Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1361200 | XP_003630148.1 | 93.902 | 82 | 5 | 0 | 1 | 82 | 1 | 82 | 2.19e-40 | 137 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1361200 | G7LC65 | 93.902 | 82 | 5 | 0 | 1 | 82 | 1 | 82 | 1.04e-40 | 137 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0004340 | Msa1361200 | 0.822718 | 2.039093e-53 | -8.615850e-47 |
| Msa0006050 | Msa1361200 | 0.850090 | 2.125477e-60 | -8.615850e-47 |
| Msa0006700 | Msa1361200 | 0.808932 | 2.428646e-50 | -8.615850e-47 |
| Msa0020630 | Msa1361200 | 0.804658 | 1.943780e-49 | -8.615850e-47 |
| Msa0026930 | Msa1361200 | 0.834725 | 2.538775e-56 | -8.615850e-47 |
| Msa0036150 | Msa1361200 | 0.825432 | 4.703179e-54 | -8.615850e-47 |
| Msa0038310 | Msa1361200 | 0.809268 | 2.057964e-50 | -8.615850e-47 |
| Msa0040410 | Msa1361200 | 0.841758 | 3.912535e-58 | -8.615850e-47 |
| Msa0040550 | Msa1361200 | -0.826729 | 2.312159e-54 | -8.615850e-47 |
| Msa0053480 | Msa1361200 | 0.802294 | 6.007121e-49 | -8.615850e-47 |
| Msa0054760 | Msa1361200 | 0.815010 | 1.150769e-51 | -8.615850e-47 |
| Msa0056130 | Msa1361200 | 0.802061 | 6.709062e-49 | -8.615850e-47 |
| Msa0056160 | Msa1361200 | 0.811874 | 5.629019e-51 | -8.615850e-47 |
| Msa0059880 | Msa1361200 | -0.801029 | 1.091879e-48 | -8.615850e-47 |
| Msa0064550 | Msa1361200 | 0.846232 | 2.471946e-59 | -8.615850e-47 |
| Msa0072710 | Msa1361200 | 0.821149 | 4.708584e-53 | -8.615850e-47 |
| Msa0072830 | Msa1361200 | 0.854220 | 1.423166e-61 | -8.615850e-47 |
| Msa0072860 | Msa1361200 | 0.856923 | 2.315886e-62 | -8.615850e-47 |
| Msa0074760 | Msa1361200 | 0.803536 | 3.326415e-49 | -8.615850e-47 |
| Msa0074780 | Msa1361200 | 0.832408 | 9.613785e-56 | -8.615850e-47 |
| Msa0079690 | Msa1361200 | 0.820660 | 6.099738e-53 | -8.615850e-47 |
| Msa0096510 | Msa1361200 | 0.805443 | 1.331834e-49 | -8.615850e-47 |
| Msa0104360 | Msa1361200 | 0.846335 | 2.317660e-59 | -8.615850e-47 |
| Msa0109490 | Msa1361200 | 0.839533 | 1.496951e-57 | -8.615850e-47 |
| Msa0116510 | Msa1361200 | 0.815334 | 9.751096e-52 | -8.615850e-47 |
| Msa1349640 | Msa1361200 | 0.813922 | 2.002562e-51 | -8.615850e-47 |
| Msa1349810 | Msa1361200 | 0.825137 | 5.521763e-54 | -8.615850e-47 |
| Msa1356730 | Msa1361200 | 0.808492 | 3.016063e-50 | -8.615850e-47 |
| Msa1359620 | Msa1361200 | 0.805322 | 1.412044e-49 | -8.615850e-47 |
| Msa1361190 | Msa1361200 | 0.861239 | 1.179582e-63 | -8.615850e-47 |
| Msa1361200 | Msa1373950 | 0.821164 | 4.669972e-53 | -8.615850e-47 |
| Msa1361200 | Msa1384620 | 0.802304 | 5.977990e-49 | -8.615850e-47 |
| Msa1361200 | Msa1384980 | 0.809974 | 1.451222e-50 | -8.615850e-47 |
| Msa1361200 | Msa1386020 | 0.863476 | 2.422070e-64 | -8.615850e-47 |
| Msa1361200 | Msa1386250 | 0.816658 | 4.936023e-52 | -8.615850e-47 |
| Msa1361200 | Msa1388230 | 0.800001 | 1.768654e-48 | -8.615850e-47 |
| Msa1361200 | Msa1397540 | 0.800571 | 1.354292e-48 | -8.615850e-47 |
| Msa1361200 | Msa1403700 | 0.803121 | 4.055107e-49 | -8.615850e-47 |
| Msa1361200 | Msa1405470 | 0.801020 | 1.096595e-48 | -8.615850e-47 |
| Msa1361200 | Msa1408190 | 0.821124 | 4.770419e-53 | -8.615850e-47 |
| Msa1361200 | Msa1418200 | 0.817557 | 3.100480e-52 | -8.615850e-47 |
| Msa1361200 | Msa1431240 | 0.800012 | 1.759287e-48 | -8.615850e-47 |
| Msa1361200 | Msa1439070 | 0.801806 | 7.569249e-49 | -8.615850e-47 |
| Msa1361200 | Msa1443550 | 0.850617 | 1.512749e-60 | -8.615850e-47 |
