AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene037648

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene037648.t1 MTR_4g017830 73.258 531 133 6 1 526 1 527 0.0 758
MS.gene037648.t1 MTR_4g019340 77.459 488 78 4 12 489 37 502 0.0 729
MS.gene037648.t1 MTR_4g019340 28.112 249 139 7 271 494 39 272 4.36e-12 68.9
MS.gene037648.t1 MTR_4g017440 65.098 510 168 7 1 504 1 506 0.0 628
MS.gene037648.t1 MTR_4g017410 62.597 516 153 9 8 509 4 493 0.0 607
MS.gene037648.t1 MTR_4g017470 60.501 519 155 9 1 509 1 479 0.0 568
MS.gene037648.t1 MTR_4g017550 64.819 469 144 10 40 500 18 473 0.0 564
MS.gene037648.t1 MTR_4g017610 59.639 498 176 9 1 496 1 475 0.0 563
MS.gene037648.t1 MTR_4g019310 43.478 506 256 12 1 496 1 486 1.64e-124 374
MS.gene037648.t1 MTR_7g066340 34.871 542 268 15 3 528 2 474 1.45e-85 273
MS.gene037648.t1 MTR_7g066260 34.451 537 276 13 9 527 11 489 4.03e-84 270
MS.gene037648.t1 MTR_7g066570 36.832 524 271 17 1 504 1 484 7.72e-83 268
MS.gene037648.t1 MTR_7g066410 35.405 531 279 18 9 500 7 512 1.40e-80 261
MS.gene037648.t1 MTR_7g058710 33.779 524 288 13 1 506 1 483 4.21e-79 256
MS.gene037648.t1 MTR_7g066350 34.990 503 254 12 7 496 3 445 7.80e-79 254
MS.gene037648.t1 MTR_7g066430 35.673 513 278 15 14 503 5 488 1.07e-77 253
MS.gene037648.t1 MTR_7g012680 35.632 522 242 16 2 504 3 449 1.00e-76 249
MS.gene037648.t1 MTR_7g012680 25.403 248 136 7 258 494 2 211 4.16e-14 75.1
MS.gene037648.t1 MTR_7g066400 33.669 496 241 13 14 496 13 433 2.74e-70 232
MS.gene037648.t1 MTR_1g041315 33.529 510 254 18 1 484 1 451 3.44e-70 233
MS.gene037648.t1 MTR_7g066360 34.508 539 280 16 1 528 1 477 1.54e-68 228
MS.gene037648.t1 MTR_7g063880 33.010 515 287 16 1 505 1 467 2.53e-66 222
MS.gene037648.t1 MTR_7g062300 33.464 511 289 14 1 499 1 472 1.23e-65 220
MS.gene037648.t1 MTR_7g062280 33.647 532 286 17 1 506 1 491 2.61e-64 218
MS.gene037648.t1 MTR_7g063660 33.730 504 287 16 14 506 10 477 5.83e-64 216
MS.gene037648.t1 MTR_7g063660 30.962 239 135 9 265 493 4 222 1.21e-18 89.4
MS.gene037648.t1 MTR_7g063900 34.109 516 290 18 1 500 1 482 1.78e-63 215
MS.gene037648.t1 MTR_7g063840 31.765 510 296 13 8 506 5 473 3.89e-62 211
MS.gene037648.t1 MTR_7g066290 37.228 368 199 9 9 361 11 361 1.67e-59 203
MS.gene037648.t1 MTR_7g066290 27.174 184 107 6 270 442 15 182 1.31e-11 67.0
MS.gene037648.t1 MTR_7g063890 34.423 520 286 17 6 506 22 505 7.92e-59 203
MS.gene037648.t1 MTR_7g066580 31.633 490 268 13 19 493 1 438 1.13e-58 201
MS.gene037648.t1 MTR_4g019240 81.452 124 19 3 1 123 1 121 1.49e-58 192
MS.gene037648.t1 MTR_4g019240 87.671 73 9 0 458 530 112 184 1.55e-33 126
MS.gene037648.t1 MTR_7g063820 33.588 524 290 18 1 506 1 484 1.98e-56 196
MS.gene037648.t1 MTR_7g063830 31.621 506 259 16 9 500 6 438 3.94e-56 194
MS.gene037648.t1 MTR_2g029400 30.722 485 240 10 9 488 10 403 7.34e-53 185
MS.gene037648.t1 MTR_2g029400 35.135 111 63 3 258 361 4 112 2.91e-11 65.9
MS.gene037648.t1 MTR_7g063920 30.000 510 279 12 1 506 1 436 5.80e-52 183
MS.gene037648.t1 MTR_7g063670 29.630 513 274 14 12 506 14 457 5.54e-50 178
MS.gene037648.t1 MTR_7g066490 30.691 492 235 13 14 500 17 407 8.91e-50 177
MS.gene037648.t1 MTR_3g065200 29.098 488 263 15 14 494 4 415 7.77e-47 170
MS.gene037648.t1 MTR_7g058700 34.722 360 152 13 25 353 531 838 9.79e-47 175
MS.gene037648.t1 MTR_7g066480 30.677 502 236 16 14 500 17 421 8.67e-45 163
MS.gene037648.t1 MTR_7g066480 27.119 236 138 9 270 493 16 229 3.95e-11 65.5
MS.gene037648.t1 MTR_7g066280 28.507 442 245 12 100 511 1 401 2.17e-43 159
MS.gene037648.t1 MTR_3g007740 29.240 513 279 17 1 500 1 442 1.26e-42 158
MS.gene037648.t1 MTR_7g066310 35.270 241 112 6 273 511 196 394 6.25e-34 133
MS.gene037648.t1 MTR_7g066310 39.865 148 74 4 14 154 8 147 4.53e-25 107
MS.gene037648.t1 MTR_7g066680 30.841 321 161 10 218 496 33 334 2.32e-28 116
MS.gene037648.t1 MTR_1g014060 34.211 228 125 7 22 241 9 219 1.58e-27 114
MS.gene037648.t1 MTR_1g014060 35.122 205 99 7 300 500 210 384 4.20e-18 86.7
MS.gene037648.t1 MTR_7g063720 32.340 235 126 4 265 496 18 222 2.27e-26 107
MS.gene037648.t1 MTR_8g023240 24.630 540 327 20 6 524 31 511 5.53e-25 108
MS.gene037648.t1 MTR_7g100420 29.878 328 195 9 175 496 95 393 4.55e-23 101
MS.gene037648.t1 MTR_4g019350 51.042 96 35 2 328 421 1 86 2.51e-22 91.7
MS.gene037648.t1 MTR_7g062270 34.715 193 102 4 8 193 5 180 2.95e-22 99.4
MS.gene037648.t1 MTR_8g445860 31.330 233 139 6 270 494 13 232 9.79e-22 94.7
MS.gene037648.t1 MTR_8g445860 30.833 240 139 6 14 243 14 236 2.43e-19 87.8
