Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene84620.t1 | XP_013449065.1 | 58.6 | 444 | 100 | 3 | 1 | 361 | 15 | 457 | 7.00E-131 | 477.2 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene84620.t1 | A0A072U0C3 | 58.6 | 444 | 100 | 3 | 1 | 361 | 15 | 457 | 5.1e-131 | 477.2 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene84620.t1 | MTR_7g066310 | 61.141 | 368 | 125 | 3 | 1 | 350 | 13 | 380 | 1.93e-148 | 426 |
MS.gene84620.t1 | MTR_7g066580 | 48.636 | 440 | 130 | 9 | 1 | 346 | 1 | 438 | 5.44e-126 | 370 |
MS.gene84620.t1 | MTR_7g012680 | 50.935 | 428 | 125 | 8 | 1 | 349 | 20 | 441 | 4.89e-123 | 363 |
MS.gene84620.t1 | MTR_7g066350 | 70.968 | 248 | 67 | 2 | 118 | 361 | 211 | 457 | 1.34e-112 | 337 |
MS.gene84620.t1 | MTR_7g066350 | 63.121 | 141 | 47 | 1 | 1 | 141 | 15 | 150 | 3.40e-52 | 181 |
MS.gene84620.t1 | MTR_7g066340 | 45.815 | 454 | 162 | 11 | 1 | 370 | 18 | 471 | 4.89e-107 | 323 |
MS.gene84620.t1 | MTR_7g066400 | 63.241 | 253 | 81 | 3 | 118 | 358 | 190 | 442 | 8.36e-105 | 317 |
MS.gene84620.t1 | MTR_7g066400 | 61.947 | 113 | 23 | 3 | 1 | 110 | 18 | 113 | 3.85e-33 | 129 |
MS.gene84620.t1 | MTR_1g041315 | 68.444 | 225 | 66 | 2 | 118 | 337 | 227 | 451 | 8.30e-103 | 313 |
MS.gene84620.t1 | MTR_1g041315 | 65.254 | 118 | 40 | 1 | 1 | 118 | 20 | 136 | 2.70e-47 | 168 |
MS.gene84620.t1 | MTR_2g029400 | 46.455 | 409 | 128 | 11 | 2 | 343 | 21 | 405 | 3.01e-102 | 308 |
MS.gene84620.t1 | MTR_1g014060 | 46.966 | 379 | 161 | 11 | 4 | 349 | 9 | 380 | 1.49e-94 | 288 |
MS.gene84620.t1 | MTR_7g066570 | 43.197 | 463 | 151 | 15 | 1 | 353 | 20 | 480 | 5.77e-89 | 280 |
MS.gene84620.t1 | MTR_7g066280 | 43.669 | 387 | 108 | 6 | 74 | 350 | 1 | 387 | 7.67e-88 | 272 |
MS.gene84620.t1 | MTR_7g066260 | 58.800 | 250 | 87 | 4 | 112 | 349 | 213 | 458 | 1.30e-83 | 263 |
MS.gene84620.t1 | MTR_7g066260 | 70.536 | 112 | 30 | 2 | 1 | 111 | 21 | 130 | 2.96e-44 | 160 |
MS.gene84620.t1 | MTR_7g066680 | 46.980 | 298 | 93 | 6 | 118 | 350 | 38 | 335 | 1.30e-72 | 230 |
MS.gene84620.t1 | MTR_7g066490 | 39.952 | 413 | 153 | 9 | 1 | 349 | 22 | 403 | 2.42e-72 | 232 |
MS.gene84620.t1 | MTR_7g063920 | 34.856 | 416 | 198 | 7 | 1 | 349 | 17 | 426 | 2.48e-69 | 225 |
MS.gene84620.t1 | MTR_7g063920 | 27.979 | 193 | 119 | 8 | 164 | 347 | 10 | 191 | 8.15e-11 | 63.5 |
MS.gene84620.t1 | MTR_7g058710 | 47.619 | 273 | 99 | 8 | 118 | 350 | 206 | 474 | 2.00e-65 | 216 |
MS.gene84620.t1 | MTR_7g058710 | 56.934 | 137 | 46 | 2 | 1 | 137 | 18 | 141 | 1.36e-41 | 152 |
MS.gene84620.t1 | MTR_7g063880 | 35.129 | 464 | 193 | 16 | 1 | 366 | 17 | 470 | 3.58e-65 | 215 |
MS.gene84620.t1 | MTR_7g058700 | 50.000 | 236 | 79 | 4 | 118 | 353 | 725 | 921 | 1.81e-62 | 216 |
MS.gene84620.t1 | MTR_7g058700 | 61.765 | 102 | 24 | 2 | 9 | 110 | 533 | 619 | 4.15e-30 | 122 |
MS.gene84620.t1 | MTR_7g066360 | 51.867 | 241 | 97 | 4 | 118 | 349 | 215 | 445 | 2.68e-62 | 207 |
MS.gene84620.t1 | MTR_7g066360 | 68.750 | 112 | 33 | 1 | 1 | 112 | 20 | 129 | 1.98e-43 | 157 |
MS.gene84620.t1 | MTR_7g062300 | 33.700 | 454 | 194 | 13 | 1 | 349 | 18 | 469 | 7.99e-62 | 206 |
MS.gene84620.t1 | MTR_7g066290 | 54.202 | 238 | 78 | 5 | 118 | 350 | 219 | 430 | 1.59e-60 | 202 |
MS.gene84620.t1 | MTR_7g066290 | 71.429 | 112 | 29 | 3 | 1 | 111 | 21 | 130 | 5.28e-43 | 155 |
MS.gene84620.t1 | MTR_7g066430 | 40.876 | 274 | 119 | 4 | 118 | 349 | 209 | 481 | 1.06e-56 | 193 |
MS.gene84620.t1 | MTR_7g066430 | 51.818 | 110 | 52 | 1 | 1 | 110 | 10 | 118 | 7.41e-31 | 123 |
MS.gene84620.t1 | MTR_3g065200 | 32.553 | 427 | 174 | 12 | 1 | 340 | 9 | 408 | 1.17e-51 | 179 |
MS.gene84620.t1 | MTR_4g017470 | 30.464 | 453 | 207 | 12 | 1 | 349 | 18 | 466 | 2.78e-50 | 176 |
MS.gene84620.t1 | MTR_4g017470 | 28.774 | 212 | 99 | 6 | 168 | 349 | 15 | 204 | 1.83e-11 | 65.9 |
MS.gene84620.t1 | MTR_7g066410 | 38.267 | 277 | 127 | 4 | 118 | 350 | 233 | 509 | 3.59e-46 | 166 |
MS.gene84620.t1 | MTR_7g066410 | 57.798 | 109 | 45 | 1 | 2 | 110 | 17 | 124 | 4.88e-35 | 135 |
MS.gene84620.t1 | MTR_7g100420 | 32.908 | 392 | 182 | 13 | 1 | 352 | 45 | 395 | 3.48e-41 | 150 |
