AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0619930


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0619930 MtrunA17_Chr8g0385691 100.000 205 0 0 1 205 49 253 3.80e-152 421
Msa0619930 MtrunA17_Chr8g0385681 92.611 203 15 0 1 203 52 254 1.28e-140 392
Msa0619930 MtrunA17_Chr3g0131581 75.000 204 51 0 1 204 69 272 2.31e-117 334
Msa0619930 MtrunA17_Chr1g0161441 43.961 207 110 3 2 203 32 237 8.37e-56 177
Msa0619930 MtrunA17_Chr1g0155071 35.176 199 122 6 1 195 45 240 5.50e-31 114
Msa0619930 MtrunA17_Chr4g0058811 30.000 160 110 2 1 159 73 231 2.04e-24 96.7
Msa0619930 MtrunA17_Chr4g0058791 27.219 169 121 2 1 168 71 238 4.98e-23 92.8
Msa0619930 MtrunA17_Chr7g0254621 28.934 197 134 5 2 195 47 240 2.19e-22 92.4
Msa0619930 MtrunA17_Chr8g0373391 31.343 201 131 6 2 198 46 243 1.32e-21 89.7
Msa0619930 MtrunA17_Chr3g0115591 30.102 196 131 5 2 194 52 244 1.52e-21 90.1
Msa0619930 MtrunA17_Chr3g0144891 33.491 212 122 5 1 194 97 307 1.30e-19 86.3
Msa0619930 MtrunA17_Chr5g0425421 29.412 170 116 3 2 170 49 215 2.22e-19 84.3
Msa0619930 MtrunA17_Chr1g0205531 28.571 168 118 2 2 168 42 208 4.97e-19 84.0
Msa0619930 MtrunA17_Chr3g0141821 31.797 217 129 7 1 199 93 308 1.38e-18 83.2
Msa0619930 MtrunA17_Chr3g0131071 29.808 208 132 5 1 194 249 456 2.27e-17 79.7
Msa0619930 MtrunA17_Chr8g0372651 31.132 212 127 7 1 194 79 289 2.90e-17 79.3
Msa0619930 MtrunA17_Chr4g0014901 30.952 210 126 7 1 194 271 477 7.95e-17 78.2
Msa0619930 MtrunA17_Chr4g0004981 29.187 209 130 6 1 194 125 330 1.48e-16 77.0
Msa0619930 MtrunA17_Chr4g0035391 32.110 218 127 8 1 199 107 322 1.71e-16 77.4
Msa0619930 MtrunA17_Chr1g0155521 29.493 217 134 6 1 199 112 327 1.96e-16 77.0
Msa0619930 MtrunA17_Chr4g0014911 28.846 208 132 6 1 194 139 344 2.68e-16 76.6
Msa0619930 MtrunA17_Chr5g0404711 29.545 220 130 9 1 199 76 291 3.63e-16 76.3
Msa0619930 MtrunA17_Chr2g0293201 29.327 208 131 8 1 194 144 349 1.27e-15 74.7
Msa0619930 MtrunA17_Chr5g0399151 31.019 216 116 6 4 194 118 325 2.11e-15 73.9
Msa0619930 MtrunA17_Chr8g0385291 27.358 212 130 7 1 194 181 386 7.01e-14 69.7
Msa0619930 MtrunA17_Chr3g0102691 26.168 214 120 8 1 189 33 233 4.09e-12 63.9
Msa0619930 MtrunA17_Chr3g0080051 27.189 217 132 7 4 198 105 317 1.04e-11 63.2
Msa0619930 MtrunA17_Chr4g0035381 28.311 219 124 8 1 194 84 294 4.14e-11 61.2
Msa0619930 MtrunA17_Chr8g0369291 26.168 214 138 7 4 198 93 305 5.08e-11 61.2
Msa0619930 MtrunA17_Chr4g0076441 24.138 203 139 4 2 190 34 235 7.22e-11 60.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0619930 AT1G01630.1 66.667 204 68 0 1 204 52 255 1.33e-103 299
Msa0619930 AT1G14820.3 42.995 207 112 3 2 203 31 236 5.39e-48 157
Msa0619930 AT1G14820.2 42.995 207 112 3 2 203 18 223 5.71e-48 157
Msa0619930 AT1G14820.1 42.995 207 112 3 2 203 18 223 5.71e-48 157
Msa0619930 AT1G75170.2 34.314 204 121 6 2 198 47 244 2.35e-28 108
Msa0619930 AT1G75170.1 34.314 204 121 6 2 198 47 244 2.35e-28 108
Msa0619930 AT4G08690.2 30.102 196 131 4 2 194 46 238 4.94e-27 104
Msa0619930 AT4G08690.1 30.102 196 131 4 2 194 46 238 4.94e-27 104
Msa0619930 AT4G08690.3 30.102 196 131 4 2 194 46 238 4.94e-27 104
Msa0619930 AT4G36640.1 31.841 201 130 5 2 198 44 241 4.78e-26 102
Msa0619930 AT4G36640.3 31.841 201 130 5 2 198 44 241 4.78e-26 102
Msa0619930 AT1G22180.2 31.980 197 128 5 2 195 49 242 1.17e-23 96.3
Msa0619930 AT1G22180.4 31.980 197 128 5 2 195 49 242 1.17e-23 96.3
Msa0619930 AT5G63060.2 30.625 160 109 2 1 159 39 197 2.07e-22 91.3
Msa0619930 AT5G63060.1 32.099 162 104 3 1 159 74 232 5.10e-22 90.9
Msa0619930 AT1G22180.3 30.556 180 119 5 19 195 1 177 6.63e-19 82.4
Msa0619930 AT1G22180.1 30.556 180 119 5 19 195 1 177 6.63e-19 82.4
Msa0619930 AT1G75170.3 34.000 150 88 4 55 198 17 161 9.75e-19 80.9
Msa0619930 AT4G36640.2 28.804 184 124 5 19 198 1 181 1.17e-18 81.3
Msa0619930 AT4G36490.1 30.876 217 131 7 1 199 78 293 1.61e-18 83.6
Msa0619930 AT2G18180.2 30.876 217 131 7 1 199 81 296 1.17e-17 80.9
Msa0619930 AT2G18180.1 30.876 217 131 7 1 199 81 296 1.17e-17 80.9
Msa0619930 AT4G09160.1 29.524 210 128 7 1 194 341 546 1.36e-17 80.9
Msa0619930 AT4G39180.3 31.532 222 123 9 1 199 96 311 1.40e-17 80.9
Msa0619930 AT4G39180.2 31.532 222 123 9 1 199 96 311 1.40e-17 80.9