MS.gene037648.t1 MTR_1g115440 30.579 242 144 7 264 494 5 233 5.08e-21 92.8
MS.gene037648.t1 MTR_1g115440 28.512 242 151 4 11 243 9 237 1.19e-20 91.7
MS.gene037648.t1 MTR_0150s0010 31.579 228 148 6 270 494 10 232 2.83e-19 87.4
MS.gene037648.t1 MTR_0150s0010 28.631 241 146 5 14 243 11 236 7.17e-18 83.6
MS.gene037648.t1 MTR_7g063850 28.395 243 152 6 268 506 64 288 2.65e-18 85.9
MS.gene037648.t1 MTR_1g115450 40.476 84 48 1 265 346 2 85 2.25e-15 73.6
MS.gene037648.t1 MTR_1g115450 34.211 114 62 1 14 127 8 108 4.53e-12 64.3
MS.gene037648.t1 MTR_1g115455 37.931 87 52 1 262 346 1 87 5.13e-14 72.0
MS.gene037648.t1 MTR_1g115455 26.383 235 155 3 14 243 10 231 1.05e-11 65.5
MS.gene037648.t1 MTR_0150s0030 33.645 107 62 2 264 367 2 102 8.58e-14 70.9
MS.gene037648.t1 MTR_8g445910 34.579 107 61 2 264 367 2 102 1.83e-13 71.2
MS.gene037648.t1 MTR_8g044880 38.889 90 51 2 264 350 2 90 3.53e-13 70.5
MS.gene037648.t1 MTR_8g445920 40.909 66 39 0 270 335 10 75 1.65e-12 64.3
MS.gene037648.t1 MTR_8g044890 40.909 66 39 0 270 335 10 75 1.65e-12 64.3
MS.gene037648.t1 MTR_4g019330 27.477 222 92 6 284 505 32 184 2.79e-12 65.9
MS.gene037648.t1 MTR_7g066390 36.752 117 68 2 414 530 41 151 3.32e-11 62.0
MS.gene037648.t1 MTR_1g115470 40.506 79 45 1 270 346 6 84 5.65e-11 65.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene037648.t1 AT5G01120 32.470 502 302 11 10 496 6 485 2.14e-67 226
MS.gene037648.t1 AT5G01130 32.994 491 270 14 9 496 6 440 2.69e-66 222
MS.gene037648.t1 AT5G01130 27.925 265 150 11 265 516 4 240 1.08e-13 73.6
MS.gene037648.t1 AT5G43240 31.631 509 293 13 14 496 10 489 3.77e-62 212
MS.gene037648.t1 AT5G43240 31.631 509 293 13 14 496 10 489 3.77e-62 212
MS.gene037648.t1 AT5G43240 31.631 509 293 13 14 496 10 489 3.77e-62 212
MS.gene037648.t1 AT3G09140 32.755 519 278 18 12 496 8 489 1.04e-60 208
MS.gene037648.t1 AT5G01140 31.559 526 292 18 10 528 7 471 3.31e-57 198
MS.gene037648.t1 AT3G09140 31.079 547 278 19 12 496 8 517 2.42e-55 194
MS.gene037648.t1 AT5G01150 31.275 502 299 13 9 496 6 475 4.12e-55 193
MS.gene037648.t1 AT5G01150 25.670 261 155 8 265 503 4 247 2.44e-12 69.7
MS.gene037648.t1 AT3G09110 36.716 335 178 11 9 331 6 318 8.18e-53 183
MS.gene037648.t1 AT3G09110 28.333 240 143 5 265 493 4 225 1.11e-13 72.8
MS.gene037648.t1 AT3G09120 35.077 325 179 11 14 324 7 313 3.84e-48 169
MS.gene037648.t1 AT3G09120 30.043 233 146 7 270 494 6 229 1.22e-21 96.3
MS.gene037648.t1 AT5G37320 29.960 504 290 16 20 501 18 480 3.25e-45 166
MS.gene037648.t1 AT5G43240 29.412 374 227 8 161 516 14 368 1.78e-32 128

Find 113 sgRNAs with CRISPR-Local

Find 217 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GTTCTTGTTGATCATTGTTC+TGG 0.156707 4.3:-79658289 None:intergenic
GGAAAATGGGTCATTGTTTC+TGG 0.156709 4.3:+79658640 MS.gene037648:CDS
TGGTGGGCTGTCTTTGTTCT+TGG 0.207956 4.3:-79660159 None:intergenic
AACGATTCACATGGATTCTT+TGG 0.212815 4.3:-79658428 None:intergenic
GGGGTCTTTCTTAAGGAAAA+TGG 0.214850 4.3:+79658626 MS.gene037648:CDS
AATCACTTTCTACTAATTCT+TGG 0.246524 4.3:+79660756 MS.gene037648:CDS
CAGGGGAATGAGGTACAAAA+TGG 0.288766 4.3:+79658605 MS.gene037648:CDS
AAAGATTGTGCCAAGTTCTT+TGG 0.297409 4.3:+79658676 MS.gene037648:CDS
CCCACCGCTACGTATTATTA+TGG 0.303524 4.3:+79660521 MS.gene037648:CDS
TAATAAACAGCCTAAGGATT+TGG 0.303916 4.3:+79658571 MS.gene037648:CDS
TTCTGATTTGACTCAATTAC+AGG 0.305846 4.3:+79658733 MS.gene037648:CDS
GATTCTGAGAGGAATGGTTT+TGG 0.314737 4.3:-79658150 None:intergenic
ATGCAGATATTGGTGGAATC+AGG 0.322458 4.3:+79658707 MS.gene037648:CDS
ATAACTCAGTGTACAAGTTT+AGG 0.324914 4.3:-79661377 None:intergenic
GGATTTGGATTCTGCGGGTC+AGG 0.328144 4.3:+79658586 MS.gene037648:CDS
ATCGACTTGCTAGGAGATCT+TGG 0.335702 4.3:-79660668 None:intergenic
TTCTTGTTGATCATTGTTCT+GGG 0.338067 4.3:-79658288 None:intergenic
AGGGTCCATTGTAAAGGTTT+TGG 0.343635 4.3:+79660337 MS.gene037648:CDS
AGCTTCCTTACAATACCATT+AGG 0.351633 4.3:+79660317 MS.gene037648:CDS
ACTGCTGATGCAAACTGATT+TGG 0.359241 4.3:-79660179 None:intergenic
GAGAGTGTCAACGAAGTCTT+TGG 0.363125 4.3:-79658216 None:intergenic
ACAGGGTTCCAAACATCATT+TGG 0.367250 4.3:-79658383 None:intergenic
ACAAAATGGGGTCTTTCTTA+AGG 0.368979 4.3:+79658619 MS.gene037648:CDS
CATTGTTCTGGGTGGTTAAG+AGG 0.378910 4.3:-79658277 None:intergenic
CCCTCACTCCAAATGATGTT+TGG 0.379098 4.3:+79658375 MS.gene037648:CDS
GCTTCCTTACAATACCATTA+GGG 0.381396 4.3:+79660318 MS.gene037648:CDS
GGAATGTTGAGGGGCTGCTT+TGG 0.386519 4.3:-79660485 None:intergenic
GGTGACTTCCATGCAGATAT+TGG 0.389389 4.3:+79658697 MS.gene037648:CDS
TAGAGAACTTGGACTCTTCC+TGG 0.392959 4.3:+79660405 MS.gene037648:CDS
