 40.0% | |
GAGGAAGTCACACAAAACAT+TGG | - | chr4.1:80122946-80122965 | MS.gene50810:CDS | 40.0% | |
GGGGTCTTTGTAAGAGAAAA+TGG | - | chr4.1:80122820-80122839 | MS.gene50810:CDS | 40.0% | |
GTCTTTAAGTCCACTAGTCA+AGG | + | chr4.1:80124581-80124600 | None:intergenic | 40.0% | |
GTGAAGAGAGCAGCATTATA+TGG | - | chr4.1:80124317-80124336 | MS.gene50810:CDS | 40.0% | |
GTGACCTTACTCTAATATGG+TGG | + | chr4.1:80123491-80123510 | None:intergenic | 40.0% | |
GTTCTTAGGCTGTCTATTAG+TGG | + | chr4.1:80122764-80122783 | None:intergenic | 40.0% | |
TCACTCCTCCCTCTATATAA+CGG | + | chr4.1:80124202-80124221 | None:intergenic | 40.0% | |
TTGAACTTCCGGAATGTTGA+GGG | + | chr4.1:80124114-80124133 | None:intergenic | 40.0% | |
! | AATTCTTTTGCTGGACGTGT+TGG | - | chr4.1:80123999-80124018 | MS.gene50810:CDS | 40.0% |
! | CCATAGTAATATGTAGTGGG+TGG | + | chr4.1:80124140-80124159 | None:intergenic | 40.0% |
! | CTTGGACCTAATTCTTTTGC+TGG | - | chr4.1:80123990-80124009 | MS.gene50810:intron | 40.0% |
! | GCTGGTTTAGACAACTAAAC+TGG | + | chr4.1:80124091-80124110 | None:intergenic | 40.0% |
! | GGAATTGGGGTATTCAGATT+TGG | - | chr4.1:80122915-80122934 | MS.gene50810:CDS | 40.0% |
! | GTACAAAAGTGTGGAGAACT+TGG | - | chr4.1:80124028-80124047 | MS.gene50810:CDS | 40.0% |
! | TAGCTTGCACCGTTATATAG+AGG | - | chr4.1:80124190-80124209 | MS.gene50810:CDS | 40.0% |
! | TTGCAGCTGTTGATGGAATT+GGG | - | chr4.1:80122901-80122920 | MS.gene50810:CDS | 40.0% |
!! | GAAAGTGTCAACAAAGTCCT+TGG | + | chr4.1:80122410-80122429 | None:intergenic | 40.0% |
!! | TAGTAATATGTAGTGGGTGG+TGG | + | chr4.1:80124137-80124156 | None:intergenic | 40.0% |
!! | TGTTTTTGTGGAAGCAACCA+AGG | - | chr4.1:80122390-80122409 | MS.gene50810:CDS | 40.0% |
!!! | TCTATTAGTGGGTTTTCCAC+AGG | + | chr4.1:80122752-80122771 | None:intergenic | 40.0% |
AAGGAAATCCATCGTAACCC+TGG | + | chr4.1:80123608-80123627 | None:intergenic | 45.0% | |
AGCTTCCTATCTCTTCCACT+TGG | - | chr4.1:80122433-80122452 | MS.gene50810:intron | 45.0% | |
AGCTTCCTTACCATGCCATT+AGG | - | chr4.1:80123951-80123970 | MS.gene50810:intron | 45.0% | |
AGGTTAAGGTATGCTTGAGG+AGG | + | chr4.1:80123731-80123750 | None:intergenic | 45.0% | |
CAAAGGCTCATCAGAGGTTA+AGG | + | chr4.1:80123745-80123764 | None:intergenic | 45.0% | |
CACCAGTGACAACAGGAAAT+TGG | - | chr4.1:80123848-80123867 | MS.gene50810:intron | 45.0% | |
CAGAGGTTAAGGTATGCTTG+AGG | + | chr4.1:80123734-80123753 | None:intergenic | 45.0% | |
CATCATCTCTTGATCCGTTG+AGG | + | chr4.1:80124286-80124305 | None:intergenic | 45.0% | |