Msa0619930 AT4G39180.1 31.532 222 123 9 1 199 96 311 1.41e-17 80.9
Msa0619930 AT4G09160.2 29.524 210 128 7 1 194 316 521 1.51e-17 80.9
Msa0619930 AT4G09160.3 29.524 210 128 7 1 194 316 521 1.79e-17 80.5
Msa0619930 AT2G18180.4 30.841 214 129 7 4 199 13 225 4.01e-17 79.3
Msa0619930 AT2G18180.3 30.841 214 129 7 4 199 13 225 4.13e-17 79.3
Msa0619930 AT2G16380.2 31.132 212 127 6 1 194 88 298 2.93e-16 77.0
Msa0619930 AT2G16380.1 31.132 212 127 6 1 194 88 298 2.93e-16 77.0
Msa0619930 AT1G19650.3 30.374 214 130 6 4 199 107 319 2.99e-16 76.6
Msa0619930 AT1G19650.2 30.374 214 130 6 4 199 35 247 3.00e-16 77.0
Msa0619930 AT1G19650.1 30.374 214 130 6 4 199 107 319 4.45e-16 76.3
Msa0619930 AT1G05370.1 27.219 169 122 1 4 172 47 214 9.75e-16 75.1
Msa0619930 AT3G22410.1 26.627 169 122 2 1 168 33 200 3.26e-15 73.6
Msa0619930 AT2G21520.2 31.132 212 127 6 1 194 114 324 4.27e-15 73.6
Msa0619930 AT2G21520.3 31.132 212 127 6 1 194 114 324 4.27e-15 73.6
Msa0619930 AT2G21520.1 31.132 212 127 6 1 194 110 320 4.69e-15 73.6
Msa0619930 AT3G51670.1 27.053 207 136 4 1 194 84 288 1.01e-14 72.4
Msa0619930 AT1G55690.3 29.577 213 124 8 4 194 104 312 2.16e-14 71.6
Msa0619930 AT1G55690.2 29.577 213 124 8 4 194 104 312 2.29e-14 71.6
Msa0619930 AT1G55690.4 29.577 213 124 8 4 194 104 312 2.29e-14 71.6
Msa0619930 AT1G55690.1 29.577 213 124 8 4 194 104 312 2.29e-14 71.6
Msa0619930 AT1G55690.5 29.577 213 124 8 4 194 104 312 2.29e-14 71.6
Msa0619930 AT5G47730.4 27.000 200 131 4 4 189 41 239 1.29e-13 68.9
Msa0619930 AT5G47730.1 27.000 200 131 4 4 189 41 239 1.29e-13 68.9
Msa0619930 AT5G47510.2 28.638 213 133 6 2 196 52 263 1.33e-13 68.6
Msa0619930 AT5G47510.4 28.638 213 133 6 2 196 52 263 1.66e-13 68.6
Msa0619930 AT5G47510.1 28.638 213 133 6 2 196 51 262 1.75e-13 68.6
Msa0619930 AT1G72160.1 26.316 209 136 7 1 194 166 371 4.42e-13 67.8
Msa0619930 AT1G30690.1 28.079 203 135 6 1 194 222 422 5.48e-13 67.4
Msa0619930 AT1G30690.2 28.079 203 135 6 1 194 222 422 5.48e-13 67.4
Msa0619930 AT5G56160.1 29.302 215 128 8 1 194 94 305 3.73e-12 65.1
Msa0619930 AT5G56160.3 29.302 215 128 8 1 194 94 305 3.73e-12 65.1
Msa0619930 AT5G56160.2 29.302 215 128 8 1 194 94 305 3.85e-12 64.7
Msa0619930 AT1G55840.2 25.871 201 134 4 4 190 14 213 1.61e-11 62.4
Msa0619930 AT1G55840.1 26.000 200 133 4 4 189 41 239 1.88e-11 62.4
Msa0619930 AT2G18180.5 29.146 199 122 7 19 199 1 198 2.56e-11 62.4

Find 63 sgRNAs with CRISPR-Local

Find 261 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AACAACTTCCCCAATCTTTC+AGG 0.132673 4_2:+71264278 None:intergenic
CGCAACAGCTCCTTCTCTTT+TGG 0.243312 4_2:-71263442 Msa0619930:three_prime_UTR
CTTGATTTCTAATTTCTTGT+AGG 0.255904 4_2:-71263612 Msa0619930:three_prime_UTR
ATCAACATCAATGGTTAATA+TGG 0.256203 4_2:+71263809 None:intergenic
CGACCAATACTTCTTGTCTT+TGG 0.277733 4_2:-71265248 Msa0619930:CDS
GAGTCCATTAGTAATTTAAT+TGG 0.307515 4_2:-71263500 Msa0619930:three_prime_UTR
TTGTCTTGTGCAATTTGATT+AGG 0.316642 4_2:+71265302 None:intergenic
TAATCAGCACTGGCAAATTA+AGG 0.316967 4_2:-71263943 Msa0619930:three_prime_UTR
ACTTGTTACAATGAGTTTCT+TGG 0.323539 4_2:-71263675 Msa0619930:three_prime_UTR
CTTGTTACAATGAGTTTCTT+GGG 0.334872 4_2:-71263674 Msa0619930:three_prime_UTR
TGAGCCAATTAAATTACTAA+TGG 0.348005 4_2:+71263496 None:intergenic
ATAACGATATACCTGCAAAA+TGG 0.361491 4_2:+71264391 None:intergenic
GACCAATCTTGTCATGTCCT+TGG 0.383685 4_2:+71265270 None:intergenic
AGTCAACTTCCGGAGATATA+CGG 0.395789 4_2:-71264008 Msa0619930:CDS
CTCCTTGCAGATAGTATTTG+TGG 0.396500 4_2:-71264075 Msa0619930:intron
GGATTACTACCCTGAAAGAT+TGG 0.396743 4_2:-71264288 Msa0619930:CDS
TGTTCCTCAAGTACTTGAAA+TGG 0.405903 4_2:-71265370 Msa0619930:CDS
AGACATTCATTTGTTCCAAA+TGG 0.425215 4_2:-71265347 Msa0619930:CDS
GATTACTACCCTGAAAGATT+GGG 0.426754 4_2:-71264287 Msa0619930:CDS
GATAGAGATATGGAACCATT+TGG 0.426836 4_2:+71265332 None:intergenic
CTACAAGAAATTAGAAATCA+AGG 0.434717 4_2:+71263613 None:intergenic
ACCAATCTTGTCATGTCCTT+GGG 0.434729 4_2:+71265271 None:intergenic
CCAATACTTCTTGTCTTTGG+TGG 0.439235 4_2:-71265245 Msa0619930:CDS
TATAGACGAAAGTCAACTTC+CGG 0.447855 4_2:-71264018 Msa0619930:CDS
GATTAGTTTAATAGCTATCC+TGG 0.451945 4_2:+71263961 None:intergenic