CAAAGTGTGTTGAAACTAGT+AGG 0.403580 4.3:+79661333 MS.gene037648:CDS
ACTAGTTTCAACACACTTTG+AGG 0.417024 4.3:-79661330 None:intergenic
AGGAGTGATTTCTAAGACAA+TGG 0.425580 4.3:+79660607 MS.gene037648:CDS
ATCCTTAGGCTGTTTATTAG+TGG 0.429803 4.3:-79658567 None:intergenic
CAGCGGCTCATGAGAGGTTA+AGG 0.429816 4.3:-79660111 None:intergenic
CCAAACTGTGGTGCGACATC+AGG 0.429972 4.3:-79660458 None:intergenic
GGGTCTTTCTTAAGGAAAAT+GGG 0.432709 4.3:+79658627 MS.gene037648:CDS
CCTGATGTCGCACCACAGTT+TGG 0.436855 4.3:+79660458 MS.gene037648:CDS
CAGGAAGTCACACACAACTT+TGG 0.438918 4.3:+79658752 MS.gene037648:CDS
CAGAATCTTGATTGTACTTG+TGG 0.438965 4.3:+79658539 MS.gene037648:CDS
TCCTTAGGCTGTTTATTAGT+GGG 0.446992 4.3:-79658566 None:intergenic
ACCATTAGGGTCCATTGTAA+AGG 0.460196 4.3:+79660331 MS.gene037648:CDS
AGGGGAATGAGGTACAAAAT+GGG 0.470146 4.3:+79658606 MS.gene037648:CDS
GATTTGGATTCTGCGGGTCA+GGG 0.473333 4.3:+79658587 MS.gene037648:CDS
ACCTTTACAATGGACCCTAA+TGG 0.477568 4.3:-79660332 None:intergenic
TTATAGTACAATGGAAATAC+CGG 0.479232 4.3:+79660583 MS.gene037648:CDS
AACAACATTTGTTTGCAGAC+AGG 0.485916 4.3:-79658401 None:intergenic
TTTCACCTGAGGAATGTTGA+GGG 0.491518 4.3:-79660495 None:intergenic
CCAAACATCATTTGGAGTGA+GGG 0.493650 4.3:-79658375 None:intergenic
ACAACATTTGTTTGCAGACA+GGG 0.497506 4.3:-79658400 None:intergenic
AGACCAGCATTATATGTTGT+AGG 0.499652 4.3:+79660716 MS.gene037648:CDS
ATGGAAGTCACCAAAGAACT+TGG 0.501440 4.3:-79658686 None:intergenic
AAGATAATCTTTGCAGAAGC+CGG 0.503751 4.3:+79660269 MS.gene037648:CDS
TCTTGGATCCATTGCAGTCA+AGG 0.503976 4.3:-79660651 None:intergenic
GCTGATGCAAACTGATTTGG+TGG 0.511585 4.3:-79660176 None:intergenic
GTACAAGAGTGTAGAGAACT+TGG 0.512946 4.3:+79660394 MS.gene037648:CDS
TGGACCCTAATGGTATTGTA+AGG 0.526033 4.3:-79660322 None:intergenic
CCTAAGGATTTGGATTCTGC+GGG 0.528333 4.3:+79658581 MS.gene037648:CDS
GGAGTGATTTCTAAGACAAT+GGG 0.529024 4.3:+79660608 MS.gene037648:CDS
TAGTAGCAAGTGGAAGAGAA+AGG 0.530533 4.3:-79658247 None:intergenic
TGCAGATATTGGTGGAATCA+GGG 0.535787 4.3:+79658708 MS.gene037648:CDS
GCCTAAGGATTTGGATTCTG+CGG 0.536794 4.3:+79658580 MS.gene037648:CDS
TTCTGCGGGTCAGGGGAATG+AGG 0.538908 4.3:+79658595 MS.gene037648:CDS
TTCAAAATTGTATTTGTCAG+CGG 0.539322 4.3:-79660128 None:intergenic
ACCCACTAATAAACAGCCTA+AGG 0.539763 4.3:+79658565 MS.gene037648:CDS
ACATCTTTAATCGACTTGCT+AGG 0.540540 4.3:-79660677 None:intergenic
TGAACATTGATGACACTGAA+TGG 0.541744 4.3:+79658468 MS.gene037648:CDS
CCCGCAGAATCCAAATCCTT+AGG 0.543635 4.3:-79658581 None:intergenic
CCTTCACTTCAAGATCATCA+AGG 0.544271 4.3:-79660808 None:intergenic
GTCTTAGAAATCACTCCTCC+CGG 0.545356 4.3:-79660602 None:intergenic
AGGTTAAGGTGTACTTCAGA+AGG 0.546418 4.3:-79660097 None:intergenic
ATTTGGATTCTGCGGGTCAG+GGG 0.554626 4.3:+79658588 MS.gene037648:CDS
TCTCCTACAACATATAATGC+TGG 0.557766 4.3:-79660719 None:intergenic
CTTCAAGATCATCAAGGGGA+AGG 0.560418 4.3:-79660802 None:intergenic
GCAGCCCCTCAACATTCCTC+AGG 0.561565 4.3:+79660490 MS.gene037648:CDS
TCCAAACATCATTTGGAGTG+AGG 0.565006 4.3:-79658376 None:intergenic
TGCAAAAGCCTTGACTGCAA+TGG 0.568548 4.3:+79660643 MS.gene037648:CDS
GATAAGCATTGGTGAAGTTG+AGG 0.574626 4.3:+79660832 MS.gene037648:CDS
TTGATGTCAAAGAAGCTGCT+AGG 0.575782 4.3:-79661244 None:intergenic
CTTCACTTCAAGATCATCAA+GGG 0.577068 4.3:-79660807 None:intergenic
TATGAAGATTCTGAGAGGAA+TGG 0.577641 4.3:-79658156 None:intergenic
TCAAAATCTACACTGACTAG+TGG 0.579892 4.3:+79661263 MS.gene037648:CDS
ACCATCCAAAACCTTTACAA+TGG 0.583435 4.3:-79660342 None:intergenic
ACCATAATAATACGTAGCGG+TGG 0.586241 4.3:-79660522 None:intergenic
CAAGTCGATTAAAGATGTGG+TGG 0.586241 4.3:+79660682 MS.gene037648:CDS
AAAGTGTGTTGAAACTAGTA+GGG 0.586448 4.3:+79661334 MS.gene037648:CDS
TCAGAATCATCATCATTCCT+CGG 0.586673 4.3:+79658320 MS.gene037648:CDS
GACTTCCATGCAGATATTGG+TGG 0.595400 4.3:+79658700 MS.gene037648:CDS
TACTGATCGTTATAGTACAA+TGG 0.595723 4.3:+79660574 MS.gene037648:CDS
TTCACCTGAGGAATGTTGAG+GGG 0.607189 4.3:-79660494 None:intergenic
ATTTGTCAGCGGCTCATGAG+AGG 0.608178 4.3:-79660117 None:intergenic
CCTTGATGATCTTGAAGTGA+AGG 0.611182 4.3:+79660808 MS.gene037648:CDS
GGAGCGTGAGTTTGTACACC+AGG 0.618192 4.3:-79660423 None:intergenic
AGGCGAATGATAGTAGCAAG+TGG 0.618314 4.3:-79658257 None:intergenic
TTGTTGATCATTGTTCTGGG+TGG 0.620017 4.3:-79658285 None:intergenic
TAGCAAGTCGATTAAAGATG+TGG 0.622249 4.3:+79660679 MS.gene037648:CDS
AAGTCGATTAAAGATGTGGT+GGG 0.625379 4.3:+79660683 MS.gene037648:CDS
CCATAATAATACGTAGCGGT+GGG 0.627000 4.3:-79660521 None:intergenic
