Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0117460 | XP_013467530.1 | 97.329 | 337 | 9 | 0 | 1 | 337 | 1 | 337 | 0.0 | 685 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0117460 | sp|Q8LBZ4|OTU4_ARATH | 60.515 | 233 | 88 | 3 | 109 | 337 | 85 | 317 | 6.73e-96 | 290 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0117460 | A0A072VIC0 | 97.329 | 337 | 9 | 0 | 1 | 337 | 1 | 337 | 0.0 | 685 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0000220 | Msa0117460 | 0.805904 | 1.065895e-49 | -8.615850e-47 |
| Msa0001540 | Msa0117460 | 0.806230 | 9.099321e-50 | -8.615850e-47 |
| Msa0002060 | Msa0117460 | 0.800885 | 1.168346e-48 | -8.615850e-47 |
| Msa0007930 | Msa0117460 | 0.812100 | 5.024521e-51 | -8.615850e-47 |
| Msa0009210 | Msa0117460 | 0.832438 | 9.450443e-56 | -8.615850e-47 |
| Msa0012460 | Msa0117460 | 0.804380 | 2.220921e-49 | -8.615850e-47 |
| Msa0016110 | Msa0117460 | 0.826409 | 2.756716e-54 | -8.615850e-47 |
| Msa0016160 | Msa0117460 | 0.808420 | 3.124191e-50 | -8.615850e-47 |
| Msa0025830 | Msa0117460 | 0.807817 | 4.198587e-50 | -8.615850e-47 |
| Msa0034320 | Msa0117460 | 0.826975 | 2.019954e-54 | -8.615850e-47 |
| Msa0035090 | Msa0117460 | 0.805289 | 1.434239e-49 | -8.615850e-47 |
| Msa0046800 | Msa0117460 | 0.806967 | 6.359762e-50 | -8.615850e-47 |
| Msa0049990 | Msa0117460 | 0.824686 | 7.055660e-54 | -8.615850e-47 |
| Msa0058140 | Msa0117460 | 0.841517 | 4.529163e-58 | -8.615850e-47 |
| Msa0065390 | Msa0117460 | 0.816650 | 4.958348e-52 | -8.615850e-47 |
| Msa0073350 | Msa0117460 | 0.805459 | 1.321128e-49 | -8.615850e-47 |
| Msa0073390 | Msa0117460 | 0.804553 | 2.043962e-49 | -8.615850e-47 |
| Msa0077910 | Msa0117460 | 0.800536 | 1.376423e-48 | -8.615850e-47 |
| Msa0081300 | Msa0117460 | 0.812905 | 3.350457e-51 | -8.615850e-47 |
| Msa0092750 | Msa0117460 | 0.811104 | 8.271725e-51 | -8.615850e-47 |
| Msa0096830 | Msa0117460 | 0.801478 | 8.835171e-49 | -8.615850e-47 |
| Msa0102290 | Msa0117460 | 0.804868 | 1.756838e-49 | -8.615850e-47 |
| Msa0109870 | Msa0117460 | 0.805273 | 1.445586e-49 | -8.615850e-47 |
| Msa0110710 | Msa0117460 | 0.813489 | 2.494770e-51 | -8.615850e-47 |
| Msa0112290 | Msa0117460 | 0.810642 | 1.041473e-50 | -8.615850e-47 |
| Msa0117460 | Msa0122210 | 0.813472 | 2.515349e-51 | -8.615850e-47 |
| Msa0117460 | Msa0130120 | 0.805090 | 1.578631e-49 | -8.615850e-47 |
| Msa0117460 | Msa0144340 | 0.809696 | 1.665838e-50 | -8.615850e-47 |
| Msa0117460 | Msa0144510 | 0.803064 | 4.166754e-49 | -8.615850e-47 |
| Msa0117460 | Msa0149070 | 0.815444 | 9.214740e-52 | -8.615850e-47 |
| Msa0117460 | Msa0152380 | 0.828556 | 8.417354e-55 | -8.615850e-47 |
| Msa0117460 | Msa0155540 | 0.804008 | 2.654188e-49 | -8.615850e-47 |
| Msa0117460 | Msa0155550 | 0.814309 | 1.644797e-51 | -8.615850e-47 |
| Msa0117460 | Msa0156260 | 0.805678 | 1.188507e-49 | -8.615850e-47 |
| Msa0117460 | Msa0160120 | 0.810520 | 1.106380e-50 | -8.615850e-47 |
| Msa0117460 | Msa0168900 | 0.812783 | 3.563232e-51 | -8.615850e-47 |
| Msa0117460 | Msa0170440 | 0.800874 | 1.174593e-48 | -8.615850e-47 |
| Msa0117460 | Msa0173610 | 0.824019 | 1.012737e-53 | -8.615850e-47 |
| Msa0117460 | Msa0175280 | 0.815545 | 8.750261e-52 | -8.615850e-47 |
| Msa0117460 | Msa0181010 | 0.801459 | 8.917051e-49 | -8.615850e-47 |
| Msa0117460 | Msa0181380 | 0.802920 | 4.461478e-49 | -8.615850e-47 |
| Msa0117460 | Msa0182610 | 0.820121 | 8.109911e-53 | -8.615850e-47 |
| Msa0117460 | Msa0185550 | 0.810283 | 1.244960e-50 | -8.615850e-47 |
| Msa0117460 | Msa0186750 | 0.807706 | 4.433707e-50 | -8.615850e-47 |
| Msa0117460 | Msa0191180 | 0.809719 | 1.646284e-50 | -8.615850e-47 |
| Msa0117460 | Msa0202630 | 0.826256 | 2.997054e-54 | -8.615850e-47 |
| Msa0117460 | Msa0206970 | 0.818169 | 2.255807e-52 | -8.615850e-47 |
| Msa0117460 | Msa0215980 | 0.812026 | 5.215116e-51 | -8.615850e-47 |
| Msa0117460 | Msa0216900 | 0.800993 | 1.110308e-48 | -8.615850e-47 |
| Msa0117460 | Msa0219550 | 0.843811 | 1.113709e-58 | -8.615850e-47 |
| Msa0117460 | Msa0244320 | 0.807452 | 5.021105e-50 | -8.615850e-47 |
| Msa0117460 | Msa0247310 | 0.829622 | 4.644363e-55 | -8.615850e-47 |
| Msa0117460 | Msa0251110 | 0.822298 | 2.553240e-53 | -8.615850e-47 |
| Msa0117460 | Msa0253410 | 0.810949 | 8.936175e-51 | -8.615850e-47 |
| Msa0117460 | Msa0261440 | 0.824449 | 8.021616e-54 | -8.615850e-47 |
| Msa0117460 | Msa0266100 | 0.811746 | 5.999401e-51 | -8.615850e-47 |
| Msa0117460 | Msa0269830 | 0.829556 | 4.818074e-55 | -8.615850e-47 |
| Msa0117460 | Msa0280120 | 0.825997 | 3.453827e-54 | -8.615850e-47 |
| Msa0117460 | Msa0280140 | 0.812782 | 3.565640e-51 | -8.615850e-47 |
| Msa0117460 | Msa0281310 | 0.823273 | 1.513470e-53 | -8.615850e-47 |
| Msa0117460 | Msa0284260 | 0.814291 | 1.660537e-51 | -8.615850e-47 |
| Msa0117460 | Msa0288360 | 0.801832 | 7.474140e-49 | -8.615850e-47 |
| Msa0117460 | Msa0290040 | 0.804392 | 2.207867e-49 | -8.615850e-47 |
| Msa0117460 | Msa0296100 | 0.817410 | 3.346174e-52 | -8.615850e-47 |
| Msa0117460 | Msa0297860 | 0.809442 | 1.887981e-50 | -8.615850e-47 |
| Msa0117460 | Msa0304870 | 0.821286 | 4.378137e-53 | -8.615850e-47 |
| Msa0117460 | Msa0307460 | 0.800091 | 1.695836e-48 | -8.615850e-47 |
| Msa0117460 | Msa0307750 | 0.801010 | 1.101790e-48 | -8.615850e-47 |
| Msa0117460 | Msa0308430 | 0.831924 | 1.266638e-55 | -8.615850e-47 |
| Msa0117460 | Msa0313550 | 0.840511 | 8.320216e-58 | -8.615850e-47 |
| Msa0117460 | Msa0321100 | 0.845567 | 3.747916e-59 | -8.615850e-47 |
| Msa0117460 | Msa0334780 | 0.813755 | 2.179510e-51 | -8.615850e-47 |
| Msa0117460 | Msa0341260 | 0.822201 | 2.688434e-53 | -8.615850e-47 |
| Msa0117460 | Msa0343920 | 0.815725 | 7.979220e-52 | -8.615850e-47 |
| Msa0117460 | Msa0353890 | 0.803589 | 3.243611e-49 | -8.615850e-47 |
| Msa0117460 | Msa0358230 | 0.820880 | 5.429842e-53 | -8.615850e-47 |
| Msa0117460 | Msa0362840 | 0.821234 | 4.499843e-53 | -8.615850e-47 |
| Msa0117460 | Msa0368430 | 0.807999 | 3.842127e-50 | -8.615850e-47 |
| Msa0117460 | Msa0369770 | 0.838818 | 2.293340e-57 | -8.615850e-47 |
| Msa0117460 | Msa0370180 | 0.816732 | 4.750763e-52 | -8.615850e-47 |
| Msa0117460 | Msa0377460 | 0.808904 | 2.462740e-50 | -8.615850e-47 |
| Msa0117460 | Msa0378000 | 0.801958 | 7.042857e-49 | -8.615850e-47 |
| Msa0117460 | Msa0379450 | 0.819889 | 9.163070e-53 | -8.615850e-47 |
| Msa0117460 | Msa0380440 | 0.808817 | 2.570434e-50 | -8.615850e-47 |
| Msa0117460 | Msa0392450 | 0.807840 | 4.152723e-50 | -8.615850e-47 |
| Msa0117460 | Msa0392480 | 0.801439 | 9.001212e-49 | -8.615850e-47 |
| Msa0117460 | Msa0399180 | 0.877144 | 7.951694e-69 | -8.615850e-47 |
| Msa0117460 | Msa0403670 | 0.811135 | 8.146374e-51 | -8.615850e-47 |
| Msa0117460 | Msa0404840 | 0.841062 | 5.965297e-58 | -8.615850e-47 |
| Msa0117460 | Msa0405040 | 0.804275 | 2.336092e-49 | -8.615850e-47 |
| Msa0117460 | Msa0417140 | 0.801681 | 8.028603e-49 | -8.615850e-47 |
| Msa0117460 | Msa0417630 | 0.824777 | 6.717643e-54 | -8.615850e-47 |
| Msa0117460 | Msa0429560 | 0.801377 | 9.265274e-49 | -8.615850e-47 |
| Msa0117460 | Msa0434630 | 0.810981 | 8.797107e-51 | -8.615850e-47 |