MS.gene84620.t1 | MTR_7g066390 | 51.724 | 145 | 44 | 1 | 206 | 350 | 1 | 119 | 9.81e-39 | 136 |
MS.gene84620.t1 | MTR_7g063720 | 36.842 | 209 | 116 | 4 | 158 | 350 | 15 | 223 | 2.33e-37 | 135 |
MS.gene84620.t1 | MTR_7g066480 | 38.298 | 235 | 111 | 4 | 118 | 349 | 214 | 417 | 3.04e-37 | 140 |
MS.gene84620.t1 | MTR_7g066480 | 58.621 | 116 | 42 | 2 | 1 | 116 | 22 | 131 | 1.42e-31 | 124 |
MS.gene84620.t1 | MTR_7g062280 | 32.830 | 265 | 138 | 4 | 118 | 349 | 224 | 481 | 4.15e-37 | 140 |
MS.gene84620.t1 | MTR_7g062280 | 52.294 | 109 | 51 | 1 | 1 | 109 | 16 | 123 | 1.51e-27 | 114 |
MS.gene84620.t1 | MTR_4g017830 | 32.740 | 281 | 137 | 3 | 118 | 349 | 220 | 497 | 1.92e-36 | 139 |
MS.gene84620.t1 | MTR_4g017830 | 43.478 | 115 | 59 | 2 | 1 | 109 | 18 | 132 | 3.22e-19 | 89.7 |
MS.gene84620.t1 | MTR_7g063820 | 34.444 | 270 | 134 | 6 | 118 | 350 | 212 | 475 | 1.03e-35 | 136 |
MS.gene84620.t1 | MTR_7g063820 | 54.310 | 116 | 51 | 2 | 1 | 116 | 16 | 129 | 6.38e-29 | 117 |
MS.gene84620.t1 | MTR_4g019310 | 33.808 | 281 | 130 | 8 | 118 | 354 | 223 | 491 | 1.93e-35 | 136 |
MS.gene84620.t1 | MTR_4g019310 | 42.400 | 125 | 55 | 3 | 1 | 117 | 14 | 129 | 1.42e-21 | 96.7 |
MS.gene84620.t1 | MTR_3g007740 | 37.349 | 249 | 133 | 6 | 118 | 349 | 196 | 438 | 2.24e-35 | 135 |
MS.gene84620.t1 | MTR_3g007740 | 52.041 | 98 | 35 | 1 | 1 | 98 | 15 | 100 | 8.73e-21 | 94.0 |
MS.gene84620.t1 | MTR_7g063830 | 34.568 | 243 | 132 | 5 | 118 | 350 | 210 | 435 | 1.07e-33 | 130 |
MS.gene84620.t1 | MTR_7g063830 | 50.909 | 110 | 54 | 0 | 1 | 110 | 16 | 125 | 2.68e-30 | 121 |
MS.gene84620.t1 | MTR_4g019340 | 35.743 | 249 | 132 | 5 | 118 | 341 | 256 | 501 | 8.44e-33 | 129 |
MS.gene84620.t1 | MTR_4g019340 | 43.333 | 120 | 57 | 1 | 1 | 109 | 44 | 163 | 1.23e-19 | 90.9 |
MS.gene84620.t1 | MTR_4g019340 | 34.513 | 113 | 67 | 2 | 4 | 116 | 312 | 417 | 5.06e-12 | 67.8 |
MS.gene84620.t1 | MTR_7g063900 | 62.000 | 100 | 38 | 0 | 1 | 100 | 16 | 115 | 9.12e-33 | 128 |
MS.gene84620.t1 | MTR_7g063900 | 33.091 | 275 | 135 | 7 | 118 | 349 | 210 | 478 | 3.12e-26 | 110 |
MS.gene84620.t1 | MTR_7g063660 | 33.829 | 269 | 135 | 6 | 118 | 350 | 207 | 468 | 2.95e-32 | 127 |
MS.gene84620.t1 | MTR_7g063660 | 54.206 | 107 | 48 | 1 | 1 | 107 | 15 | 120 | 1.35e-31 | 125 |
MS.gene84620.t1 | MTR_7g063670 | 34.902 | 255 | 151 | 6 | 118 | 361 | 208 | 458 | 1.67e-31 | 124 |
MS.gene84620.t1 | MTR_7g063670 | 44.762 | 105 | 45 | 2 | 1 | 105 | 21 | 112 | 6.00e-17 | 82.4 |
MS.gene84620.t1 | MTR_7g063840 | 31.939 | 263 | 141 | 6 | 118 | 349 | 208 | 463 | 9.16e-31 | 122 |
MS.gene84620.t1 | MTR_7g063840 | 56.000 | 100 | 44 | 0 | 1 | 100 | 16 | 115 | 2.31e-27 | 113 |
MS.gene84620.t1 | MTR_7g063890 | 53.448 | 116 | 49 | 2 | 1 | 116 | 33 | 143 | 1.05e-30 | 123 |
MS.gene84620.t1 | MTR_7g063890 | 35.636 | 275 | 128 | 9 | 118 | 349 | 226 | 494 | 1.11e-23 | 102 |
MS.gene84620.t1 | MTR_7g063890 | 26.606 | 218 | 125 | 8 | 164 | 347 | 26 | 242 | 2.30e-12 | 68.6 |
MS.gene84620.t1 | MTR_4g017610 | 32.955 | 264 | 136 | 8 | 118 | 350 | 223 | 476 | 4.09e-29 | 118 |
MS.gene84620.t1 | MTR_4g017610 | 47.414 | 116 | 53 | 3 | 2 | 109 | 20 | 135 | 2.72e-22 | 98.6 |
MS.gene84620.t1 | MTR_4g017550 | 31.228 | 285 | 131 | 8 | 118 | 349 | 197 | 469 | 4.73e-28 | 115 |
MS.gene84620.t1 | MTR_4g017440 | 31.522 | 276 | 142 | 5 | 118 | 349 | 226 | 498 | 5.10e-28 | 115 |
MS.gene84620.t1 | MTR_4g017440 | 44.538 | 119 | 54 | 3 | 1 | 107 | 20 | 138 | 9.02e-20 | 91.3 |
MS.gene84620.t1 | MTR_7g062270 | 54.128 | 109 | 49 | 1 | 1 | 109 | 16 | 123 | 6.99e-28 | 113 |
MS.gene84620.t1 | MTR_7g063850 | 30.290 | 241 | 125 | 6 | 159 | 366 | 60 | 290 | 1.85e-26 | 107 |
MS.gene84620.t1 | MTR_4g017410 | 29.885 | 261 | 149 | 6 | 118 | 349 | 225 | 480 | 2.45e-23 | 102 |
MS.gene84620.t1 | MTR_4g017410 | 47.059 | 119 | 53 | 3 | 1 | 109 | 15 | 133 | 2.93e-23 | 101 |
MS.gene84620.t1 | MTR_2g067310 | 66.129 | 62 | 21 | 0 | 6 | 67 | 58 | 119 | 1.50e-20 | 90.1 |
MS.gene84620.t1 | MTR_8g445860 | 27.313 | 227 | 126 | 3 | 158 | 346 | 6 | 231 | 2.74e-20 | 89.4 |