TGGTACAAGAAAGCAAGAGA+AGG 0.627443 4.3:+79660541 MS.gene037648:CDS
TGATTCCACCAATATCTGCA+TGG 0.636872 4.3:-79658705 None:intergenic
GGGTTTGTACGCTTTCATAG+AGG 0.642551 4.3:-79658355 None:intergenic
ACACAACTTTGGAAAGCAAG+AGG 0.646892 4.3:+79658763 MS.gene037648:CDS
GAAGTGAAGGTGATAAGCAT+TGG 0.654807 4.3:+79660821 MS.gene037648:CDS
CTGATGCAAACTGATTTGGT+GGG 0.662163 4.3:-79660175 None:intergenic
ATGTCAAAGAAGCTGCTAGG+AGG 0.665227 4.3:-79661241 None:intergenic
TATAGTACAATGGAAATACC+GGG 0.666239 4.3:+79660584 MS.gene037648:CDS
GGGGAATGAGGTACAAAATG+GGG 0.670340 4.3:+79658607 MS.gene037648:CDS
TGCTTTGGACAACCAAACTG+TGG 0.670639 4.3:-79660470 None:intergenic
TTGTCTATGAAGATTCTGAG+AGG 0.671175 4.3:-79658161 None:intergenic
TTCTTGCATAACGATTCACA+TGG 0.676577 4.3:-79658437 None:intergenic
TTCACTTCAAGATCATCAAG+GGG 0.677198 4.3:-79660806 None:intergenic
GACATCAGGATTGAGTAACA+CGG 0.749959 4.3:-79660444 None:intergenic
TGTACCATAATAATACGTAG+CGG 0.762243 4.3:-79660525 None:intergenic
AGTACAATGGAAATACCGGG+AGG 0.775052 4.3:+79660587 MS.gene037648:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTTTTTTAAACTTAGTAT+CGG - chr4.3:79659005-79659024 None:intergenic 10.0%
!! GAAAAAATAATGTAATAAGT+AGG + chr4.3:79659893-79659912 MS.gene037648:intron 15.0%
!! TTAATATTGTAGTAAAATGA+GGG + chr4.3:79659118-79659137 MS.gene037648:intron 15.0%
!!! TTTTTTTTAAACTTAGTATC+GGG - chr4.3:79659004-79659023 None:intergenic 15.0%
!! AAAGATTCATAATTCAAGTA+TGG - chr4.3:79659984-79660003 None:intergenic 20.0%
!! ACTGTTAATAAACAAATCAA+TGG + chr4.3:79659510-79659529 MS.gene037648:intron 20.0%
!! CTTAATATTGTAGTAAAATG+AGG + chr4.3:79659117-79659136 MS.gene037648:intron 20.0%
!! TGTGAATTAAAAACACATTA+GGG - chr4.3:79658894-79658913 None:intergenic 20.0%
!! TTGTGAATTAAAAACACATT+AGG - chr4.3:79658895-79658914 None:intergenic 20.0%
!!! AACTTAAGATAGTTTGTATT+TGG + chr4.3:79660011-79660030 MS.gene037648:intron 20.0%
!!! CTCATTTTACTACAATATTA+AGG - chr4.3:79659119-79659138 None:intergenic 20.0%
!!! TTTTTAGTAAACAATCATGT+TGG + chr4.3:79660893-79660912 MS.gene037648:intron 20.0%
! AAAGAATAGTAAGGAAAGTA+AGG + chr4.3:79659827-79659846 MS.gene037648:intron 25.0%
! AATCACTTTCTACTAATTCT+TGG + chr4.3:79660756-79660775 MS.gene037648:CDS 25.0%
! AATGTATGATAAATCATGAG+TGG + chr4.3:79659548-79659567 MS.gene037648:intron 25.0%
! CCAAACTAACTGATAAATTA+TGG + chr4.3:79659378-79659397 MS.gene037648:intron 25.0%
! CCATAATTTATCAGTTAGTT+TGG - chr4.3:79659381-79659400 None:intergenic 25.0%
! TAATAAGTAGGAGTGAATAA+GGG + chr4.3:79659905-79659924 MS.gene037648:intron 25.0%
! TACAAACTATCTTAAGTTTC+AGG - chr4.3:79660009-79660028 None:intergenic 25.0%
! TACTAAAGTGAGAAAATCAA+TGG - chr4.3:79659586-79659605 None:intergenic 25.0%
! TTATAGTACAATGGAAATAC+CGG + chr4.3:79660583-79660602 MS.gene037648:CDS 25.0%
! TTATCAACCAAACTGATTAA+CGG + chr4.3:79661002-79661021 MS.gene037648:intron 25.0%
! TTCAAAATTGTATTTGTCAG+CGG - chr4.3:79660131-79660150 None:intergenic 25.0%
!! AAAAGAGTAAATAACCGTTT+TGG - chr4.3:79661161-79661180 None:intergenic 25.0%
!!! TAACATCAATTTTAACCTTG+CGG - chr4.3:79660223-79660242 None:intergenic 25.0%
!!! TCTTTTTCTGAGATTTACTT+CGG - chr4.3:79660253-79660272 None:intergenic 25.0%
!!! TTAATTTTTTGAGCTTGCTT+TGG + chr4.3:79659671-79659690 MS.gene037648:intron 25.0%
AAAGTGTGTTGAAACTAGTA+GGG + chr4.3:79661334-79661353 MS.gene037648:CDS 30.0%
AATAGTAAGGAAAGTAAGGA+CGG + chr4.3:79659831-79659850 MS.gene037648:intron 30.0%
ACAATCTAACATGACATCTA+AGG - chr4.3:79658862-79658881 None:intergenic 30.0%
CAATCTAACATGACATCTAA+GGG - chr4.3:79658861-79658880 None:intergenic 30.0%
CCTAAAAACATCAAGCTATA+CGG - chr4.3:79659730-79659749 None:intergenic 30.0%
CTATAATTGTCACACTTTCA+AGG + chr4.3:79661134-79661153 MS.gene037648:intron 30.0%
GCATCAAATTATTACTCGAT+CGG + chr4.3:79659344-79659363 MS.gene037648:intron 30.0%
GTAATAAGTAGGAGTGAATA+AGG + chr4.3:79659904-79659923 MS.gene037648:intron 30.0%
GTATCTATTAAGAACCTGAT+AGG + chr4.3:79659772-79659791 MS.gene037648:intron 30.0%
TAATAAACAGCCTAAGGATT+TGG + chr4.3:79658571-79658590 MS.gene037648:CDS 30.0%
TAATTGTGGTCGCAATATAA+AGG - chr4.3:79659203-79659222 None:intergenic 30.0%
TACTGATCGTTATAGTACAA+TGG + chr4.3:79660574-79660593 MS.gene037648:CDS 30.0%
TATAGTACAATGGAAATACC+GGG + chr4.3:79660584-79660603 MS.gene037648:CDS 30.0%
TGTACCATAATAATACGTAG+CGG - chr4.3:79660528-79660547 None:intergenic 30.0%
TTCTTGTTGATCATTGTTCT+GGG - chr4.3:79658291-79658310 None:intergenic 30.0%
! TTCTGATTTGACTCAATTAC+AGG + chr4.3:79658733-79658752 MS.gene037648:CDS 30.0%
!! AACATCAATTTTAACCTTGC+GGG - chr4.3:79660222-79660241 None:intergenic 30.0%