AGGAACCTGTGATAGAGATA+TGG 0.459166 4_2:+71265322 None:intergenic
ACAACTTCCCCAATCTTTCA+GGG 0.493166 4_2:+71264279 None:intergenic
CCATTGATGTTGATCAGTCA+TGG 0.513185 4_2:-71263800 Msa0619930:three_prime_UTR
GTTTAATAGCTATCCTGGAT+GGG 0.515671 4_2:+71263966 None:intergenic
AGTTTAATAGCTATCCTGGA+TGG 0.519602 4_2:+71263965 None:intergenic
CTTGTCATGTCCTTGGGCGA+AGG 0.521048 4_2:+71265277 None:intergenic
AGCGATTTGCGTGGATACAT+TGG 0.523132 4_2:-71264422 Msa0619930:CDS
CCACCAAAGACAAGAAGTAT+TGG 0.525066 4_2:+71265245 None:intergenic
GCCCAAGGACATGACAAGAT+TGG 0.525216 4_2:-71265272 Msa0619930:CDS
GCTATTAAACTAATCAGCAC+TGG 0.538907 4_2:-71263953 Msa0619930:exon
CCATGACTGATCAACATCAA+TGG 0.546840 4_2:+71263800 None:intergenic
TGACAACAAAACTAAGAAGA+AGG 0.549893 4_2:-71264198 Msa0619930:intron
GTCTCCATTTCAAGTACTTG+AGG 0.552376 4_2:+71265366 None:intergenic
AGTTTGCCACCGTATATCTC+CGG 0.556856 4_2:+71263999 None:intergenic
TGATGTATCAGCATGCCACC+TGG 0.557220 4_2:-71264497 Msa0619930:intron
TTTAATAGCTATCCTGGATG+GGG 0.558711 4_2:+71263967 None:intergenic
ACTGCAATTAGTCCCCATCC+AGG 0.559870 4_2:-71263979 Msa0619930:CDS
TGGTTCCATATCTCTATCAC+AGG 0.560409 4_2:-71265327 Msa0619930:CDS
CAAGACAAGGCCTTCGCCCA+AGG 0.561144 4_2:-71265287 Msa0619930:CDS
CCAACCACCACCAAAAGAGA+AGG 0.567447 4_2:+71263432 None:intergenic
TATAGCAGAACTCAAAGGAT+GGG 0.572999 4_2:-71264456 Msa0619930:CDS
TACAAGAAATTAGAAATCAA+GGG 0.581251 4_2:+71263614 None:intergenic
TACTTAAACGAAAATAGTCA+AGG 0.594381 4_2:+71263878 None:intergenic
GTATAGCAGAACTCAAAGGA+TGG 0.600715 4_2:-71264457 Msa0619930:CDS
GATGTATCAGCATGCCACCT+GGG 0.601615 4_2:-71264496 Msa0619930:intron
TAATCAAATTGCACAAGACA+AGG 0.608427 4_2:-71265300 Msa0619930:CDS
TCGTGATTTAGATGTAGAGA+AGG 0.617213 4_2:-71265402 Msa0619930:CDS
GTTGGTATAGCAGAACTCAA+AGG 0.623693 4_2:-71264461 Msa0619930:CDS
TTCTTGATAAACTATGTGCA+AGG 0.626670 4_2:-71264590 Msa0619930:intron
TACTCAAATAGCGATTTGCG+TGG 0.626951 4_2:-71264431 Msa0619930:CDS
ATTACTACCCTGAAAGATTG+GGG 0.630792 4_2:-71264286 Msa0619930:CDS
ATGTATCAGCATGCCACCTG+GGG 0.634138 4_2:-71264495 Msa0619930:intron
CTATTAGACTGATAGTTCAG+TGG 0.636665 4_2:-71263837 Msa0619930:three_prime_UTR
ATAGCAGAACTCAAAGGATG+GGG 0.636851 4_2:-71264455 Msa0619930:CDS
ATATACCTGCAAAATGGAGA+GGG 0.661917 4_2:+71264397 None:intergenic
GATATACCTGCAAAATGGAG+AGG 0.677136 4_2:+71264396 None:intergenic
ATGATGTGTGACTGTGAGTG+CGG 0.719666 4_2:-71263571 Msa0619930:three_prime_UTR
CAACTTCCGGAGATATACGG+TGG 0.731093 4_2:-71264005 Msa0619930:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTATGTTAAAAAAAAGTAAA+TGG + chr4_2:71264029-71264048 None:intergenic 10.0%
!! TTATGTTAAAAAAAAGTAAA+TGG + chr4_2:71264029-71264048 None:intergenic 10.0%
!! TTTAATGTTAACTAGATATA+GGG + chr4_2:71263736-71263755 None:intergenic 15.0%
!! ATTTAATGTTAACTAGATAT+AGG + chr4_2:71263737-71263756 None:intergenic 15.0%
!! GTTTAAGTAAATAAAAAGAT+AGG - chr4_2:71265003-71265022 Msa0619930:intron 15.0%
!! TTTAATGTTAACTAGATATA+GGG + chr4_2:71263736-71263755 None:intergenic 15.0%
!! ATTTAATGTTAACTAGATAT+AGG + chr4_2:71263737-71263756 None:intergenic 15.0%
!! GTTTAAGTAAATAAAAAGAT+AGG - chr4_2:71265003-71265022 Msa0619930:intron 15.0%
!! ATTATGTAATGTTTAATTCC+TGG - chr4_2:71264138-71264157 Msa0619930:intron 20.0%
!! GATTATGATTGTTAATTTCT+TGG - chr4_2:71264551-71264570 Msa0619930:intron 20.0%
!! ATTATATATATCTCATTGCA+TGG - chr4_2:71264707-71264726 Msa0619930:intron 20.0%
!! TACAAGAAATTAGAAATCAA+GGG + chr4_2:71265256-71265275 None:intergenic 20.0%
!! ATTATGTAATGTTTAATTCC+TGG - chr4_2:71264138-71264157 Msa0619930:intron 20.0%
!! GATTATGATTGTTAATTTCT+TGG - chr4_2:71264551-71264570 Msa0619930:intron 20.0%
!! ATTATATATATCTCATTGCA+TGG - chr4_2:71264707-71264726 Msa0619930:intron 20.0%
!! TACAAGAAATTAGAAATCAA+GGG + chr4_2:71265256-71265275 None:intergenic 20.0%
! ATTGCTTAAGAATATGTACT+TGG - chr4_2:71263787-71263806 Msa0619930:three_prime_UTR 25.0%
! GAATTTGTGCAATAATCATT+TGG - chr4_2:71263933-71263952 Msa0619930:three_prime_UTR 25.0%
! ATCTCTATTTGAGTATTAGA+GGG - chr4_2:71263961-71263980 Msa0619930:exon 25.0%
!!! TAGTATGTAATATTGGTTTG+TGG - chr4_2:71264164-71264183 Msa0619930:intron 25.0%
! TTGAGAAAATTGTTAATGAG+TGG + chr4_2:71264215-71264234 None:intergenic 25.0%