MS.gene84620.t1 | MTR_8g445860 | 36.709 | 79 | 45 | 1 | 1 | 79 | 19 | 92 | 9.99e-11 | 62.0 |
MS.gene84620.t1 | MTR_0150s0010 | 28.319 | 226 | 120 | 4 | 162 | 346 | 7 | 231 | 3.40e-18 | 83.6 |
MS.gene84620.t1 | MTR_0150s0010 | 39.241 | 79 | 43 | 1 | 1 | 79 | 16 | 89 | 8.20e-11 | 62.0 |
MS.gene84620.t1 | MTR_1g115440 | 29.204 | 226 | 114 | 9 | 165 | 347 | 11 | 233 | 2.90e-17 | 80.9 |
MS.gene84620.t1 | MTR_4g019240 | 47.126 | 87 | 38 | 3 | 2 | 80 | 20 | 106 | 4.02e-16 | 76.3 |
MS.gene84620.t1 | MTR_7g063760 | 47.297 | 74 | 37 | 2 | 289 | 361 | 2 | 74 | 4.67e-14 | 67.4 |
MS.gene84620.t1 | MTR_8g023240 | 28.571 | 266 | 149 | 9 | 118 | 347 | 223 | 483 | 1.30e-12 | 69.7 |
MS.gene84620.t1 | MTR_1g115450 | 37.975 | 79 | 44 | 1 | 1 | 79 | 13 | 86 | 3.50e-12 | 63.9 |
MS.gene84620.t1 | MTR_1g115455 | 32.773 | 119 | 66 | 4 | 1 | 113 | 15 | 125 | 1.11e-11 | 64.7 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene84620.t1 | AT3G09110 | 48.598 | 107 | 54 | 1 | 1 | 107 | 15 | 120 | 1.74e-25 | 106 |
MS.gene84620.t1 | AT5G01140 | 29.167 | 264 | 148 | 7 | 118 | 350 | 193 | 448 | 6.00e-23 | 100 |
MS.gene84620.t1 | AT3G09140 | 45.133 | 113 | 59 | 2 | 1 | 111 | 15 | 126 | 1.29e-22 | 99.8 |
MS.gene84620.t1 | AT3G09140 | 30.712 | 267 | 145 | 6 | 118 | 349 | 228 | 489 | 2.67e-21 | 95.9 |
MS.gene84620.t1 | AT3G09140 | 45.133 | 113 | 59 | 2 | 1 | 111 | 15 | 126 | 1.48e-22 | 99.8 |
MS.gene84620.t1 | AT3G09140 | 30.712 | 267 | 145 | 6 | 118 | 349 | 256 | 517 | 3.62e-21 | 95.5 |
MS.gene84620.t1 | AT5G01120 | 44.762 | 105 | 57 | 1 | 1 | 105 | 15 | 118 | 5.30e-22 | 98.2 |
MS.gene84620.t1 | AT5G01120 | 27.758 | 281 | 142 | 7 | 118 | 349 | 217 | 485 | 2.08e-19 | 90.1 |
MS.gene84620.t1 | AT5G43240 | 42.105 | 114 | 61 | 2 | 1 | 110 | 15 | 127 | 1.59e-21 | 96.7 |
MS.gene84620.t1 | AT5G43240 | 30.258 | 271 | 143 | 9 | 121 | 349 | 223 | 489 | 4.76e-18 | 86.3 |
MS.gene84620.t1 | AT5G43240 | 42.105 | 114 | 61 | 2 | 1 | 110 | 15 | 127 | 1.59e-21 | 96.7 |
MS.gene84620.t1 | AT5G43240 | 30.258 | 271 | 143 | 9 | 121 | 349 | 223 | 489 | 4.76e-18 | 86.3 |
MS.gene84620.t1 | AT5G43240 | 42.105 | 114 | 61 | 2 | 1 | 110 | 15 | 127 | 1.59e-21 | 96.7 |
MS.gene84620.t1 | AT5G43240 | 30.258 | 271 | 143 | 9 | 121 | 349 | 223 | 489 | 4.76e-18 | 86.3 |
MS.gene84620.t1 | AT3G09120 | 44.898 | 98 | 53 | 1 | 1 | 98 | 12 | 108 | 4.84e-20 | 90.1 |
MS.gene84620.t1 | AT5G01150 | 45.000 | 100 | 55 | 0 | 1 | 100 | 15 | 114 | 6.74e-20 | 91.7 |
MS.gene84620.t1 | AT5G01150 | 29.646 | 226 | 119 | 6 | 158 | 349 | 256 | 475 | 6.78e-17 | 82.8 |
MS.gene84620.t1 | AT5G01130 | 30.120 | 249 | 144 | 9 | 118 | 349 | 205 | 440 | 1.44e-19 | 90.5 |
MS.gene84620.t1 | AT5G01130 | 40.367 | 109 | 59 | 1 | 2 | 104 | 16 | 124 | 6.76e-18 | 85.5 |
MS.gene84620.t1 | AT5G43240 | 30.258 | 271 | 143 | 9 | 121 | 349 | 79 | 345 | 4.71e-18 | 85.1 |
MS.gene84620.t1 | AT5G37320 | 40.196 | 102 | 59 | 2 | 5 | 105 | 19 | 119 | 4.72e-17 | 83.2 |
MS.gene84620.t1 | AT5G37320 | 28.500 | 200 | 123 | 5 | 171 | 350 | 277 | 476 | 2.03e-13 | 72.0 |
Find 84 sgRNAs with CRISPR-Local
Find 156 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CAATGTTCAGTTTCATATTT+TGG | 0.076946 | 7.3:-38771903 | None:intergenic |
CTTGATTTATTCTACTATTT+TGG | 0.125934 | 7.3:-38774243 | None:intergenic |
CCCTTTCTTCCACGTCATTA+AGG | 0.156917 | 7.3:-38772927 | None:intergenic |
TGACTGACTTTATCTTTAAA+AGG | 0.177394 | 7.3:+38772377 | MS.gene84620:CDS |
CTAGTAAATCCTCCTGAAAT+AGG | 0.201033 | 7.3:-38772811 | None:intergenic |
CAAGAAATCTATGGGAGTTT+TGG | 0.225060 | 7.3:+38772425 | MS.gene84620:CDS |
CGGCCTCAACCTTTGCATTA+TGG | 0.233958 | 7.3:+38773121 | MS.gene84620:CDS |
GATCCTAAATCCCCTATTTC+AGG | 0.246380 | 7.3:+38772799 | MS.gene84620:CDS |
CCTCCTGAAATAGGGGATTT+AGG | 0.250440 | 7.3:-38772802 | None:intergenic |
CAAAACTCCCATAGATTTCT+TGG | 0.250653 | 7.3:-38772424 | None:intergenic |
TTTCCCAGCAGTATGGAATT+AGG | 0.289408 | 7.3:+38772719 | MS.gene84620:CDS |
TCTTTCTAAATATGAAATAA+TGG | 0.315423 | 7.3:-38772893 | None:intergenic |
ATTTAGACCCAAGAAATCTA+TGG | 0.325037 | 7.3:+38772416 | MS.gene84620:CDS |