| Msa1361200 | Msa1448990 | 0.820914 | 5.332843e-53 | -8.615850e-47 |
| Msa1361200 | Msa1450420 | 0.843411 | 1.424831e-58 | -8.615850e-47 |
| Msa1361200 | Msa1451780 | 0.808849 | 2.530376e-50 | -8.615850e-47 |
| Msa1361200 | Msa1460310 | -0.827629 | 1.407955e-54 | -8.615850e-47 |
| Msa1361200 | Msa1463500 | 0.808657 | 2.780324e-50 | -8.615850e-47 |
| Msa0604880 | Msa1361200 | 0.813872 | 2.054417e-51 | -8.615850e-47 |
| Msa0605250 | Msa1361200 | 0.803287 | 3.747157e-49 | -8.615850e-47 |
| Msa0607440 | Msa1361200 | 0.819199 | 1.316821e-52 | -8.615850e-47 |
| Msa0613480 | Msa1361200 | 0.813094 | 3.046233e-51 | -8.615850e-47 |
| Msa0618260 | Msa1361200 | 0.822387 | 2.434732e-53 | -8.615850e-47 |
| Msa0618520 | Msa1361200 | 0.851644 | 7.759771e-61 | -8.615850e-47 |
| Msa0618530 | Msa1361200 | 0.832074 | 1.163382e-55 | -8.615850e-47 |
| Msa0625440 | Msa1361200 | 0.812398 | 4.326129e-51 | -8.615850e-47 |
| Msa0627050 | Msa1361200 | 0.835330 | 1.786781e-56 | -8.615850e-47 |
| Msa0633720 | Msa1361200 | 0.806690 | 7.277190e-50 | -8.615850e-47 |
| Msa0635130 | Msa1361200 | 0.828016 | 1.136392e-54 | -8.615850e-47 |
| Msa0635350 | Msa1361200 | 0.803608 | 3.214990e-49 | -8.615850e-47 |
| Msa0646340 | Msa1361200 | 0.811091 | 8.327165e-51 | -8.615850e-47 |
| Msa0647000 | Msa1361200 | 0.810025 | 1.415204e-50 | -8.615850e-47 |
| Msa0657860 | Msa1361200 | 0.858291 | 9.114532e-63 | -8.615850e-47 |
| Msa0670360 | Msa1361200 | -0.800668 | 1.293831e-48 | -8.615850e-47 |
| Msa0675010 | Msa1361200 | 0.856591 | 2.901563e-62 | -8.615850e-47 |
| Msa0677590 | Msa1361200 | 0.811535 | 6.669943e-51 | -8.615850e-47 |
| Msa0678240 | Msa1361200 | 0.834586 | 2.751352e-56 | -8.615850e-47 |
| Msa0679780 | Msa1361200 | 0.812833 | 3.474061e-51 | -8.615850e-47 |
| Msa0681210 | Msa1361200 | 0.805523 | 1.281468e-49 | -8.615850e-47 |
| Msa0686300 | Msa1361200 | 0.805606 | 1.231101e-49 | -8.615850e-47 |
| Msa0692000 | Msa1361200 | 0.821600 | 3.704876e-53 | -8.615850e-47 |
| Msa0693400 | Msa1361200 | 0.823540 | 1.311045e-53 | -8.615850e-47 |
| Msa0702200 | Msa1361200 | 0.845781 | 3.277363e-59 | -8.615850e-47 |
| Msa0702310 | Msa1361200 | 0.823309 | 1.484940e-53 | -8.615850e-47 |
| Msa0702620 | Msa1361200 | 0.826455 | 2.687362e-54 | -8.615850e-47 |
| Msa0714020 | Msa1361200 | 0.801487 | 8.796328e-49 | -8.615850e-47 |
| Msa0716740 | Msa1361200 | -0.800972 | 1.121266e-48 | -8.615850e-47 |
| Msa0719340 | Msa1361200 | 0.815973 | 7.026809e-52 | -8.615850e-47 |
| Msa0726000 | Msa1361200 | 0.808629 | 2.819525e-50 | -8.615850e-47 |
| Msa0734760 | Msa1361200 | 0.810509 | 1.112836e-50 | -8.615850e-47 |
| Msa0744690 | Msa1361200 | 0.827131 | 1.853000e-54 | -8.615850e-47 |
| Msa0748980 | Msa1361200 | 0.809052 | 2.288833e-50 | -8.615850e-47 |
| Msa0749150 | Msa1361200 | 0.816595 | 5.099621e-52 | -8.615850e-47 |
| Msa0752580 | Msa1361200 | 0.839871 | 1.222222e-57 | -8.615850e-47 |
| Msa0754500 | Msa1361200 | 0.833035 | 6.720997e-56 | -8.615850e-47 |
| Msa0756480 | Msa1361200 | 0.849682 | 2.764236e-60 | -8.615850e-47 |
| Msa0761640 | Msa1361200 | 0.816193 | 6.274423e-52 | -8.615850e-47 |
| Msa0766030 | Msa1361200 | 0.810929 | 9.026946e-51 | -8.615850e-47 |
| Msa0772150 | Msa1361200 | 0.813844 | 2.083970e-51 | -8.615850e-47 |
| Msa0775580 | Msa1361200 | 0.852914 | 3.377363e-61 | -8.615850e-47 |
| Msa0781030 | Msa1361200 | 0.837510 | 4.982026e-57 | -8.615850e-47 |