!!! AGTTTTATAGTACTGGAATA+AGG + chr4_2:71264312-71264331 None:intergenic 25.0%
!!! ATTTCACAGTTTTATAGTAC+TGG + chr4_2:71264319-71264338 None:intergenic 25.0%
! CACACTTTCATAAAAATGTA+CGG + chr4_2:71264628-71264647 None:intergenic 25.0%
!!! TTAGTTTTGTTGTCAATGAA+CGG + chr4_2:71264664-71264683 None:intergenic 25.0%
! TACTTAAACGAAAATAGTCA+AGG + chr4_2:71264992-71265011 None:intergenic 25.0%
! ATCAACATCAATGGTTAATA+TGG + chr4_2:71265061-71265080 None:intergenic 25.0%
! CTACAAGAAATTAGAAATCA+AGG + chr4_2:71265257-71265276 None:intergenic 25.0%
! CTTGATTTCTAATTTCTTGT+AGG - chr4_2:71265255-71265274 Msa0619930:CDS 25.0%
! GAGTCCATTAGTAATTTAAT+TGG - chr4_2:71265367-71265386 Msa0619930:CDS 25.0%
! TGAGCCAATTAAATTACTAA+TGG + chr4_2:71265374-71265393 None:intergenic 25.0%
! ATTGCTTAAGAATATGTACT+TGG - chr4_2:71263787-71263806 Msa0619930:three_prime_UTR 25.0%
! GAATTTGTGCAATAATCATT+TGG - chr4_2:71263933-71263952 Msa0619930:three_prime_UTR 25.0%
! ATCTCTATTTGAGTATTAGA+GGG - chr4_2:71263961-71263980 Msa0619930:exon 25.0%
!!! TAGTATGTAATATTGGTTTG+TGG - chr4_2:71264164-71264183 Msa0619930:intron 25.0%
! TTGAGAAAATTGTTAATGAG+TGG + chr4_2:71264215-71264234 None:intergenic 25.0%
!!! AGTTTTATAGTACTGGAATA+AGG + chr4_2:71264312-71264331 None:intergenic 25.0%
!!! ATTTCACAGTTTTATAGTAC+TGG + chr4_2:71264319-71264338 None:intergenic 25.0%
! CACACTTTCATAAAAATGTA+CGG + chr4_2:71264628-71264647 None:intergenic 25.0%
!!! TTAGTTTTGTTGTCAATGAA+CGG + chr4_2:71264664-71264683 None:intergenic 25.0%
! TACTTAAACGAAAATAGTCA+AGG + chr4_2:71264992-71265011 None:intergenic 25.0%
! ATCAACATCAATGGTTAATA+TGG + chr4_2:71265061-71265080 None:intergenic 25.0%
! CTACAAGAAATTAGAAATCA+AGG + chr4_2:71265257-71265276 None:intergenic 25.0%
! CTTGATTTCTAATTTCTTGT+AGG - chr4_2:71265255-71265274 Msa0619930:CDS 25.0%
! GAGTCCATTAGTAATTTAAT+TGG - chr4_2:71265367-71265386 Msa0619930:CDS 25.0%
! TGAGCCAATTAAATTACTAA+TGG + chr4_2:71265374-71265393 None:intergenic 25.0%
AGACATTCATTTGTTCCAAA+TGG - chr4_2:71263520-71263539 Msa0619930:three_prime_UTR 30.0%
TTGTCTTGTGCAATTTGATT+AGG + chr4_2:71263568-71263587 None:intergenic 30.0%
TAATCAAATTGCACAAGACA+AGG - chr4_2:71263567-71263586 Msa0619930:three_prime_UTR 30.0%
! TGGAAGACATTTTCAAAAGA+AGG - chr4_2:71263642-71263661 Msa0619930:three_prime_UTR 30.0%
! AGACATTTTCAAAAGAAGGA+TGG - chr4_2:71263646-71263665 Msa0619930:three_prime_UTR 30.0%
TGTTAACTAGATATAGGGAT+AGG + chr4_2:71263731-71263750 None:intergenic 30.0%
!! TGAGAGATTTTAGCCATTAT+GGG + chr4_2:71263835-71263854 None:intergenic 30.0%
GATCTCTATTTGAGTATTAG+AGG - chr4_2:71263960-71263979 Msa0619930:exon 30.0%
! AAAAAGTAAATGGTAGCGAA+GGG + chr4_2:71264019-71264038 None:intergenic 30.0%
! AAAAAAGTAAATGGTAGCGA+AGG + chr4_2:71264020-71264039 None:intergenic 30.0%
! AGCAATTTTCTTTGTGATAC+AGG - chr4_2:71264240-71264259 Msa0619930:CDS 30.0%
! GCAATTTTCTTTGTGATACA+GGG - chr4_2:71264241-71264260 Msa0619930:CDS 30.0%
TTCTTGATAAACTATGTGCA+AGG - chr4_2:71264277-71264296 Msa0619930:CDS 30.0%
ATAACGATATACCTGCAAAA+TGG + chr4_2:71264479-71264498 None:intergenic 30.0%
ATTGTTAATTTCTTGGATGC+AGG - chr4_2:71264558-71264577 Msa0619930:intron 30.0%
! CGTACATTTTTATGAAAGTG+TGG - chr4_2:71264626-71264645 Msa0619930:intron 30.0%
!!! TAGTTTTGTTGTCAATGAAC+GGG + chr4_2:71264663-71264682 None:intergenic 30.0%
TGACAACAAAACTAAGAAGA+AGG - chr4_2:71264669-71264688 Msa0619930:intron 30.0%
!! TAGTTTGTTTGAGATGTTGA+TGG - chr4_2:71264743-71264762 Msa0619930:intron 30.0%
!! GATTAGTTTAATAGCTATCC+TGG + chr4_2:71264909-71264928 None:intergenic 30.0%
! ACTTGTTACAATGAGTTTCT+TGG - chr4_2:71265192-71265211 Msa0619930:intron 30.0%
CTTGTTACAATGAGTTTCTT+GGG - chr4_2:71265193-71265212 Msa0619930:intron 30.0%
AGACATTCATTTGTTCCAAA+TGG - chr4_2:71263520-71263539 Msa0619930:three_prime_UTR 30.0%
TTGTCTTGTGCAATTTGATT+AGG + chr4_2:71263568-71263587 None:intergenic 30.0%
TAATCAAATTGCACAAGACA+AGG - chr4_2:71263567-71263586 Msa0619930:three_prime_UTR 30.0%
! TGGAAGACATTTTCAAAAGA+AGG - chr4_2:71263642-71263661 Msa0619930:three_prime_UTR 30.0%
! AGACATTTTCAAAAGAAGGA+TGG - chr4_2:71263646-71263665 Msa0619930:three_prime_UTR 30.0%
TGTTAACTAGATATAGGGAT+AGG + chr4_2:71263731-71263750 None:intergenic 30.0%