!! CGTATAGCTTGATGTTTTTA+GGG + chr4.3:79659728-79659747 MS.gene037648:intron 30.0%
!! TCGCAATATAAAGGTTTTAG+AGG - chr4.3:79659194-79659213 None:intergenic 30.0%
AAAGATTGTGCCAAGTTCTT+TGG + chr4.3:79658676-79658695 MS.gene037648:CDS 35.0%
AACAACATTTGTTTGCAGAC+AGG - chr4.3:79658404-79658423 None:intergenic 35.0%
AACGATTCACATGGATTCTT+TGG - chr4.3:79658431-79658450 None:intergenic 35.0%
AAGATAATCTTTGCAGAAGC+CGG + chr4.3:79660269-79660288 MS.gene037648:CDS 35.0%
AAGTCGATTAAAGATGTGGT+GGG + chr4.3:79660683-79660702 MS.gene037648:CDS 35.0%
ACAAAATGGGGTCTTTCTTA+AGG + chr4.3:79658619-79658638 MS.gene037648:CDS 35.0%
ACAACATTTGTTTGCAGACA+GGG - chr4.3:79658403-79658422 None:intergenic 35.0%
ACCATCCAAAACCTTTACAA+TGG - chr4.3:79660345-79660364 None:intergenic 35.0%
ACCGAAATGTAGAACTACAT+TGG + chr4.3:79659232-79659251 MS.gene037648:intron 35.0%
ACTAACGTAAGACACATTCA+TGG - chr4.3:79660978-79660997 None:intergenic 35.0%
AGACCAGCATTATATGTTGT+AGG + chr4.3:79660716-79660735 MS.gene037648:CDS 35.0%
AGCTTCCTTACAATACCATT+AGG + chr4.3:79660317-79660336 MS.gene037648:CDS 35.0%
AGTAAGGACGGAAAATAATG+CGG + chr4.3:79659843-79659862 MS.gene037648:intron 35.0%
ATCCTAATTCCTAAAACGAC+AGG - chr4.3:79659463-79659482 None:intergenic 35.0%
ATCCTTAGGCTGTTTATTAG+TGG - chr4.3:79658570-79658589 None:intergenic 35.0%
CAAAGTGTGTTGAAACTAGT+AGG + chr4.3:79661333-79661352 MS.gene037648:CDS 35.0%
CAATTCAGTACCTGGAATTA+TGG - chr4.3:79659635-79659654 None:intergenic 35.0%
CAGAATCTTGATTGTACTTG+TGG + chr4.3:79658539-79658558 MS.gene037648:CDS 35.0%
CTACGTGAGAAAGAATAGTA+AGG + chr4.3:79659818-79659837 MS.gene037648:intron 35.0%
CTTCACTTCAAGATCATCAA+GGG - chr4.3:79660810-79660829 None:intergenic 35.0%
GACACCATCTCACATATTTA+AGG - chr4.3:79660920-79660939 None:intergenic 35.0%
GCTTCCTTACAATACCATTA+GGG + chr4.3:79660318-79660337 MS.gene037648:CDS 35.0%
GGGTCTTTCTTAAGGAAAAT+GGG + chr4.3:79658627-79658646 MS.gene037648:CDS 35.0%
GTTCTTGTTGATCATTGTTC+TGG - chr4.3:79658292-79658311 None:intergenic 35.0%
TAACCCACAAAAATTGGCAT+CGG - chr4.3:79658968-79658987 None:intergenic 35.0%
TAGCAAGTCGATTAAAGATG+TGG + chr4.3:79660679-79660698 MS.gene037648:CDS 35.0%
TCAGAATCATCATCATTCCT+CGG + chr4.3:79658320-79658339 MS.gene037648:CDS 35.0%
TCCTTAGGCTGTTTATTAGT+GGG - chr4.3:79658569-79658588 None:intergenic 35.0%
TCTCCTACAACATATAATGC+TGG - chr4.3:79660722-79660741 None:intergenic 35.0%
TGGTCCTTAAATATGTGAGA+TGG + chr4.3:79660913-79660932 MS.gene037648:intron 35.0%
TTCACTTCAAGATCATCAAG+GGG - chr4.3:79660809-79660828 None:intergenic 35.0%
TTCTTGCATAACGATTCACA+TGG - chr4.3:79658440-79658459 None:intergenic 35.0%
TTGTCTATGAAGATTCTGAG+AGG - chr4.3:79658164-79658183 None:intergenic 35.0%
! ACTAGTTTCAACACACTTTG+AGG - chr4.3:79661333-79661352 None:intergenic 35.0%
! CCGTATAGCTTGATGTTTTT+AGG + chr4.3:79659727-79659746 MS.gene037648:intron 35.0%
! GAAGTCAACAAAGTTTTCAC+CGG - chr4.3:79660291-79660310 None:intergenic 35.0%
! GCCAATGTAGTTCTACATTT+CGG - chr4.3:79659236-79659255 None:intergenic 35.0%
! TATGAAGATTCTGAGAGGAA+TGG - chr4.3:79658159-79658178 None:intergenic 35.0%
! TCAAAATCTACACTGACTAG+TGG + chr4.3:79661263-79661282 MS.gene037648:CDS 35.0%
! TGAACATTGATGACACTGAA+TGG + chr4.3:79658468-79658487 MS.gene037648:CDS 35.0%
! TTGGATGGTAACTCTTTTGT+TGG + chr4.3:79660356-79660375 MS.gene037648:CDS 35.0%
! TTGGCAATCGTTGATCATTT+TGG + chr4.3:79659251-79659270 MS.gene037648:intron 35.0%
!! ACATCTTTAATCGACTTGCT+AGG - chr4.3:79660680-79660699 None:intergenic 35.0%
!! AGGAGTGATTTCTAAGACAA+TGG + chr4.3:79660607-79660626 MS.gene037648:CDS 35.0%
!! ATCGTTGATCATTTTGGTCT+AGG + chr4.3:79659257-79659276 MS.gene037648:intron 35.0%
!! ATTCTGAGAGGAATGGTTTT+GGG - chr4.3:79658152-79658171 None:intergenic 35.0%
!! CATAATTCCAGGTACTGAAT+TGG + chr4.3:79659633-79659652 MS.gene037648:intron 35.0%
!! GGAGTGATTTCTAAGACAAT+GGG + chr4.3:79660608-79660627 MS.gene037648:CDS 35.0%
!! TCGTTGATCATTTTGGTCTA+GGG + chr4.3:79659258-79659277 MS.gene037648:intron 35.0%
!!! TCCATTGTAAAGGTTTTGGA+TGG + chr4.3:79660341-79660360 MS.gene037648:CDS 35.0%
!!! TCGTTTTAGGAATTAGGATC+AGG + chr4.3:79659464-79659483 MS.gene037648:intron 35.0%
!!! TTACAATGTCCTGTCGTTTT+AGG + chr4.3:79659451-79659470 MS.gene037648:intron 35.0%
AAAGTGCAAACCACAAAGGA+AGG - chr4.3:79661209-79661228 None:intergenic 40.0%
AACATCAAGCTATACGGTGA+AGG - chr4.3:79659724-79659743 None:intergenic 40.0%
AACCCACAAAAATTGGCATC+GGG - chr4.3:79658967-79658986 None:intergenic 40.0%
AAGTGCAAACCACAAAGGAA+GGG - chr4.3:79661208-79661227 None:intergenic 40.0%