| Msa0117460 | Msa0436310 | 0.847376 | 1.202281e-59 | -8.615850e-47 |
| Msa0117460 | Msa0438990 | 0.842680 | 2.230390e-58 | -8.615850e-47 |
| Msa0117460 | Msa0444340 | 0.825816 | 3.813863e-54 | -8.615850e-47 |
| Msa0117460 | Msa0446480 | 0.808286 | 3.337314e-50 | -8.615850e-47 |
| Msa0117460 | Msa0448160 | 0.819816 | 9.521634e-53 | -8.615850e-47 |
| Msa0117460 | Msa0450860 | 0.810505 | 1.115052e-50 | -8.615850e-47 |
| Msa0117460 | Msa0455200 | 0.808041 | 3.762958e-50 | -8.615850e-47 |
| Msa0117460 | Msa0463580 | 0.801026 | 1.093333e-48 | -8.615850e-47 |
| Msa0117460 | Msa0463980 | 0.835210 | 1.915779e-56 | -8.615850e-47 |
| Msa0117460 | Msa0475130 | 0.803657 | 3.139925e-49 | -8.615850e-47 |
| Msa0117460 | Msa0476150 | 0.807704 | 4.439226e-50 | -8.615850e-47 |
| Msa0117460 | Msa0476180 | 0.807253 | 5.533096e-50 | -8.615850e-47 |
| Msa0117460 | Msa0486200 | 0.831502 | 1.609511e-55 | -8.615850e-47 |
| Msa0117460 | Msa0503120 | 0.808216 | 3.453387e-50 | -8.615850e-47 |
| Msa0117460 | Msa0504740 | 0.849393 | 3.328991e-60 | -8.615850e-47 |
| Msa0117460 | Msa0509530 | 0.840691 | 7.464161e-58 | -8.615850e-47 |
| Msa0117460 | Msa0517400 | 0.807491 | 4.926031e-50 | -8.615850e-47 |
| Msa0117460 | Msa0524020 | 0.829920 | 3.930158e-55 | -8.615850e-47 |
| Msa0117460 | Msa0526130 | 0.806317 | 8.721370e-50 | -8.615850e-47 |
| Msa0117460 | Msa0544780 | 0.800062 | 1.718870e-48 | -8.615850e-47 |
| Msa0117460 | Msa0545350 | 0.809885 | 1.516491e-50 | -8.615850e-47 |
| Msa0117460 | Msa0550720 | 0.859260 | 4.678063e-63 | -8.615850e-47 |
| Msa0117460 | Msa0555940 | 0.800864 | 1.179820e-48 | -8.615850e-47 |
| Msa0117460 | Msa0557770 | 0.825055 | 5.774044e-54 | -8.615850e-47 |
| Msa0117460 | Msa0567290 | 0.825717 | 4.025002e-54 | -8.615850e-47 |
| Msa0117460 | Msa0602670 | 0.826538 | 2.568119e-54 | -8.615850e-47 |
| Msa0117460 | Msa0619060 | 0.802360 | 5.822710e-49 | -8.615850e-47 |
| Msa0117460 | Msa0619170 | 0.814511 | 1.484028e-51 | -8.615850e-47 |
| Msa0117460 | Msa0623760 | 0.814913 | 1.209372e-51 | -8.615850e-47 |
| Msa0117460 | Msa0640880 | 0.803669 | 3.122638e-49 | -8.615850e-47 |
| Msa0117460 | Msa0646710 | 0.813506 | 2.473075e-51 | -8.615850e-47 |
| Msa0117460 | Msa0647110 | 0.863100 | 3.167151e-64 | -8.615850e-47 |
| Msa0117460 | Msa0647460 | 0.821441 | 4.031911e-53 | -8.615850e-47 |
| Msa0117460 | Msa0653090 | 0.816263 | 6.052100e-52 | -8.615850e-47 |
| Msa0117460 | Msa0685520 | 0.809909 | 1.498825e-50 | -8.615850e-47 |
| Msa0117460 | Msa0687540 | 0.816334 | 5.833672e-52 | -8.615850e-47 |
| Msa0117460 | Msa0695470 | 0.805705 | 1.173427e-49 | -8.615850e-47 |
| Msa0117460 | Msa0703760 | 0.812213 | 4.746463e-51 | -8.615850e-47 |
| Msa0117460 | Msa0704990 | 0.806376 | 8.475670e-50 | -8.615850e-47 |
| Msa0117460 | Msa0705030 | 0.814395 | 1.575116e-51 | -8.615850e-47 |
| Msa0117460 | Msa0712070 | 0.848210 | 7.085429e-60 | -8.615850e-47 |
| Msa0117460 | Msa0715180 | 0.815357 | 9.634574e-52 | -8.615850e-47 |
| Msa0117460 | Msa0716670 | 0.850230 | 1.941716e-60 | -8.615850e-47 |
| Msa0117460 | Msa0717090 | 0.826578 | 2.512361e-54 | -8.615850e-47 |
| Msa0117460 | Msa0720380 | 0.814600 | 1.418303e-51 | -8.615850e-47 |
| Msa0117460 | Msa0733110 | 0.845996 | 2.865749e-59 | -8.615850e-47 |
| Msa0117460 | Msa0734430 | 0.854896 | 9.066474e-62 | -8.615850e-47 |
| Msa0117460 | Msa0738970 | 0.809694 | 1.667413e-50 | -8.615850e-47 |
| Msa0117460 | Msa0742170 | 0.810013 | 1.423133e-50 | -8.615850e-47 |
| Msa0117460 | Msa0748890 | 0.831725 | 1.418269e-55 | -8.615850e-47 |
| Msa0117460 | Msa0753040 | 0.805608 | 1.229478e-49 | -8.615850e-47 |
| Msa0117460 | Msa0755570 | 0.821483 | 3.941438e-53 | -8.615850e-47 |
| Msa0117460 | Msa0760950 | 0.817979 | 2.490371e-52 | -8.615850e-47 |
| Msa0117460 | Msa0772400 | 0.802093 | 6.607642e-49 | -8.615850e-47 |
| Msa0117460 | Msa0786090 | 0.815244 | 1.021008e-51 | -8.615850e-47 |
| Msa0117460 | Msa0790830 | 0.800534 | 1.378051e-48 | -8.615850e-47 |
| Msa0117460 | Msa0803220 | 0.806045 | 9.953645e-50 | -8.615850e-47 |
| Msa0117460 | Msa0803930 | 0.806710 | 7.207768e-50 | -8.615850e-47 |
| Msa0117460 | Msa0804110 | 0.834253 | 3.335418e-56 | -8.615850e-47 |
| Msa0117460 | Msa0810370 | 0.802122 | 6.518040e-49 | -8.615850e-47 |
| Msa0117460 | Msa0811710 | 0.838237 | 3.239810e-57 | -8.615850e-47 |
| Msa0117460 | Msa0814760 | 0.841510 | 4.548882e-58 | -8.615850e-47 |
| Msa0117460 | Msa0819470 | 0.814819 | 1.268551e-51 | -8.615850e-47 |
| Msa0117460 | Msa0828810 | 0.810981 | 8.796804e-51 | -8.615850e-47 |
| Msa0117460 | Msa0830410 | 0.833152 | 6.283354e-56 | -8.615850e-47 |
| Msa0117460 | Msa0835030 | 0.819065 | 1.412195e-52 | -8.615850e-47 |
| Msa0117460 | Msa0837590 | 0.808730 | 2.682442e-50 | -8.615850e-47 |
| Msa0117460 | Msa0841980 | 0.821731 | 3.453930e-53 | -8.615850e-47 |
| Msa0117460 | Msa0842660 | 0.820419 | 6.926900e-53 | -8.615850e-47 |
| Msa0117460 | Msa0859390 | 0.810245 | 1.268848e-50 | -8.615850e-47 |
| Msa0117460 | Msa0862240 | 0.804399 | 2.201284e-49 | -8.615850e-47 |
| Msa0117460 | Msa0862300 | 0.811221 | 7.801868e-51 | -8.615850e-47 |
| Msa0117460 | Msa0881050 | 0.823640 | 1.242631e-53 | -8.615850e-47 |
| Msa0117460 | Msa0893390 | 0.803510 | 3.368824e-49 | -8.615850e-47 |
| Msa0117460 | Msa0900320 | 0.842161 | 3.061696e-58 | -8.615850e-47 |
| Msa0117460 | Msa0910650 | 0.843252 | 1.570711e-58 | -8.615850e-47 |
| Msa0117460 | Msa0926090 | 0.811721 | 6.075493e-51 | -8.615850e-47 |
| Msa0117460 | Msa0930160 | 0.806054 | 9.911223e-50 | -8.615850e-47 |
| Msa0117460 | Msa0959970 | 0.822044 | 2.924531e-53 | -8.615850e-47 |
| Msa0117460 | Msa0965960 | 0.809377 | 1.949667e-50 | -8.615850e-47 |
| Msa0117460 | Msa0967940 | 0.803545 | 3.312509e-49 | -8.615850e-47 |
| Msa0117460 | Msa0972730 | 0.815581 | 8.592018e-52 | -8.615850e-47 |
| Msa0117460 | Msa1002980 | 0.824112 | 9.629892e-54 | -8.615850e-47 |
| Msa0117460 | Msa1011240 | 0.810725 | 9.992525e-51 | -8.615850e-47 |
| Msa0117460 | Msa1013510 | 0.806575 | 7.695782e-50 | -8.615850e-47 |
| Msa0117460 | Msa1013560 | 0.804376 | 2.225279e-49 | -8.615850e-47 |
| Msa0117460 | Msa1032140 | 0.841937 | 3.509528e-58 | -8.615850e-47 |
| Msa0117460 | Msa1033120 | 0.862932 | 3.569421e-64 | -8.615850e-47 |
| Msa0117460 | Msa1035090 | 0.809757 | 1.615649e-50 | -8.615850e-47 |
| Msa0117460 | Msa1040010 | 0.800278 | 1.553139e-48 | -8.615850e-47 |
| Msa0117460 | Msa1040770 | 0.804690 | 1.913578e-49 | -8.615850e-47 |
| Msa0117460 | Msa1045440 | 0.820166 | 7.918314e-53 | -8.615850e-47 |
| Msa0117460 | Msa1054620 | 0.816656 | 4.940634e-52 | -8.615850e-47 |
| Msa0117460 | Msa1067430 | 0.852968 | 3.257300e-61 | -8.615850e-47 |
| Msa0117460 | Msa1072080 | 0.805740 | 1.153588e-49 | -8.615850e-47 |
| Msa0117460 | Msa1075120 | 0.804656 | 1.945711e-49 | -8.615850e-47 |
| Msa0117460 | Msa1076070 | 0.831405 | 1.700462e-55 | -8.615850e-47 |
| Msa0117460 | Msa1084150 | 0.818171 | 2.253398e-52 | -8.615850e-47 |
| Msa0117460 | Msa1090230 | 0.833848 | 4.213898e-56 | -8.615850e-47 |
| Msa0117460 | Msa1111670 | 0.803879 | 2.823943e-49 | -8.615850e-47 |