CCCTCAGAATCCAAGTTCTT+AGG | + | chr4.1:80122778-80122797 | None:intergenic | 45.0% | |
CTAAACTGGTGTGCTATACC+AGG | + | chr4.1:80124077-80124096 | None:intergenic | 45.0% | |
CTCTAACTGCTGATGCAAGT+TGG | + | chr4.1:80123818-80123837 | None:intergenic | 45.0% | |
CTGGTTTAGGCACACTCAAA+AGG | + | chr4.1:80124603-80124622 | None:intergenic | 45.0% | |
GACTTACTTGCAGCTGTTGA+TGG | - | chr4.1:80122894-80122913 | MS.gene50810:CDS | 45.0% | |
GATCGAGTAACACAGACATG+CGG | + | chr4.1:80124055-80124074 | None:intergenic | 45.0% | |
GCCTAAGAACTTGGATTCTG+AGG | - | chr4.1:80122774-80122793 | MS.gene50810:CDS | 45.0% | |
GGATCAAGAGATGATGCTAC+TGG | - | chr4.1:80124290-80124309 | MS.gene50810:CDS | 45.0% | |
GGATCCGTTGTAAAGCTTCT+TGG | - | chr4.1:80123972-80123991 | MS.gene50810:intron | 45.0% | |
GTTGAACTTCCGGAATGTTG+AGG | + | chr4.1:80124115-80124134 | None:intergenic | 45.0% | |
TACAACGGATCCTAATGGCA+TGG | + | chr4.1:80123964-80123983 | None:intergenic | 45.0% | |
TCTCGGTTCCATTGCAATCA+AGG | + | chr4.1:80124261-80124280 | None:intergenic | 45.0% | |
TGAACTTCCGGAATGTTGAG+GGG | + | chr4.1:80124113-80124132 | None:intergenic | 45.0% | |
TTGCACCGTTATATAGAGGG+AGG | - | chr4.1:80124194-80124213 | MS.gene50810:CDS | 45.0% | |
TTGGTGAAGCTGAGGTAATG+TGG | - | chr4.1:80124447-80124466 | MS.gene50810:CDS | 45.0% | |
! | ACTGAAGCATCTCTTCTCAG+AGG | - | chr4.1:80123572-80123591 | MS.gene50810:intron | 45.0% |
! | ATGTCTGTGTTACTCGATCC+TGG | - | chr4.1:80124056-80124075 | MS.gene50810:CDS | 45.0% |
! | CTTGCAGCTGTTGATGGAAT+TGG | - | chr4.1:80122900-80122919 | MS.gene50810:CDS | 45.0% |
! | GTTGTTGTTATTCCTGGTGG+TGG | + | chr4.1:80122479-80122498 | None:intergenic | 45.0% |
! | TGCAGCTGTTGATGGAATTG+GGG | - | chr4.1:80122902-80122921 | MS.gene50810:CDS | 45.0% |
!! | ACTGCTGATGCAAGTTGGTT+AGG | + | chr4.1:80123813-80123832 | None:intergenic | 45.0% |
!! | CTGATGCAAGTTGGTTAGGT+CGG | + | chr4.1:80123809-80123828 | None:intergenic | 45.0% |
!! | GATAAGCATTGGTGAAGCTG+AGG | - | chr4.1:80124439-80124458 | MS.gene50810:CDS | 45.0% |
!! | TATTCCTGGTGGTGGCTAAA+AGG | + | chr4.1:80122471-80122490 | None:intergenic | 45.0% |
!!! | TATTATTTGATATTTTATAA+TGG | - | chr4.1:80123301-80123320 | MS.gene50810:intron | 5.0% |
AAACCAGCCCCTCAACATTC+CGG | - | chr4.1:80124103-80124122 | MS.gene50810:CDS | 50.0% | |
AATCCATCGTAACCCTGGAG+TGG | + | chr4.1:80123603-80123622 | None:intergenic | 50.0% | |
ACAAGGTGTGCAAGGATGAC+AGG | - | chr4.1:80123399-80123418 | MS.gene50810:intron | 50.0% | |