ACAGGGTTCCAAACATCATT+TGG - chr4.3:79658386-79658405 None:intergenic 40.0%
ACCAACGAAAGACACATACA+AGG + chr4.3:79661049-79661068 MS.gene037648:intron 40.0%
ACCATAATAATACGTAGCGG+TGG - chr4.3:79660525-79660544 None:intergenic 40.0%
ACCATTAGGGTCCATTGTAA+AGG + chr4.3:79660331-79660350 MS.gene037648:CDS 40.0%
ACCCACTAATAAACAGCCTA+AGG + chr4.3:79658565-79658584 MS.gene037648:CDS 40.0%
ACCGACTAACCCACAAAAAT+TGG - chr4.3:79658974-79658993 None:intergenic 40.0%
ACCTTTACAATGGACCCTAA+TGG - chr4.3:79660335-79660354 None:intergenic 40.0%
ACTGCTGATGCAAACTGATT+TGG - chr4.3:79660182-79660201 None:intergenic 40.0%
AGGGGAATGAGGTACAAAAT+GGG + chr4.3:79658606-79658625 MS.gene037648:CDS 40.0%
AGGTTAAGGTGTACTTCAGA+AGG - chr4.3:79660100-79660119 None:intergenic 40.0%
ATGCAGATATTGGTGGAATC+AGG + chr4.3:79658707-79658726 MS.gene037648:CDS 40.0%
ATGGAAGTCACCAAAGAACT+TGG - chr4.3:79658689-79658708 None:intergenic 40.0%
CAAGTCGATTAAAGATGTGG+TGG + chr4.3:79660682-79660701 MS.gene037648:CDS 40.0%
CACACTTTCAAGGACCAAAA+CGG + chr4.3:79661144-79661163 MS.gene037648:intron 40.0%
CCATAATAATACGTAGCGGT+GGG - chr4.3:79660524-79660543 None:intergenic 40.0%
CCTTCACTTCAAGATCATCA+AGG - chr4.3:79660811-79660830 None:intergenic 40.0%
GAAGTGAAGGTGATAAGCAT+TGG + chr4.3:79660821-79660840 MS.gene037648:CDS 40.0%
GACATCAGGATTGAGTAACA+CGG - chr4.3:79660447-79660466 None:intergenic 40.0%
GCAGTCAAATCCATAATTCC+AGG + chr4.3:79659622-79659641 MS.gene037648:intron 40.0%
GGAAAATGGGTCATTGTTTC+TGG + chr4.3:79658640-79658659 MS.gene037648:CDS 40.0%
GGATCTTCCGTTAATCAGTT+TGG - chr4.3:79661012-79661031 None:intergenic 40.0%
GGGGTCTTTCTTAAGGAAAA+TGG + chr4.3:79658626-79658645 MS.gene037648:CDS 40.0%
TAGTAGCAAGTGGAAGAGAA+AGG - chr4.3:79658250-79658269 None:intergenic 40.0%
TCCTTGTATGTGTCTTTCGT+TGG - chr4.3:79661053-79661072 None:intergenic 40.0%
TGATTCCACCAATATCTGCA+TGG - chr4.3:79658708-79658727 None:intergenic 40.0%
TGCAGATATTGGTGGAATCA+GGG + chr4.3:79658708-79658727 MS.gene037648:CDS 40.0%
TGGACCCTAATGGTATTGTA+AGG - chr4.3:79660325-79660344 None:intergenic 40.0%
TGGTACAAGAAAGCAAGAGA+AGG + chr4.3:79660541-79660560 MS.gene037648:CDS 40.0%
TTGATGTCAAAGAAGCTGCT+AGG - chr4.3:79661247-79661266 None:intergenic 40.0%
TTGGTGAAGTTGAGGTAAAG+TGG + chr4.3:79660840-79660859 MS.gene037648:intron 40.0%
TTGTTGATACCCTTCCTTTG+TGG + chr4.3:79661196-79661215 MS.gene037648:intron 40.0%
TTTCACCTGAGGAATGTTGA+GGG - chr4.3:79660498-79660517 None:intergenic 40.0%
! ACACAACTTTGGAAAGCAAG+AGG + chr4.3:79658763-79658782 MS.gene037648:CDS 40.0%
! AGGGTCCATTGTAAAGGTTT+TGG + chr4.3:79660337-79660356 MS.gene037648:CDS 40.0%
! CCAAACATCATTTGGAGTGA+GGG - chr4.3:79658378-79658397 None:intergenic 40.0%
! CCTTGATGATCTTGAAGTGA+AGG + chr4.3:79660808-79660827 MS.gene037648:CDS 40.0%
! GTACAAGAGTGTAGAGAACT+TGG + chr4.3:79660394-79660413 MS.gene037648:CDS 40.0%
! TAAACTTAGTATCGGGTCCA+AGG - chr4.3:79658997-79659016 None:intergenic 40.0%
! TCCAAACATCATTTGGAGTG+AGG - chr4.3:79658379-79658398 None:intergenic 40.0%
! TCTGCTAGTTTGCAGCTTAT+TGG - chr4.3:79659875-79659894 None:intergenic 40.0%
! TTGTTGATCATTGTTCTGGG+TGG - chr4.3:79658288-79658307 None:intergenic 40.0%
! TTTTCACCTGAGGAATGTTG+AGG - chr4.3:79660499-79660518 None:intergenic 40.0%
!! AATTCCAGGTACTGAATTGG+TGG + chr4.3:79659636-79659655 MS.gene037648:intron 40.0%
!! ATCAATTTTAACCTTGCGGG+TGG - chr4.3:79660219-79660238 None:intergenic 40.0%
!! CTGATGCAAACTGATTTGGT+GGG - chr4.3:79660178-79660197 None:intergenic 40.0%
!! GAGAGCATTCGTTGAGATTA+AGG + chr4.3:79659794-79659813 MS.gene037648:intron 40.0%
!! GATAAGCATTGGTGAAGTTG+AGG + chr4.3:79660832-79660851 MS.gene037648:CDS 40.0%
!! GATTCTGAGAGGAATGGTTT+TGG - chr4.3:79658153-79658172 None:intergenic 40.0%
!! TCTAGGGTTAGTTAGAACTC+AGG + chr4.3:79659274-79659293 MS.gene037648:intron 40.0%
!!! AGAGGTTTTTTATGCTTCCG+AGG - chr4.3:79658340-79658359 None:intergenic 40.0%
!!! AGGTTTTAGAGGTCTTTGCA+AGG - chr4.3:79659183-79659202 None:intergenic 40.0%
!!! GCCAATTTTTGTGGGTTAGT+CGG + chr4.3:79658970-79658989 MS.gene037648:intron 40.0%
!!! GTCCTGTCGTTTTAGGAATT+AGG + chr4.3:79659458-79659477 MS.gene037648:intron 40.0%
!!! GTTTTGGGTTCTTCTTGTTG+TGG - chr4.3:79658137-79658156 None:intergenic 40.0%
AAGTGTGAACCGGAAGGTTT+CGG + chr4.3:79659934-79659953 MS.gene037648:intron 45.0%
AGGCGAATGATAGTAGCAAG+TGG - chr4.3:79658260-79658279 None:intergenic 45.0%
AGTAAAAACTTCCACCCGCA+AGG + chr4.3:79660205-79660224 MS.gene037648:CDS 45.0%
AGTACAATGGAAATACCGGG+AGG + chr4.3:79660587-79660606 MS.gene037648:CDS 45.0%
