Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene70045.t1 | AES86963.2 | 88.6 | 456 | 46 | 2 | 39 | 494 | 21 | 470 | 2.80E-223 | 784.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene70045.t1 | G7JQ87 | 88.6 | 456 | 46 | 2 | 39 | 494 | 21 | 470 | 2.0e-223 | 784.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene70045.t1 | MTR_4g017550 | 85.443 | 474 | 61 | 3 | 23 | 494 | 3 | 470 | 0.0 | 807 |
| MS.gene70045.t1 | MTR_4g017550 | 28.571 | 245 | 127 | 9 | 12 | 233 | 250 | 469 | 3.56e-11 | 65.9 |
| MS.gene70045.t1 | MTR_4g017410 | 70.501 | 539 | 116 | 9 | 1 | 529 | 1 | 506 | 0.0 | 712 |
| MS.gene70045.t1 | MTR_4g017830 | 65.825 | 515 | 155 | 9 | 3 | 506 | 6 | 510 | 0.0 | 643 |
| MS.gene70045.t1 | MTR_4g017440 | 66.279 | 516 | 144 | 9 | 3 | 503 | 8 | 508 | 0.0 | 637 |
| MS.gene70045.t1 | MTR_4g017470 | 65.160 | 531 | 130 | 9 | 1 | 517 | 1 | 490 | 0.0 | 629 |
| MS.gene70045.t1 | MTR_4g019340 | 64.329 | 499 | 127 | 10 | 8 | 487 | 37 | 503 | 0.0 | 590 |
| MS.gene70045.t1 | MTR_4g017610 | 63.030 | 495 | 151 | 10 | 4 | 493 | 8 | 475 | 0.0 | 584 |
| MS.gene70045.t1 | MTR_4g019310 | 42.966 | 526 | 252 | 18 | 1 | 505 | 1 | 499 | 3.90e-111 | 340 |
| MS.gene70045.t1 | MTR_7g066570 | 34.926 | 544 | 276 | 19 | 3 | 516 | 8 | 503 | 2.53e-77 | 254 |
| MS.gene70045.t1 | MTR_7g066350 | 34.933 | 521 | 251 | 14 | 1 | 502 | 1 | 452 | 6.34e-76 | 247 |
| MS.gene70045.t1 | MTR_7g066260 | 35.478 | 513 | 248 | 17 | 3 | 494 | 9 | 459 | 2.68e-74 | 244 |
| MS.gene70045.t1 | MTR_7g066410 | 33.702 | 543 | 266 | 16 | 10 | 498 | 11 | 513 | 3.33e-71 | 236 |
| MS.gene70045.t1 | MTR_7g066410 | 28.226 | 248 | 148 | 6 | 1 | 233 | 276 | 508 | 3.73e-14 | 75.5 |
| MS.gene70045.t1 | MTR_7g066340 | 31.927 | 545 | 274 | 16 | 2 | 523 | 5 | 475 | 7.72e-71 | 234 |
| MS.gene70045.t1 | MTR_7g058710 | 31.181 | 542 | 275 | 16 | 1 | 503 | 1 | 483 | 1.02e-68 | 229 |
| MS.gene70045.t1 | MTR_7g012680 | 33.716 | 522 | 247 | 16 | 3 | 503 | 8 | 451 | 8.22e-67 | 223 |
| MS.gene70045.t1 | MTR_7g066430 | 33.396 | 530 | 284 | 15 | 10 | 509 | 5 | 495 | 2.55e-64 | 218 |
| MS.gene70045.t1 | MTR_7g063900 | 34.231 | 520 | 283 | 17 | 1 | 498 | 1 | 483 | 9.44e-62 | 211 |
| MS.gene70045.t1 | MTR_1g041315 | 30.469 | 512 | 251 | 14 | 5 | 481 | 10 | 451 | 2.57e-61 | 209 |
| MS.gene70045.t1 | MTR_7g063660 | 32.438 | 521 | 290 | 17 | 1 | 503 | 1 | 477 | 3.39e-60 | 206 |
| MS.gene70045.t1 | MTR_7g066360 | 34.578 | 509 | 246 | 19 | 3 | 494 | 8 | 446 | 2.36e-59 | 204 |
| MS.gene70045.t1 | MTR_7g066400 | 31.862 | 521 | 250 | 17 | 2 | 502 | 5 | 440 | 4.13e-59 | 202 |
| MS.gene70045.t1 | MTR_7g063880 | 31.679 | 524 | 275 | 21 | 3 | 503 | 5 | 468 | 1.83e-56 | 196 |
| MS.gene70045.t1 | MTR_7g063890 | 32.955 | 528 | 289 | 17 | 1 | 504 | 19 | 505 | 5.51e-55 | 193 |
| MS.gene70045.t1 | MTR_7g063840 | 31.862 | 521 | 282 | 16 | 4 | 503 | 5 | 473 | 5.82e-55 | 192 |
| MS.gene70045.t1 | MTR_7g066580 | 32.427 | 515 | 242 | 21 | 15 | 497 | 1 | 441 | 1.67e-54 | 190 |
| MS.gene70045.t1 | MTR_7g066580 | 27.823 | 248 | 141 | 7 | 6 | 233 | 212 | 441 | 1.91e-11 | 66.6 |
| MS.gene70045.t1 | MTR_7g062280 | 31.461 | 534 | 287 | 16 | 3 | 503 | 4 | 491 | 2.87e-53 | 188 |
| MS.gene70045.t1 | MTR_7g062300 | 31.434 | 509 | 292 | 16 | 3 | 496 | 6 | 472 | 3.83e-53 | 187 |
| MS.gene70045.t1 | MTR_7g062300 | 30.049 | 203 | 106 | 7 | 254 | 443 | 1 | 180 | 4.27e-11 | 65.5 |
| MS.gene70045.t1 | MTR_7g066290 | 39.466 | 337 | 174 | 12 | 3 | 326 | 9 | 328 | 3.94e-53 | 186 |
| MS.gene70045.t1 | MTR_7g063820 | 32.252 | 524 | 294 | 16 | 1 | 503 | 1 | 484 | 9.34e-52 | 184 |
| MS.gene70045.t1 | MTR_7g063920 | 28.711 | 512 | 274 | 13 | 3 | 503 | 5 | 436 | 3.55e-49 | 176 |
| MS.gene70045.t1 | MTR_7g063830 | 29.658 | 526 | 265 | 17 | 1 | 503 | 1 | 444 | 7.77e-46 | 167 |
| MS.gene70045.t1 | MTR_7g066480 | 37.160 | 331 | 175 | 11 | 10 | 328 | 17 | 326 | 1.35e-43 | 160 |
| MS.gene70045.t1 | MTR_4g019240 | 67.961 | 103 | 32 | 1 | 4 | 105 | 8 | 110 | 1.68e-42 | 150 |
| MS.gene70045.t1 | MTR_4g019240 | 72.549 | 51 | 14 | 0 | 456 | 506 | 113 | 163 | 5.43e-15 | 73.9 |
| MS.gene70045.t1 | MTR_2g029400 | 28.858 | 499 | 240 | 15 | 1 | 485 | 6 | 403 | 5.03e-42 | 155 |
| MS.gene70045.t1 | MTR_7g058700 | 32.133 | 361 | 153 | 12 | 21 | 342 | 531 | 838 | 5.88e-41 | 158 |
| MS.gene70045.t1 | MTR_3g007740 | 29.787 | 517 | 270 | 19 | 1 | 498 | 1 | 443 | 2.01e-39 | 149 |
| MS.gene70045.t1 | MTR_7g063670 | 29.320 | 515 | 278 | 17 | 6 | 503 | 12 | 457 | 2.19e-39 | 149 |