!! TGAGAGATTTTAGCCATTAT+GGG + chr4_2:71263835-71263854 None:intergenic 30.0%
GATCTCTATTTGAGTATTAG+AGG - chr4_2:71263960-71263979 Msa0619930:exon 30.0%
! AAAAAGTAAATGGTAGCGAA+GGG + chr4_2:71264019-71264038 None:intergenic 30.0%
! AAAAAAGTAAATGGTAGCGA+AGG + chr4_2:71264020-71264039 None:intergenic 30.0%
! AGCAATTTTCTTTGTGATAC+AGG - chr4_2:71264240-71264259 Msa0619930:CDS 30.0%
! GCAATTTTCTTTGTGATACA+GGG - chr4_2:71264241-71264260 Msa0619930:CDS 30.0%
TTCTTGATAAACTATGTGCA+AGG - chr4_2:71264277-71264296 Msa0619930:CDS 30.0%
ATAACGATATACCTGCAAAA+TGG + chr4_2:71264479-71264498 None:intergenic 30.0%
ATTGTTAATTTCTTGGATGC+AGG - chr4_2:71264558-71264577 Msa0619930:intron 30.0%
! CGTACATTTTTATGAAAGTG+TGG - chr4_2:71264626-71264645 Msa0619930:intron 30.0%
!!! TAGTTTTGTTGTCAATGAAC+GGG + chr4_2:71264663-71264682 None:intergenic 30.0%
TGACAACAAAACTAAGAAGA+AGG - chr4_2:71264669-71264688 Msa0619930:intron 30.0%
!! TAGTTTGTTTGAGATGTTGA+TGG - chr4_2:71264743-71264762 Msa0619930:intron 30.0%
!! GATTAGTTTAATAGCTATCC+TGG + chr4_2:71264909-71264928 None:intergenic 30.0%
! ACTTGTTACAATGAGTTTCT+TGG - chr4_2:71265192-71265211 Msa0619930:intron 30.0%
CTTGTTACAATGAGTTTCTT+GGG - chr4_2:71265193-71265212 Msa0619930:intron 30.0%
TCGTGATTTAGATGTAGAGA+AGG - chr4_2:71263465-71263484 Msa0619930:three_prime_UTR 35.0%
TGTTCCTCAAGTACTTGAAA+TGG - chr4_2:71263497-71263516 Msa0619930:three_prime_UTR 35.0%
GATAGAGATATGGAACCATT+TGG + chr4_2:71263538-71263557 None:intergenic 35.0%
!! AGAGATTTTAGCCATTATGG+GGG + chr4_2:71263833-71263852 None:intergenic 35.0%
!! GAGAGATTTTAGCCATTATG+GGG + chr4_2:71263834-71263853 None:intergenic 35.0%
!! CTGAGAGATTTTAGCCATTA+TGG + chr4_2:71263836-71263855 None:intergenic 35.0%
! AACTAGTCTCTTAATGCCAA+GGG + chr4_2:71263878-71263897 None:intergenic 35.0%
! TTAGAGGGTTAGTATACCAT+TGG - chr4_2:71263976-71263995 Msa0619930:CDS 35.0%
TCATAATCCTTCGTTTCGAT+CGG + chr4_2:71264083-71264102 None:intergenic 35.0%
CAATATTACATACTAGCACC+AGG + chr4_2:71264159-71264178 None:intergenic 35.0%
! CTGGTGCTAGTATGTAATAT+TGG - chr4_2:71264157-71264176 Msa0619930:intron 35.0%
TATAGCAGAACTCAAAGGAT+GGG - chr4_2:71264411-71264430 Msa0619930:CDS 35.0%
ATATACCTGCAAAATGGAGA+GGG + chr4_2:71264473-71264492 None:intergenic 35.0%
TGTGTGAATTGTGAAGTAGT+TGG - chr4_2:71264512-71264531 Msa0619930:intron 35.0%
GATTACTACCCTGAAAGATT+GGG - chr4_2:71264580-71264599 Msa0619930:intron 35.0%
ATTACTACCCTGAAAGATTG+GGG - chr4_2:71264581-71264600 Msa0619930:intron 35.0%
TTCCACAAATACTATCTGCA+AGG + chr4_2:71264797-71264816 None:intergenic 35.0%
TATAGACGAAAGTCAACTTC+CGG - chr4_2:71264849-71264868 Msa0619930:intron 35.0%
TTTAATAGCTATCCTGGATG+GGG + chr4_2:71264903-71264922 None:intergenic 35.0%
GTTTAATAGCTATCCTGGAT+GGG + chr4_2:71264904-71264923 None:intergenic 35.0%
AGTTTAATAGCTATCCTGGA+TGG + chr4_2:71264905-71264924 None:intergenic 35.0%
GCTATTAAACTAATCAGCAC+TGG - chr4_2:71264914-71264933 Msa0619930:intron 35.0%
!! TAATCAGCACTGGCAAATTA+AGG - chr4_2:71264924-71264943 Msa0619930:intron 35.0%
CTATTAGACTGATAGTTCAG+TGG - chr4_2:71265030-71265049 Msa0619930:intron 35.0%
TCGTGATTTAGATGTAGAGA+AGG - chr4_2:71263465-71263484 Msa0619930:three_prime_UTR 35.0%
TGTTCCTCAAGTACTTGAAA+TGG - chr4_2:71263497-71263516 Msa0619930:three_prime_UTR 35.0%
GATAGAGATATGGAACCATT+TGG + chr4_2:71263538-71263557 None:intergenic 35.0%
!! AGAGATTTTAGCCATTATGG+GGG + chr4_2:71263833-71263852 None:intergenic 35.0%
!! GAGAGATTTTAGCCATTATG+GGG + chr4_2:71263834-71263853 None:intergenic 35.0%
!! CTGAGAGATTTTAGCCATTA+TGG + chr4_2:71263836-71263855 None:intergenic 35.0%
! AACTAGTCTCTTAATGCCAA+GGG + chr4_2:71263878-71263897 None:intergenic 35.0%
! TTAGAGGGTTAGTATACCAT+TGG - chr4_2:71263976-71263995 Msa0619930:CDS 35.0%
TCATAATCCTTCGTTTCGAT+CGG + chr4_2:71264083-71264102 None:intergenic 35.0%
CAATATTACATACTAGCACC+AGG + chr4_2:71264159-71264178 None:intergenic 35.0%
! CTGGTGCTAGTATGTAATAT+TGG - chr4_2:71264157-71264176 Msa0619930:intron 35.0%
TATAGCAGAACTCAAAGGAT+GGG - chr4_2:71264411-71264430 Msa0619930:CDS 35.0%
ATATACCTGCAAAATGGAGA+GGG + chr4_2:71264473-71264492 None:intergenic 35.0%
TGTGTGAATTGTGAAGTAGT+TGG - chr4_2:71264512-71264531 Msa0619930:intron 35.0%