TAGTAAATCCTCCTGAAATA+GGG | 0.341655 | 7.3:-38772810 | None:intergenic |
AATATGGAAGCAGTAAAATT+TGG | 0.347826 | 7.3:+38771769 | MS.gene84620:CDS |
TCAACATATTTATAATAGTT+AGG | 0.354311 | 7.3:-38772778 | None:intergenic |
CGTGGCTAAGGAGTCAAATA+TGG | 0.360424 | 7.3:+38771753 | MS.gene84620:CDS |
CCTTTCTTCCACGTCATTAA+GGG | 0.369088 | 7.3:-38772926 | None:intergenic |
CCTCCTCTTTCCCAGCAGTA+TGG | 0.374098 | 7.3:+38772712 | MS.gene84620:CDS |
ACAGAAGAAGTTTGACTTCA+AGG | 0.383899 | 7.3:-38771938 | None:intergenic |
AAAGTTGTTTATGTTGAGGC+TGG | 0.387695 | 7.3:+38771667 | MS.gene84620:CDS |
GCAGTGTTACATGTGCTTCA+AGG | 0.393480 | 7.3:+38772586 | MS.gene84620:CDS |
ATCTTGACCAACAATATATA+TGG | 0.395510 | 7.3:+38771824 | MS.gene84620:CDS |
AGCTTCTTAACATTGCCTTT+AGG | 0.397252 | 7.3:+38771715 | MS.gene84620:CDS |
GAAGTTTGACTTCAAGGGTT+CGG | 0.417488 | 7.3:-38771932 | None:intergenic |
TAGAGGTCCAGTAGCATTCA+TGG | 0.425670 | 7.3:+38772831 | MS.gene84620:CDS |
ACAACTTCTGCTTTGACAAA+CGG | 0.425867 | 7.3:+38773101 | MS.gene84620:CDS |
CAGAAGAAGTTTGACTTCAA+GGG | 0.429394 | 7.3:-38771937 | None:intergenic |
GGTTCCTAATTCCATACTGC+TGG | 0.445404 | 7.3:-38772723 | None:intergenic |
TAAAGATAAAGTCAGTCAAA+GGG | 0.446934 | 7.3:-38772372 | None:intergenic |
AGACAATCCTTCTGAGGAAA+TGG | 0.448457 | 7.3:+38772459 | MS.gene84620:CDS |
AGTTATGTAACGGTAATATC+TGG | 0.450579 | 7.3:-38772744 | None:intergenic |
CCCTTAATGACGTGGAAGAA+AGG | 0.451121 | 7.3:+38772926 | MS.gene84620:CDS |
AAAACTCCCATAGATTTCTT+GGG | 0.461452 | 7.3:-38772423 | None:intergenic |
AAAGAAGCTGTTAGAAAGCT+AGG | 0.462122 | 7.3:+38774207 | MS.gene84620:CDS |
GACTGACTTTATCTTTAAAA+GGG | 0.464589 | 7.3:+38772378 | MS.gene84620:CDS |
TCTGCTTTGACTAACGGTCT+TGG | 0.469260 | 7.3:-38774174 | None:intergenic |
CAGTGTTACATGTGCTTCAA+GGG | 0.473386 | 7.3:+38772587 | MS.gene84620:CDS |
CTACTCAAGCCAAGAAACTC+GGG | 0.477370 | 7.3:+38771868 | MS.gene84620:CDS |
TTCATATTTAGAAAGAATGA+AGG | 0.482812 | 7.3:+38772900 | MS.gene84620:CDS |
TTAAAGATAAAGTCAGTCAA+AGG | 0.488360 | 7.3:-38772373 | None:intergenic |
ACGTGGAAGAAAGGGTCATC+AGG | 0.490313 | 7.3:+38772935 | MS.gene84620:CDS |
GTACATGACTTGGTTGAGTC+CGG | 0.495962 | 7.3:+38772645 | MS.gene84620:CDS |
TCTGCCACCATGAATGCTAC+TGG | 0.496022 | 7.3:-38772838 | None:intergenic |
TGTTTATGTTGAGGCTGGGA+AGG | 0.497836 | 7.3:+38771672 | MS.gene84620:CDS |
GAGTTATGGTGGACAAAGAA+AGG | 0.506158 | 7.3:+38771641 | None:intergenic |
GAAGAAAGTTGTTTATGTTG+AGG | 0.508091 | 7.3:+38771663 | MS.gene84620:CDS |
ATTCCATACTGCTGGGAAAG+AGG | 0.514953 | 7.3:-38772715 | None:intergenic |
GCTACTCAAGCCAAGAAACT+CGG | 0.517391 | 7.3:+38771867 | MS.gene84620:CDS |
TTCACAACCATTTCCTCAGA+AGG | 0.517774 | 7.3:-38772466 | None:intergenic |
GGTCATCAGGATTGGTCGGA+AGG | 0.519466 | 7.3:+38772948 | MS.gene84620:CDS |
TCTGTGACCATATATATTGT+TGG | 0.521715 | 7.3:-38771831 | None:intergenic |
TTTAGACCCAAGAAATCTAT+GGG | 0.526049 | 7.3:+38772417 | MS.gene84620:CDS |
CCTTAATGACGTGGAAGAAA+GGG | 0.526797 | 7.3:+38772927 | MS.gene84620:CDS |
CTGCTGGGAAAGAGGAGGAC+TGG | 0.538147 | 7.3:-38772707 | None:intergenic |
GAAGAAAGGGTCATCAGGAT+TGG | 0.539346 | 7.3:+38772940 | MS.gene84620:CDS |
ATTCATGGTGGCAGATGACT+TGG | 0.541208 | 7.3:+38772846 | MS.gene84620:CDS |
CTTTCTTCCACGTCATTAAG+GGG | 0.544228 | 7.3:-38772925 | None:intergenic |
TCATCATCTGCTTTGACTAA+CGG | 0.545551 | 7.3:-38774180 | None:intergenic |
TCTGACAATAAACATCTATC+CGG | 0.552620 | 7.3:-38772664 | None:intergenic |
ATTTATATAAGTACATGACT+TGG | 0.553155 | 7.3:+38772635 | MS.gene84620:CDS |
TATTGCACGACTCGTGGCTA+AGG | 0.555083 | 7.3:+38771741 | MS.gene84620:CDS |
AGTAAATCCTCCTGAAATAG+GGG | 0.565277 | 7.3:-38772809 | None:intergenic |
TTACCGTTACATAACTACCT+TGG | 0.569352 | 7.3:+38772751 | MS.gene84620:CDS |
GCGCCATAATGCAAAGGTTG+AGG | 0.570536 | 7.3:-38773124 | None:intergenic |
AAAGGGTCATCAGGATTGGT+CGG | 0.579181 | 7.3:+38772944 | MS.gene84620:CDS |
AAGTTGTTTATGTTGAGGCT+GGG | 0.582037 | 7.3:+38771668 | MS.gene84620:CDS |
AGTCGTGCAATAGTACCTAA+AGG | 0.584213 | 7.3:-38771730 | None:intergenic |