| MS.gene70045.t1 | MTR_3g065200 | 28.659 | 492 | 261 | 18 | 10 | 491 | 4 | 415 | 2.57e-38 | 146 |
| MS.gene70045.t1 | MTR_7g066490 | 29.779 | 497 | 236 | 16 | 10 | 498 | 17 | 408 | 4.44e-37 | 142 |
| MS.gene70045.t1 | MTR_7g066280 | 26.201 | 458 | 263 | 15 | 95 | 523 | 1 | 412 | 1.55e-30 | 123 |
| MS.gene70045.t1 | MTR_1g014060 | 33.610 | 241 | 131 | 9 | 18 | 245 | 9 | 233 | 2.54e-25 | 108 |
| MS.gene70045.t1 | MTR_1g014060 | 33.486 | 218 | 99 | 6 | 295 | 503 | 210 | 390 | 1.19e-15 | 79.3 |
| MS.gene70045.t1 | MTR_7g066680 | 32.130 | 277 | 147 | 9 | 214 | 476 | 37 | 286 | 2.16e-23 | 101 |
| MS.gene70045.t1 | MTR_7g066310 | 30.224 | 268 | 123 | 4 | 265 | 523 | 193 | 405 | 4.93e-23 | 101 |
| MS.gene70045.t1 | MTR_7g066310 | 39.103 | 156 | 77 | 7 | 8 | 153 | 6 | 153 | 2.40e-22 | 99.8 |
| MS.gene70045.t1 | MTR_8g023240 | 24.518 | 363 | 219 | 10 | 9 | 347 | 37 | 368 | 8.77e-20 | 93.2 |
| MS.gene70045.t1 | MTR_8g445860 | 27.481 | 262 | 123 | 8 | 260 | 491 | 8 | 232 | 5.95e-19 | 86.7 |
| MS.gene70045.t1 | MTR_8g445860 | 30.204 | 245 | 144 | 8 | 1 | 234 | 7 | 235 | 6.13e-17 | 80.9 |
| MS.gene70045.t1 | MTR_7g062270 | 35.938 | 192 | 94 | 10 | 1 | 180 | 1 | 175 | 2.65e-18 | 87.4 |
| MS.gene70045.t1 | MTR_1g115440 | 29.600 | 250 | 146 | 10 | 1 | 234 | 1 | 236 | 1.10e-16 | 80.1 |
| MS.gene70045.t1 | MTR_1g115440 | 27.734 | 256 | 148 | 8 | 250 | 491 | 1 | 233 | 8.85e-14 | 71.6 |
| MS.gene70045.t1 | MTR_7g063850 | 26.877 | 253 | 147 | 8 | 262 | 503 | 63 | 288 | 1.72e-16 | 80.5 |
| MS.gene70045.t1 | MTR_0150s0010 | 28.571 | 252 | 145 | 6 | 1 | 234 | 1 | 235 | 2.87e-14 | 72.8 |
| MS.gene70045.t1 | MTR_0150s0010 | 26.996 | 263 | 124 | 9 | 261 | 491 | 6 | 232 | 4.42e-14 | 72.4 |
| MS.gene70045.t1 | MTR_7g100420 | 29.932 | 294 | 158 | 8 | 214 | 493 | 134 | 393 | 3.18e-14 | 75.1 |
| MS.gene70045.t1 | MTR_7g100420 | 67.442 | 43 | 14 | 0 | 9 | 51 | 39 | 81 | 4.69e-11 | 65.1 |
| MS.gene70045.t1 | MTR_6g006800 | 73.913 | 46 | 10 | 1 | 1 | 44 | 1 | 46 | 8.50e-14 | 66.6 |
| MS.gene70045.t1 | MTR_1g115455 | 39.000 | 100 | 49 | 2 | 1 | 100 | 1 | 88 | 1.08e-13 | 71.2 |
| MS.gene70045.t1 | MTR_1g115455 | 28.862 | 246 | 137 | 9 | 261 | 491 | 5 | 227 | 2.00e-12 | 67.4 |
| MS.gene70045.t1 | MTR_1g115450 | 41.667 | 84 | 41 | 1 | 260 | 335 | 2 | 85 | 2.13e-13 | 67.8 |
| MS.gene70045.t1 | MTR_1g115450 | 32.895 | 152 | 72 | 6 | 1 | 136 | 1 | 138 | 5.43e-12 | 63.9 |
| MS.gene70045.t1 | MTR_8g445920 | 43.939 | 66 | 37 | 0 | 261 | 326 | 6 | 71 | 2.20e-12 | 63.9 |
| MS.gene70045.t1 | MTR_8g044890 | 43.939 | 66 | 37 | 0 | 261 | 326 | 6 | 71 | 2.20e-12 | 63.9 |
| MS.gene70045.t1 | MTR_0150s0030 | 34.000 | 100 | 55 | 1 | 3 | 102 | 2 | 90 | 3.15e-12 | 66.2 |
| MS.gene70045.t1 | MTR_0150s0030 | 38.372 | 86 | 44 | 1 | 261 | 337 | 4 | 89 | 5.62e-12 | 65.5 |
| MS.gene70045.t1 | MTR_1g115435 | 27.083 | 240 | 144 | 7 | 1 | 239 | 1 | 210 | 4.68e-12 | 66.2 |
| MS.gene70045.t1 | MTR_8g044880 | 37.000 | 100 | 52 | 2 | 3 | 102 | 2 | 90 | 9.41e-12 | 66.2 |
| MS.gene70045.t1 | MTR_8g044880 | 40.000 | 85 | 42 | 1 | 261 | 336 | 4 | 88 | 2.65e-11 | 64.7 |
| MS.gene70045.t1 | MTR_8g445910 | 37.000 | 100 | 52 | 2 | 3 | 102 | 2 | 90 | 1.06e-11 | 65.9 |
| MS.gene70045.t1 | MTR_8g445910 | 40.000 | 85 | 42 | 1 | 261 | 336 | 4 | 88 | 2.37e-11 | 64.7 |
| MS.gene70045.t1 | MTR_1g115470 | 39.535 | 86 | 44 | 1 | 261 | 338 | 2 | 87 | 1.46e-11 | 67.0 |
| MS.gene70045.t1 | MTR_7g063720 | 26.339 | 224 | 136 | 7 | 12 | 233 | 26 | 222 | 5.36e-11 | 63.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene70045.t1 | AT5G01130 | 32.190 | 525 | 260 | 18 | 1 | 503 | 1 | 451 | 6.95e-65 | 218 |
| MS.gene70045.t1 | AT5G01120 | 29.856 | 556 | 310 | 14 | 1 | 524 | 1 | 508 | 2.32e-64 | 218 |
| MS.gene70045.t1 | AT5G01150 | 32.015 | 531 | 295 | 16 | 1 | 507 | 1 | 489 | 1.07e-61 | 211 |
| MS.gene70045.t1 | AT3G09140 | 30.697 | 531 | 312 | 18 | 1 | 505 | 1 | 501 | 4.77e-57 | 198 |
| MS.gene70045.t1 | AT5G43240 | 32.188 | 553 | 305 | 18 | 1 | 524 | 1 | 512 | 8.35e-57 | 198 |
| MS.gene70045.t1 | AT5G43240 | 32.188 | 553 | 305 | 18 | 1 | 524 | 1 | 512 | 8.35e-57 | 198 |
| MS.gene70045.t1 | AT5G43240 | 32.188 | 553 | 305 | 18 | 1 | 524 | 1 | 512 | 8.35e-57 | 198 |
| MS.gene70045.t1 | AT5G01140 | 31.332 | 533 | 297 | 18 | 1 | 524 | 1 | 473 | 1.36e-54 | 191 |
| MS.gene70045.t1 | AT3G09140 | 29.159 | 559 | 312 | 19 | 1 | 505 | 1 | 529 | 5.76e-51 | 182 |
| MS.gene70045.t1 | AT3G09110 | 33.531 | 337 | 194 | 10 | 1 | 326 | 1 | 318 | 3.75e-47 | 167 |