| Msa0792510 | Msa1361200 | 0.819095 | 1.390018e-52 | -8.615850e-47 |
| Msa0792880 | Msa1361200 | 0.804157 | 2.471223e-49 | -8.615850e-47 |
| Msa0804340 | Msa1361200 | 0.800235 | 1.585128e-48 | -8.615850e-47 |
| Msa0812970 | Msa1361200 | 0.806108 | 9.651960e-50 | -8.615850e-47 |
| Msa0813030 | Msa1361200 | 0.822484 | 2.311542e-53 | -8.615850e-47 |
| Msa0813630 | Msa1361200 | 0.808609 | 2.847495e-50 | -8.615850e-47 |
| Msa0821030 | Msa1361200 | 0.825029 | 5.856176e-54 | -8.615850e-47 |
| Msa0825520 | Msa1361200 | 0.800125 | 1.668817e-48 | -8.615850e-47 |
| Msa0828570 | Msa1361200 | 0.805573 | 1.250920e-49 | -8.615850e-47 |
| Msa0828900 | Msa1361200 | 0.807858 | 4.116416e-50 | -8.615850e-47 |
| Msa0829430 | Msa1361200 | 0.815479 | 9.051902e-52 | -8.615850e-47 |
| Msa0829570 | Msa1361200 | 0.802166 | 6.383560e-49 | -8.615850e-47 |
| Msa0830900 | Msa1361200 | 0.828334 | 9.523008e-55 | -8.615850e-47 |
| Msa0835510 | Msa1361200 | 0.853509 | 2.279827e-61 | -8.615850e-47 |
| Msa0836200 | Msa1361200 | 0.809689 | 1.670886e-50 | -8.615850e-47 |
| Msa0842050 | Msa1361200 | 0.812644 | 3.822128e-51 | -8.615850e-47 |
| Msa0842270 | Msa1361200 | 0.809074 | 2.264722e-50 | -8.615850e-47 |
| Msa0127210 | Msa1361200 | 0.801802 | 7.583269e-49 | -8.615850e-47 |
| Msa0130760 | Msa1361200 | 0.808642 | 2.801082e-50 | -8.615850e-47 |
| Msa0143280 | Msa1361200 | 0.816512 | 5.322481e-52 | -8.615850e-47 |
| Msa0153440 | Msa1361200 | 0.824516 | 7.737659e-54 | -8.615850e-47 |
| Msa0154240 | Msa1361200 | 0.848219 | 7.047222e-60 | -8.615850e-47 |
| Msa0159750 | Msa1361200 | 0.808909 | 2.456107e-50 | -8.615850e-47 |
| Msa0164630 | Msa1361200 | 0.821302 | 4.339387e-53 | -8.615850e-47 |
| Msa0168390 | Msa1361200 | 0.824226 | 9.053282e-54 | -8.615850e-47 |
| Msa0173370 | Msa1361200 | 0.804011 | 2.650192e-49 | -8.615850e-47 |
| Msa0179260 | Msa1361200 | 0.813994 | 1.931281e-51 | -8.615850e-47 |
| Msa0199740 | Msa1361200 | 0.824265 | 8.863556e-54 | -8.615850e-47 |
| Msa0213080 | Msa1361200 | 0.801078 | 1.066762e-48 | -8.615850e-47 |
| Msa0217470 | Msa1361200 | 0.834323 | 3.202487e-56 | -8.615850e-47 |
| Msa0232860 | Msa1361200 | 0.836218 | 1.064356e-56 | -8.615850e-47 |
| Msa1225820 | Msa1361200 | 0.816285 | 5.982000e-52 | -8.615850e-47 |
| Msa1226600 | Msa1361200 | 0.817926 | 2.559498e-52 | -8.615850e-47 |
| Msa1228280 | Msa1361200 | 0.817790 | 2.746617e-52 | -8.615850e-47 |
| Msa1228330 | Msa1361200 | 0.816100 | 6.580205e-52 | -8.615850e-47 |
| Msa1233770 | Msa1361200 | 0.842167 | 3.050335e-58 | -8.615850e-47 |
| Msa1237260 | Msa1361200 | 0.822186 | 2.710551e-53 | -8.615850e-47 |
| Msa1243130 | Msa1361200 | 0.804226 | 2.391160e-49 | -8.615850e-47 |
| Msa1243730 | Msa1361200 | 0.840350 | 9.168380e-58 | -8.615850e-47 |
| Msa1249410 | Msa1361200 | 0.831951 | 1.247593e-55 | -8.615850e-47 |
| Msa1258280 | Msa1361200 | 0.819681 | 1.021971e-52 | -8.615850e-47 |
| Msa1272950 | Msa1361200 | 0.805695 | 1.179140e-49 | -8.615850e-47 |
| Msa1276080 | Msa1361200 | 0.833866 | 4.169475e-56 | -8.615850e-47 |
| Msa1278420 | Msa1361200 | 0.804501 | 2.095583e-49 | -8.615850e-47 |
| Msa1279330 | Msa1361200 | 0.809932 | 1.481971e-50 | -8.615850e-47 |
| Msa1279860 | Msa1361200 | 0.838638 | 2.553727e-57 | -8.615850e-47 |
| Msa1279870 | Msa1361200 | 0.817499 | 3.194877e-52 | -8.615850e-47 |
| Msa1280020 | Msa1361200 | 0.820273 | 7.483401e-53 | -8.615850e-47 |