ATCACCACCAATTCAGTACC+TGG - chr4.3:79659643-79659662 None:intergenic 45.0%
ATGTCAAAGAAGCTGCTAGG+AGG - chr4.3:79661244-79661263 None:intergenic 45.0%
CAGGAAGTCACACACAACTT+TGG + chr4.3:79658752-79658771 MS.gene037648:CDS 45.0%
CAGGGGAATGAGGTACAAAA+TGG + chr4.3:79658605-79658624 MS.gene037648:CDS 45.0%
CCCACCGCTACGTATTATTA+TGG + chr4.3:79660521-79660540 MS.gene037648:CDS 45.0%
CCCTCACTCCAAATGATGTT+TGG + chr4.3:79658375-79658394 MS.gene037648:CDS 45.0%
CCTAAGGATTTGGATTCTGC+GGG + chr4.3:79658581-79658600 MS.gene037648:CDS 45.0%
CTGCAAAGTGCAAACCACAA+AGG - chr4.3:79661213-79661232 None:intergenic 45.0%
CTTCAAGATCATCAAGGGGA+AGG - chr4.3:79660805-79660824 None:intergenic 45.0%
GACTTCCATGCAGATATTGG+TGG + chr4.3:79658700-79658719 MS.gene037648:CDS 45.0%
GCCTAAGGATTTGGATTCTG+CGG + chr4.3:79658580-79658599 MS.gene037648:CDS 45.0%
GGGGAATGAGGTACAAAATG+GGG + chr4.3:79658607-79658626 MS.gene037648:CDS 45.0%
GGGTTTGTACGCTTTCATAG+AGG - chr4.3:79658358-79658377 None:intergenic 45.0%
GGTGACTTCCATGCAGATAT+TGG + chr4.3:79658697-79658716 MS.gene037648:CDS 45.0%
GTCTTAGAAATCACTCCTCC+CGG - chr4.3:79660605-79660624 None:intergenic 45.0%
TAGAGAACTTGGACTCTTCC+TGG + chr4.3:79660405-79660424 MS.gene037648:CDS 45.0%
TCAACGAATGCTCTCCTATC+AGG - chr4.3:79659789-79659808 None:intergenic 45.0%
TCGGTCTGCAACTGTAATTG+TGG - chr4.3:79659217-79659236 None:intergenic 45.0%
TCTTGGATCCATTGCAGTCA+AGG - chr4.3:79660654-79660673 None:intergenic 45.0%
TGCAAAAGCCTTGACTGCAA+TGG + chr4.3:79660643-79660662 MS.gene037648:CDS 45.0%
TTCACCTGAGGAATGTTGAG+GGG - chr4.3:79660497-79660516 None:intergenic 45.0%
! CATTGTTCTGGGTGGTTAAG+AGG - chr4.3:79658280-79658299 None:intergenic 45.0%
! CTCCCGATGCCAATTTTTGT+GGG + chr4.3:79658962-79658981 MS.gene037648:intron 45.0%
! CTTTGTGGTTTGCACTTTGC+AGG + chr4.3:79661211-79661230 MS.gene037648:intron 45.0%
! TGCTTTGGACAACCAAACTG+TGG - chr4.3:79660473-79660492 None:intergenic 45.0%
! TGGTTCGTTTGGTCTTCTGA+TGG - chr4.3:79661033-79661052 None:intergenic 45.0%
!! ATCGACTTGCTAGGAGATCT+TGG - chr4.3:79660671-79660690 None:intergenic 45.0%
!! GAGAGTGTCAACGAAGTCTT+TGG - chr4.3:79658219-79658238 None:intergenic 45.0%
!! GCTGATGCAAACTGATTTGG+TGG - chr4.3:79660179-79660198 None:intergenic 45.0%
!! GTGTCTTTCGTTGGTTCGTT+TGG - chr4.3:79661044-79661063 None:intergenic 45.0%
AGGTTTCGGGGAACTTACTC+TGG + chr4.3:79659948-79659967 MS.gene037648:intron 50.0%
AGTGTGAACCGGAAGGTTTC+GGG + chr4.3:79659935-79659954 MS.gene037648:intron 50.0%
ATTTGGATTCTGCGGGTCAG+GGG + chr4.3:79658588-79658607 MS.gene037648:CDS 50.0%
ATTTGTCAGCGGCTCATGAG+AGG - chr4.3:79660120-79660139 None:intergenic 50.0%
CCCGCAGAATCCAAATCCTT+AGG - chr4.3:79658584-79658603 None:intergenic 50.0%
GATTTGGATTCTGCGGGTCA+GGG + chr4.3:79658587-79658606 MS.gene037648:CDS 50.0%
GGAGATTGCAACGACAGTTG+TGG - chr4.3:79659162-79659181 None:intergenic 50.0%
GGTTTCGGGGAACTTACTCT+GGG + chr4.3:79659949-79659968 MS.gene037648:intron 50.0%
GTAAGTTCCCCGAAACCTTC+CGG - chr4.3:79659946-79659965 None:intergenic 50.0%
! AGAGGAGCACACACACATTG+TGG - chr4.3:79658930-79658949 None:intergenic 50.0%
! AGGGATGCAGAAGTGTGAAC+CGG + chr4.3:79659924-79659943 MS.gene037648:intron 50.0%
! ATGCAGAAGTGTGAACCGGA+AGG + chr4.3:79659928-79659947 MS.gene037648:intron 50.0%
! CCACAAAAATTGGCATCGGG+AGG - chr4.3:79658964-79658983 None:intergenic 50.0%
! CCTCCCGATGCCAATTTTTG+TGG + chr4.3:79658961-79658980 MS.gene037648:intron 50.0%
!! TGGTGGGCTGTCTTTGTTCT+TGG - chr4.3:79660162-79660181 None:intergenic 50.0%
!! TTTGTGGGTTAGTCGGTCCT+TGG + chr4.3:79658977-79658996 MS.gene037648:intron 50.0%
CAGCGGCTCATGAGAGGTTA+AGG - chr4.3:79660114-79660133 None:intergenic 55.0%
CCAAACTGTGGTGCGACATC+AGG - chr4.3:79660461-79660480 None:intergenic 55.0%
CCTGATGTCGCACCACAGTT+TGG + chr4.3:79660458-79660477 MS.gene037648:CDS 55.0%
CGGGAGGATTCGAACATGAG+AGG - chr4.3:79658948-79658967 None:intergenic 55.0%
GGAATGTTGAGGGGCTGCTT+TGG - chr4.3:79660488-79660507 None:intergenic 55.0%
GGAGCGTGAGTTTGTACACC+AGG - chr4.3:79660426-79660445 None:intergenic 55.0%
GGATTTGGATTCTGCGGGTC+AGG + chr4.3:79658586-79658605 MS.gene037648:CDS 55.0%
GTGTGAACCGGAAGGTTTCG+GGG + chr4.3:79659936-79659955 MS.gene037648:intron 55.0%
GCAGCCCCTCAACATTCCTC+AGG + chr4.3:79660490-79660509 MS.gene037648:CDS 60.0%
TTCTGCGGGTCAGGGGAATG+AGG + chr4.3:79658595-79658614 MS.gene037648:CDS 60.0%
! GCGGTGGGTGTTTTCACCTG+AGG - chr4.3:79660509-79660528 None:intergenic 60.0%


Chromosome Type Strat End Strand Name
chr4.3 gene 79658119 79661394 79658119 ID=MS.gene037648