| MS.gene70045.t1 | AT3G09120 | 35.952 | 331 | 175 | 12 | 6 | 319 | 3 | 313 | 4.72e-47 | 166 |
| MS.gene70045.t1 | AT5G37320 | 29.804 | 510 | 284 | 19 | 16 | 498 | 18 | 480 | 4.78e-46 | 168 |
| MS.gene70045.t1 | AT5G43240 | 29.870 | 385 | 221 | 10 | 156 | 524 | 17 | 368 | 7.90e-27 | 112 |
Find 113 sgRNAs with CRISPR-Local
Find 189 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CACAGGAACAATGAAGATTT+TGG | 0.106889 | 4.2:+84665727 | None:intergenic |
| GCCTTTGACAAATACAATTT+TGG | 0.171177 | 4.2:-84664412 | MS.gene70045:CDS |
| TACAGTTGATACAAACATTT+TGG | 0.193172 | 4.2:+84663877 | None:intergenic |
| AGGTGGGTTGTCTTTGTTAT+TGG | 0.209021 | 4.2:+84664374 | None:intergenic |
| AGAAAATGGATCATTGTTTC+TGG | 0.236079 | 4.2:-84665625 | MS.gene70045:CDS |
| AGGATCCGTTGTAAAGCTTT+TGG | 0.238767 | 4.2:-84664193 | MS.gene70045:CDS |
| CTCTTACAAAGACCCCATTT+TGG | 0.250177 | 4.2:+84665646 | None:intergenic |
| TAATAAACAGCCTAAGAATT+TGG | 0.255600 | 4.2:-84665694 | MS.gene70045:CDS |
| CAGAAGTAAAATGGATATTA+AGG | 0.256678 | 4.2:-84664307 | MS.gene70045:CDS |
| CAAGGGAATAATGCCCAAAA+TGG | 0.256693 | 4.2:-84665660 | MS.gene70045:CDS |
| CCCCAGTAACAGAAGTAAAA+TGG | 0.271085 | 4.2:-84664316 | MS.gene70045:CDS |
| AAAAGAGTTGATTCTTGTTT+AGG | 0.285484 | 4.2:+84663519 | None:intergenic |
| GTTGTCTTTGTTATTGGATT+TGG | 0.286232 | 4.2:+84664380 | None:intergenic |
| GTGATGCTTCAGGAATGTTT+AGG | 0.289504 | 4.2:+84664052 | None:intergenic |
| AATGGATCAGAAGATGTTAT+TGG | 0.296431 | 4.2:-84663841 | MS.gene70045:CDS |
| CCATCAGAGTCCAAATTCTT+AGG | 0.296726 | 4.2:+84665684 | None:intergenic |
| GTGAAGAGAGCAACATTATA+TGG | 0.311807 | 4.2:-84663814 | MS.gene70045:CDS |
| TCTGATCCATTGACAGATCT+TGG | 0.321394 | 4.2:+84663853 | None:intergenic |
| ACCTTAACTCAGACGATGTT+TGG | 0.325303 | 4.2:-84665884 | MS.gene70045:CDS |
| CAATTCTTCACAGGGATTCC+TGG | 0.330678 | 4.2:+84665827 | None:intergenic |
| GGGGTCTTTGTAAGAGAAAA+TGG | 0.335839 | 4.2:-84665639 | MS.gene70045:CDS |
| TGATGCTTCAGGAATGTTTA+GGG | 0.348695 | 4.2:+84664053 | None:intergenic |
| CGCTAACTGCTGATGCGAAT+TGG | 0.357706 | 4.2:+84664349 | None:intergenic |
| GGAATGTTTAGGGGCTGGTT+TGG | 0.374205 | 4.2:+84664063 | None:intergenic |
| GTGTAGGCTTTGAGCTTCCT+TGG | 0.380217 | 4.2:-84663600 | MS.gene70045:intron |
| GAAGTCAACAAAATCTTCAT+TGG | 0.384187 | 4.2:+84664242 | None:intergenic |
| AACAACAGAATTAAAGATAG+AGG | 0.385589 | 4.2:-84663938 | MS.gene70045:CDS |
| GTGTGTGATGGTGATGCTTC+AGG | 0.396428 | 4.2:+84664042 | None:intergenic |
| TTTACTTCTGTTACTGGGGC+AGG | 0.399928 | 4.2:+84664320 | None:intergenic |
| TCCAAACATCGTCTGAGTTA+AGG | 0.401587 | 4.2:+84665883 | None:intergenic |
| AGCTTCCTTACCATGCCATT+AGG | 0.401925 | 4.2:-84664213 | MS.gene70045:CDS |
| ATGCAGATGTTGATTGAATC+CGG | 0.403317 | 4.2:-84665558 | MS.gene70045:CDS |
| TCACACACTACATATTACTA+TGG | 0.403604 | 4.2:-84664027 | MS.gene70045:CDS |
| AAGGGAATAATGCCCAAAAT+GGG | 0.410995 | 4.2:-84665659 | MS.gene70045:CDS |
| GTTTGTCCACTAATACTTTG+AGG | 0.420214 | 4.2:+84666090 | None:intergenic |
| TCCTCTAGTTGAGTCAAGTC+TGG | 0.422333 | 4.2:+84665531 | None:intergenic |
| GGATTAAGTAATACAGAAGT+AGG | 0.422673 | 4.2:+84664111 | None:intergenic |
| ATTCTTAGGCTGTTTATTAG+TGG | 0.429316 | 4.2:+84665698 | None:intergenic |
| CAAAGGCTCATGAGAGGTTA+AGG | 0.430177 | 4.2:+84664428 | None:intergenic |
| TTCTTAGGCTGTTTATTAGT+GGG | 0.434937 | 4.2:+84665699 | None:intergenic |
| AGCAAAGAATTAGAAGAAAG+TGG | 0.435467 | 4.2:+84663766 | None:intergenic |
| TTGTTTCTCATTGCTGTTGG+TGG | 0.438700 | 4.2:+84665968 | None:intergenic |
| AACAAATGCTGCTGCATCCC+AGG | 0.442581 | 4.2:-84665845 | MS.gene70045:CDS |
| GATTCCCCTCAAAGTATTAG+TGG | 0.443614 | 4.2:-84666096 | MS.gene70045:CDS |
| ACTACATATTACTATGGTAC+AGG | 0.445699 | 4.2:-84664021 | MS.gene70045:CDS |
| CTGATCCATTGACAGATCTT+GGG | 0.447121 | 4.2:+84663854 | None:intergenic |
| CCTAGTGTAGCATACCAGTT+TGG | 0.449202 | 4.2:-84664090 | MS.gene70045:CDS |
| CTTCAGGAATGTTTAGGGGC+TGG | 0.451004 | 4.2:+84664058 | None:intergenic |
| TTTGGTGTCCACTGTATGAC+TGG | 0.453330 | 4.2:+84663994 | None:intergenic |
| CAAAATCTTCATTGTTCCTG+TGG | 0.454041 | 4.2:-84665726 | MS.gene70045:CDS |
| GCCAAAATTGTATTTGTCAA+AGG | 0.454824 | 4.2:+84664411 | None:intergenic |
| CTTGTTTAGGCACACTCAAA+AGG | 0.455083 | 4.2:+84663532 | None:intergenic |
| ACTGCTGATGCGAATTGGTT+AGG | 0.462415 | 4.2:+84664354 | None:intergenic |
| TGACTCTTGTTGAGAGGCCA+TGG | 0.466458 | 4.2:+84666124 | None:intergenic |
| TGGTGCCGAGTGGAAGAGAT+AGG | 0.477898 | 4.2:+84666006 | None:intergenic |