GATTACTACCCTGAAAGATT+GGG - chr4_2:71264580-71264599 Msa0619930:intron 35.0%
ATTACTACCCTGAAAGATTG+GGG - chr4_2:71264581-71264600 Msa0619930:intron 35.0%
TTCCACAAATACTATCTGCA+AGG + chr4_2:71264797-71264816 None:intergenic 35.0%
TATAGACGAAAGTCAACTTC+CGG - chr4_2:71264849-71264868 Msa0619930:intron 35.0%
TTTAATAGCTATCCTGGATG+GGG + chr4_2:71264903-71264922 None:intergenic 35.0%
GTTTAATAGCTATCCTGGAT+GGG + chr4_2:71264904-71264923 None:intergenic 35.0%
AGTTTAATAGCTATCCTGGA+TGG + chr4_2:71264905-71264924 None:intergenic 35.0%
GCTATTAAACTAATCAGCAC+TGG - chr4_2:71264914-71264933 Msa0619930:intron 35.0%
!! TAATCAGCACTGGCAAATTA+AGG - chr4_2:71264924-71264943 Msa0619930:intron 35.0%
CTATTAGACTGATAGTTCAG+TGG - chr4_2:71265030-71265049 Msa0619930:intron 35.0%
! GTCTCCATTTCAAGTACTTG+AGG + chr4_2:71263504-71263523 None:intergenic 40.0%
TGGTTCCATATCTCTATCAC+AGG - chr4_2:71263540-71263559 Msa0619930:three_prime_UTR 40.0%
AGGAACCTGTGATAGAGATA+TGG + chr4_2:71263548-71263567 None:intergenic 40.0%
ACCAATCTTGTCATGTCCTT+GGG + chr4_2:71263599-71263618 None:intergenic 40.0%
CGACCAATACTTCTTGTCTT+TGG - chr4_2:71263619-71263638 Msa0619930:three_prime_UTR 40.0%
! CCACCAAAGACAAGAAGTAT+TGG + chr4_2:71263625-71263644 None:intergenic 40.0%
CCAATACTTCTTGTCTTTGG+TGG - chr4_2:71263622-71263641 Msa0619930:three_prime_UTR 40.0%
GCAATTGTGCTAACTTCTGT+TGG + chr4_2:71263772-71263791 None:intergenic 40.0%
! CAACTAGTCTCTTAATGCCA+AGG + chr4_2:71263879-71263898 None:intergenic 40.0%
! ACAAATTTTTCTTCCCCAGG+TGG + chr4_2:71264388-71264407 None:intergenic 40.0%
! CCAACAAATTTTTCTTCCCC+AGG + chr4_2:71264391-71264410 None:intergenic 40.0%
CCTGGGGAAGAAAAATTTGT+TGG - chr4_2:71264388-71264407 Msa0619930:intron 40.0%
GTTGGTATAGCAGAACTCAA+AGG - chr4_2:71264406-71264425 Msa0619930:CDS 40.0%
GTATAGCAGAACTCAAAGGA+TGG - chr4_2:71264410-71264429 Msa0619930:CDS 40.0%
ATAGCAGAACTCAAAGGATG+GGG - chr4_2:71264412-71264431 Msa0619930:CDS 40.0%
TACTCAAATAGCGATTTGCG+TGG - chr4_2:71264436-71264455 Msa0619930:CDS 40.0%
GATATACCTGCAAAATGGAG+AGG + chr4_2:71264474-71264493 None:intergenic 40.0%
GGATTACTACCCTGAAAGAT+TGG - chr4_2:71264579-71264598 Msa0619930:intron 40.0%
ACAACTTCCCCAATCTTTCA+GGG + chr4_2:71264591-71264610 None:intergenic 40.0%
AACAACTTCCCCAATCTTTC+AGG + chr4_2:71264592-71264611 None:intergenic 40.0%
TCATAAAAATGTACGGTGCG+TGG + chr4_2:71264621-71264640 None:intergenic 40.0%
CTCCTTGCAGATAGTATTTG+TGG - chr4_2:71264792-71264811 Msa0619930:intron 40.0%
AGTCAACTTCCGGAGATATA+CGG - chr4_2:71264859-71264878 Msa0619930:intron 40.0%
CCATGACTGATCAACATCAA+TGG + chr4_2:71265070-71265089 None:intergenic 40.0%
CCATTGATGTTGATCAGTCA+TGG - chr4_2:71265067-71265086 Msa0619930:intron 40.0%
! CTAAGCAATTTTCTCGCAAC+TGG + chr4_2:71265404-71265423 None:intergenic 40.0%
! GTCTCCATTTCAAGTACTTG+AGG + chr4_2:71263504-71263523 None:intergenic 40.0%
TGGTTCCATATCTCTATCAC+AGG - chr4_2:71263540-71263559 Msa0619930:three_prime_UTR 40.0%
AGGAACCTGTGATAGAGATA+TGG + chr4_2:71263548-71263567 None:intergenic 40.0%
ACCAATCTTGTCATGTCCTT+GGG + chr4_2:71263599-71263618 None:intergenic 40.0%
CGACCAATACTTCTTGTCTT+TGG - chr4_2:71263619-71263638 Msa0619930:three_prime_UTR 40.0%
! CCACCAAAGACAAGAAGTAT+TGG + chr4_2:71263625-71263644 None:intergenic 40.0%
CCAATACTTCTTGTCTTTGG+TGG - chr4_2:71263622-71263641 Msa0619930:three_prime_UTR 40.0%
GCAATTGTGCTAACTTCTGT+TGG + chr4_2:71263772-71263791 None:intergenic 40.0%
! CAACTAGTCTCTTAATGCCA+AGG + chr4_2:71263879-71263898 None:intergenic 40.0%
! ACAAATTTTTCTTCCCCAGG+TGG + chr4_2:71264388-71264407 None:intergenic 40.0%
! CCAACAAATTTTTCTTCCCC+AGG + chr4_2:71264391-71264410 None:intergenic 40.0%
CCTGGGGAAGAAAAATTTGT+TGG - chr4_2:71264388-71264407 Msa0619930:intron 40.0%
GTTGGTATAGCAGAACTCAA+AGG - chr4_2:71264406-71264425 Msa0619930:CDS 40.0%
GTATAGCAGAACTCAAAGGA+TGG - chr4_2:71264410-71264429 Msa0619930:CDS 40.0%
ATAGCAGAACTCAAAGGATG+GGG - chr4_2:71264412-71264431 Msa0619930:CDS 40.0%
TACTCAAATAGCGATTTGCG+TGG - chr4_2:71264436-71264455 Msa0619930:CDS 40.0%
GATATACCTGCAAAATGGAG+AGG + chr4_2:71264474-71264493 None:intergenic 40.0%
GGATTACTACCCTGAAAGAT+TGG - chr4_2:71264579-71264598 Msa0619930:intron 40.0%
ACAACTTCCCCAATCTTTCA+GGG + chr4_2:71264591-71264610 None:intergenic 40.0%