| Msa0117460 | Msa1127510 | 0.801676 | 8.047692e-49 | -8.615850e-47 |
| Msa0117460 | Msa1128350 | 0.837760 | 4.297182e-57 | -8.615850e-47 |
| Msa0117460 | Msa1149960 | 0.835560 | 1.562921e-56 | -8.615850e-47 |
| Msa0117460 | Msa1150170 | 0.803165 | 3.970488e-49 | -8.615850e-47 |
| Msa0117460 | Msa1166180 | 0.814443 | 1.536742e-51 | -8.615850e-47 |
| Msa0117460 | Msa1166280 | 0.815095 | 1.101643e-51 | -8.615850e-47 |
| Msa0117460 | Msa1177300 | 0.807372 | 5.219248e-50 | -8.615850e-47 |
| Msa0117460 | Msa1180410 | 0.825623 | 4.237345e-54 | -8.615850e-47 |
| Msa0117460 | Msa1183610 | 0.809369 | 1.958176e-50 | -8.615850e-47 |
| Msa0117460 | Msa1189630 | 0.842784 | 2.093214e-58 | -8.615850e-47 |
| Msa0117460 | Msa1202730 | 0.804678 | 1.924582e-49 | -8.615850e-47 |
| Msa0117460 | Msa1206440 | 0.814848 | 1.249702e-51 | -8.615850e-47 |
| Msa0117460 | Msa1208630 | 0.804364 | 2.237818e-49 | -8.615850e-47 |
| Msa0117460 | Msa1208750 | 0.833077 | 6.561439e-56 | -8.615850e-47 |
| Msa0117460 | Msa1215530 | 0.805066 | 1.596935e-49 | -8.615850e-47 |
| Msa0117460 | Msa1219250 | 0.804271 | 2.340250e-49 | -8.615850e-47 |
| Msa0117460 | Msa1222390 | 0.818721 | 1.690549e-52 | -8.615850e-47 |
| Msa0117460 | Msa1224140 | 0.810315 | 1.225019e-50 | -8.615850e-47 |
| Msa0117460 | Msa1224150 | 0.842680 | 2.230023e-58 | -8.615850e-47 |
| Msa0117460 | Msa1228950 | 0.833961 | 3.947832e-56 | -8.615850e-47 |
| Msa0117460 | Msa1232010 | 0.841447 | 4.725390e-58 | -8.615850e-47 |
| Msa0117460 | Msa1232860 | 0.801263 | 9.777447e-49 | -8.615850e-47 |
| Msa0117460 | Msa1244260 | 0.824425 | 8.126800e-54 | -8.615850e-47 |
| Msa0117460 | Msa1250490 | 0.813002 | 3.190432e-51 | -8.615850e-47 |
| Msa0117460 | Msa1257520 | 0.810439 | 1.152002e-50 | -8.615850e-47 |
| Msa0117460 | Msa1263460 | 0.817294 | 3.552484e-52 | -8.615850e-47 |
| Msa0117460 | Msa1269550 | 0.830965 | 2.182178e-55 | -8.615850e-47 |
| Msa0117460 | Msa1271600 | 0.800532 | 1.378866e-48 | -8.615850e-47 |
| Msa0117460 | Msa1274740 | 0.816580 | 5.138909e-52 | -8.615850e-47 |
| Msa0117460 | Msa1279340 | 0.802249 | 6.136433e-49 | -8.615850e-47 |
| Msa0117460 | Msa1279700 | 0.801319 | 9.521456e-49 | -8.615850e-47 |
| Msa0117460 | Msa1293530 | 0.829325 | 5.484290e-55 | -8.615850e-47 |
| Msa0117460 | Msa1300880 | 0.809381 | 1.946422e-50 | -8.615850e-47 |
| Msa0117460 | Msa1302750 | 0.839539 | 1.491729e-57 | -8.615850e-47 |
| Msa0117460 | Msa1305650 | 0.821103 | 4.823763e-53 | -8.615850e-47 |
| Msa0117460 | Msa1312730 | 0.820932 | 5.282043e-53 | -8.615850e-47 |
| Msa0117460 | Msa1324940 | 0.817964 | 2.508740e-52 | -8.615850e-47 |
| Msa0117460 | Msa1325270 | 0.821434 | 4.046322e-53 | -8.615850e-47 |
| Msa0117460 | Msa1329290 | 0.806640 | 7.455553e-50 | -8.615850e-47 |
| Msa0117460 | Msa1331900 | 0.806287 | 8.851982e-50 | -8.615850e-47 |
| Msa0117460 | Msa1336320 | 0.833691 | 4.610372e-56 | -8.615850e-47 |
| Msa0117460 | Msa1339250 | 0.866485 | 2.755321e-65 | -8.615850e-47 |
| Msa0117460 | Msa1349720 | 0.807356 | 5.262227e-50 | -8.615850e-47 |
| Msa0117460 | Msa1352820 | 0.808465 | 3.056482e-50 | -8.615850e-47 |
| Msa0117460 | Msa1367810 | 0.834508 | 2.877661e-56 | -8.615850e-47 |
| Msa0117460 | Msa1368730 | 0.816768 | 4.663219e-52 | -8.615850e-47 |
| Msa0117460 | Msa1374810 | 0.813284 | 2.766576e-51 | -8.615850e-47 |
| Msa0117460 | Msa1376530 | 0.801013 | 1.099833e-48 | -8.615850e-47 |
| Msa0117460 | Msa1376560 | 0.806631 | 7.491273e-50 | -8.615850e-47 |
| Msa0117460 | Msa1387650 | 0.813258 | 2.803853e-51 | -8.615850e-47 |
| Msa0117460 | Msa1396310 | 0.801556 | 8.515528e-49 | -8.615850e-47 |
| Msa0117460 | Msa1398840 | 0.822874 | 1.875421e-53 | -8.615850e-47 |
| Msa0117460 | Msa1406550 | 0.830288 | 3.195079e-55 | -8.615850e-47 |
| Msa0117460 | Msa1407710 | 0.800043 | 1.733948e-48 | -8.615850e-47 |
| Msa0117460 | Msa1410170 | 0.816454 | 5.483717e-52 | -8.615850e-47 |
| Msa0117460 | Msa1415250 | 0.856474 | 3.140756e-62 | -8.615850e-47 |
| Msa0117460 | Msa1416460 | 0.815895 | 7.312176e-52 | -8.615850e-47 |
| Msa0117460 | Msa1418600 | 0.850081 | 2.138836e-60 | -8.615850e-47 |
| Msa0117460 | Msa1422490 | 0.810864 | 9.323772e-51 | -8.615850e-47 |
| Msa0117460 | Msa1424240 | 0.826799 | 2.224218e-54 | -8.615850e-47 |
| Msa0117460 | Msa1429390 | 0.850903 | 1.256563e-60 | -8.615850e-47 |
| Msa0117460 | Msa1435910 | 0.813672 | 2.273320e-51 | -8.615850e-47 |
| Msa0117460 | Msa1437150 | 0.808317 | 3.287049e-50 | -8.615850e-47 |
| Msa0117460 | Msa1437320 | 0.820953 | 5.222739e-53 | -8.615850e-47 |
| Msa0117460 | Msa1437690 | 0.842933 | 1.909889e-58 | -8.615850e-47 |
| Msa0117460 | Msa1444750 | 0.834390 | 3.081253e-56 | -8.615850e-47 |
| Msa0117460 | Msa1449680 | 0.828106 | 1.081247e-54 | -8.615850e-47 |
| Msa0117460 | Msa1451840 | 0.812808 | 3.518490e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0117460 | MtrunA17_Chr1g0174241 | 97.329 | 337 | 9 | 0 | 1 | 337 | 1 | 337 | 0.0 | 685 |
| Msa0117460 | MtrunA17_Chr1g0174221 | 65.074 | 272 | 67 | 3 | 69 | 337 | 1 | 247 | 7.46e-123 | 353 |
| Msa0117460 | MtrunA17_Chr3g0122741 | 67.133 | 143 | 47 | 0 | 184 | 326 | 6 | 148 | 3.78e-70 | 215 |
| Msa0117460 | MtrunA17_Chr1g0198131 | 45.933 | 209 | 91 | 4 | 135 | 327 | 102 | 304 | 7.83e-58 | 189 |
| Msa0117460 | MtrunA17_Chr4g0005721 | 35.294 | 153 | 81 | 5 | 190 | 325 | 77 | 228 | 2.79e-18 | 82.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0117460 | AT3G57810.2 | 60.515 | 233 | 88 | 3 | 109 | 337 | 85 | 317 | 6.84e-97 | 290 |
| Msa0117460 | AT3G57810.4 | 60.515 | 233 | 88 | 3 | 109 | 337 | 85 | 317 | 6.84e-97 | 290 |
| Msa0117460 | AT3G57810.3 | 60.515 | 233 | 88 | 3 | 109 | 337 | 85 | 317 | 6.84e-97 | 290 |
| Msa0117460 | AT3G57810.1 | 46.154 | 130 | 68 | 2 | 109 | 236 | 85 | 214 | 6.67e-30 | 114 |
| Msa0117460 | AT2G38025.2 | 33.133 | 166 | 86 | 6 | 183 | 325 | 47 | 210 | 1.92e-15 | 74.7 |
| Msa0117460 | AT2G38025.1 | 33.133 | 166 | 86 | 6 | 183 | 325 | 70 | 233 | 2.01e-15 | 75.1 |
Find 104 sgRNAs with CRISPR-Local
Find 295 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTAATTCTCTCCTTGAATTA+AGG | 0.140121 | 1_3:-38402499 | None:intergenic |
| ACCATCCTGTTCAACAATTA+TGG | 0.171543 | 1_3:+38399802 | Msa0117460:CDS |
| TACACGGACTATTCTGTAAT+TGG | 0.221095 | 1_3:+38400175 | Msa0117460:CDS |
| TTGTTACATTGGAAAATAAA+AGG | 0.248552 | 1_3:-38402470 | None:intergenic |
| ATTCATATATTTCACGAATA+AGG | 0.255352 | 1_3:+38401768 | Msa0117460:CDS |
| CCATGGTACAGAACTCTAAT+TGG | 0.261607 | 1_3:-38402249 | None:intergenic |
| TTTATTGAAGATTGACTAAC+AGG | 0.280899 | 1_3:-38399632 | None:intergenic |
| GCACATGCGGAAGCAAATTA+TGG | 0.284182 | 1_3:+38400088 | Msa0117460:CDS |
| CGGTACTGAGCAGGAATTCC+TGG | 0.310419 | 1_3:+38400498 | Msa0117460:intron |
| TTCAATTGTGTTCAATCAAC+AGG | 0.320938 | 1_3:+38398145 | Msa0117460:five_prime_UTR |
| GGTAACCTCCTCTTATTGTT+TGG | 0.330745 | 1_3:-38399826 | None:intergenic |
| AATATGTATTGAAAGATAAT+AGG | 0.335473 | 1_3:-38402580 | None:intergenic |
| GAGAGCTAGCAGATGATTTA+CGG | 0.347294 | 1_3:+38400604 | Msa0117460:CDS |