| AGCTTTACAACGGATCCTAA+TGG | 0.479722 | 4.2:+84664198 | None:intergenic |
| TCTGAGTCATCACCGTTCCT+TGG | 0.483446 | 4.2:-84665939 | MS.gene70045:CDS |
| GCTGGTTTGGACAACCAAAC+TGG | 0.486454 | 4.2:+84664076 | None:intergenic |
| AATTCTTCACAGGGATTCCT+GGG | 0.487424 | 4.2:+84665828 | None:intergenic |
| TTTGTCCACTAATACTTTGA+GGG | 0.488139 | 4.2:+84666091 | None:intergenic |
| GTACAAAAGTGTGGAGAAGT+TGG | 0.495251 | 4.2:-84664136 | MS.gene70045:CDS |
| CTTCATGCACAATTCTTCAC+AGG | 0.496875 | 4.2:+84665818 | None:intergenic |
| AGGAGTGATTTCTAAGTCAC+GGG | 0.505545 | 4.2:-84663914 | MS.gene70045:CDS |
| TTGTTGTTTCTCATTGCTGT+TGG | 0.506477 | 4.2:+84665965 | None:intergenic |
| CGTTTCTGACTCTTGTTGAG+AGG | 0.519387 | 4.2:+84666118 | None:intergenic |
| TTACTTCTGTTACTGGGGCA+GGG | 0.533411 | 4.2:+84664321 | None:intergenic |
| AGAGGTGTTTGATGTTTCCA+AGG | 0.539221 | 4.2:+84665922 | None:intergenic |
| CCAAACTGGTATGCTACACT+AGG | 0.541847 | 4.2:+84664090 | None:intergenic |
| ACACATCCAGCAAAAGAGTT+CGG | 0.547905 | 4.2:+84664168 | None:intergenic |
| CTTCAAGATCATCAAGAGGA+AGG | 0.549012 | 4.2:+84663722 | None:intergenic |
| ATTTGGACTCTGATGGTCAA+GGG | 0.559948 | 4.2:-84665677 | MS.gene70045:CDS |
| TGTTTGATGTTTCCAAGGAA+CGG | 0.566498 | 4.2:+84665927 | None:intergenic |
| TGCAGATGTTGATTGAATCC+GGG | 0.567832 | 4.2:-84665557 | MS.gene70045:CDS |
| TGGTAATTTGTACAAAAGTG+TGG | 0.569416 | 4.2:-84664145 | MS.gene70045:CDS |
| CTGTACCCAAGATCTGTCAA+TGG | 0.569746 | 4.2:-84663859 | MS.gene70045:CDS |
| TTGAGTCAAGTCTGGATACC+CGG | 0.574651 | 4.2:+84665539 | None:intergenic |
| ACAACAGAATTAAAGATAGA+GGG | 0.578556 | 4.2:-84663937 | MS.gene70045:CDS |
| CCTAAGAATTTGGACTCTGA+TGG | 0.584071 | 4.2:-84665684 | MS.gene70045:CDS |
| GTCTTTAAGTCCACTCGTCA+AGG | 0.585990 | 4.2:+84663554 | None:intergenic |
| CGGATCCTAATGGCATGGTA+AGG | 0.586168 | 4.2:+84664208 | None:intergenic |
| TTGTCCACTAATACTTTGAG+GGG | 0.589395 | 4.2:+84666092 | None:intergenic |
| GAGGAGTGATTTCTAAGTCA+CGG | 0.590457 | 4.2:-84663915 | MS.gene70045:CDS |
| ACACAACATTGGCAAGAATG+AGG | 0.596978 | 4.2:-84665502 | MS.gene70045:intron |
| TTCATGCACAATTCTTCACA+GGG | 0.599633 | 4.2:+84665819 | None:intergenic |
| CTGATGCGAATTGGTTAGGT+GGG | 0.604009 | 4.2:+84664358 | None:intergenic |
| AGTTTCCTATCTCTTCCACT+CGG | 0.604615 | 4.2:-84666011 | MS.gene70045:CDS |
| TCAAGATTTACCTTGACGAG+TGG | 0.605006 | 4.2:-84663564 | MS.gene70045:CDS |
| GATTAAGTAATACAGAAGTA+GGG | 0.608737 | 4.2:+84664112 | None:intergenic |
| CTACATATTACTATGGTACA+GGG | 0.613447 | 4.2:-84664020 | MS.gene70045:CDS |
| AGGTTAAGGCATACTTGAGG+AGG | 0.618815 | 4.2:+84664442 | None:intergenic |
| GAGGAAGTCACACACAACAT+TGG | 0.621785 | 4.2:-84665513 | MS.gene70045:CDS |
| TTCACTTCAAGATCATCAAG+AGG | 0.622399 | 4.2:+84663718 | None:intergenic |
| GATGCTTCAGGAATGTTTAG+GGG | 0.623300 | 4.2:+84664054 | None:intergenic |
| CATCTGCATGGAGGACAGCA+AGG | 0.623674 | 4.2:+84665572 | None:intergenic |
| GGATTCAATCAACATCTGCA+TGG | 0.626744 | 4.2:+84665560 | None:intergenic |
| AGAGCAACATTATATGGCAT+AGG | 0.634047 | 4.2:-84663808 | MS.gene70045:CDS |
| GATAAGCATTGGTGAAGCTG+AGG | 0.635941 | 4.2:-84663692 | MS.gene70045:intron |
| GCTGATGCGAATTGGTTAGG+TGG | 0.641255 | 4.2:+84664357 | None:intergenic |
| TCCAGACTTGACTCAACTAG+AGG | 0.641739 | 4.2:-84665532 | MS.gene70045:CDS |
| AATTTGGACTCTGATGGTCA+AGG | 0.642808 | 4.2:-84665678 | MS.gene70045:CDS |
| ATTTGTCAAAGGCTCATGAG+AGG | 0.647356 | 4.2:+84664422 | None:intergenic |
| TACAACGGATCCTAATGGCA+TGG | 0.650564 | 4.2:+84664203 | None:intergenic |
| CGGTCCCAAAAGCTTTACAA+CGG | 0.659646 | 4.2:+84664188 | None:intergenic |
| ACAGAATTAAAGATAGAGGG+AGG | 0.659678 | 4.2:-84663934 | MS.gene70045:CDS |
| AGGGAATAATGCCCAAAATG+GGG | 0.662697 | 4.2:-84665658 | MS.gene70045:CDS |
| GAAGTGAAGCTGATAAGCAT+TGG | 0.664925 | 4.2:-84663703 | MS.gene70045:CDS |
| TAGTAATATGTAGTGTGTGA+TGG | 0.665437 | 4.2:+84664030 | None:intergenic |
| AGACGAACGATGGTGCCGAG+TGG | 0.667787 | 4.2:+84665996 | None:intergenic |
| GAGAGGTTAAGGCATACTTG+AGG | 0.684746 | 4.2:+84664439 | None:intergenic |
| CAGGGACACCAGTCATACAG+TGG | 0.687451 | 4.2:-84664002 | MS.gene70045:CDS |
| TTCAATCAACATCTGCATGG+AGG | 0.700385 | 4.2:+84665563 | None:intergenic |
| GGAGTGATTTCTAAGTCACG+GGG | 0.768129 | 4.2:-84663913 | MS.gene70045:CDS |
| GGTGGCTAAAAGACGAACGA+TGG | 0.774962 | 4.2:+84665986 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TGATAATAAAAAGAAAAAAT+GGG | + | chr4.2:84664136-84664155 | None:intergenic | 10.0% |