AACAACTTCCCCAATCTTTC+AGG + chr4_2:71264592-71264611 None:intergenic 40.0%
TCATAAAAATGTACGGTGCG+TGG + chr4_2:71264621-71264640 None:intergenic 40.0%
CTCCTTGCAGATAGTATTTG+TGG - chr4_2:71264792-71264811 Msa0619930:intron 40.0%
AGTCAACTTCCGGAGATATA+CGG - chr4_2:71264859-71264878 Msa0619930:intron 40.0%
CCATGACTGATCAACATCAA+TGG + chr4_2:71265070-71265089 None:intergenic 40.0%
CCATTGATGTTGATCAGTCA+TGG - chr4_2:71265067-71265086 Msa0619930:intron 40.0%
! CTAAGCAATTTTCTCGCAAC+TGG + chr4_2:71265404-71265423 None:intergenic 40.0%
GACCAATCTTGTCATGTCCT+TGG + chr4_2:71263600-71263619 None:intergenic 45.0%
TGATCAACCGATCGAAACGA+AGG - chr4_2:71264073-71264092 Msa0619930:intron 45.0%
AGCGATTTGCGTGGATACAT+TGG - chr4_2:71264445-71264464 Msa0619930:CDS 45.0%
TAGTTGGAAGCTTAGCACTC+AGG - chr4_2:71264528-71264547 Msa0619930:intron 45.0%
AGTTGGAAGCTTAGCACTCA+GGG - chr4_2:71264529-71264548 Msa0619930:intron 45.0%
AGTTTGCCACCGTATATCTC+CGG + chr4_2:71264871-71264890 None:intergenic 45.0%
ATGATGTGTGACTGTGAGTG+CGG - chr4_2:71265296-71265315 Msa0619930:CDS 45.0%
! AACAGCTCCTTCTCTTTTGG+TGG - chr4_2:71265428-71265447 Msa0619930:CDS 45.0%
!!! CTTCTCTTTTGGTGGTGGTT+GGG - chr4_2:71265436-71265455 Msa0619930:exon 45.0%
!!! TTCTCTTTTGGTGGTGGTTG+GGG - chr4_2:71265437-71265456 Msa0619930:exon 45.0%
GACCAATCTTGTCATGTCCT+TGG + chr4_2:71263600-71263619 None:intergenic 45.0%
TGATCAACCGATCGAAACGA+AGG - chr4_2:71264073-71264092 Msa0619930:intron 45.0%
AGCGATTTGCGTGGATACAT+TGG - chr4_2:71264445-71264464 Msa0619930:CDS 45.0%
TAGTTGGAAGCTTAGCACTC+AGG - chr4_2:71264528-71264547 Msa0619930:intron 45.0%
AGTTGGAAGCTTAGCACTCA+GGG - chr4_2:71264529-71264548 Msa0619930:intron 45.0%
AGTTTGCCACCGTATATCTC+CGG + chr4_2:71264871-71264890 None:intergenic 45.0%
ATGATGTGTGACTGTGAGTG+CGG - chr4_2:71265296-71265315 Msa0619930:CDS 45.0%
! AACAGCTCCTTCTCTTTTGG+TGG - chr4_2:71265428-71265447 Msa0619930:CDS 45.0%
!!! CTTCTCTTTTGGTGGTGGTT+GGG - chr4_2:71265436-71265455 Msa0619930:exon 45.0%
!!! TTCTCTTTTGGTGGTGGTTG+GGG - chr4_2:71265437-71265456 Msa0619930:exon 45.0%
GCCCAAGGACATGACAAGAT+TGG - chr4_2:71263595-71263614 Msa0619930:three_prime_UTR 50.0%
GCCATTATGGGGGATTCACA+GGG + chr4_2:71263823-71263842 None:intergenic 50.0%
AGCCATTATGGGGGATTCAC+AGG + chr4_2:71263824-71263843 None:intergenic 50.0%
TCTCTCAGCATTTCTGCTCG+AGG - chr4_2:71263848-71263867 Msa0619930:three_prime_UTR 50.0%
! TATACCATTGGTGCCCCACT+CGG - chr4_2:71263988-71264007 Msa0619930:CDS 50.0%
TGATGTATCAGCATGCCACC+TGG - chr4_2:71264370-71264389 Msa0619930:intron 50.0%
GATGTATCAGCATGCCACCT+GGG - chr4_2:71264371-71264390 Msa0619930:intron 50.0%
ATGTATCAGCATGCCACCTG+GGG - chr4_2:71264372-71264391 Msa0619930:intron 50.0%
CAACTTCCGGAGATATACGG+TGG - chr4_2:71264862-71264881 Msa0619930:intron 50.0%
ACTGCAATTAGTCCCCATCC+AGG - chr4_2:71264888-71264907 Msa0619930:intron 50.0%
! CGCAACAGCTCCTTCTCTTT+TGG - chr4_2:71265425-71265444 Msa0619930:CDS 50.0%
! AGCTCCTTCTCTTTTGGTGG+TGG - chr4_2:71265431-71265450 Msa0619930:exon 50.0%
CCAACCACCACCAAAAGAGA+AGG + chr4_2:71265438-71265457 None:intergenic 50.0%
!!! CCTTCTCTTTTGGTGGTGGT+TGG - chr4_2:71265435-71265454 Msa0619930:exon 50.0%
GCCCAAGGACATGACAAGAT+TGG - chr4_2:71263595-71263614 Msa0619930:three_prime_UTR 50.0%
GCCATTATGGGGGATTCACA+GGG + chr4_2:71263823-71263842 None:intergenic 50.0%
AGCCATTATGGGGGATTCAC+AGG + chr4_2:71263824-71263843 None:intergenic 50.0%
TCTCTCAGCATTTCTGCTCG+AGG - chr4_2:71263848-71263867 Msa0619930:three_prime_UTR 50.0%
! TATACCATTGGTGCCCCACT+CGG - chr4_2:71263988-71264007 Msa0619930:CDS 50.0%
TGATGTATCAGCATGCCACC+TGG - chr4_2:71264370-71264389 Msa0619930:intron 50.0%
GATGTATCAGCATGCCACCT+GGG - chr4_2:71264371-71264390 Msa0619930:intron 50.0%
ATGTATCAGCATGCCACCTG+GGG - chr4_2:71264372-71264391 Msa0619930:intron 50.0%
CAACTTCCGGAGATATACGG+TGG - chr4_2:71264862-71264881 Msa0619930:intron 50.0%
ACTGCAATTAGTCCCCATCC+AGG - chr4_2:71264888-71264907 Msa0619930:intron 50.0%
! CGCAACAGCTCCTTCTCTTT+TGG - chr4_2:71265425-71265444 Msa0619930:CDS 50.0%
! AGCTCCTTCTCTTTTGGTGG+TGG - chr4_2:71265431-71265450 Msa0619930:exon 50.0%
CCAACCACCACCAAAAGAGA+AGG + chr4_2:71265438-71265457 None:intergenic 50.0%