| TAATTCTCTCCTTGAATTAA+GGG | 0.349871 | 1_3:-38402498 | None:intergenic |
| TGAATGCCCGATCTGAAAAC+TGG | 0.384594 | 1_3:-38399744 | None:intergenic |
| TTGCTCACGGGGCTTGTTTG+AGG | 0.386626 | 1_3:+38400547 | Msa0117460:CDS |
| TCCCTATGTTATTGTTTCCT+AGG | 0.390202 | 1_3:+38402423 | Msa0117460:three_prime_UTR |
| TGGTCATTATGATGCATTAG+AGG | 0.391695 | 1_3:+38402275 | Msa0117460:CDS |
| ATGTGAAGCAATGAACAATT+CGG | 0.401281 | 1_3:-38401816 | None:intergenic |
| CTGATGAGTTTATTAAAAGA+AGG | 0.402850 | 1_3:+38400913 | Msa0117460:CDS |
| AGAGTTCTGTACCATGGGTT+TGG | 0.408095 | 1_3:+38402255 | Msa0117460:CDS |
| TAAGGGGAAAATTGTTACAT+TGG | 0.412459 | 1_3:-38402481 | None:intergenic |
| TTGATATCAATAGCTGAGTA+TGG | 0.415356 | 1_3:+38402204 | Msa0117460:CDS |
| CACGGGGCTTGTTTGAGGTC+AGG | 0.423677 | 1_3:+38400552 | Msa0117460:CDS |
| CCATCCTGTTCAACAATTAT+GGG | 0.430653 | 1_3:+38399803 | Msa0117460:CDS |
| TGTTTCGCTCAGTTGCTCAC+GGG | 0.432312 | 1_3:+38400535 | Msa0117460:CDS |
| TTGATTGAACACAATTGAAA+GGG | 0.433699 | 1_3:-38398141 | None:intergenic |
| AGAGCTAGCAGATGATTTAC+GGG | 0.442495 | 1_3:+38400605 | Msa0117460:CDS |
| ATTCAGAGACAAATTATGTT+GGG | 0.448271 | 1_3:+38399762 | Msa0117460:CDS |
| TTGGCCCATAATTGTTGAAC+AGG | 0.449605 | 1_3:-38399807 | None:intergenic |
| TCATACATGTATACAGTGAT+TGG | 0.453163 | 1_3:-38402165 | None:intergenic |
| CAAATTATGGAAATGAGAAT+AGG | 0.456514 | 1_3:+38400101 | Msa0117460:CDS |
| CTCTCTCTGAAAGCTTTCAC+TGG | 0.459314 | 1_3:-38400586 | None:intergenic |
| ATAAATACTGTTGTTGTGAA+TGG | 0.462408 | 1_3:+38399650 | Msa0117460:CDS |
| AAAGGGGAAGCAGAGTTGTA+AGG | 0.462741 | 1_3:-38398124 | None:intergenic |
| ATGATGTATTCCTCAGCTAA+AGG | 0.463774 | 1_3:-38402546 | None:intergenic |
| TGTGAAGCAATGAACAATTC+GGG | 0.464400 | 1_3:-38401815 | None:intergenic |
| GACATCTTCAGGTTTATTGA+AGG | 0.466314 | 1_3:+38401737 | Msa0117460:intron |
| TCCCACATTAGACTTAACTT+TGG | 0.467403 | 1_3:-38399987 | None:intergenic |
| TAATTTGCTTCCGCATGTGC+AGG | 0.478128 | 1_3:-38400085 | None:intergenic |
| CCACGCAGTTGTGCATCAGT+TGG | 0.487857 | 1_3:+38400022 | Msa0117460:CDS |
| CAATTAGAGTTCTGTACCAT+GGG | 0.488021 | 1_3:+38402250 | Msa0117460:CDS |
| ATTATGGGCCAAACAATAAG+AGG | 0.488403 | 1_3:+38399818 | Msa0117460:CDS |
| ATCATGCTTCTCTAAGCAAA+GGG | 0.502488 | 1_3:+38399853 | Msa0117460:CDS |
| TGAAAGCTTTCACTGGGAGG+CGG | 0.503128 | 1_3:-38400579 | None:intergenic |
| GCTGAGTATGGCCAAGAATA+CGG | 0.504310 | 1_3:+38402216 | Msa0117460:CDS |
| GTTCTGTAGTATCTCGGAAA+AGG | 0.504506 | 1_3:+38399894 | Msa0117460:CDS |
| AAGTATAGAGAATTCCGTTA+TGG | 0.505129 | 1_3:+38402447 | Msa0117460:three_prime_UTR |
| TTTATAGTTCTGTAGTATCT+CGG | 0.505485 | 1_3:+38399888 | Msa0117460:CDS |
| CACTGTATACATGTATGATC+GGG | 0.508209 | 1_3:+38402170 | Msa0117460:CDS |
| TTCCAAAGTTAAGTCTAATG+TGG | 0.509154 | 1_3:+38399985 | Msa0117460:CDS |
| AATTCTCTCCTTGAATTAAG+GGG | 0.510172 | 1_3:-38402497 | None:intergenic |
| AGCAGATGATTTACGGGCTA+AGG | 0.510313 | 1_3:+38400611 | Msa0117460:CDS |
| ATGTTTCGCTCAGTTGCTCA+CGG | 0.514372 | 1_3:+38400534 | Msa0117460:CDS |
| ACAATAAGAGGAGGTTACCT+TGG | 0.515837 | 1_3:+38399830 | Msa0117460:CDS |
| TGATGAGTTTATTAAAAGAA+GGG | 0.518610 | 1_3:+38400914 | Msa0117460:CDS |
| CCCATAATTGTTGAACAGGA+TGG | 0.519799 | 1_3:-38399803 | None:intergenic |
| AAATGCTAGAGTCGTGACTT+AGG | 0.524456 | 1_3:-38402315 | None:intergenic |
| CTAATGTGGGACGAATAACT+TGG | 0.525560 | 1_3:+38399999 | Msa0117460:CDS |
| CATTCAGAGACAAATTATGT+TGG | 0.529174 | 1_3:+38399761 | Msa0117460:CDS |
| TCACTGTATACATGTATGAT+CGG | 0.529463 | 1_3:+38402169 | Msa0117460:CDS |
| TGGAAAATAAAAGGCCATAA+CGG | 0.535136 | 1_3:-38402461 | None:intergenic |
| AAAGTGAAGAGGAGATTCCT+CGG | 0.540294 | 1_3:-38399718 | None:intergenic |
| GGAATTCTCTATACTTGCCT+AGG | 0.540645 | 1_3:-38402440 | None:intergenic |
| GGTACTGAGCAGGAATTCCT+GGG | 0.543200 | 1_3:+38400499 | Msa0117460:intron |
| GTTGATTGAACACAATTGAA+AGG | 0.544804 | 1_3:-38398142 | None:intergenic |
| AACATGCATCTTCCATCCCC+AGG | 0.548106 | 1_3:-38400516 | None:intergenic |
| TGCCTAGGAAACAATAACAT+AGG | 0.551063 | 1_3:-38402425 | None:intergenic |
| GTTTCGCTCAGTTGCTCACG+GGG | 0.553844 | 1_3:+38400536 | Msa0117460:CDS |
| GCCTAGGAAACAATAACATA+GGG | 0.554009 | 1_3:-38402424 | None:intergenic |
| TCCAAAGTTAAGTCTAATGT+GGG | 0.555282 | 1_3:+38399986 | Msa0117460:CDS |
| CCAATTAGAGTTCTGTACCA+TGG | 0.557173 | 1_3:+38402249 | Msa0117460:CDS |
| TACATGTATGATCGGGAAGC+TGG | 0.561772 | 1_3:+38402177 | Msa0117460:CDS |
| TGAGCAGGAATTCCTGGGGA+TGG | 0.563823 | 1_3:+38400504 | Msa0117460:intron |
| AATAAGGAAGCCTCATGTGT+GGG | 0.572470 | 1_3:+38401784 | Msa0117460:CDS |
| GGTTCGCCTCCCCACACATG+AGG | 0.573463 | 1_3:-38401794 | None:intergenic |
| TGTATTCCTCAGCTAAAGGC+CGG | 0.576438 | 1_3:-38402542 | None:intergenic |
| CTCTGAAAGCTTTCACTGGG+AGG | 0.576755 | 1_3:-38400582 | None:intergenic |
| AAGTGAAGAGGAGATTCCTC+GGG | 0.585835 | 1_3:-38399717 | None:intergenic |
| GATCATGCTTCTCTAAGCAA+AGG | 0.589019 | 1_3:+38399852 | Msa0117460:CDS |
| AAGAATGAGTATGAGGCTGT+TGG | 0.589249 | 1_3:+38399943 | Msa0117460:CDS |
| AAAGAAGGGAAGAAACAGAA+TGG | 0.600288 | 1_3:+38400928 | Msa0117460:CDS |
| TCAAATGTTAAAGTCGCACA+TGG | 0.602503 | 1_3:+38400142 | Msa0117460:CDS |
| AAGTTCTGAACCTGCACATG+CGG | 0.602604 | 1_3:+38400075 | Msa0117460:CDS |
| GCTTAGAGAAGCATGATCCA+AGG | 0.617746 | 1_3:-38399847 | None:intergenic |
| TCTCTCTGAAAGCTTTCACT+GGG | 0.624685 | 1_3:-38400585 | None:intergenic |
| AAGTTATATTATATTGTGTG+AGG | 0.625794 | 1_3:-38398099 | None:intergenic |
| ATGTATGATCGGGAAGCTGG+TGG | 0.628891 | 1_3:+38402180 | Msa0117460:CDS |
| GAATAAGGAAGCCTCATGTG+TGG | 0.639078 | 1_3:+38401783 | Msa0117460:CDS |
| AAAACTGGAGGAAAGTGAAG+AGG | 0.641935 | 1_3:-38399729 | None:intergenic |
| CATCATAATGACCAAACCCA+TGG | 0.642715 | 1_3:-38402266 | None:intergenic |
| AGGAAGCCTCATGTGTGGGG+AGG | 0.655210 | 1_3:+38401788 | Msa0117460:CDS |
| ATCTGCAGTCTTCAGACCCG+AGG | 0.656529 | 1_3:+38399701 | Msa0117460:CDS |
| TGATTGAACACAATTGAAAG+GGG | 0.657653 | 1_3:-38398140 | None:intergenic |
| ACATGGGAAGAAAGTTTACA+CGG | 0.662811 | 1_3:+38400159 | Msa0117460:CDS |
| ATGGGCCAAACAATAAGAGG+AGG | 0.664156 | 1_3:+38399821 | Msa0117460:CDS |
| ATAAGGAAGCCTCATGTGTG+GGG | 0.667700 | 1_3:+38401785 | Msa0117460:CDS |
| CGTGTCAAAGAATGAGTATG+AGG | 0.669857 | 1_3:+38399936 | Msa0117460:CDS |
| CAAATGTTAAAGTCGCACAT+GGG | 0.694319 | 1_3:+38400143 | Msa0117460:CDS |
| ATGCCCGATCTGAAAACTGG+AGG | 0.695425 | 1_3:-38399741 | None:intergenic |
| GTATGGCCAAGAATACGGCA+AGG | 0.698697 | 1_3:+38402221 | Msa0117460:CDS |
| TCATGCTTCTCTAAGCAAAG+GGG | 0.715093 | 1_3:+38399854 | Msa0117460:CDS |
| GTACTGAGCAGGAATTCCTG+GGG | 0.731280 | 1_3:+38400500 | Msa0117460:intron |
| CCAACTGATGCACAACTGCG+TGG | 0.739508 | 1_3:-38400022 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTTTTAATTTATTTTAAA+CGG | + | chr1_3:38398398-38398417 | Msa0117460:intron | 0.0% |
| !!! | TTTTATTTTACTTATAGAAT+TGG | - | chr1_3:38398058-38398077 | None:intergenic | 10.0% |
| !! | TTAATTTAATAAAAAAACGA+GGG | - | chr1_3:38398183-38398202 | None:intergenic | 10.0% |