ATGGAACCGAGATCCCTCAA+CGG | - | chr4.1:80124269-80124288 | MS.gene50810:CDS | 50.0% | |
CAAGGTGTGCAAGGATGACA+GGG | - | chr4.1:80123400-80123419 | MS.gene50810:intron | 50.0% | |
CGGATCCTAATGGCATGGTA+AGG | + | chr4.1:80123959-80123978 | None:intergenic | 50.0% | |
CTTGATCCGTTGAGGGATCT+CGG | + | chr4.1:80124278-80124297 | None:intergenic | 50.0% | |
TCAGAGGAACTTCCACTCCA+GGG | - | chr4.1:80123588-80123607 | MS.gene50810:intron | 50.0% | |
TTCCTGTTGTCACTGGTGCA+AGG | + | chr4.1:80123846-80123865 | None:intergenic | 50.0% | |
! | GATTTTGGACGGTACGGTAG+AGG | + | chr4.1:80122549-80122568 | None:intergenic | 50.0% |
! | TGGTGCCAAGTGGAAGAGAT+AGG | + | chr4.1:80122441-80122460 | None:intergenic | 50.0% |
ATCCTGGCACAAGGTGTGCA+AGG | - | chr4.1:80123391-80123410 | MS.gene50810:intron | 55.0% | |
ATCCTTGCACACCTTGTGCC+AGG | + | chr4.1:80123396-80123415 | None:intergenic | 55.0% | |
CTCAGAGGAACTTCCACTCC+AGG | - | chr4.1:80123587-80123606 | MS.gene50810:intron | 55.0% | |
CTTCCACTCCAGGGTTACGA+TGG | - | chr4.1:80123597-80123616 | MS.gene50810:intron | 55.0% | |
GGTGGCTAAAAGGCGAACGA+TGG | + | chr4.1:80122461-80122480 | None:intergenic | 55.0% | |
TGCCTTGCACCAGTGACAAC+AGG | - | chr4.1:80123841-80123860 | MS.gene50810:intron | 55.0% | |
! | GTGGGTGGTGGTTGAACTTC+CGG | + | chr4.1:80124125-80124144 | None:intergenic | 55.0% |
! | TTCGCCTTTTAGCCACCACC+AGG | - | chr4.1:80122464-80122483 | MS.gene50810:intron | 55.0% |
CTTCCGGAATGTTGAGGGGC+TGG | + | chr4.1:80124109-80124128 | None:intergenic | 60.0% | |
! | AGGCGAACGATGGTGCCAAG+TGG | + | chr4.1:80122451-80122470 | None:intergenic | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr4.1 | gene | 80122313 | 80124657 | 80122313 | ID=MS.gene50810 |
chr4.1 | mRNA | 80122313 | 80124657 | 80122313 | ID=MS.gene50810.t1;Parent=MS.gene50810 |
chr4.1 | exon | 80123992 | 80124657 | 80123992 | ID=MS.gene50810.t1.exon1;Parent=MS.gene50810.t1 |
chr4.1 | CDS | 80123992 | 80124657 | 80123992 | ID=cds.MS.gene50810.t1;Parent=MS.gene50810.t1 |
chr4.1 | exon | 80122510 | 80123250 | 80122510 | ID=MS.gene50810.t1.exon2;Parent=MS.gene50810.t1 |
chr4.1 | CDS | 80122510 | 80123250 | 80122510 | ID=cds.MS.gene50810.t1;Parent=MS.gene50810.t1 |
chr4.1 | exon | 80122313 | 80122432 | 80122313 | ID=MS.gene50810.t1.exon3;Parent=MS.gene50810.t1 |
chr4.1 | CDS | 80122313 | 80122432 | 80122313 | ID=cds.MS.gene50810.t1;Parent=MS.gene50810.t1 |
Gene Sequence |
Protein sequence |