| !!! | ATTTTTTCTTTTTATTATCA+AGG | - | chr4.2:84664136-84664155 | MS.gene70045:CDS | 10.0% |
| !!! | TTGATAATAAAAAGAAAAAA+TGG | + | chr4.2:84664137-84664156 | None:intergenic | 10.0% |
| !! | ACATAAAAGCAAAAATAAAA+AGG | + | chr4.2:84664869-84664888 | None:intergenic | 15.0% |
| !!! | ATTTTCAATTTTTTTTTCCT+AGG | - | chr4.2:84665056-84665075 | MS.gene70045:intron | 15.0% |
| !!! | ATTTTTGCTTTTATGTTTTT+TGG | - | chr4.2:84664873-84664892 | MS.gene70045:intron | 15.0% |
| !!! | TTATACAAATACTGTTTTTT+TGG | + | chr4.2:84665598-84665617 | None:intergenic | 15.0% |
| !! | AATGAAATTGCAGAAAAAAA+AGG | + | chr4.2:84665030-84665049 | None:intergenic | 20.0% |
| !! | ACAAAATGTTAAAACACAAA+AGG | + | chr4.2:84665097-84665116 | None:intergenic | 20.0% |
| !! | GAAATTAAAAACTTCTGTAA+AGG | - | chr4.2:84664949-84664968 | MS.gene70045:intron | 20.0% |
| !! | TCGTAAAAAATCTATGTAAT+GGG | + | chr4.2:84664711-84664730 | None:intergenic | 20.0% |
| !! | TTGAATGAAAGAATGAAAAT+AGG | + | chr4.2:84664997-84665016 | None:intergenic | 20.0% |
| !!! | AAATATGAGACATTTAAGTT+AGG | + | chr4.2:84664180-84664199 | None:intergenic | 20.0% |
| !!! | AATCTAAACAATCTTTTTGT+AGG | - | chr4.2:84664319-84664338 | MS.gene70045:CDS | 20.0% |
| !!! | AGATTAAGAAACATGATTTT+CGG | - | chr4.2:84664254-84664273 | MS.gene70045:CDS | 20.0% |
| !!! | TAGATAATATTTTTCCATGT+AGG | + | chr4.2:84664415-84664434 | None:intergenic | 20.0% |
| !!! | TATTGATTTATTTACCTACA+TGG | - | chr4.2:84664398-84664417 | MS.gene70045:CDS | 20.0% |
| ! | AAAAATGTGATTCGATTGTT+GGG | - | chr4.2:84664203-84664222 | MS.gene70045:CDS | 25.0% |
| ! | AACAACAGAATTAAAGATAG+AGG | - | chr4.2:84665633-84665652 | MS.gene70045:CDS | 25.0% |
| ! | ACAACAGAATTAAAGATAGA+GGG | - | chr4.2:84665634-84665653 | MS.gene70045:CDS | 25.0% |
| ! | ATTCACTTTAATTGTTGTGT+AGG | - | chr4.2:84665955-84665974 | MS.gene70045:CDS | 25.0% |
| ! | CAGAAGTAAAATGGATATTA+AGG | - | chr4.2:84665264-84665283 | MS.gene70045:intron | 25.0% |
| ! | CGTAAAAAATCTATGTAATG+GGG | + | chr4.2:84664710-84664729 | None:intergenic | 25.0% |
| ! | CTCGTAAAAAATCTATGTAA+TGG | + | chr4.2:84664712-84664731 | None:intergenic | 25.0% |
| ! | GATTAAGTAATACAGAAGTA+GGG | + | chr4.2:84665462-84665481 | None:intergenic | 25.0% |
| ! | GTAAAAAATCTATGTAATGG+GGG | + | chr4.2:84664709-84664728 | None:intergenic | 25.0% |
| ! | TAATAAACAGCCTAAGAATT+TGG | - | chr4.2:84663877-84663896 | MS.gene70045:CDS | 25.0% |
| ! | TTCTGTAAAGGTGAAATATT+TGG | - | chr4.2:84664961-84664980 | MS.gene70045:intron | 25.0% |
| !! | AAAAGAGTTGATTCTTGTTT+AGG | + | chr4.2:84666055-84666074 | None:intergenic | 25.0% |
| !! | ACTTTCAAAAAAGTTGATTC+TGG | + | chr4.2:84666091-84666110 | None:intergenic | 25.0% |
| !!! | AAAAAAGTTGATTCTGGTTT+AGG | + | chr4.2:84666085-84666104 | None:intergenic | 25.0% |
| !!! | AGCTAGTTTTATAGCAATTA+TGG | + | chr4.2:84664662-84664681 | None:intergenic | 25.0% |
| !!! | TACAGTTGATACAAACATTT+TGG | + | chr4.2:84665697-84665716 | None:intergenic | 25.0% |
| !!! | TTTTTGTTATTATAGCCTCT+TGG | - | chr4.2:84665932-84665951 | MS.gene70045:CDS | 25.0% |
| AATGGATCAGAAGATGTTAT+TGG | - | chr4.2:84665730-84665749 | MS.gene70045:CDS | 30.0% | |
| ACAATTAAAGTGAATCCAAG+AGG | + | chr4.2:84665950-84665969 | None:intergenic | 30.0% | |
| ACTACATATTACTATGGTAC+AGG | - | chr4.2:84665550-84665569 | MS.gene70045:CDS | 30.0% | |
| AGAAAATGGATCATTGTTTC+TGG | - | chr4.2:84663946-84663965 | MS.gene70045:CDS | 30.0% | |
| AGCAAAGAATTAGAAGAAAG+TGG | + | chr4.2:84665808-84665827 | None:intergenic | 30.0% | |
| ATAAAATGCAGACAAATGCT+AGG | - | chr4.2:84664757-84664776 | MS.gene70045:intron | 30.0% | |
| ATGTTAATGTTCCAAGTGAA+AGG | - | chr4.2:84664805-84664824 | MS.gene70045:intron | 30.0% | |
| ATTCTTAGGCTGTTTATTAG+TGG | + | chr4.2:84663876-84663895 | None:intergenic | 30.0% | |
| CAAAAATGTGATTCGATTGT+TGG | - | chr4.2:84664202-84664221 | MS.gene70045:CDS | 30.0% | |
| CACACAAAAACTTTACTTGT+TGG | + | chr4.2:84663797-84663816 | None:intergenic | 30.0% | |
| CTACATATTACTATGGTACA+GGG | - | chr4.2:84665551-84665570 | MS.gene70045:CDS | 30.0% | |
| GAAGTCAACAAAATCTTCAT+TGG | + | chr4.2:84665332-84665351 | None:intergenic | 30.0% | |
| GCCAAAATTGTATTTGTCAA+AGG | + | chr4.2:84665163-84665182 | None:intergenic | 30.0% | |
| GCTAGTAAAATATGTATGCA+TGG | + | chr4.2:84664921-84664940 | None:intergenic | 30.0% | |
| GGATTAAGTAATACAGAAGT+AGG | + | chr4.2:84665463-84665482 | None:intergenic | 30.0% | |
| TAGTAATATGTAGTGTGTGA+TGG | + | chr4.2:84665544-84665563 | None:intergenic | 30.0% | |