| !!! | TTTAATTTAATAAAAAAACG+AGG | - | chr1_3:38398184-38398203 | None:intergenic | 10.0% |
| !!! | AAAAAAACATAAATCATTTT+TGG | - | chr1_3:38398380-38398399 | None:intergenic | 10.0% |
| !!! | TCACTAATTATATATTTTTT+GGG | - | chr1_3:38398480-38398499 | None:intergenic | 10.0% |
| !!! | TTCACTAATTATATATTTTT+TGG | - | chr1_3:38398481-38398500 | None:intergenic | 10.0% |
| !!! | GTTTTTTTAATATAGAAAAA+TGG | - | chr1_3:38399173-38399192 | None:intergenic | 10.0% |
| !! | TAATATGTTTATTATAGAAA+TGG | + | chr1_3:38399543-38399562 | Msa0117460:intron | 10.0% |
| !!! | TTTTTATTTATTCATATTGT+TGG | + | chr1_3:38402378-38402397 | Msa0117460:three_prime_UTR | 10.0% |
| !! | CATTGTATAATTGTAAATAT+TGG | - | chr1_3:38398296-38398315 | None:intergenic | 15.0% |
| !! | ATATAATTAGTGAACTATTA+AGG | + | chr1_3:38398487-38398506 | Msa0117460:intron | 15.0% |
| !! | TTGAAAGATTAATATGAAAT+GGG | - | chr1_3:38400806-38400825 | None:intergenic | 15.0% |
| !! | ATTGAAAGATTAATATGAAA+TGG | - | chr1_3:38400807-38400826 | None:intergenic | 15.0% |
| !! | AAATTGGAAAATAGATTAAA+AGG | - | chr1_3:38401022-38401041 | None:intergenic | 15.0% |
| !! | TTTAACATGCAAATAAAATA+AGG | - | chr1_3:38401064-38401083 | None:intergenic | 15.0% |
| !! | AAATAAAATAAACATTCTTG+AGG | + | chr1_3:38401463-38401482 | Msa0117460:intron | 15.0% |
| !! | AATATGTATTGAAAGATAAT+AGG | - | chr1_3:38402583-38402602 | None:intergenic | 15.0% |
| !! | AAGTTATATTATATTGTGTG+AGG | - | chr1_3:38398102-38398121 | None:intergenic | 20.0% |
| !!! | TTATTTTCTTCAAATTCTAG+AGG | + | chr1_3:38398246-38398265 | Msa0117460:intron | 20.0% |
| !!! | AGATCCTGTTTTTTAATTTT+TGG | + | chr1_3:38398330-38398349 | Msa0117460:intron | 20.0% |
| !! | AAGACCAAAAATTAAAAAAC+AGG | - | chr1_3:38398337-38398356 | None:intergenic | 20.0% |
| !! | TTCATTAGATATGTGTTAAA+TGG | + | chr1_3:38399036-38399055 | Msa0117460:intron | 20.0% |
| !! | TACTTAATAGTGTAAGTAAA+TGG | + | chr1_3:38399066-38399085 | Msa0117460:intron | 20.0% |
| !!! | TTTTAGAACTATACTATACA+AGG | + | chr1_3:38399359-38399378 | Msa0117460:intron | 20.0% |
| !!! | TTTAGAACTATACTATACAA+GGG | + | chr1_3:38399360-38399379 | Msa0117460:intron | 20.0% |
| !! | ATGTTTATTATAGAAATGGT+TGG | + | chr1_3:38399547-38399566 | Msa0117460:intron | 20.0% |
| !!! | CAATGTTTTAAAAATCAAAC+AGG | + | chr1_3:38400221-38400240 | Msa0117460:intron | 20.0% |
| !!! | CTTCTTGTTTATAAAACTTA+CGG | + | chr1_3:38400478-38400497 | Msa0117460:intron | 20.0% |
| !!! | TTTCTATGTAGTTTTTTTCA+TGG | - | chr1_3:38400704-38400723 | None:intergenic | 20.0% |
| !! | TGATGAGTTTATTAAAAGAA+GGG | + | chr1_3:38400914-38400933 | Msa0117460:CDS | 20.0% |
| !! | ACTAACTTAAAATGACTATA+GGG | - | chr1_3:38401133-38401152 | None:intergenic | 20.0% |
| !! | TTTAAATCTCTAGTTACAAT+TGG | - | chr1_3:38401445-38401464 | None:intergenic | 20.0% |
| !!! | GTTTCTTTGTTTACTATAAA+AGG | + | chr1_3:38401667-38401686 | Msa0117460:intron | 20.0% |
| !! | ATTCATATATTTCACGAATA+AGG | + | chr1_3:38401768-38401787 | Msa0117460:CDS | 20.0% |
| !!! | TCACTTTATTTTCAACAATT+CGG | + | chr1_3:38402064-38402083 | Msa0117460:intron | 20.0% |
| !! | ATGCATATATATTATACCTT+AGG | - | chr1_3:38402108-38402127 | None:intergenic | 20.0% |
| !! | AGGTATAATATATATGCATT+TGG | + | chr1_3:38402109-38402128 | Msa0117460:intron | 20.0% |
| !! | TTGTTACATTGGAAAATAAA+AGG | - | chr1_3:38402473-38402492 | None:intergenic | 20.0% |
| ! | TTGATTGAACACAATTGAAA+GGG | - | chr1_3:38398144-38398163 | None:intergenic | 25.0% |
| ! | TTAAATTAAATTGTAGCCAG+AGG | + | chr1_3:38398194-38398213 | Msa0117460:intron | 25.0% |
| !!! | TAAATCATTTTTGGATGAAC+AGG | - | chr1_3:38398371-38398390 | None:intergenic | 25.0% |
| ! | TATAGAAAAATGGGAAAAAG+AGG | - | chr1_3:38399163-38399182 | None:intergenic | 25.0% |
| ! | TTTATTGAAGATTGACTAAC+AGG | - | chr1_3:38399635-38399654 | None:intergenic | 25.0% |
| ! | ATAAATACTGTTGTTGTGAA+TGG | + | chr1_3:38399650-38399669 | Msa0117460:CDS | 25.0% |
| ! | ATTCAGAGACAAATTATGTT+GGG | + | chr1_3:38399762-38399781 | Msa0117460:CDS | 25.0% |
| !! | TTTATAGTTCTGTAGTATCT+CGG | + | chr1_3:38399888-38399907 | Msa0117460:CDS | 25.0% |
| !!! | TTGGAAAGCATTTTTTGTTT+AGG | - | chr1_3:38399971-38399990 | None:intergenic | 25.0% |
| ! | CAAATTATGGAAATGAGAAT+AGG | + | chr1_3:38400101-38400120 | Msa0117460:CDS | 25.0% |
| !!! | AACATTGCTTTTAGCATAAT+GGG | - | chr1_3:38400208-38400227 | None:intergenic | 25.0% |
| !!! | AAACATTGCTTTTAGCATAA+TGG | - | chr1_3:38400209-38400228 | None:intergenic | 25.0% |
| !!! | TGAGCCAATGTTTTTAAAAT+CGG | - | chr1_3:38400354-38400373 | None:intergenic | 25.0% |
| ! | GTTAACATAGATAATAACCT+AGG | + | chr1_3:38400439-38400458 | Msa0117460:intron | 25.0% |
| ! | AAAACAGAATAATTGAAAGC+AGG | + | chr1_3:38400729-38400748 | Msa0117460:intron | 25.0% |
| ! | AAACAGAATAATTGAAAGCA+GGG | + | chr1_3:38400730-38400749 | Msa0117460:intron | 25.0% |
| ! | CTGATGAGTTTATTAAAAGA+AGG | + | chr1_3:38400913-38400932 | Msa0117460:CDS | 25.0% |
| ! | AAATGACTATAGGGAATATT+TGG | - | chr1_3:38401124-38401143 | None:intergenic | 25.0% |
| ! | GACTAACTTAAAATGACTAT+AGG | - | chr1_3:38401134-38401153 | None:intergenic | 25.0% |
| ! | TGAAAATAAGTAGATGTAAG+TGG | - | chr1_3:38401168-38401187 | None:intergenic | 25.0% |
| !!! | CTTACATCTACTTATTTTCA+AGG | + | chr1_3:38401168-38401187 | Msa0117460:intron | 25.0% |
| ! | AAAATATGAAGTGGGTAAAA+GGG | - | chr1_3:38401244-38401263 | None:intergenic | 25.0% |
| ! | AAAAATATGAAGTGGGTAAA+AGG | - | chr1_3:38401245-38401264 | None:intergenic | 25.0% |
| !! | TTTTACCCACTTCATATTTT+TGG | + | chr1_3:38401244-38401263 | Msa0117460:intron | 25.0% |
| ! | ATTCTCCAAAAATATGAAGT+GGG | - | chr1_3:38401252-38401271 | None:intergenic | 25.0% |
| ! | AATTCTCCAAAAATATGAAG+TGG | - | chr1_3:38401253-38401272 | None:intergenic | 25.0% |
| ! | AATCAAAAGTGAAAATGATG+TGG | - | chr1_3:38401538-38401557 | None:intergenic | 25.0% |
| ! | TATACAAGAGTAAACTATTC+TGG | + | chr1_3:38401577-38401596 | Msa0117460:intron | 25.0% |
| ! | TAATTCTCTCCTTGAATTAA+GGG | - | chr1_3:38402501-38402520 | None:intergenic | 25.0% |
| ! | TTAATTCTCTCCTTGAATTA+AGG | - | chr1_3:38402502-38402521 | None:intergenic | 25.0% |
| ! | TGTATTCTCACTATAAAAAC+CGG | + | chr1_3:38402523-38402542 | Msa0117460:three_prime_UTR | 25.0% |
| TGATTGAACACAATTGAAAG+GGG | - | chr1_3:38398143-38398162 | None:intergenic | 30.0% | |
| GTTGATTGAACACAATTGAA+AGG | - | chr1_3:38398145-38398164 | None:intergenic | 30.0% | |
| TTCAATTGTGTTCAATCAAC+AGG | + | chr1_3:38398145-38398164 | Msa0117460:five_prime_UTR | 30.0% | |
| TTAATAAAAAAACGAGGGAG+AGG | - | chr1_3:38398178-38398197 | None:intergenic | 30.0% | |
| !! | TATTTTAAACGGGTGCAATT+TGG | + | chr1_3:38398409-38398428 | Msa0117460:intron | 30.0% |
| AAATTCAGTTATGCGTCATT+AGG | + | chr1_3:38398806-38398825 | Msa0117460:intron | 30.0% | |
| ATAGTGTAAGTAAATGGTGA+AGG | + | chr1_3:38399072-38399091 | Msa0117460:intron | 30.0% | |
| TAGTGTAAGTAAATGGTGAA+GGG | + | chr1_3:38399073-38399092 | Msa0117460:intron | 30.0% | |
| CTATAATCCAAAAAATGACC+AGG | - | chr1_3:38399266-38399285 | None:intergenic | 30.0% | |
| ! | TAGCATCTATTGTATTGATC+TGG | + | chr1_3:38399283-38399302 | Msa0117460:intron | 30.0% |