AGGTACTATTGCACGACTCG+TGG | 0.591324 | 7.3:+38771735 | MS.gene84620:CDS |
GTTCCTAATTCCATACTGCT+GGG | 0.592684 | 7.3:-38772722 | None:intergenic |
CATCAGGATTGGTCGGAAGG+AGG | 0.604323 | 7.3:+38772951 | MS.gene84620:CDS |
ATTTCAGGAGGATTTACTAG+AGG | 0.604666 | 7.3:+38772814 | MS.gene84620:CDS |
CCTAAATCCCCTATTTCAGG+AGG | 0.607949 | 7.3:+38772802 | MS.gene84620:CDS |
TGAATTGCGCCATAATGCAA+AGG | 0.608544 | 7.3:-38773130 | None:intergenic |
ATAATGGAAATAGAAGACAT+TGG | 0.642081 | 7.3:-38772877 | None:intergenic |
TTACCAAGGTAGTTATGTAA+CGG | 0.643864 | 7.3:-38772754 | None:intergenic |
TACTCAAGCCAAGAAACTCG+GGG | 0.647198 | 7.3:+38771869 | MS.gene84620:CDS |
AGATGTAGACAATCCTTCTG+AGG | 0.651212 | 7.3:+38772453 | MS.gene84620:CDS |
TTTCTTCCACGTCATTAAGG+GGG | 0.652161 | 7.3:-38772924 | None:intergenic |
AAAGATAAAGTCAGTCAAAG+GGG | 0.655613 | 7.3:-38772371 | None:intergenic |
TATAATAGTTAGGATTACCA+AGG | 0.665142 | 7.3:-38772768 | None:intergenic |
CCATACTGCTGGGAAAGAGG+AGG | 0.672268 | 7.3:-38772712 | None:intergenic |
ACTCAAGCCAAGAAACTCGG+GGG | 0.752288 | 7.3:+38771870 | MS.gene84620:CDS |
AGGTCCAGTAGCATTCATGG+TGG | 0.767319 | 7.3:+38772834 | MS.gene84620:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | ATCTAATCATAAATTACAAA+AGG | + | chr7.3:38773880-38773899 | MS.gene84620:intron | 15.0% |
!! | CTAAAAACAAAACAAAAAAT+TGG | - | chr7.3:38773291-38773310 | None:intergenic | 15.0% |
!! | TATAAAATATCATTGATAAG+AGG | + | chr7.3:38773980-38773999 | MS.gene84620:intron | 15.0% |
!! | TCAACATATTTATAATAGTT+AGG | - | chr7.3:38772781-38772800 | None:intergenic | 15.0% |
!! | TCATTTAATAAAACTATAAC+AGG | + | chr7.3:38773776-38773795 | MS.gene84620:intron | 15.0% |
!! | TCTTTCTAAATATGAAATAA+TGG | - | chr7.3:38772896-38772915 | None:intergenic | 15.0% |
!!! | AGTTTTATTAAATGAAAAGT+AGG | - | chr7.3:38773771-38773790 | None:intergenic | 15.0% |
!!! | ATTTGTTTTTTGATAGATAA+AGG | - | chr7.3:38773953-38773972 | None:intergenic | 15.0% |
!!! | ATTTTGTATACTCAAATTTA+GGG | - | chr7.3:38772058-38772077 | None:intergenic | 15.0% |
!!! | GTTTTATTAAATGAAAAGTA+GGG | - | chr7.3:38773770-38773789 | None:intergenic | 15.0% |
!!! | TCTTATCAATGATATTTTAT+AGG | - | chr7.3:38773981-38774000 | None:intergenic | 15.0% |
!! | ATTTATATAAGTACATGACT+TGG | + | chr7.3:38772635-38772654 | MS.gene84620:CDS | 20.0% |
!! | CTAAATTTGAGTATACAAAA+TGG | + | chr7.3:38772057-38772076 | MS.gene84620:intron | 20.0% |
!! | TTCATATTTAGAAAGAATGA+AGG | + | chr7.3:38772900-38772919 | MS.gene84620:CDS | 20.0% |
!!! | ATGCAAACAAATATTGTTTT+AGG | - | chr7.3:38773041-38773060 | None:intergenic | 20.0% |
!!! | CATTTTGTATACTCAAATTT+AGG | - | chr7.3:38772059-38772078 | None:intergenic | 20.0% |
!!! | TGCAAACAAATATTGTTTTA+GGG | - | chr7.3:38773040-38773059 | None:intergenic | 20.0% |
!!! | TTTAGTAATTGATGACTTTT+TGG | + | chr7.3:38773253-38773272 | MS.gene84620:intron | 20.0% |
!!! | TTTTGTATACTCAAATTTAG+GGG | - | chr7.3:38772057-38772076 | None:intergenic | 20.0% |
! | AATATGGAAGCAGTAAAATT+TGG | + | chr7.3:38771769-38771788 | MS.gene84620:CDS | 25.0% |
! | ATCTTGACCAACAATATATA+TGG | + | chr7.3:38771824-38771843 | MS.gene84620:CDS | 25.0% |
! | CATAAACAAATTAAAAGCTC+CGG | + | chr7.3:38773204-38773223 | MS.gene84620:intron | 25.0% |
! | TAAAGATAAAGTCAGTCAAA+GGG | - | chr7.3:38772375-38772394 | None:intergenic | 25.0% |
! | TATAAAACAAACATAGAGAG+TGG | + | chr7.3:38773489-38773508 | MS.gene84620:intron | 25.0% |
! | TATAATAGTTAGGATTACCA+AGG | - | chr7.3:38772771-38772790 | None:intergenic | 25.0% |
! | TTAAAGATAAAGTCAGTCAA+AGG | - | chr7.3:38772376-38772395 | None:intergenic | 25.0% |
!! | ATAATGGAAATAGAAGACAT+TGG | - | chr7.3:38772880-38772899 | None:intergenic | 25.0% |
!! | ATGTAATGTTTTATAACCGA+AGG | - | chr7.3:38774025-38774044 | None:intergenic | 25.0% |
!! | CAATGTTCAGTTTCATATTT+TGG | - | chr7.3:38771906-38771925 | None:intergenic | 25.0% |
!! | GACTGACTTTATCTTTAAAA+GGG | + | chr7.3:38772378-38772397 | MS.gene84620:CDS | 25.0% |
!! | TATTTTCAACTTTGCAATTC+TGG | - | chr7.3:38771969-38771988 | None:intergenic | 25.0% |