| Msa1287690 | Msa1361200 | 0.828350 | 9.442376e-55 | -8.615850e-47 |
| Msa1296650 | Msa1361200 | 0.805987 | 1.023475e-49 | -8.615850e-47 |
| Msa1297720 | Msa1361200 | 0.830718 | 2.508366e-55 | -8.615850e-47 |
| Msa1298290 | Msa1361200 | 0.818036 | 2.417338e-52 | -8.615850e-47 |
| Msa1306190 | Msa1361200 | 0.816739 | 4.734655e-52 | -8.615850e-47 |
| Msa1306200 | Msa1361200 | 0.847960 | 8.309064e-60 | -8.615850e-47 |
| Msa1311150 | Msa1361200 | 0.803669 | 3.121440e-49 | -8.615850e-47 |
| Msa1317710 | Msa1361200 | 0.838366 | 3.001803e-57 | -8.615850e-47 |
| Msa1326000 | Msa1361200 | 0.827422 | 1.578312e-54 | -8.615850e-47 |
| Msa1326400 | Msa1361200 | 0.803493 | 3.396001e-49 | -8.615850e-47 |
| Msa1329740 | Msa1361200 | -0.809240 | 2.086226e-50 | -8.615850e-47 |
| Msa0365360 | Msa1361200 | 0.820970 | 5.175576e-53 | -8.615850e-47 |
| Msa0365870 | Msa1361200 | 0.832525 | 8.996031e-56 | -8.615850e-47 |
| Msa0367310 | Msa1361200 | 0.816810 | 4.563323e-52 | -8.615850e-47 |
| Msa0371610 | Msa1361200 | 0.825511 | 4.505510e-54 | -8.615850e-47 |
| Msa0376480 | Msa1361200 | 0.800183 | 1.624344e-48 | -8.615850e-47 |
| Msa0377280 | Msa1361200 | 0.809245 | 2.081712e-50 | -8.615850e-47 |
| Msa0380430 | Msa1361200 | 0.802030 | 6.805933e-49 | -8.615850e-47 |
| Msa0387970 | Msa1361200 | 0.804849 | 1.773383e-49 | -8.615850e-47 |
| Msa0389050 | Msa1361200 | 0.825498 | 4.537012e-54 | -8.615850e-47 |
| Msa0389060 | Msa1361200 | 0.863156 | 3.043326e-64 | -8.615850e-47 |
| Msa0392050 | Msa1361200 | 0.820211 | 7.732081e-53 | -8.615850e-47 |
| Msa0401340 | Msa1361200 | 0.815391 | 9.470459e-52 | -8.615850e-47 |
| Msa0404690 | Msa1361200 | 0.829295 | 5.576054e-55 | -8.615850e-47 |
| Msa0409820 | Msa1361200 | 0.821064 | 4.924775e-53 | -8.615850e-47 |
| Msa0411560 | Msa1361200 | 0.812793 | 3.545174e-51 | -8.615850e-47 |
| Msa0412540 | Msa1361200 | 0.805589 | 1.240890e-49 | -8.615850e-47 |
| Msa0413740 | Msa1361200 | 0.827121 | 1.863257e-54 | -8.615850e-47 |
| Msa0414070 | Msa1361200 | 0.803876 | 2.827092e-49 | -8.615850e-47 |
| Msa0423590 | Msa1361200 | 0.820142 | 8.020283e-53 | -8.615850e-47 |
| Msa0423600 | Msa1361200 | 0.847038 | 1.488399e-59 | -8.615850e-47 |
| Msa0440310 | Msa1361200 | 0.803863 | 2.845550e-49 | -8.615850e-47 |
| Msa0448120 | Msa1361200 | 0.832576 | 8.734514e-56 | -8.615850e-47 |
| Msa0450460 | Msa1361200 | 0.806878 | 6.642378e-50 | -8.615850e-47 |
| Msa0455260 | Msa1361200 | 0.813905 | 2.019709e-51 | -8.615850e-47 |
| Msa0457380 | Msa1361200 | 0.821550 | 3.803666e-53 | -8.615850e-47 |
| Msa0458790 | Msa1361200 | 0.808736 | 2.674843e-50 | -8.615850e-47 |
| Msa0459120 | Msa1361200 | 0.808875 | 2.498106e-50 | -8.615850e-47 |
| Msa0469950 | Msa1361200 | 0.820536 | 6.511698e-53 | -8.615850e-47 |
| Msa0470650 | Msa1361200 | 0.839363 | 1.656777e-57 | -8.615850e-47 |
| Msa0473530 | Msa1361200 | 0.815747 | 7.888756e-52 | -8.615850e-47 |
| Msa0475740 | Msa1361200 | 0.817809 | 2.719342e-52 | -8.615850e-47 |
| Msa0476490 | Msa1361200 | 0.801426 | 9.057036e-49 | -8.615850e-47 |
| Msa0980980 | Msa1361200 | 0.802976 | 4.345200e-49 | -8.615850e-47 |
| Msa0984000 | Msa1361200 | 0.837703 | 4.444561e-57 | -8.615850e-47 |
| Msa0985430 | Msa1361200 | 0.807827 | 4.179451e-50 | -8.615850e-47 |
| Msa1004210 | Msa1361200 | 0.815046 | 1.130028e-51 | -8.615850e-47 |
| Msa1004260 | Msa1361200 | 0.824177 | 9.296272e-54 | -8.615850e-47 |