| GGCATAAAACTCATATCATT+TGG | - | chr1_3:38399414-38399433 | None:intergenic | 30.0% | |
| TCATGAACATGACTAGAATA+AGG | + | chr1_3:38399438-38399457 | Msa0117460:intron | 30.0% | |
| CACATACAAACATTATCTAC+TGG | - | chr1_3:38399510-38399529 | None:intergenic | 30.0% | |
| CAGTAGATAATGTTTGTATG+TGG | + | chr1_3:38399508-38399527 | Msa0117460:intron | 30.0% | |
| ATATACTTCGAATCTGATTC+AGG | + | chr1_3:38399584-38399603 | Msa0117460:intron | 30.0% | |
| CATTCAGAGACAAATTATGT+TGG | + | chr1_3:38399761-38399780 | Msa0117460:CDS | 30.0% | |
| TTCCAAAGTTAAGTCTAATG+TGG | + | chr1_3:38399985-38400004 | Msa0117460:CDS | 30.0% | |
| TCCAAAGTTAAGTCTAATGT+GGG | + | chr1_3:38399986-38400005 | Msa0117460:CDS | 30.0% | |
| !!! | CATCAGTTGGCTTTATTTTT+GGG | + | chr1_3:38400035-38400054 | Msa0117460:CDS | 30.0% |
| !!! | TTTTTAAAATCGGACTGAAC+CGG | - | chr1_3:38400344-38400363 | None:intergenic | 30.0% |
| !! | CAGTCCGATTTTAAAAACAT+TGG | + | chr1_3:38400347-38400366 | Msa0117460:intron | 30.0% |
| TTCGACATTTATATTCACTG+CGG | + | chr1_3:38400768-38400787 | Msa0117460:intron | 30.0% | |
| ATTGAATATCTGTAGCATTC+TGG | + | chr1_3:38400962-38400981 | Msa0117460:intron | 30.0% | |
| ! | TCTTCTGGAGAAAAACAAAT+TGG | - | chr1_3:38401038-38401057 | None:intergenic | 30.0% |
| !! | ATTTGTTTTTCTCCAGAAGA+AGG | + | chr1_3:38401038-38401057 | Msa0117460:intron | 30.0% |
| AATAAAATAAGGCCTTCTTC+TGG | - | chr1_3:38401053-38401072 | None:intergenic | 30.0% | |
| AATAAGTAGATGTAAGTGGT+TGG | - | chr1_3:38401164-38401183 | None:intergenic | 30.0% | |
| AAATATGAAGTGGGTAAAAG+GGG | - | chr1_3:38401243-38401262 | None:intergenic | 30.0% | |
| ! | TCATGAAAAAGCTGTTGTTT+GGG | - | chr1_3:38401285-38401304 | None:intergenic | 30.0% |
| TTCATGAAAAAGCTGTTGTT+TGG | - | chr1_3:38401286-38401305 | None:intergenic | 30.0% | |
| GTTTACTCTTGTATAAGTAG+AGG | - | chr1_3:38401572-38401591 | None:intergenic | 30.0% | |
| ! | GATTTTCTTATGACATCTTC+AGG | + | chr1_3:38401726-38401745 | Msa0117460:intron | 30.0% |
| ATGTGAAGCAATGAACAATT+CGG | - | chr1_3:38401819-38401838 | None:intergenic | 30.0% | |
| AAATTCACCTTTCTTTATGC+AGG | + | chr1_3:38401876-38401895 | Msa0117460:intron | 30.0% | |
| CATTTCTTTGCAGTTTAGTT+CGG | - | chr1_3:38401943-38401962 | None:intergenic | 30.0% | |
| ! | CAAACAGTTTCTTTGAGTTT+AGG | + | chr1_3:38401966-38401985 | Msa0117460:intron | 30.0% |
| TTATACCTTAGGATTGTTCA+TGG | - | chr1_3:38402097-38402116 | None:intergenic | 30.0% | |
| TCATACATGTATACAGTGAT+TGG | - | chr1_3:38402168-38402187 | None:intergenic | 30.0% | |
| TCACTGTATACATGTATGAT+CGG | + | chr1_3:38402169-38402188 | Msa0117460:CDS | 30.0% | |
| TTGATATCAATAGCTGAGTA+TGG | + | chr1_3:38402204-38402223 | Msa0117460:CDS | 30.0% | |
| ATTAGAGGTTCCTAAAAAGA+AGG | + | chr1_3:38402290-38402309 | Msa0117460:CDS | 30.0% | |
| TTAGAGGTTCCTAAAAAGAA+GGG | + | chr1_3:38402291-38402310 | Msa0117460:CDS | 30.0% | |
| AAGTATAGAGAATTCCGTTA+TGG | + | chr1_3:38402447-38402466 | Msa0117460:three_prime_UTR | 30.0% | |
| TGGAAAATAAAAGGCCATAA+CGG | - | chr1_3:38402464-38402483 | None:intergenic | 30.0% | |
| TAAGGGGAAAATTGTTACAT+TGG | - | chr1_3:38402484-38402503 | None:intergenic | 30.0% | |
| ! | ACAATTTTCCCCTTAATTCA+AGG | + | chr1_3:38402489-38402508 | Msa0117460:three_prime_UTR | 30.0% |
| AATTCTCTCCTTGAATTAAG+GGG | - | chr1_3:38402500-38402519 | None:intergenic | 30.0% | |
| !! | TGGGTTTCTAGTTATTAACG+TGG | - | chr1_3:38398461-38398480 | None:intergenic | 35.0% |
| GTACAATGTGGTGAAAAGAA+CGG | + | chr1_3:38398765-38398784 | Msa0117460:intron | 35.0% | |
| GACACATAGAAGAACTTAGA+TGG | + | chr1_3:38398918-38398937 | Msa0117460:intron | 35.0% | |
| TAAGACTAAGATGCATTCGA+AGG | + | chr1_3:38398951-38398970 | Msa0117460:intron | 35.0% | |
| TGGATTGAGGTAAATGTGAA+GGG | + | chr1_3:38399102-38399121 | Msa0117460:intron | 35.0% | |
| ATGTGAAGGGAAGAAGATAA+TGG | + | chr1_3:38399115-38399134 | Msa0117460:intron | 35.0% | |
| TCTAGTCATGTTCATGATGT+GGG | - | chr1_3:38399435-38399454 | None:intergenic | 35.0% | |
| TTCTAGTCATGTTCATGATG+TGG | - | chr1_3:38399436-38399455 | None:intergenic | 35.0% | |
| ACCATCCTGTTCAACAATTA+TGG | + | chr1_3:38399802-38399821 | Msa0117460:CDS | 35.0% | |
| CCATCCTGTTCAACAATTAT+GGG | + | chr1_3:38399803-38399822 | Msa0117460:CDS | 35.0% | |
| ATTATGGGCCAAACAATAAG+AGG | + | chr1_3:38399818-38399837 | Msa0117460:CDS | 35.0% | |
| ATCATGCTTCTCTAAGCAAA+GGG | + | chr1_3:38399853-38399872 | Msa0117460:CDS | 35.0% | |
| TCCCACATTAGACTTAACTT+TGG | - | chr1_3:38399990-38400009 | None:intergenic | 35.0% | |
| !!! | GCATCAGTTGGCTTTATTTT+TGG | + | chr1_3:38400034-38400053 | Msa0117460:CDS | 35.0% |
| TCAAATGTTAAAGTCGCACA+TGG | + | chr1_3:38400142-38400161 | Msa0117460:CDS | 35.0% | |
| CAAATGTTAAAGTCGCACAT+GGG | + | chr1_3:38400143-38400162 | Msa0117460:CDS | 35.0% | |
| ACATGGGAAGAAAGTTTACA+CGG | + | chr1_3:38400159-38400178 | Msa0117460:CDS | 35.0% | |
| ! | TACACGGACTATTCTGTAAT+TGG | + | chr1_3:38400175-38400194 | Msa0117460:CDS | 35.0% |
| GCAAATGCATATAAATGCCT+AGG | - | chr1_3:38400459-38400478 | None:intergenic | 35.0% | |
| ACAGAGAAAGTTCAAGAACA+GGG | - | chr1_3:38400877-38400896 | None:intergenic | 35.0% | |
| TACAGAGAAAGTTCAAGAAC+AGG | - | chr1_3:38400878-38400897 | None:intergenic | 35.0% | |
| ! | CTTTCTCTGTACTATTTCTC+AGG | + | chr1_3:38400887-38400906 | Msa0117460:intron | 35.0% |
| AAAGAAGGGAAGAAACAGAA+TGG | + | chr1_3:38400928-38400947 | Msa0117460:CDS | 35.0% | |
| ACATCACAATATGTCAGCTT+AGG | + | chr1_3:38401618-38401637 | Msa0117460:intron | 35.0% | |
| AGGCTTGTATGTCTATAAGA+AGG | + | chr1_3:38401638-38401657 | Msa0117460:intron | 35.0% | |
| ! | GACATCTTCAGGTTTATTGA+AGG | + | chr1_3:38401737-38401756 | Msa0117460:intron | 35.0% |
| TGTGAAGCAATGAACAATTC+GGG | - | chr1_3:38401818-38401837 | None:intergenic | 35.0% | |
| GGGATCTGTATTCAAACTAT+AGG | - | chr1_3:38401999-38402018 | None:intergenic | 35.0% | |
| ! | TTTAGGTTCAGTTCAGGTTA+GGG | - | chr1_3:38402019-38402038 | None:intergenic | 35.0% |
| ACAAACCATGAACAATCCTA+AGG | + | chr1_3:38402089-38402108 | Msa0117460:intron | 35.0% | |
| CACTGTATACATGTATGATC+GGG | + | chr1_3:38402170-38402189 | Msa0117460:CDS | 35.0% | |
| CAATTAGAGTTCTGTACCAT+GGG | + | chr1_3:38402250-38402269 | Msa0117460:CDS | 35.0% | |
| TGGTCATTATGATGCATTAG+AGG | + | chr1_3:38402275-38402294 | Msa0117460:CDS | 35.0% | |
| TCCCTATGTTATTGTTTCCT+AGG | + | chr1_3:38402423-38402442 | Msa0117460:three_prime_UTR | 35.0% | |
| GCCTAGGAAACAATAACATA+GGG | - | chr1_3:38402427-38402446 | None:intergenic | 35.0% | |
| TGCCTAGGAAACAATAACAT+AGG | - | chr1_3:38402428-38402447 | None:intergenic | 35.0% | |
| ATGATGTATTCCTCAGCTAA+AGG | - | chr1_3:38402549-38402568 | None:intergenic | 35.0% | |
| GAATTTGTGAATGACTCCTC+TGG | - | chr1_3:38398213-38398232 | None:intergenic | 40.0% | |
| ! | AAAGCTTGTTCCATCTTCCT+GGG | - | chr1_3:38398640-38398659 | None:intergenic | 40.0% |
| ! | TAAAGCTTGTTCCATCTTCC+TGG | - | chr1_3:38398641-38398660 | None:intergenic | 40.0% |
| CACATTGTACAATCTTGCAG+GGG | - | chr1_3:38398755-38398774 | None:intergenic | 40.0% | |