!! | TGACTGACTTTATCTTTAAA+AGG | + | chr7.3:38772377-38772396 | MS.gene84620:CDS | 25.0% |
!! | TGTAATGTTTTATAACCGAA+GGG | - | chr7.3:38774024-38774043 | None:intergenic | 25.0% |
!!! | TATACAAAATGGCTTTGTTA+AGG | + | chr7.3:38772068-38772087 | MS.gene84620:intron | 25.0% |
AAAACTCCCATAGATTTCTT+GGG | - | chr7.3:38772426-38772445 | None:intergenic | 30.0% | |
AAAGATAAAGTCAGTCAAAG+GGG | - | chr7.3:38772374-38772393 | None:intergenic | 30.0% | |
AGTTATGTAACGGTAATATC+TGG | - | chr7.3:38772747-38772766 | None:intergenic | 30.0% | |
ATAAGGAAGAAATTGAAGCT+TGG | + | chr7.3:38773566-38773585 | MS.gene84620:intron | 30.0% | |
ATTCATCTCAACAATAAGCA+AGG | - | chr7.3:38773725-38773744 | None:intergenic | 30.0% | |
ATTTAGACCCAAGAAATCTA+TGG | + | chr7.3:38772416-38772435 | MS.gene84620:CDS | 30.0% | |
CATCAAATCTTGGTATGAAT+AGG | + | chr7.3:38772312-38772331 | MS.gene84620:intron | 30.0% | |
CCTTTGACAGAAAAAGAATA+AGG | + | chr7.3:38773549-38773568 | MS.gene84620:intron | 30.0% | |
CGCAATTCATGAATGAAAAA+AGG | + | chr7.3:38773144-38773163 | MS.gene84620:CDS | 30.0% | |
CTCTTTCTTGCTGATATTAA+CGG | - | chr7.3:38772211-38772230 | None:intergenic | 30.0% | |
GAAGAAAGTTGTTTATGTTG+AGG | + | chr7.3:38771663-38771682 | MS.gene84620:CDS | 30.0% | |
GATAATTACTTGATAAAGCG+TGG | + | chr7.3:38773604-38773623 | MS.gene84620:intron | 30.0% | |
TAATCTCTGTCATCAAATCT+TGG | + | chr7.3:38772302-38772321 | MS.gene84620:intron | 30.0% | |
TAGTAAATCCTCCTGAAATA+GGG | - | chr7.3:38772813-38772832 | None:intergenic | 30.0% | |
TCAAACACTAAAAGATTGCA+AGG | - | chr7.3:38773644-38773663 | None:intergenic | 30.0% | |
TCAAGTAATTATCACCCTAT+AGG | - | chr7.3:38773597-38773616 | None:intergenic | 30.0% | |
TCTGACAATAAACATCTATC+CGG | - | chr7.3:38772667-38772686 | None:intergenic | 30.0% | |
TCTGTGACCATATATATTGT+TGG | - | chr7.3:38771834-38771853 | None:intergenic | 30.0% | |
TTACCAAGGTAGTTATGTAA+CGG | - | chr7.3:38772757-38772776 | None:intergenic | 30.0% | |
TTATATCTCGTTCAGAAGTA+TGG | + | chr7.3:38772153-38772172 | MS.gene84620:intron | 30.0% | |
TTTAGACCCAAGAAATCTAT+GGG | + | chr7.3:38772417-38772436 | MS.gene84620:CDS | 30.0% | |
! | AAACTTGTTCCATCAACATT+CGG | - | chr7.3:38772135-38772154 | None:intergenic | 30.0% |
! | CCTTATTCTTTTTCTGTCAA+AGG | - | chr7.3:38773552-38773571 | None:intergenic | 30.0% |
!! | GATTTTGTTTGTTGAAGCAA+AGG | + | chr7.3:38772516-38772535 | MS.gene84620:CDS | 30.0% |
!! | TAGTTAAGTACTCTGAAATC+TGG | + | chr7.3:38773308-38773327 | MS.gene84620:intron | 30.0% |
!! | TTAAACTTCACTTTGGAGTT+TGG | + | chr7.3:38772986-38773005 | MS.gene84620:intron | 30.0% |
AAAGAAGCTGTTAGAAAGCT+AGG | + | chr7.3:38774207-38774226 | MS.gene84620:CDS | 35.0% | |
AAAGTTGTTTATGTTGAGGC+TGG | + | chr7.3:38771667-38771686 | MS.gene84620:CDS | 35.0% | |
AAGTTGTTTATGTTGAGGCT+GGG | + | chr7.3:38771668-38771687 | MS.gene84620:CDS | 35.0% | |
AATATACAGTCAACACATGC+AGG | + | chr7.3:38774069-38774088 | MS.gene84620:intron | 35.0% | |
AATGTGTGAATGAATGCTTG+AGG | + | chr7.3:38773814-38773833 | MS.gene84620:intron | 35.0% | |
ACAACTTCTGCTTTGACAAA+CGG | + | chr7.3:38773101-38773120 | MS.gene84620:CDS | 35.0% | |
ACACTAAAAGATTGCAAGGT+TGG | - | chr7.3:38773640-38773659 | None:intergenic | 35.0% | |
AGCTTCTTAACATTGCCTTT+AGG | + | chr7.3:38771715-38771734 | MS.gene84620:CDS | 35.0% | |
AGTAAATCCTCCTGAAATAG+GGG | - | chr7.3:38772812-38772831 | None:intergenic | 35.0% | |
ATTGTGATGTTTCGATGATC+TGG | + | chr7.3:38773429-38773448 | MS.gene84620:intron | 35.0% | |
ATTTCAGGAGGATTTACTAG+AGG | + | chr7.3:38772814-38772833 | MS.gene84620:CDS | 35.0% | |
CAAAACTCCCATAGATTTCT+TGG | - | chr7.3:38772427-38772446 | None:intergenic | 35.0% | |
CACTGTGTTAAACTTCACTT+TGG | + | chr7.3:38772979-38772998 | MS.gene84620:intron | 35.0% | |
CGTTAATATCAGCAAGAAAG+AGG | + | chr7.3:38772209-38772228 | MS.gene84620:intron | 35.0% | |
CTAGTAAATCCTCCTGAAAT+AGG | - | chr7.3:38772814-38772833 | None:intergenic | 35.0% | |
GAAGCTTGGTTTAACCTATA+GGG | + | chr7.3:38773580-38773599 | MS.gene84620:intron | 35.0% | |