chr4.3 mRNA 79658119 79661394 79658119 ID=MS.gene037648.t1;Parent=MS.gene037648
chr4.3 exon 79658119 79658784 79658119 ID=MS.gene037648.t1.exon1;Parent=MS.gene037648.t1
chr4.3 CDS 79658119 79658784 79658119 ID=cds.MS.gene037648.t1;Parent=MS.gene037648.t1
chr4.3 exon 79660089 79660853 79660089 ID=MS.gene037648.t1.exon2;Parent=MS.gene037648.t1
chr4.3 CDS 79660089 79660853 79660089 ID=cds.MS.gene037648.t1;Parent=MS.gene037648.t1
chr4.3 exon 79661233 79661394 79661233 ID=MS.gene037648.t1.exon3;Parent=MS.gene037648.t1
chr4.3 CDS 79661233 79661394 79661233 ID=cds.MS.gene037648.t1;Parent=MS.gene037648.t1
Gene Sequence

>MS.gene037648

ATGGCTTCAGAACAACCACAACAAGAAGAACCCAAAACCATTCCTCTCAGAATCTTCATAGACAAAGAAAACAACAAAGTTGTTGCTGCAGAATCAACCAAAGACTTCGTTGACACTCTCTTCAGCTTCCTTTCTCTTCCACTTGCTACTATCATTCGCCTCTTAACCACCCAGAACAATGATCAACAAGAACAAGAATCTTCAGAATCATCATCATTCCTCGGAAGCATAAAAAACCTCTATGAAAGCGTACAAACCCTCACTCCAAATGATGTTTGGAACCCTGTCTGCAAACAAATGTTGTTGAATCCAAAGAATCCATGTGAATCGTTATGCAAGAAGCTTTTCTTGAACATTGATGACACTGAATGGTCAAGTAAGTTTTTCGTGTGTGATGCTTGTAACAAGTTTACAACTTTTCAGAATCTTGATTGTACTTGTGGAAAACCCACTAATAAACAGCCTAAGGATTTGGATTCTGCGGGTCAGGGGAATGAGGTACAAAATGGGGTCTTTCTTAAGGAAAATGGGTCATTGTTTCTGGTGTCTGATGATTTAAAGATTGTGCCAAGTTCTTTGGTGACTTCCATGCAGATATTGGTGGAATCAGGGTATTCTGATTTGACTCAATTACAGGAAGTCACACACAACTTTGGAAAGCAAGAGGTATGTTTGAAATTCTATTTTGCAATGTAATTTTAATTCACAATGTGTGTGTGTTTTTTTAGTTTTGAGTAAACCCTTAGATGTCATGTTAGATTGTAGAGTAAGACCCTAATGTGTTTTTAATTCACAATGTATTTTTAATCCACAATGTGTGTGTGCTCCTCTCATGTTCGAATCCTCCCGATGCCAATTTTTGTGGGTTAGTCGGTCCTTGGACCCGATACTAAGTTTAAAAAAAAATGTTTGTAGAGTAAGCAAAATTCGAAAAAAAATATTTGAAACTCTGAATCGTTGTTCTAAATTGTAGTCGTAGTTGTTATTACGATGTGAACCTTAATATTGTAGTAAAATGAGGGTAAATGTGCTCAATGCAGCCACAACTGTCGTTGCAATCTCCTTGCAAAGACCTCTAAAACCTTTATATTGCGACCACAATTACAGTTGCAGACCGAAATGTAGAACTACATTGGCAATCGTTGATCATTTTGGTCTAGGGTTAGTTAGAACTCAGGTGTTAACTTTTTTAGTCTAGAGTTAGTTAGAACACAAGCATTCATGAGCATCAAATTATTACTCGATCGGTAATGTCTAGACCAAACTAACTGATAAATTATGGTTTCTACTTTCTAGAGCTTTTCTAAATTTTTCTTGTTTCAGAGAGTATTTTTACAATGTCCTGTCGTTTTAGGAATTAGGATCAGGCTCTTCTGAAGTGAGTAATATCAACTGTTAATAAACAAATCAATGGATGATATTATATGCAAATGTATGATAAATCATGAGTGGTTAAAATATCAACCATTGATTTTCTCACTTTAGTAACTACTCACTTTAAGAGCAGTCAAATCCATAATTCCAGGTACTGAATTGGTGGTGATTCACTCTTTTAATTTTTTGAGCTTGCTTTGGATCTTTAGACTGTTCTTGTATTATGAACCTTCACCGTATAGCTTGATGTTTTTAGGGTAGTATTAATAATTTGACATAGTATCTATTAAGAACCTGATAGGAGAGCATTCGTTGAGATTAAGGTCTACGTGAGAAAGAATAGTAAGGAAAGTAAGGACGGAAAATAATGCGGTTGTAACCAATAAGCTGCAAACTAGCAGAAAAAATAATGTAATAAGTAGGAGTGAATAAGGGATGCAGAAGTGTGAACCGGAAGGTTTCGGGGAACTTACTCTGGGATCTTTAGACCATACTTGAATTATGAATCTTTATCCTGAAACTTAAGATAGTTTGTATTTGGAATAATAACTGATATCTGTTAAGAATATTCTGACAAACACAATTTTGATGTGCAGATGTTGAACCTTCTGAAGTACACCTTAACCTCTCATGAGCCGCTGACAAATACAATTTTGAAAAGCTGCTCCAAGAACAAAGACAGCCCACCAAATCAGTTTGCATCAGCAGTCAGAGTAAAAACTTCCACCCGCAAGGTTAAAATTGATGTTAAGCTAGTCCGAAGTAAATCTCAGAAAAAGATAATCTTTGCAGAAGCCGGTGAAAACTTTGTTGACTTCATGTTTAGCTTCCTTACAATACCATTAGGGTCCATTGTAAAGGTTTTGGATGGTAACTCTTTTGTTGGATGTGTTGATAATTTGTACAAGAGTGTAGAGAACTTGGACTCTTCCTGGTGTACAAACTCACGCTCCGTGTTACTCAATCCTGATGTCGCACCACAGTTTGGTTGTCCAAAGCAGCCCCTCAACATTCCTCAGGTGAAAACACCCACCGCTACGTATTATTATGGTACAAGAAAGCAAGAGAAGGATTATCGCTATACTGATCGTTATAGTACAATGGAAATACCGGGAGGAGTGATTTCTAAGACAATGGGATCAATTTATGATGCAAAAGCCTTGACTGCAATGGATCCAAGATCTCCTAGCAAGTCGATTAAAGATGTGGTGGGATTTGTAAAGAGACCAGCATTATATGTTGTAGGAGATGATCTAAAATTAAAATCACTTTCTACTAATTCTTGGCTTTCATATTTGAAAGAATTAAGCCTTCCCCTTGATGATCTTGAAGTGAAGGTGATAAGCATTGGTGAAGTTGAGGTAAAGTGGCTATTCTTACTGAATTTATCATTTTTTTTCTTTTTAGTAAACAATCATGTTGGTCCTTAAATATGTGAGATGGTGTCACTATAGTCTGAATGTATCAATATCATAAAAACATCCATGAATGTGTCTTACGTTAGTAATTTTATCAACCAAACTGATTAACGGAAGATCCATCAGAAGACCAAACGAACCAACGAAAGACACATACAAGGATTAAACTGAAAAACAAAACACAAATTCTTGTATGTTTTTCTAGTTTTGAAAGATTCATGAACTATAATTGTCACACTTTCAAGGACCAAAACGGTTATTTACTCTTTTGTTTTGTTTTCTTTGTTGTTGATACCCTTCCTTTGTGGTTTGCACTTTGCAGGCTCTGAGCCTCCTAGCAGCTTCTTTGACATCAAAATCTACACTGACTAGTGGACTAGAAGAATTTTTTAATGTGCAAAAACAAGATTCAAATTTGACCTCAAAGTGTGTTGAAACTAGTAGGGTTGATAAAATTGCAAAGAAGCCTAAACTTGTACACTGA
Protein sequence

>MS.gene037648.t1

MASEQPQQEEPKTIPLRIFIDKENNKVVAAESTKDFVDTLFSFLSLPLATIIRLLTTQNNDQQEQESSESSSFLGSIKNLYESVQTLTPNDVWNPVCKQMLLNPKNPCESLCKKLFLNIDDTEWSSKFFVCDACNKFTTFQNLDCTCGKPTNKQPKDLDSAGQGNEVQNGVFLKENGSLFLVSDDLKIVPSSLVTSMQILVESGYSDLTQLQEVTHNFGKQEMLNLLKYTLTSHEPLTNTILKSCSKNKDSPPNQFASAVRVKTSTRKVKIDVKLVRSKSQKKIIFAEAGENFVDFMFSFLTIPLGSIVKVLDGNSFVGCVDNLYKSVENLDSSWCTNSRSVLLNPDVAPQFGCPKQPLNIPQVKTPTATYYYGTRKQEKDYRYTDRYSTMEIPGGVISKTMGSIYDAKALTAMDPRSPSKSIKDVVGFVKRPALYVVGDDLKLKSLSTNSWLSYLKELSLPLDDLEVKVISIGEVEALSLLAASLTSKSTLTSGLEEFFNVQKQDSNLTSKCVETSRVDKIAKKPKLVH