| TCACACACTACATATTACTA+TGG | - | chr4.2:84665544-84665563 | MS.gene70045:CDS | 30.0% | |
| TTAATCTCATCGATCTCATA+AGG | + | chr4.2:84664241-84664260 | None:intergenic | 30.0% | |
| TTCTTAGGCTGTTTATTAGT+GGG | + | chr4.2:84663875-84663894 | None:intergenic | 30.0% | |
| TTTGTCCACTAATACTTTGA+GGG | + | chr4.2:84663483-84663502 | None:intergenic | 30.0% | |
| ! | ACATTTAAGTTAGGCAAGTA+AGG | + | chr4.2:84664171-84664190 | None:intergenic | 30.0% |
| ! | AGAAACATGATTTTCGGTAT+AGG | - | chr4.2:84664260-84664279 | MS.gene70045:CDS | 30.0% |
| ! | ATCCATTTTACTTCTGTTAC+TGG | + | chr4.2:84665260-84665279 | None:intergenic | 30.0% |
| ! | GCCTTTGACAAATACAATTT+TGG | - | chr4.2:84665159-84665178 | MS.gene70045:intron | 30.0% |
| ! | TAGCATTTGTCTGCATTTTA+TGG | + | chr4.2:84664758-84664777 | None:intergenic | 30.0% |
| ! | TCCATTTTACTTCTGTTACT+GGG | + | chr4.2:84665259-84665278 | None:intergenic | 30.0% |
| ! | TCTAGTCGATTTAATAGATC+AGG | - | chr4.2:84664431-84664450 | MS.gene70045:CDS | 30.0% |
| ! | TGGTAATTTGTACAAAAGTG+TGG | - | chr4.2:84665426-84665445 | MS.gene70045:intron | 30.0% |
| !! | GTTGTCTTTGTTATTGGATT+TGG | + | chr4.2:84665194-84665213 | None:intergenic | 30.0% |
| !!! | GGTTAATCGTTGTTGTTTTA+AGG | + | chr4.2:84664641-84664660 | None:intergenic | 30.0% |
| !!! | GTCAATGTTGATTCTGTTTT+AGG | + | chr4.2:84666115-84666134 | None:intergenic | 30.0% |
| AAATTGGTGGAAAACATGGA+TGG | - | chr4.2:84664503-84664522 | MS.gene70045:intron | 35.0% | |
| AAGGGAATAATGCCCAAAAT+GGG | - | chr4.2:84663912-84663931 | MS.gene70045:CDS | 35.0% | |
| ACAGAATTAAAGATAGAGGG+AGG | - | chr4.2:84665637-84665656 | MS.gene70045:CDS | 35.0% | |
| ACGTAAATTGGTGGAAAACA+TGG | - | chr4.2:84664499-84664518 | MS.gene70045:intron | 35.0% | |
| AGAGCAACATTATATGGCAT+AGG | - | chr4.2:84665763-84665782 | MS.gene70045:CDS | 35.0% | |
| AGCATGATATTTGCAGAGAA+CGG | + | chr4.2:84664837-84664856 | None:intergenic | 35.0% | |
| CAAAATCTTCATTGTTCCTG+TGG | - | chr4.2:84663845-84663864 | MS.gene70045:CDS | 35.0% | |
| GGTAAGAAAAACATGAACCT+AGG | + | chr4.2:84665076-84665095 | None:intergenic | 35.0% | |
| GTATAGGAATAGACAAACCA+TGG | - | chr4.2:84664276-84664295 | MS.gene70045:CDS | 35.0% | |
| GTGAAGAGAGCAACATTATA+TGG | - | chr4.2:84665757-84665776 | MS.gene70045:CDS | 35.0% | |
| GTTTGTCCACTAATACTTTG+AGG | + | chr4.2:84663484-84663503 | None:intergenic | 35.0% | |
| TGATGCTTCAGGAATGTTTA+GGG | + | chr4.2:84665521-84665540 | None:intergenic | 35.0% | |
| TGTTTGATGTTTCCAAGGAA+CGG | + | chr4.2:84663647-84663666 | None:intergenic | 35.0% | |
| TTCACTTCAAGATCATCAAG+AGG | + | chr4.2:84665856-84665875 | None:intergenic | 35.0% | |
| TTCATGCACAATTCTTCACA+GGG | + | chr4.2:84663755-84663774 | None:intergenic | 35.0% | |
| TTGATGTCAAAAATGCTCCA+AGG | + | chr4.2:84665991-84666010 | None:intergenic | 35.0% | |
| TTGTCCACTAATACTTTGAG+GGG | + | chr4.2:84663482-84663501 | None:intergenic | 35.0% | |
| ! | ACTAGCTCTCTTTCAATCTT+AGG | - | chr4.2:84664675-84664694 | MS.gene70045:intron | 35.0% |
| ! | ATGCAGATGTTGATTGAATC+CGG | - | chr4.2:84664013-84664032 | MS.gene70045:CDS | 35.0% |
| ! | CACAGGAACAATGAAGATTT+TGG | + | chr4.2:84663847-84663866 | None:intergenic | 35.0% |
| ! | CCATTTTACTTCTGTTACTG+GGG | + | chr4.2:84665258-84665277 | None:intergenic | 35.0% |
| ! | TCTTACAAAGACCCCATTTT+GGG | + | chr4.2:84663927-84663946 | None:intergenic | 35.0% |
| !! | TTGTTGTTTCTCATTGCTGT+TGG | + | chr4.2:84663609-84663628 | None:intergenic | 35.0% |
| !!! | AGTTAAGGTTTTGAACGGTT+TGG | + | chr4.2:84663676-84663695 | None:intergenic | 35.0% |
| !!! | GTCTGAGTTAAGGTTTTGAA+CGG | + | chr4.2:84663681-84663700 | None:intergenic | 35.0% |
| !!! | TTTATTAGTGGGTTTTCCAC+AGG | + | chr4.2:84663864-84663883 | None:intergenic | 35.0% |
| AACGGATCTATCCTTTCACT+TGG | + | chr4.2:84664819-84664838 | None:intergenic | 40.0% | |
| AATCAATTTGATCCCCCGAT+TGG | + | chr4.2:84664358-84664377 | None:intergenic | 40.0% | |
| AATTCTTCACAGGGATTCCT+GGG | + | chr4.2:84663746-84663765 | None:intergenic | 40.0% | |
| AATTTGGACTCTGATGGTCA+AGG | - | chr4.2:84663893-84663912 | MS.gene70045:CDS | 40.0% | |
| ACACAACATTGGCAAGAATG+AGG | - | chr4.2:84664069-84664088 | MS.gene70045:CDS | 40.0% | |
| ACACATCCAGCAAAAGAGTT+CGG | + | chr4.2:84665406-84665425 | None:intergenic | 40.0% | |
| ACCTTAACTCAGACGATGTT+TGG | - | chr4.2:84663687-84663706 | MS.gene70045:intron | 40.0% | |
| AGCTTTACAACGGATCCTAA+TGG | + | chr4.2:84665376-84665395 | None:intergenic | 40.0% | |