GCAAATTTAACCATACCCTT+CGG | + | chr7.3:38774006-38774025 | MS.gene84620:intron | 35.0% | |
TCAAATTTAGGGGAACTTCT+CGG | - | chr7.3:38772047-38772066 | None:intergenic | 35.0% | |
TCATCATCTGCTTTGACTAA+CGG | - | chr7.3:38774183-38774202 | None:intergenic | 35.0% | |
TGAAGCTTGGTTTAACCTAT+AGG | + | chr7.3:38773579-38773598 | MS.gene84620:intron | 35.0% | |
TTACCGTTACATAACTACCT+TGG | + | chr7.3:38772751-38772770 | MS.gene84620:CDS | 35.0% | |
TTCAGTGAAAGATGTGAGAA+TGG | + | chr7.3:38773462-38773481 | MS.gene84620:intron | 35.0% | |
TTGTGATGTTTCGATGATCT+GGG | + | chr7.3:38773430-38773449 | MS.gene84620:intron | 35.0% | |
! | ACAGAAGAAGTTTGACTTCA+AGG | - | chr7.3:38771941-38771960 | None:intergenic | 35.0% |
! | ATTTGTTTGCATGATGATGC+AGG | + | chr7.3:38773049-38773068 | MS.gene84620:intron | 35.0% |
! | CAAGAAATCTATGGGAGTTT+TGG | + | chr7.3:38772425-38772444 | MS.gene84620:CDS | 35.0% |
! | CAGAAGAAGTTTGACTTCAA+GGG | - | chr7.3:38771940-38771959 | None:intergenic | 35.0% |
! | TGTTTTATAACCGAAGGGTA+TGG | - | chr7.3:38774019-38774038 | None:intergenic | 35.0% |
! | TTTCAAGCTTTGCTCTTTTG+TGG | - | chr7.3:38773181-38773200 | None:intergenic | 35.0% |
! | TTTGTTTGCATGATGATGCA+GGG | + | chr7.3:38773050-38773069 | MS.gene84620:intron | 35.0% |
!! | AATGAATGCTTGAGGTATTG+TGG | + | chr7.3:38773822-38773841 | MS.gene84620:intron | 35.0% |
!! | TGTTCTTGGTTCTAACTCTA+AGG | + | chr7.3:38774145-38774164 | MS.gene84620:intron | 35.0% |
!!! | AATCTATGGGAGTTTTGGAT+TGG | + | chr7.3:38772430-38772449 | MS.gene84620:CDS | 35.0% |
!!! | CTTGAGGTATTGTGGTTTTA+TGG | + | chr7.3:38773830-38773849 | MS.gene84620:intron | 35.0% |
AGATGTAGACAATCCTTCTG+AGG | + | chr7.3:38772453-38772472 | MS.gene84620:CDS | 40.0% | |
AGTCGTGCAATAGTACCTAA+AGG | - | chr7.3:38771733-38771752 | None:intergenic | 40.0% | |
CAGTGTTACATGTGCTTCAA+GGG | + | chr7.3:38772587-38772606 | MS.gene84620:CDS | 40.0% | |
CCTTAATGACGTGGAAGAAA+GGG | + | chr7.3:38772927-38772946 | MS.gene84620:CDS | 40.0% | |
CCTTTCTTCCACGTCATTAA+GGG | - | chr7.3:38772929-38772948 | None:intergenic | 40.0% | |
CTTTCTTCCACGTCATTAAG+GGG | - | chr7.3:38772928-38772947 | None:intergenic | 40.0% | |
GATCCTAAATCCCCTATTTC+AGG | + | chr7.3:38772799-38772818 | MS.gene84620:CDS | 40.0% | |
GTGAAAGATGTGAGAATGGT+AGG | + | chr7.3:38773466-38773485 | MS.gene84620:intron | 40.0% | |
GTTCCTAATTCCATACTGCT+GGG | - | chr7.3:38772725-38772744 | None:intergenic | 40.0% | |
TGAATTGCGCCATAATGCAA+AGG | - | chr7.3:38773133-38773152 | None:intergenic | 40.0% | |
TTCACAACCATTTCCTCAGA+AGG | - | chr7.3:38772469-38772488 | None:intergenic | 40.0% | |
TTTCCCAGCAGTATGGAATT+AGG | + | chr7.3:38772719-38772738 | MS.gene84620:CDS | 40.0% | |
TTTCTTCCACGTCATTAAGG+GGG | - | chr7.3:38772927-38772946 | None:intergenic | 40.0% | |
! | AGACAATCCTTCTGAGGAAA+TGG | + | chr7.3:38772459-38772478 | MS.gene84620:CDS | 40.0% |
! | AGTTTTCTCACCATTCCCTT+GGG | + | chr7.3:38772562-38772581 | MS.gene84620:CDS | 40.0% |
! | GAAGTTTGACTTCAAGGGTT+CGG | - | chr7.3:38771935-38771954 | None:intergenic | 40.0% |
! | TAGTTTTCTCACCATTCCCT+TGG | + | chr7.3:38772561-38772580 | MS.gene84620:CDS | 40.0% |
AGTGTGATGCCGAATGTTGA+TGG | + | chr7.3:38772123-38772142 | MS.gene84620:intron | 45.0% | |
ATTCATGGTGGCAGATGACT+TGG | + | chr7.3:38772846-38772865 | MS.gene84620:CDS | 45.0% | |
ATTCCATACTGCTGGGAAAG+AGG | - | chr7.3:38772718-38772737 | None:intergenic | 45.0% | |
CCCTTAATGACGTGGAAGAA+AGG | + | chr7.3:38772926-38772945 | MS.gene84620:CDS | 45.0% | |
CCCTTTCTTCCACGTCATTA+AGG | - | chr7.3:38772930-38772949 | None:intergenic | 45.0% | |
CCTAAATCCCCTATTTCAGG+AGG | + | chr7.3:38772802-38772821 | MS.gene84620:CDS | 45.0% | |
CCTCCTGAAATAGGGGATTT+AGG | - | chr7.3:38772805-38772824 | None:intergenic | 45.0% | |
CGTGGCTAAGGAGTCAAATA+TGG | + | chr7.3:38771753-38771772 | MS.gene84620:CDS | 45.0% | |
CTACTCAAGCCAAGAAACTC+GGG | + | chr7.3:38771868-38771887 | MS.gene84620:CDS | 45.0% | |
GAACTCCATTATGCAGCATC+CGG | - | chr7.3:38773226-38773245 | None:intergenic | 45.0% | |
GAAGAAAGGGTCATCAGGAT+TGG | + | chr7.3:38772940-38772959 | MS.gene84620:CDS | 45.0% | |