| CCACATTGTACAATCTTGCA+GGG | - | chr1_3:38398756-38398775 | None:intergenic | 40.0% | |
| ACCACATTGTACAATCTTGC+AGG | - | chr1_3:38398757-38398776 | None:intergenic | 40.0% | |
| TTCAGTTATGCGTCATTAGG+TGG | + | chr1_3:38398809-38398828 | Msa0117460:intron | 40.0% | |
| AGAAGAACTTAGATGGCATC+TGG | + | chr1_3:38398925-38398944 | Msa0117460:intron | 40.0% | |
| ACTAAGATGCATTCGAAGGT+TGG | + | chr1_3:38398955-38398974 | Msa0117460:intron | 40.0% | |
| TAAATGGTGAAGGGAAGATG+TGG | + | chr1_3:38399082-38399101 | Msa0117460:intron | 40.0% | |
| ! | GTGGATTGAGGTAAATGTGA+AGG | + | chr1_3:38399101-38399120 | Msa0117460:intron | 40.0% |
| AATGGGAAAAAGAGGACAGT+TGG | - | chr1_3:38399155-38399174 | None:intergenic | 40.0% | |
| TATTCTCAGCGTTCATGTGT+TGG | + | chr1_3:38399306-38399325 | Msa0117460:intron | 40.0% | |
| AAAGTGAAGAGGAGATTCCT+CGG | - | chr1_3:38399721-38399740 | None:intergenic | 40.0% | |
| AAAACTGGAGGAAAGTGAAG+AGG | - | chr1_3:38399732-38399751 | None:intergenic | 40.0% | |
| ! | CTTTCCTCCAGTTTTCAGAT+CGG | + | chr1_3:38399737-38399756 | Msa0117460:CDS | 40.0% |
| ! | TTTCCTCCAGTTTTCAGATC+GGG | + | chr1_3:38399738-38399757 | Msa0117460:CDS | 40.0% |
| CCCATAATTGTTGAACAGGA+TGG | - | chr1_3:38399806-38399825 | None:intergenic | 40.0% | |
| TTGGCCCATAATTGTTGAAC+AGG | - | chr1_3:38399810-38399829 | None:intergenic | 40.0% | |
| GGTAACCTCCTCTTATTGTT+TGG | - | chr1_3:38399829-38399848 | None:intergenic | 40.0% | |
| ACAATAAGAGGAGGTTACCT+TGG | + | chr1_3:38399830-38399849 | Msa0117460:CDS | 40.0% | |
| GATCATGCTTCTCTAAGCAA+AGG | + | chr1_3:38399852-38399871 | Msa0117460:CDS | 40.0% | |
| TCATGCTTCTCTAAGCAAAG+GGG | + | chr1_3:38399854-38399873 | Msa0117460:CDS | 40.0% | |
| GTTCTGTAGTATCTCGGAAA+AGG | + | chr1_3:38399894-38399913 | Msa0117460:CDS | 40.0% | |
| CGTGTCAAAGAATGAGTATG+AGG | + | chr1_3:38399936-38399955 | Msa0117460:CDS | 40.0% | |
| AAGAATGAGTATGAGGCTGT+TGG | + | chr1_3:38399943-38399962 | Msa0117460:CDS | 40.0% | |
| CTAATGTGGGACGAATAACT+TGG | + | chr1_3:38399999-38400018 | Msa0117460:CDS | 40.0% | |
| TAACCAACTGCTGTGAAAAC+TGG | + | chr1_3:38400246-38400265 | Msa0117460:intron | 40.0% | |
| CAATGCAGTCTCATTGAACT+AGG | - | chr1_3:38400292-38400311 | None:intergenic | 40.0% | |
| ! | TAAAACTTACGGTACTGAGC+AGG | + | chr1_3:38400489-38400508 | Msa0117460:intron | 40.0% |
| ! | TCTCTCTGAAAGCTTTCACT+GGG | - | chr1_3:38400588-38400607 | None:intergenic | 40.0% |
| GAGAGCTAGCAGATGATTTA+CGG | + | chr1_3:38400604-38400623 | Msa0117460:CDS | 40.0% | |
| AGAGCTAGCAGATGATTTAC+GGG | + | chr1_3:38400605-38400624 | Msa0117460:CDS | 40.0% | |
| !!! | AGTTTTTTTCATGGCTGCCA+AGG | - | chr1_3:38400695-38400714 | None:intergenic | 40.0% |
| CGACACAGAATGACTACAAA+CGG | - | chr1_3:38400845-38400864 | None:intergenic | 40.0% | |
| GCAGAAACATATTCCCTACT+TGG | + | chr1_3:38401095-38401114 | Msa0117460:intron | 40.0% | |
| GAATATTTGGACGCCAAGTA+GGG | - | chr1_3:38401111-38401130 | None:intergenic | 40.0% | |
| ! | AAAGCTGTTGTTTGGGAAGA+AGG | - | chr1_3:38401278-38401297 | None:intergenic | 40.0% |
| GGTTTGACACTAACTGATGT+GGG | - | chr1_3:38401388-38401407 | None:intergenic | 40.0% | |
| ATCAACTCAGCTGCAATTGA+CGG | - | chr1_3:38401409-38401428 | None:intergenic | 40.0% | |
| ATGTGGAGTGAGAAAGTAGT+GGG | - | chr1_3:38401521-38401540 | None:intergenic | 40.0% | |
| CTCTTGTATAAGTAGAGGTG+TGG | - | chr1_3:38401567-38401586 | None:intergenic | 40.0% | |
| AATAAGGAAGCCTCATGTGT+GGG | + | chr1_3:38401784-38401803 | Msa0117460:CDS | 40.0% | |
| CCTGATACCTGCATAAAGAA+AGG | - | chr1_3:38401886-38401905 | None:intergenic | 40.0% | |
| CCTTTCTTTATGCAGGTATC+AGG | + | chr1_3:38401883-38401902 | Msa0117460:intron | 40.0% | |
| TGCAGGTATCAGGTATGTAT+AGG | + | chr1_3:38401893-38401912 | Msa0117460:intron | 40.0% | |
| ! | GTTTAGGTTCAGTTCAGGTT+AGG | - | chr1_3:38402020-38402039 | None:intergenic | 40.0% |
| ! | TTGCAGTTTAGGTTCAGTTC+AGG | - | chr1_3:38402025-38402044 | None:intergenic | 40.0% |
| CAGTTCAGTTCTTGCAGTTT+AGG | - | chr1_3:38402036-38402055 | None:intergenic | 40.0% | |
| TCTCAGAAGACTTATTGTGC+AGG | + | chr1_3:38402139-38402158 | Msa0117460:intron | 40.0% | |
| ! | GATTTTCCTTGCCGTATTCT+TGG | - | chr1_3:38402230-38402249 | None:intergenic | 40.0% |
| CCATGGTACAGAACTCTAAT+TGG | - | chr1_3:38402252-38402271 | None:intergenic | 40.0% | |
| CCAATTAGAGTTCTGTACCA+TGG | + | chr1_3:38402249-38402268 | Msa0117460:CDS | 40.0% | |
| CATCATAATGACCAAACCCA+TGG | - | chr1_3:38402269-38402288 | None:intergenic | 40.0% | |
| ! | GACTTAGGACCCTTCTTTTT+AGG | - | chr1_3:38402303-38402322 | None:intergenic | 40.0% |
| AAATGCTAGAGTCGTGACTT+AGG | - | chr1_3:38402318-38402337 | None:intergenic | 40.0% | |
| GGAATTCTCTATACTTGCCT+AGG | - | chr1_3:38402443-38402462 | None:intergenic | 40.0% | |
| AAAGGGGAAGCAGAGTTGTA+AGG | - | chr1_3:38398127-38398146 | None:intergenic | 45.0% | |
| CTCACGATAAGCTGAAAAGC+TGG | + | chr1_3:38398511-38398530 | Msa0117460:intron | 45.0% | |
| ATCTAACCGTTCCGTTTCCA+GGG | + | chr1_3:38398545-38398564 | Msa0117460:intron | 45.0% | |
| ! | GTCAGGTTGTAGTTACCTCA+CGG | - | chr1_3:38398603-38398622 | None:intergenic | 45.0% |
| GGGTGGAACAATTCTTTGTC+AGG | - | chr1_3:38398620-38398639 | None:intergenic | 45.0% | |
| GACAAAGAATTGTTCCACCC+AGG | + | chr1_3:38398620-38398639 | Msa0117460:intron | 45.0% | |
| AATTGTTCCACCCAGGAAGA+TGG | + | chr1_3:38398627-38398646 | Msa0117460:intron | 45.0% | |
| CCCTGCAAGATTGTACAATG+TGG | + | chr1_3:38398753-38398772 | Msa0117460:intron | 45.0% | |
| ! | TGAAGGGAAGATGTGGATTG+AGG | + | chr1_3:38399089-38399108 | Msa0117460:intron | 45.0% |
| GGAAAAAGAGGACAGTTGGT+TGG | - | chr1_3:38399151-38399170 | None:intergenic | 45.0% | |
| !! | AGTTTTTCAGATGTCACGCC+TGG | + | chr1_3:38399245-38399264 | Msa0117460:intron | 45.0% |
| !!! | TGTCACGCCTGGTCATTTTT+TGG | + | chr1_3:38399256-38399275 | Msa0117460:intron | 45.0% |
| GACTTACGTTTCCATTGCAC+TGG | + | chr1_3:38399460-38399479 | Msa0117460:intron | 45.0% | |
| !! | TCCATTGCACTGGTTCTCTA+CGG | + | chr1_3:38399470-38399489 | Msa0117460:intron | 45.0% |
| AAGTGAAGAGGAGATTCCTC+GGG | - | chr1_3:38399720-38399739 | None:intergenic | 45.0% | |
| TGAATGCCCGATCTGAAAAC+TGG | - | chr1_3:38399747-38399766 | None:intergenic | 45.0% | |
| ATGGGCCAAACAATAAGAGG+AGG | + | chr1_3:38399821-38399840 | Msa0117460:CDS | 45.0% | |
| ! | GCTTAGAGAAGCATGATCCA+AGG | - | chr1_3:38399850-38399869 | None:intergenic | 45.0% |
| !! | AAGTTCTGAACCTGCACATG+CGG | + | chr1_3:38400075-38400094 | Msa0117460:CDS | 45.0% |
| !! | TAATTTGCTTCCGCATGTGC+AGG | - | chr1_3:38400088-38400107 | None:intergenic | 45.0% |
| GCACATGCGGAAGCAAATTA+TGG | + | chr1_3:38400088-38400107 | Msa0117460:CDS | 45.0% | |
| ! | CAACCAGTTTTCACAGCAGT+TGG | - | chr1_3:38400252-38400271 | None:intergenic | 45.0% |
| TAAAATCGGACTGAACCGGA+CGG | - | chr1_3:38400340-38400359 | None:intergenic | 45.0% | |
| ATGTTTCGCTCAGTTGCTCA+CGG | + | chr1_3:38400534-38400553 | Msa0117460:CDS | 45.0% | |
| ! | CTCTCTCTGAAAGCTTTCAC+TGG | - | chr1_3:38400589-38400608 | None:intergenic | 45.0% |
| ! | AGCAGATGATTTACGGGCTA+AGG | + | chr1_3:38400611-38400630 | Msa0117460:CDS | 45.0% |