| AGGAGTGATTTCTAAGTCAC+GGG | - | chr4.2:84665657-84665676 | MS.gene70045:CDS | 40.0% | |
| AGGGAATAATGCCCAAAATG+GGG | - | chr4.2:84663913-84663932 | MS.gene70045:CDS | 40.0% | |
| AGTTTCCTATCTCTTCCACT+CGG | - | chr4.2:84663560-84663579 | MS.gene70045:CDS | 40.0% | |
| ATTTGGACTCTGATGGTCAA+GGG | - | chr4.2:84663894-84663913 | MS.gene70045:CDS | 40.0% | |
| ATTTGTCAAAGGCTCATGAG+AGG | + | chr4.2:84665152-84665171 | None:intergenic | 40.0% | |
| CAAGGGAATAATGCCCAAAA+TGG | - | chr4.2:84663911-84663930 | MS.gene70045:CDS | 40.0% | |
| CCATCAGAGTCCAAATTCTT+AGG | + | chr4.2:84663890-84663909 | None:intergenic | 40.0% | |
| CCCCAGTAACAGAAGTAAAA+TGG | - | chr4.2:84665255-84665274 | MS.gene70045:intron | 40.0% | |
| CCTAAGAATTTGGACTCTGA+TGG | - | chr4.2:84663887-84663906 | MS.gene70045:CDS | 40.0% | |
| CTGATCCATTGACAGATCTT+GGG | + | chr4.2:84665720-84665739 | None:intergenic | 40.0% | |
| CTTCAAGATCATCAAGAGGA+AGG | + | chr4.2:84665852-84665871 | None:intergenic | 40.0% | |
| CTTCATGCACAATTCTTCAC+AGG | + | chr4.2:84663756-84663775 | None:intergenic | 40.0% | |
| CTTGTTTAGGCACACTCAAA+AGG | + | chr4.2:84666042-84666061 | None:intergenic | 40.0% | |
| GAAGTGAAGCTGATAAGCAT+TGG | - | chr4.2:84665868-84665887 | MS.gene70045:CDS | 40.0% | |
| GAGGAGTGATTTCTAAGTCA+CGG | - | chr4.2:84665656-84665675 | MS.gene70045:CDS | 40.0% | |
| GATGCTTCAGGAATGTTTAG+GGG | + | chr4.2:84665520-84665539 | None:intergenic | 40.0% | |
| GGATTCAATCAACATCTGCA+TGG | + | chr4.2:84664014-84664033 | None:intergenic | 40.0% | |
| GGGGTCTTTGTAAGAGAAAA+TGG | - | chr4.2:84663932-84663951 | MS.gene70045:CDS | 40.0% | |
| GTGATGCTTCAGGAATGTTT+AGG | + | chr4.2:84665522-84665541 | None:intergenic | 40.0% | |
| GTGATTCGATTGTTGGGATT+TGG | - | chr4.2:84664209-84664228 | MS.gene70045:CDS | 40.0% | |
| TCAAGATTTACCTTGACGAG+TGG | - | chr4.2:84666007-84666026 | MS.gene70045:CDS | 40.0% | |
| TCCAAACATCGTCTGAGTTA+AGG | + | chr4.2:84663691-84663710 | None:intergenic | 40.0% | |
| TCTCTGCAAATATCATGCTG+CGG | - | chr4.2:84664838-84664857 | MS.gene70045:intron | 40.0% | |
| TCTGATCCATTGACAGATCT+TGG | + | chr4.2:84665721-84665740 | None:intergenic | 40.0% | |
| TGCAGACAAATGCTAGGATT+TGG | - | chr4.2:84664763-84664782 | MS.gene70045:intron | 40.0% | |
| TTCAATCAACATCTGCATGG+AGG | + | chr4.2:84664011-84664030 | None:intergenic | 40.0% | |
| ! | AACTCTTTTGCTGGATGTGT+TGG | - | chr4.2:84665406-84665425 | MS.gene70045:intron | 40.0% |
| ! | AGGATCCGTTGTAAAGCTTT+TGG | - | chr4.2:84665378-84665397 | MS.gene70045:intron | 40.0% |
| ! | CTCTTACAAAGACCCCATTT+TGG | + | chr4.2:84663928-84663947 | None:intergenic | 40.0% |
| ! | GATTCCCCTCAAAGTATTAG+TGG | - | chr4.2:84663475-84663494 | MS.gene70045:CDS | 40.0% |
| ! | GGATCCGTTGTAAAGCTTTT+GGG | - | chr4.2:84665379-84665398 | MS.gene70045:intron | 40.0% |
| ! | GTACAAAAGTGTGGAGAAGT+TGG | - | chr4.2:84665435-84665454 | MS.gene70045:intron | 40.0% |
| ! | TCTATGTAATGGGGGCATAA+TGG | + | chr4.2:84664701-84664720 | None:intergenic | 40.0% |
| ! | TGCAGATGTTGATTGAATCC+GGG | - | chr4.2:84664014-84664033 | MS.gene70045:CDS | 40.0% |
| ! | TTGTTTCTCATTGCTGTTGG+TGG | + | chr4.2:84663606-84663625 | None:intergenic | 40.0% |
| !! | AGAGGTGTTTGATGTTTCCA+AGG | + | chr4.2:84663652-84663671 | None:intergenic | 40.0% |
| !! | AGGTGGGTTGTCTTTGTTAT+TGG | + | chr4.2:84665200-84665219 | None:intergenic | 40.0% |
| ACTGCTGATGCGAATTGGTT+AGG | + | chr4.2:84665220-84665239 | None:intergenic | 45.0% | |
| AGCTTCCTTACCATGCCATT+AGG | - | chr4.2:84665358-84665377 | MS.gene70045:intron | 45.0% | |
| AGGTTAAGGCATACTTGAGG+AGG | + | chr4.2:84665132-84665151 | None:intergenic | 45.0% | |
| ATTTGATCCCCCGATTGGAT+CGG | + | chr4.2:84664353-84664372 | None:intergenic | 45.0% | |
| CAAAGGCTCATGAGAGGTTA+AGG | + | chr4.2:84665146-84665165 | None:intergenic | 45.0% | |
| CAATTCTTCACAGGGATTCC+TGG | + | chr4.2:84663747-84663766 | None:intergenic | 45.0% | |
| CCAAACTGGTATGCTACACT+AGG | + | chr4.2:84665484-84665503 | None:intergenic | 45.0% | |
| CCTAGTGTAGCATACCAGTT+TGG | - | chr4.2:84665481-84665500 | MS.gene70045:intron | 45.0% | |
| CGGTCCCAAAAGCTTTACAA+CGG | + | chr4.2:84665386-84665405 | None:intergenic | 45.0% | |
| CGTTTCTGACTCTTGTTGAG+AGG | + | chr4.2:84663456-84663475 | None:intergenic | 45.0% | |
| CTGATGCGAATTGGTTAGGT+GGG | + | chr4.2:84665216-84665235 | None:intergenic | 45.0% | |
| CTGTACCCAAGATCTGTCAA+TGG | - | chr4.2:84665712-84665731 | MS.gene70045:CDS | 45.0% | |
| GAGAGGTTAAGGCATACTTG+AGG | + | chr4.2:84665135-84665154 | None:intergenic | 45.0% | |