GCAAATCAGAACGAGTACAG+AGG | + | chr7.3:38773855-38773874 | MS.gene84620:intron | 45.0% | |
GCAGTGTTACATGTGCTTCA+AGG | + | chr7.3:38772586-38772605 | MS.gene84620:CDS | 45.0% | |
GCTACTCAAGCCAAGAAACT+CGG | + | chr7.3:38771867-38771886 | MS.gene84620:CDS | 45.0% | |
GGTTCCTAATTCCATACTGC+TGG | - | chr7.3:38772726-38772745 | None:intergenic | 45.0% | |
TAAAAAGCCCCCGAGTTTCT+TGG | - | chr7.3:38771880-38771899 | None:intergenic | 45.0% | |
TACTCAAGCCAAGAAACTCG+GGG | + | chr7.3:38771869-38771888 | MS.gene84620:CDS | 45.0% | |
TAGAGGTCCAGTAGCATTCA+TGG | + | chr7.3:38772831-38772850 | MS.gene84620:CDS | 45.0% | |
TCTGCTTTGACTAACGGTCT+TGG | - | chr7.3:38774177-38774196 | None:intergenic | 45.0% | |
TGTTTATGTTGAGGCTGGGA+AGG | + | chr7.3:38771672-38771691 | MS.gene84620:CDS | 45.0% | |
! | AAAGGGTCATCAGGATTGGT+CGG | + | chr7.3:38772944-38772963 | MS.gene84620:CDS | 45.0% |
! | GTTTTCTCACCATTCCCTTG+GGG | + | chr7.3:38772563-38772582 | MS.gene84620:CDS | 45.0% |
! | TTTTCTCACCATTCCCTTGG+GGG | + | chr7.3:38772564-38772583 | MS.gene84620:CDS | 45.0% |
!! | GTACATGACTTGGTTGAGTC+CGG | + | chr7.3:38772645-38772664 | MS.gene84620:CDS | 45.0% |
AAGCTCCGGATGCTGCATAA+TGG | + | chr7.3:38773218-38773237 | MS.gene84620:intron | 50.0% | |
ACATGTAACACTGCCCCCAA+GGG | - | chr7.3:38772580-38772599 | None:intergenic | 50.0% | |
ACGTGGAAGAAAGGGTCATC+AGG | + | chr7.3:38772935-38772954 | MS.gene84620:CDS | 50.0% | |
ACTCAAGCCAAGAAACTCGG+GGG | + | chr7.3:38771870-38771889 | MS.gene84620:CDS | 50.0% | |
AGGGGAACTTCTCGGTTCAA+TGG | - | chr7.3:38772039-38772058 | None:intergenic | 50.0% | |
AGGTACTATTGCACGACTCG+TGG | + | chr7.3:38771735-38771754 | MS.gene84620:CDS | 50.0% | |
AGGTCCAGTAGCATTCATGG+TGG | + | chr7.3:38772834-38772853 | MS.gene84620:CDS | 50.0% | |
CGGCCTCAACCTTTGCATTA+TGG | + | chr7.3:38773121-38773140 | MS.gene84620:CDS | 50.0% | |
GCGCCATAATGCAAAGGTTG+AGG | - | chr7.3:38773127-38773146 | None:intergenic | 50.0% | |
TATTGCACGACTCGTGGCTA+AGG | + | chr7.3:38771741-38771760 | MS.gene84620:CDS | 50.0% | |
TCTGCCACCATGAATGCTAC+TGG | - | chr7.3:38772841-38772860 | None:intergenic | 50.0% | |
TGCGATGCTCTCACTGTTCT+TGG | + | chr7.3:38774131-38774150 | MS.gene84620:intron | 50.0% | |
CACATGTAACACTGCCCCCA+AGG | - | chr7.3:38772581-38772600 | None:intergenic | 55.0% | |
CCATACTGCTGGGAAAGAGG+AGG | - | chr7.3:38772715-38772734 | None:intergenic | 55.0% | |
CCTCCTCTTTCCCAGCAGTA+TGG | + | chr7.3:38772712-38772731 | MS.gene84620:CDS | 55.0% | |
GAAGGTCCCCCTTAATGACG+TGG | + | chr7.3:38772918-38772937 | MS.gene84620:CDS | 55.0% | |
TAACACTGCCCCCAAGGGAA+TGG | - | chr7.3:38772575-38772594 | None:intergenic | 55.0% | |
!! | CATCAGGATTGGTCGGAAGG+AGG | + | chr7.3:38772951-38772970 | MS.gene84620:CDS | 55.0% |
!! | GGATTGGTCGGAAGGAGGTA+AGG | + | chr7.3:38772956-38772975 | MS.gene84620:intron | 55.0% |
!! | GGTCATCAGGATTGGTCGGA+AGG | + | chr7.3:38772948-38772967 | MS.gene84620:CDS | 55.0% |
CTGCTGGGAAAGAGGAGGAC+TGG | - | chr7.3:38772710-38772729 | None:intergenic | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr7.3 | gene | 38771646 | 38774251 | 38771646 | ID=MS.gene84620 |
chr7.3 | mRNA | 38771646 | 38774251 | 38771646 | ID=MS.gene84620.t1;Parent=MS.gene84620 |
chr7.3 | exon | 38771646 | 38771996 | 38771646 | ID=MS.gene84620.t1.exon1;Parent=MS.gene84620.t1 |
chr7.3 | CDS | 38771646 | 38771996 | 38771646 | ID=cds.MS.gene84620.t1;Parent=MS.gene84620.t1 |
chr7.3 | exon | 38772334 | 38772972 | 38772334 | ID=MS.gene84620.t1.exon2;Parent=MS.gene84620.t1 |
chr7.3 | CDS | 38772334 | 38772972 | 38772334 | ID=cds.MS.gene84620.t1;Parent=MS.gene84620.t1 |
chr7.3 | exon | 38773071 | 38773165 | 38773071 | ID=MS.gene84620.t1.exon3;Parent=MS.gene84620.t1 |
chr7.3 | CDS | 38773071 | 38773165 | 38773071 | ID=cds.MS.gene84620.t1;Parent=MS.gene84620.t1 |
chr7.3 | exon | 38774167 | 38774251 | 38774167 | ID=MS.gene84620.t1.exon4;Parent=MS.gene84620.t1 |
chr7.3 | CDS | 38774167 | 38774251 | 38774167 | ID=cds.MS.gene84620.t1;Parent=MS.gene84620.t1 |
Gene Sequence |
Protein sequence |