| AGTGTAGAAACCCTCTTCCT+TGG | + | chr1_3:38400675-38400694 | Msa0117460:intron | 45.0% | |
| AGTCATTCTGTGTCGTGTCT+AGG | + | chr1_3:38400850-38400869 | Msa0117460:intron | 45.0% | |
| GGAATATTTGGACGCCAAGT+AGG | - | chr1_3:38401112-38401131 | None:intergenic | 45.0% | |
| CGGTTTGACACTAACTGATG+TGG | - | chr1_3:38401389-38401408 | None:intergenic | 45.0% | |
| GATGTGGAGTGAGAAAGTAG+TGG | - | chr1_3:38401522-38401541 | None:intergenic | 45.0% | |
| GAATAAGGAAGCCTCATGTG+TGG | + | chr1_3:38401783-38401802 | Msa0117460:CDS | 45.0% | |
| ATAAGGAAGCCTCATGTGTG+GGG | + | chr1_3:38401785-38401804 | Msa0117460:CDS | 45.0% | |
| TACATGTATGATCGGGAAGC+TGG | + | chr1_3:38402177-38402196 | Msa0117460:CDS | 45.0% | |
| GCTGAGTATGGCCAAGAATA+CGG | + | chr1_3:38402216-38402235 | Msa0117460:CDS | 45.0% | |
| AGAGTTCTGTACCATGGGTT+TGG | + | chr1_3:38402255-38402274 | Msa0117460:CDS | 45.0% | |
| TAAAAACCGGCCTTTAGCTG+AGG | + | chr1_3:38402536-38402555 | Msa0117460:three_prime_UTR | 45.0% | |
| TGTATTCCTCAGCTAAAGGC+CGG | - | chr1_3:38402545-38402564 | None:intergenic | 45.0% | |
| !!! | TTTTTTAATTTATTTTAAAC+GGG | + | chr1_3:38398399-38398418 | Msa0117460:intron | 5.0% |
| !!! | TTTTTTTAATATAGAAAAAT+GGG | - | chr1_3:38399172-38399191 | None:intergenic | 5.0% |
| CTGGAAACGGAACGGTTAGA+TGG | - | chr1_3:38398546-38398565 | None:intergenic | 50.0% | |
| CATCTAACCGTTCCGTTTCC+AGG | + | chr1_3:38398544-38398563 | Msa0117460:intron | 50.0% | |
| TCTAACCGTTCCGTTTCCAG+GGG | + | chr1_3:38398546-38398565 | Msa0117460:intron | 50.0% | |
| AAGGGGGGACTATGGTAATC+CGG | + | chr1_3:38398570-38398589 | Msa0117460:intron | 50.0% | |
| TAATCCGGAGTTCAACCGTG+AGG | + | chr1_3:38398585-38398604 | Msa0117460:intron | 50.0% | |
| GTTACCTCACGGTTGAACTC+CGG | - | chr1_3:38398592-38398611 | None:intergenic | 50.0% | |
| TCCGTAGAGAACCAGTGCAA+TGG | - | chr1_3:38399474-38399493 | None:intergenic | 50.0% | |
| ATGCCCGATCTGAAAACTGG+AGG | - | chr1_3:38399744-38399763 | None:intergenic | 50.0% | |
| CAACCAACAAGTGAACCGTC+CGG | + | chr1_3:38400322-38400341 | Msa0117460:intron | 50.0% | |
| ! | GGTACTGAGCAGGAATTCCT+GGG | + | chr1_3:38400499-38400518 | Msa0117460:intron | 50.0% |
| GTACTGAGCAGGAATTCCTG+GGG | + | chr1_3:38400500-38400519 | Msa0117460:intron | 50.0% | |
| AACATGCATCTTCCATCCCC+AGG | - | chr1_3:38400519-38400538 | None:intergenic | 50.0% | |
| TGTTTCGCTCAGTTGCTCAC+GGG | + | chr1_3:38400535-38400554 | Msa0117460:CDS | 50.0% | |
| TGAAAGCTTTCACTGGGAGG+CGG | - | chr1_3:38400582-38400601 | None:intergenic | 50.0% | |
| ! | CTCTGAAAGCTTTCACTGGG+AGG | - | chr1_3:38400585-38400604 | None:intergenic | 50.0% |
| TTCATGGCTGCCAAGGAAGA+GGG | - | chr1_3:38400688-38400707 | None:intergenic | 50.0% | |
| TTTCATGGCTGCCAAGGAAG+AGG | - | chr1_3:38400689-38400708 | None:intergenic | 50.0% | |
| ! | GGTAAAAGGGGTGCGTTTCA+TGG | - | chr1_3:38401231-38401250 | None:intergenic | 50.0% |
| ! | AAGTAGTGGGAGGGAAGATG+AGG | - | chr1_3:38401508-38401527 | None:intergenic | 50.0% |
| ! | GGAGTGAGAAAGTAGTGGGA+GGG | - | chr1_3:38401517-38401536 | None:intergenic | 50.0% |
| ! | TGGAGTGAGAAAGTAGTGGG+AGG | - | chr1_3:38401518-38401537 | None:intergenic | 50.0% |
| ATGTATGATCGGGAAGCTGG+TGG | + | chr1_3:38402180-38402199 | Msa0117460:CDS | 50.0% | |
| GTATGGCCAAGAATACGGCA+AGG | + | chr1_3:38402221-38402240 | Msa0117460:CDS | 50.0% | |
| CCTTTCCCCTGGAAACGGAA+CGG | - | chr1_3:38398554-38398573 | None:intergenic | 55.0% | |
| CGTTCCGTTTCCAGGGGAAA+GGG | + | chr1_3:38398552-38398571 | Msa0117460:intron | 55.0% | |
| GTTCCGTTTCCAGGGGAAAG+GGG | + | chr1_3:38398553-38398572 | Msa0117460:intron | 55.0% | |
| TTCCGTTTCCAGGGGAAAGG+GGG | + | chr1_3:38398554-38398573 | Msa0117460:intron | 55.0% | |
| GCTTGTTCCATCTTCCTGGG+TGG | - | chr1_3:38398637-38398656 | None:intergenic | 55.0% | |
| ATCTGCAGTCTTCAGACCCG+AGG | + | chr1_3:38399701-38399720 | Msa0117460:CDS | 55.0% | |
| CCAACTGATGCACAACTGCG+TGG | - | chr1_3:38400025-38400044 | None:intergenic | 55.0% | |
| CCACGCAGTTGTGCATCAGT+TGG | + | chr1_3:38400022-38400041 | Msa0117460:CDS | 55.0% | |
| GAACCGGACGGTTCACTTGT+TGG | - | chr1_3:38400328-38400347 | None:intergenic | 55.0% | |
| ! | CGGTACTGAGCAGGAATTCC+TGG | + | chr1_3:38400498-38400517 | Msa0117460:intron | 55.0% |
| TGAGCAGGAATTCCTGGGGA+TGG | + | chr1_3:38400504-38400523 | Msa0117460:intron | 55.0% | |
| GTTTCGCTCAGTTGCTCACG+GGG | + | chr1_3:38400536-38400555 | Msa0117460:CDS | 55.0% | |
| ! | TTGCTCACGGGGCTTGTTTG+AGG | + | chr1_3:38400547-38400566 | Msa0117460:CDS | 55.0% |
| CCGTTCCGTTTCCAGGGGAA+AGG | + | chr1_3:38398551-38398570 | Msa0117460:intron | 60.0% | |
| TCCGTTTCCAGGGGAAAGGG+GGG | + | chr1_3:38398555-38398574 | Msa0117460:intron | 60.0% | |
| TCCCCCCTTTCCCCTGGAAA+CGG | - | chr1_3:38398559-38398578 | None:intergenic | 60.0% | |
| ! | CACGGGGCTTGTTTGAGGTC+AGG | + | chr1_3:38400552-38400571 | Msa0117460:CDS | 60.0% |
| AGGAAGCCTCATGTGTGGGG+AGG | + | chr1_3:38401788-38401807 | Msa0117460:CDS | 60.0% | |
| CCATAGTCCCCCCTTTCCCC+TGG | - | chr1_3:38398565-38398584 | None:intergenic | 65.0% | |
| CCAGGGGAAAGGGGGGACTA+TGG | + | chr1_3:38398562-38398581 | Msa0117460:intron | 65.0% | |
| GGTTCGCCTCCCCACACATG+AGG | - | chr1_3:38401797-38401816 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_3 | gene | 38397994 | 38402604 | 38397994 | ID=Msa0117460;Name=Msa0117460 |
| chr1_3 | mRNA | 38397994 | 38402604 | 38397994 | ID=Msa0117460-mRNA-1;Parent=Msa0117460;Name=Msa0117460-mRNA-1;_AED=0.25;_eAED=0.25;_QI=184|1|1|1|0.8|0.66|6|272|337 |
| chr1_3 | exon | 38397994 | 38398166 | 38397994 | ID=Msa0117460-mRNA-1:exon:12029;Parent=Msa0117460-mRNA-1 |
| chr1_3 | exon | 38399606 | 38400196 | 38399606 | ID=Msa0117460-mRNA-1:exon:12030;Parent=Msa0117460-mRNA-1 |
| chr1_3 | exon | 38400511 | 38400632 | 38400511 | ID=Msa0117460-mRNA-1:exon:12031;Parent=Msa0117460-mRNA-1 |
| chr1_3 | exon | 38400909 | 38400949 | 38400909 | ID=Msa0117460-mRNA-1:exon:12032;Parent=Msa0117460-mRNA-1 |
| chr1_3 | exon | 38401748 | 38401846 | 38401748 | ID=Msa0117460-mRNA-1:exon:12033;Parent=Msa0117460-mRNA-1 |
| chr1_3 | exon | 38402161 | 38402604 | 38402161 | ID=Msa0117460-mRNA-1:exon:12034;Parent=Msa0117460-mRNA-1 |
| chr1_3 | five_prime_UTR | 38397994 | 38398166 | 38397994 | ID=Msa0117460-mRNA-1:five_prime_utr;Parent=Msa0117460-mRNA-1 |
| chr1_3 | five_prime_UTR | 38399606 | 38399616 | 38399606 | ID=Msa0117460-mRNA-1:five_prime_utr;Parent=Msa0117460-mRNA-1 |
| chr1_3 | CDS | 38399617 | 38400196 | 38399617 | ID=Msa0117460-mRNA-1:cds;Parent=Msa0117460-mRNA-1 |
| chr1_3 | CDS | 38400511 | 38400632 | 38400511 | ID=Msa0117460-mRNA-1:cds;Parent=Msa0117460-mRNA-1 |
| chr1_3 | CDS | 38400909 | 38400949 | 38400909 | ID=Msa0117460-mRNA-1:cds;Parent=Msa0117460-mRNA-1 |
| chr1_3 | CDS | 38401748 | 38401846 | 38401748 | ID=Msa0117460-mRNA-1:cds;Parent=Msa0117460-mRNA-1 |
| chr1_3 | CDS | 38402161 | 38402332 | 38402161 | ID=Msa0117460-mRNA-1:cds;Parent=Msa0117460-mRNA-1 |
| chr1_3 | three_prime_UTR | 38402333 | 38402604 | 38402333 | ID=Msa0117460-mRNA-1:three_prime_utr;Parent=Msa0117460-mRNA-1 |
| Gene Sequence |
| Protein sequence |