| GAGGAAGTCACACACAACAT+TGG | - | chr4.2:84664058-84664077 | MS.gene70045:CDS | 45.0% | |
| GAGTCGCTTAGATTTCTCCA+TGG | + | chr4.2:84664296-84664315 | None:intergenic | 45.0% | |
| GGAGTGATTTCTAAGTCACG+GGG | - | chr4.2:84665658-84665677 | MS.gene70045:CDS | 45.0% | |
| GTCTTTAAGTCCACTCGTCA+AGG | + | chr4.2:84666020-84666039 | None:intergenic | 45.0% | |
| TAACGCTGGACGTAAATTGG+TGG | - | chr4.2:84664490-84664509 | MS.gene70045:intron | 45.0% | |
| TACAACGGATCCTAATGGCA+TGG | + | chr4.2:84665371-84665390 | None:intergenic | 45.0% | |
| TCCAGACTTGACTCAACTAG+AGG | - | chr4.2:84664039-84664058 | MS.gene70045:CDS | 45.0% | |
| TCCTCTAGTTGAGTCAAGTC+TGG | + | chr4.2:84664043-84664062 | None:intergenic | 45.0% | |
| TGCTAACGCTGGACGTAAAT+TGG | - | chr4.2:84664487-84664506 | MS.gene70045:intron | 45.0% | |
| TTACTTCTGTTACTGGGGCA+GGG | + | chr4.2:84665253-84665272 | None:intergenic | 45.0% | |
| TTGAGTCAAGTCTGGATACC+CGG | + | chr4.2:84664035-84664054 | None:intergenic | 45.0% | |
| TTGGTGAAGCTGAGGTAATG+TGG | - | chr4.2:84665887-84665906 | MS.gene70045:CDS | 45.0% | |
| TTTACTTCTGTTACTGGGGC+AGG | + | chr4.2:84665254-84665273 | None:intergenic | 45.0% | |
| ! | TTCACGAAGCACTCACGAAA+TGG | - | chr4.2:84664463-84664482 | MS.gene70045:intron | 45.0% |
| !! | GATAAGCATTGGTGAAGCTG+AGG | - | chr4.2:84665879-84665898 | MS.gene70045:CDS | 45.0% |
| !! | TTTGGTGTCCACTGTATGAC+TGG | + | chr4.2:84665580-84665599 | None:intergenic | 45.0% |
| !!! | GGTTTTGAACGGTTTGGTAG+AGG | + | chr4.2:84663670-84663689 | None:intergenic | 45.0% |
| AACAAATGCTGCTGCATCCC+AGG | - | chr4.2:84663726-84663745 | MS.gene70045:CDS | 50.0% | |
| AGTTTGTCCCGATCCAATCG+GGG | - | chr4.2:84664342-84664361 | MS.gene70045:CDS | 50.0% | |
| CACGAAATGGTTGCTAACGC+TGG | - | chr4.2:84664476-84664495 | MS.gene70045:intron | 50.0% | |
| CGCTAACTGCTGATGCGAAT+TGG | + | chr4.2:84665225-84665244 | None:intergenic | 50.0% | |
| CGGATCCTAATGGCATGGTA+AGG | + | chr4.2:84665366-84665385 | None:intergenic | 50.0% | |
| CTGCAAATATCATGCTGCGG+TGG | - | chr4.2:84664841-84664860 | MS.gene70045:intron | 50.0% | |
| CTTCAGGAATGTTTAGGGGC+TGG | + | chr4.2:84665516-84665535 | None:intergenic | 50.0% | |
| GAGTTTGTCCCGATCCAATC+GGG | - | chr4.2:84664341-84664360 | MS.gene70045:CDS | 50.0% | |
| GCTGATGCGAATTGGTTAGG+TGG | + | chr4.2:84665217-84665236 | None:intergenic | 50.0% | |
| GGAGTTTGTCCCGATCCAAT+CGG | - | chr4.2:84664340-84664359 | MS.gene70045:CDS | 50.0% | |
| GGTGGCTAAAAGACGAACGA+TGG | + | chr4.2:84663588-84663607 | None:intergenic | 50.0% | |
| TCTGAGTCATCACCGTTCCT+TGG | - | chr4.2:84663632-84663651 | MS.gene70045:intron | 50.0% | |
| TTTGATCCCCCGATTGGATC+GGG | + | chr4.2:84664352-84664371 | None:intergenic | 50.0% | |
| ! | GTGTGTGATGGTGATGCTTC+AGG | + | chr4.2:84665532-84665551 | None:intergenic | 50.0% |
| ! | TTGGGACCGAACTCTTTTGC+TGG | - | chr4.2:84665397-84665416 | MS.gene70045:intron | 50.0% |
| !! | GCTGGTTTGGACAACCAAAC+TGG | + | chr4.2:84665498-84665517 | None:intergenic | 50.0% |
| !! | GGAATGTTTAGGGGCTGGTT+TGG | + | chr4.2:84665511-84665530 | None:intergenic | 50.0% |
| !! | GTGTAGGCTTTGAGCTTCCT+TGG | - | chr4.2:84665971-84665990 | MS.gene70045:CDS | 50.0% |
| CAGGGACACCAGTCATACAG+TGG | - | chr4.2:84665569-84665588 | MS.gene70045:CDS | 55.0% | |
| CATCTGCATGGAGGACAGCA+AGG | + | chr4.2:84664002-84664021 | None:intergenic | 55.0% | |
| GTTTGTCCCGATCCAATCGG+GGG | - | chr4.2:84664343-84664362 | MS.gene70045:CDS | 55.0% | |
| ! | TGGTGCCGAGTGGAAGAGAT+AGG | + | chr4.2:84663568-84663587 | None:intergenic | 55.0% |
| ! | AGACGAACGATGGTGCCGAG+TGG | + | chr4.2:84663578-84663597 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.2 | gene | 84663449 | 84666144 | 84663449 | ID=MS.gene70045 |
| chr4.2 | mRNA | 84663449 | 84666144 | 84663449 | ID=MS.gene70045.t1;Parent=MS.gene70045 |
| chr4.2 | exon | 84665503 | 84666144 | 84665503 | ID=MS.gene70045.t1.exon1;Parent=MS.gene70045.t1 |
| chr4.2 | CDS | 84665503 | 84666144 | 84665503 | ID=cds.MS.gene70045.t1;Parent=MS.gene70045.t1 |
| chr4.2 | exon | 84663693 | 84664472 | 84663693 | ID=MS.gene70045.t1.exon2;Parent=MS.gene70045.t1 |
| chr4.2 | CDS | 84663693 | 84664472 | 84663693 | ID=cds.MS.gene70045.t1;Parent=MS.gene70045.t1 |
| chr4.2 | exon | 84663449 | 84663616 | 84663449 | ID=MS.gene70045.t1.exon3;Parent=MS.gene70045.t1 |
| chr4.2 | CDS | 84663449 | 84663616 | 84663449 | ID=cds.MS.gene70045.t1;Parent=MS.gene70045.t1 |
| Gene Sequence |
| Protein sequence |