| Msa1009170 | Msa1361200 | 0.812108 | 5.005513e-51 | -8.615850e-47 |
| Msa1014350 | Msa1361200 | 0.873153 | 1.833406e-67 | -8.615850e-47 |
| Msa1016670 | Msa1361200 | 0.803342 | 3.649849e-49 | -8.615850e-47 |
| Msa1026610 | Msa1361200 | 0.847324 | 1.243143e-59 | -8.615850e-47 |
| Msa1026880 | Msa1361200 | 0.808732 | 2.680193e-50 | -8.615850e-47 |
| Msa1044040 | Msa1361200 | 0.814554 | 1.451932e-51 | -8.615850e-47 |
| Msa1044790 | Msa1361200 | 0.803952 | 2.726407e-49 | -8.615850e-47 |
| Msa1046610 | Msa1361200 | 0.814662 | 1.374461e-51 | -8.615850e-47 |
| Msa1055360 | Msa1361200 | 0.854103 | 1.538034e-61 | -8.615850e-47 |
| Msa1061130 | Msa1361200 | 0.813589 | 2.371707e-51 | -8.615850e-47 |
| Msa1061520 | Msa1361200 | 0.828447 | 8.945739e-55 | -8.615850e-47 |
| Msa1064210 | Msa1361200 | 0.812308 | 4.525775e-51 | -8.615850e-47 |
| Msa1073500 | Msa1361200 | 0.806481 | 8.054163e-50 | -8.615850e-47 |
| Msa1076520 | Msa1361200 | 0.816377 | 5.705173e-52 | -8.615850e-47 |
| Msa1076680 | Msa1361200 | 0.802532 | 5.365429e-49 | -8.615850e-47 |
| Msa1081600 | Msa1361200 | 0.806734 | 7.124579e-50 | -8.615850e-47 |
| Msa1081700 | Msa1361200 | 0.836116 | 1.129710e-56 | -8.615850e-47 |
| Msa1081850 | Msa1361200 | 0.800105 | 1.684720e-48 | -8.615850e-47 |
| Msa1082150 | Msa1361200 | 0.814588 | 1.427069e-51 | -8.615850e-47 |
| Msa1093390 | Msa1361200 | 0.874640 | 5.764677e-68 | -8.615850e-47 |
| Msa1102170 | Msa1361200 | 0.811967 | 5.371186e-51 | -8.615850e-47 |
| Msa1105850 | Msa1361200 | 0.818102 | 2.335022e-52 | -8.615850e-47 |
| Msa1106320 | Msa1361200 | 0.814944 | 1.190113e-51 | -8.615850e-47 |
| Msa0242290 | Msa1361200 | 0.814808 | 1.276068e-51 | -8.615850e-47 |
| Msa0251140 | Msa1361200 | 0.814528 | 1.471746e-51 | -8.615850e-47 |
| Msa0260190 | Msa1361200 | 0.843284 | 1.540245e-58 | -8.615850e-47 |
| Msa0264940 | Msa1361200 | -0.827049 | 1.938389e-54 | -8.615850e-47 |
| Msa0267120 | Msa1361200 | 0.807090 | 5.988953e-50 | -8.615850e-47 |
| Msa0272420 | Msa1361200 | 0.862414 | 5.155380e-64 | -8.615850e-47 |
| Msa0282860 | Msa1361200 | 0.800991 | 1.111508e-48 | -8.615850e-47 |
| Msa0295570 | Msa1361200 | 0.833770 | 4.405392e-56 | -8.615850e-47 |
| Msa0296610 | Msa1361200 | 0.820090 | 8.239604e-53 | -8.615850e-47 |
| Msa0302990 | Msa1361200 | -0.828523 | 8.573233e-55 | -8.615850e-47 |
| Msa0305860 | Msa1361200 | 0.817871 | 2.633415e-52 | -8.615850e-47 |
| Msa0312570 | Msa1361200 | 0.854902 | 9.032951e-62 | -8.615850e-47 |
| Msa0312780 | Msa1361200 | 0.817102 | 3.924494e-52 | -8.615850e-47 |
| Msa0323630 | Msa1361200 | 0.811521 | 6.717108e-51 | -8.615850e-47 |
| Msa0334980 | Msa1361200 | 0.837762 | 4.293819e-57 | -8.615850e-47 |
| Msa0336270 | Msa1361200 | 0.812763 | 3.599291e-51 | -8.615850e-47 |
| Msa0344680 | Msa1361200 | 0.819364 | 1.207088e-52 | -8.615850e-47 |
| Msa0354390 | Msa1361200 | 0.801718 | 7.890730e-49 | -8.615850e-47 |
| Msa0357380 | Msa1361200 | 0.818090 | 2.349368e-52 | -8.615850e-47 |
| Msa1108140 | Msa1361200 | 0.819033 | 1.436315e-52 | -8.615850e-47 |
| Msa1109890 | Msa1361200 | -0.802800 | 4.723828e-49 | -8.615850e-47 |
| Msa1113210 | Msa1361200 | 0.805148 | 1.535096e-49 | -8.615850e-47 |
| Msa1122720 | Msa1361200 | 0.805335 | 1.402600e-49 | -8.615850e-47 |
| Msa1125450 | Msa1361200 | 0.808274 | 3.356094e-50 | -8.615850e-47 |
| Msa1126170 | Msa1361200 | 0.802056 | 6.722151e-49 | -8.615850e-47 |