!!! CCTTCTCTTTTGGTGGTGGT+TGG - chr4_2:71265435-71265454 Msa0619930:exon 50.0%
CTTGTCATGTCCTTGGGCGA+AGG + chr4_2:71263593-71263612 None:intergenic 55.0%
ATGGGGGATTCACAGGGCAT+TGG + chr4_2:71263817-71263836 None:intergenic 55.0%
GCCCTGTGAATCCCCCATAA+TGG - chr4_2:71263819-71263838 Msa0619930:three_prime_UTR 55.0%
TTCTGCTCGAGGAGATCCCT+TGG - chr4_2:71263859-71263878 Msa0619930:three_prime_UTR 55.0%
! ATACCATTGGTGCCCCACTC+GGG - chr4_2:71263989-71264008 Msa0619930:CDS 55.0%
! TGGTGCCCTCTCCATTTTGC+AGG - chr4_2:71264465-71264484 Msa0619930:CDS 55.0%
!! TGGTGGTGGTTGGGGTTTGA+AGG - chr4_2:71265445-71265464 Msa0619930:exon 55.0%
CTTGTCATGTCCTTGGGCGA+AGG + chr4_2:71263593-71263612 None:intergenic 55.0%
ATGGGGGATTCACAGGGCAT+TGG + chr4_2:71263817-71263836 None:intergenic 55.0%
GCCCTGTGAATCCCCCATAA+TGG - chr4_2:71263819-71263838 Msa0619930:three_prime_UTR 55.0%
TTCTGCTCGAGGAGATCCCT+TGG - chr4_2:71263859-71263878 Msa0619930:three_prime_UTR 55.0%
! ATACCATTGGTGCCCCACTC+GGG - chr4_2:71263989-71264008 Msa0619930:CDS 55.0%
! TGGTGCCCTCTCCATTTTGC+AGG - chr4_2:71264465-71264484 Msa0619930:CDS 55.0%
CAAGACAAGGCCTTCGCCCA+AGG - chr4_2:71263580-71263599 Msa0619930:three_prime_UTR 60.0%
CAAGACAAGGCCTTCGCCCA+AGG - chr4_2:71263580-71263599 Msa0619930:three_prime_UTR 60.0%
!! AGCGAAGGGAGCACCCGAGT+GGG + chr4_2:71264005-71264024 None:intergenic 65.0%
!! TAGCGAAGGGAGCACCCGAG+TGG + chr4_2:71264006-71264025 None:intergenic 65.0%
!! AGCGAAGGGAGCACCCGAGT+GGG + chr4_2:71264005-71264024 None:intergenic 65.0%
!! TAGCGAAGGGAGCACCCGAG+TGG + chr4_2:71264006-71264025 None:intergenic 65.0%
! GCACCCGAGTGGGGCACCAA+TGG + chr4_2:71263995-71264014 None:intergenic 70.0%
!! GCGAAGGGAGCACCCGAGTG+GGG + chr4_2:71264004-71264023 None:intergenic 70.0%
! GCACCCGAGTGGGGCACCAA+TGG + chr4_2:71263995-71264014 None:intergenic 70.0%
!! GCGAAGGGAGCACCCGAGTG+GGG + chr4_2:71264004-71264023 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr4_2 gene 71263425 71265464 71263425 ID=Msa0619930;Name=Msa0619930
chr4_2 mRNA 71263425 71265464 71263425 ID=Msa0619930-mRNA-1;Parent=Msa0619930;Name=Msa0619930-mRNA-1;_AED=0.09;_eAED=0.09;_QI=17|1|1|1|1|1|5|543|205
chr4_2 exon 71263425 71264087 71263425 ID=Msa0619930-mRNA-1:exon:21024;Parent=Msa0619930-mRNA-1
chr4_2 exon 71264199 71264309 71264199 ID=Msa0619930-mRNA-1:exon:21023;Parent=Msa0619930-mRNA-1
chr4_2 exon 71264403 71264508 71264403 ID=Msa0619930-mRNA-1:exon:21022;Parent=Msa0619930-mRNA-1
chr4_2 exon 71264591 71264627 71264591 ID=Msa0619930-mRNA-1:exon:21021;Parent=Msa0619930-mRNA-1
chr4_2 exon 71265204 71265464 71265204 ID=Msa0619930-mRNA-1:exon:21020;Parent=Msa0619930-mRNA-1
chr4_2 five_prime_UTR 71265448 71265464 71265448 ID=Msa0619930-mRNA-1:five_prime_utr;Parent=Msa0619930-mRNA-1
chr4_2 CDS 71265204 71265447 71265204 ID=Msa0619930-mRNA-1:cds;Parent=Msa0619930-mRNA-1
chr4_2 CDS 71264591 71264627 71264591 ID=Msa0619930-mRNA-1:cds;Parent=Msa0619930-mRNA-1
chr4_2 CDS 71264403 71264508 71264403 ID=Msa0619930-mRNA-1:cds;Parent=Msa0619930-mRNA-1
chr4_2 CDS 71264199 71264309 71264199 ID=Msa0619930-mRNA-1:cds;Parent=Msa0619930-mRNA-1
chr4_2 CDS 71263968 71264087 71263968 ID=Msa0619930-mRNA-1:cds;Parent=Msa0619930-mRNA-1
chr4_2 three_prime_UTR 71263425 71263967 71263425 ID=Msa0619930-mRNA-1:three_prime_utr;Parent=Msa0619930-mRNA-1
Gene Sequence

>Msa0619930

ATGATCAGAAGATTTCTACGTGCTCGTGATTTAGATGTAGAGAAGGCTTCAGCAATGTTCCTCAAGTACTTGAAATGGAGACATTCATTTGTTCCAAATGGTTCCATATCTCTATCACAGGTTCCTAATCAAATTGCACAAGACAAGGCCTTCGCCCAAGGACATGACAAGATTGGTCGACCAATACTTCTTGTCTTTGGTGGAAGACATTTTCAAAAGAAGGATGGTCTAGATGAATTCAAACGGTTTGCAGTTTATATTCTTGATAAACTATGTGCAAGCATGCCACCTGGGGAAGAAAAATTTGTTGGTATAGCAGAACTCAAAGGATGGGGTTACTCAAATAGCGATTTGCGTGGATACATTGGTGCCCTCTCCATTTTGCAGGATTACTACCCTGAAAGATTGGGGAAGTTGTTTATTCTCCACGCACCGTACATTTTTATGAAAGTGTGGAAAATAGTTTACCCGTTCATTGACAACAAAACTAAGAAGAAGATAGTATTTGTGGAAAACAATAAGCTGAAATCAACACTTTTAGAAGATATAGACGAAAGTCAACTTCCGGAGATATACGGTGGCAAACTGCAATTAGTCCCCATCCAGGATAGCTATTAA

Protein sequence

>Msa0619930

MIRRFLRARDLDVEKASAMFLKYLKWRHSFVPNGSISLSQVPNQIAQDKAFAQGHDKIGRPILLVFGGRHFQKKDGLDEFKRFAVYILDKLCASMPPGEEKFVGIAELKGWGYSNSDLRGYIGALSILQDYYPERLGKLFILHAPYIFMKVWKIVYPFIDNKTKKKIVFVENNKLKSTLLEDIDESQLPEIYGGKLQLVPIQDSY*