| Msa1130650 | Msa1361200 | 0.800524 | 1.384386e-48 | -8.615850e-47 |
| Msa1133180 | Msa1361200 | 0.806497 | 7.994235e-50 | -8.615850e-47 |
| Msa1138450 | Msa1361200 | 0.847023 | 1.502943e-59 | -8.615850e-47 |
| Msa1138480 | Msa1361200 | 0.805965 | 1.034495e-49 | -8.615850e-47 |
| Msa1140010 | Msa1361200 | 0.814676 | 1.364428e-51 | -8.615850e-47 |
| Msa1144730 | Msa1361200 | 0.819448 | 1.155325e-52 | -8.615850e-47 |
| Msa1151820 | Msa1361200 | 0.800436 | 1.442827e-48 | -8.615850e-47 |
| Msa1161160 | Msa1361200 | 0.809769 | 1.605996e-50 | -8.615850e-47 |
| Msa1164570 | Msa1361200 | 0.811345 | 7.332345e-51 | -8.615850e-47 |
| Msa1166370 | Msa1361200 | 0.803428 | 3.502442e-49 | -8.615850e-47 |
| Msa1173380 | Msa1361200 | 0.837992 | 3.745822e-57 | -8.615850e-47 |
| Msa1177620 | Msa1361200 | 0.810925 | 9.043530e-51 | -8.615850e-47 |
| Msa1181730 | Msa1361200 | 0.825747 | 3.960010e-54 | -8.615850e-47 |
| Msa1182480 | Msa1361200 | 0.804796 | 1.818772e-49 | -8.615850e-47 |
| Msa1182800 | Msa1361200 | 0.873701 | 1.199149e-67 | -8.615850e-47 |
| Msa1182830 | Msa1361200 | 0.875037 | 4.223516e-68 | -8.615850e-47 |
| Msa1184050 | Msa1361200 | 0.801559 | 8.503550e-49 | -8.615850e-47 |
| Msa1184640 | Msa1361200 | 0.808257 | 3.385699e-50 | -8.615850e-47 |
| Msa1191390 | Msa1361200 | 0.803813 | 2.914333e-49 | -8.615850e-47 |
| Msa1192150 | Msa1361200 | 0.810198 | 1.298858e-50 | -8.615850e-47 |
| Msa1193400 | Msa1361200 | 0.850704 | 1.429460e-60 | -8.615850e-47 |
| Msa1193430 | Msa1361200 | 0.837628 | 4.645904e-57 | -8.615850e-47 |
| Msa1204430 | Msa1361200 | 0.819454 | 1.151960e-52 | -8.615850e-47 |
| Msa1205520 | Msa1361200 | 0.804508 | 2.088449e-49 | -8.615850e-47 |
| Msa1205560 | Msa1361200 | 0.816632 | 5.002204e-52 | -8.615850e-47 |
| Msa1209790 | Msa1361200 | 0.809181 | 2.147995e-50 | -8.615850e-47 |
| Msa1212740 | Msa1361200 | 0.809253 | 2.073563e-50 | -8.615850e-47 |
| Msa1216600 | Msa1361200 | -0.809653 | 1.701676e-50 | -8.615850e-47 |
| Msa0486530 | Msa1361200 | 0.829079 | 6.291646e-55 | -8.615850e-47 |
| Msa0504630 | Msa1361200 | 0.815727 | 7.973188e-52 | -8.615850e-47 |
| Msa0505390 | Msa1361200 | 0.828509 | 8.640123e-55 | -8.615850e-47 |
| Msa0505660 | Msa1361200 | 0.823834 | 1.118870e-53 | -8.615850e-47 |
| Msa0511890 | Msa1361200 | 0.803655 | 3.143081e-49 | -8.615850e-47 |
| Msa0515680 | Msa1361200 | 0.824010 | 1.017578e-53 | -8.615850e-47 |
| Msa0515830 | Msa1361200 | 0.806702 | 7.235959e-50 | -8.615850e-47 |
| Msa0530340 | Msa1361200 | 0.828992 | 6.602459e-55 | -8.615850e-47 |
| Msa0530930 | Msa1361200 | 0.816689 | 4.859450e-52 | -8.615850e-47 |
| Msa0535020 | Msa1361200 | 0.831654 | 1.477061e-55 | -8.615850e-47 |
| Msa0535050 | Msa1361200 | 0.830986 | 2.155976e-55 | -8.615850e-47 |
| Msa0535570 | Msa1361200 | -0.800938 | 1.139709e-48 | -8.615850e-47 |
| Msa0539320 | Msa1361200 | 0.826563 | 2.532841e-54 | -8.615850e-47 |
| Msa0540840 | Msa1361200 | 0.814819 | 1.268449e-51 | -8.615850e-47 |
| Msa0545230 | Msa1361200 | 0.844547 | 7.067929e-59 | -8.615850e-47 |
| Msa0546080 | Msa1361200 | 0.810198 | 1.298527e-50 | -8.615850e-47 |
| Msa0549540 | Msa1361200 | 0.808400 | 3.155979e-50 | -8.615850e-47 |
| Msa0556070 | Msa1361200 | 0.833308 | 5.746509e-56 | -8.615850e-47 |
| Msa0565760 | Msa1361200 | 0.809975 | 1.450510e-50 | -8.615850e-47 |
| Msa0565860 | Msa1361200 | 0.802315 | 5.946042e-49 | -8.615850e-47 |
| Msa0566010 | Msa1361200 | 0.854339 | 1.315012e-61 | -8.615850e-47 |
| Msa0568120 | Msa1361200 | 0.813616 | 2.339186e-51 | -8.615850e-47 |
| Msa0568600 | Msa1361200 | 0.940510 | 2.064470e-100 | -8.615850e-47 |
| Msa0568610 | Msa1361200 | 0.859137 | 5.090899e-63 | -8.615850e-47 |
| Msa0569930 | Msa1361200 | 0.825277 | 5.118008e-54 | -8.615850e-47 |
| Msa0577050 | Msa1361200 | 0.807609 | 4.649106e-50 | -8.615850e-47 |
| Msa0584280 | Msa1361200 | 0.823797 | 1.141207e-53 | -8.615850e-47 |
| Msa0591780 | Msa1361200 | 0.808262 | 3.377272e-50 | -8.615850e-47 |
| Msa0598250 | Msa1361200 | 0.815498 | 8.964327e-52 | -8.615850e-47 |
| Msa0599250 | Msa1361200 | 0.817025 | 4.083216e-52 | -8.615850e-47 |
| Msa0600820 | Msa1361200 | 0.843669 | 1.215678e-58 | -8.615850e-47 |
| Msa0853480 | Msa1361200 | 0.816853 | 4.463674e-52 | -8.615850e-47 |
| Msa0853500 | Msa1361200 | 0.827356 | 1.637051e-54 | -8.615850e-47 |
| Msa0868040 | Msa1361200 | 0.822317 | 2.526865e-53 | -8.615850e-47 |
| Msa0871470 | Msa1361200 | 0.805460 | 1.320957e-49 | -8.615850e-47 |
| Msa0884300 | Msa1361200 | 0.813513 | 2.463763e-51 | -8.615850e-47 |
| Msa0887000 | Msa1361200 | 0.819425 | 1.169613e-52 | -8.615850e-47 |
| Msa0904630 | Msa1361200 | 0.844301 | 8.230360e-59 | -8.615850e-47 |
| Msa0911910 | Msa1361200 | 0.840647 | 7.665188e-58 | -8.615850e-47 |
| Msa0936650 | Msa1361200 | 0.830806 | 2.387183e-55 | -8.615850e-47 |
| Msa0936690 | Msa1361200 | 0.825804 | 3.837656e-54 | -8.615850e-47 |
| Msa0944690 | Msa1361200 | 0.806175 | 9.347530e-50 | -8.615850e-47 |
| Msa0964680 | Msa1361200 | 0.805968 | 1.032998e-49 | -8.615850e-47 |
| Msa0967670 | Msa1361200 | 0.815535 | 8.794016e-52 | -8.615850e-47 |
| Msa0968780 | Msa1361200 | 0.807753 | 4.333721e-50 | -8.615850e-47 |
| Msa0970050 | Msa1361200 | 0.810455 | 1.143137e-50 | -8.615850e-47 |
| Msa0973130 | Msa1361200 | 0.807487 | 4.935506e-50 | -8.615850e-47 |
| Msa0973230 | Msa1361200 | 0.813198 | 2.889386e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1361200 | MtrunA17_Chr8g0383471 | 93.902 | 82 | 5 | 0 | 1 | 82 | 1 | 82 | 2.01e-44 | 137 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 46 sgRNAs with CRISPR-Local
Find 133 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGAACATTGATTATGATTTA+TGG | 0.145840 | tig0017374:+54153 | None:intergenic |
| AACTATAGATATTTGATATA+TGG | 0.209688 | tig0017374:+55084 | None:intergenic |
| AAACTAGGAGACTTTAATTA+TGG | 0.215662 | tig0017374:+54582 | None:intergenic |
| CTTGTGTTTGTGTCCCTTCA+TGG | 0.225941 | tig0017374:+54684 | None:intergenic |
| TTCCCTCAATGTTACGTTGT+TGG | 0.341086 | tig0017374:+55320 | None:intergenic |
| TGGCAAAACACTCAATTATC+AGG | 0.352740 | tig0017374:-56763 | Msa1361200:intron |
| GATTTATGGATGTAGATATA+TGG | 0.352860 | tig0017374:+54167 | None:intergenic |
| ACCCTTTGTGTTCTTTAACT+TGG | 0.379775 | tig0017374:-55293 | Msa1361200:five_prime_UTR |
| TACTAAAGATGGAGCTGAAA+AGG | 0.386508 | tig0017374:-54732 | Msa1361200:CDS |
| AGGGGAGCATATATAAATAT+AGG | 0.412997 | tig0017374:-54308 | Msa1361200:three_prime_UTR |
| TTGAGAGTAATATTAAGATA+TGG | 0.450623 | tig0017374:-55063 | Msa1361200:exon |
| TGCATAAGATATGGCCTAGT+TGG | 0.452766 | tig0017374:+55116 | None:intergenic |
| ATAACTCTCCTCCATGCATA+TGG | 0.467549 | tig0017374:+56798 | None:intergenic |
| AAGCTCATAGATAGAATTGC+AGG | 0.467654 | tig0017374:+54486 | None:intergenic |
| TTTGTGTCCCTCGAAATTGT+TGG | 0.468411 | tig0017374:+55346 | None:intergenic |
| AGGAGACTTTAATTATGGAT+TGG | 0.479268 | tig0017374:+54587 | None:intergenic |
| AGACTTTAATTATGGATTGG+TGG | 0.484159 | tig0017374:+54590 | None:intergenic |
| ATGGATTGGTGGATTCTTTG+AGG | 0.484420 | tig0017374:+54601 | None:intergenic |
| GCAACAAGAAGGCGTTTGCT+TGG | 0.499691 | tig0017374:+55032 | None:intergenic |
| ATTGGTGGATTCTTTGAGGC+AGG | 0.510445 | tig0017374:+54605 | None:intergenic |
| GGTAATTAAGCACTGTGGAT+TGG | 0.514972 | tig0017374:+54508 | None:intergenic |
| ACTAAAGATGGAGCTGAAAA+GGG | 0.528078 | tig0017374:-54731 | Msa1361200:CDS |
| AGCCAACAACGTAACATTGA+GGG | 0.530525 | tig0017374:-55322 | Msa1361200:five_prime_UTR |
| TGGAAGTTATGAGAGTGTGA+GGG | 0.536134 | tig0017374:-54327 | Msa1361200:three_prime_UTR |
| TTGGAAGTTATGAGAGTGTG+AGG | 0.537291 | tig0017374:-54328 | Msa1361200:three_prime_UTR |
| TCCAAGTTAAAGAACACAAA+GGG | 0.541459 | tig0017374:+55292 | None:intergenic |
| GGAAGTTATGAGAGTGTGAG+GGG | 0.541779 | tig0017374:-54326 | Msa1361200:three_prime_UTR |
| ACATATGTCTGCATAAGGTA+AGG | 0.543962 | tig0017374:+54224 | None:intergenic |
| TTGTTTAAGCTAAACCATGA+AGG | 0.545024 | tig0017374:-54698 | Msa1361200:CDS |
| GGAGTTAAGTAATTTGCAAG+AGG | 0.553059 | tig0017374:+55156 | None:intergenic |
| TGATGACTTGTTGGATACAA+TGG | 0.554869 | tig0017374:-54636 | Msa1361200:CDS |
| ACAACGTAACATTGAGGGAA+TGG | 0.556781 | tig0017374:-55317 | Msa1361200:five_prime_UTR |
| AACTTGAGAGATACTAAAGA+TGG | 0.564007 | tig0017374:-54743 | Msa1361200:CDS |
| GAGTTAAGTAATTTGCAAGA+GGG | 0.566314 | tig0017374:+55157 | None:intergenic |
| TTCATCTTAACTACAGCTCA+AGG | 0.570896 | tig0017374:-54993 | Msa1361200:intron |
| GCACAGTGCCAACAATTTCG+AGG | 0.572541 | tig0017374:-55354 | Msa1361200:five_prime_UTR |
| TGTTTAAGCTAAACCATGAA+GGG | 0.579354 | tig0017374:-54697 | Msa1361200:CDS |
| AGAGTTATTCTATCAAGTCA+TGG | 0.596916 | tig0017374:-56783 | Msa1361200:five_prime_UTR |
| CACAGTGCCAACAATTTCGA+GGG | 0.621204 | tig0017374:-55353 | Msa1361200:five_prime_UTR |
| AAGCCAACAACGTAACATTG+AGG | 0.634993 | tig0017374:-55323 | Msa1361200:five_prime_UTR |
| ATCCAAGTTAAAGAACACAA+AGG | 0.639483 | tig0017374:+55291 | None:intergenic |
| TTGGGGAAGAGCCATATGCA+TGG | 0.644947 | tig0017374:-56809 | None:intergenic |
| TGATTAAGCATCAACAACAC+TGG | 0.649291 | tig0017374:+54385 | None:intergenic |
| AGCTCATAGATAGAATTGCA+GGG | 0.664206 | tig0017374:+54487 | None:intergenic |
| TGCAGGGTAATTAAGCACTG+TGG | 0.694712 | tig0017374:+54503 | None:intergenic |
| GGGAAGAGCCATATGCATGG+AGG | 0.733072 | tig0017374:-56806 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTGCTATAATAAAAAATTAT+AGG | + | tig0017374:54400-54419 | None:intergenic | 10.0% |
| !!! | TTTTTATAGATTTTTTTTTG+AGG | - | tig0017374:54519-54538 | Msa1361200:three_prime_UTR | 10.0% |
| !!! | AATTTTTTATAATCTATAAG+AGG | + | tig0017374:54859-54878 | None:intergenic | 10.0% |
| !! | AATTAATATTTGTATATTTG+AGG | - | tig0017374:56134-56153 | Msa1361200:intron | 10.0% |
| !! | TAAAAAAATATGTATTGTGA+TGG | - | tig0017374:54274-54293 | Msa1361200:three_prime_UTR | 15.0% |
| !!! | TTTTCTTATATCAGATATAT+AGG | - | tig0017374:54350-54369 | Msa1361200:three_prime_UTR | 15.0% |
| !!! | ATTAGAATTTTGATTCATTT+CGG | - | tig0017374:54743-54762 | Msa1361200:CDS | 15.0% |
| !!! | TACAATTTTAAAAATACTGA+GGG | + | tig0017374:55052-55071 | None:intergenic | 15.0% |
| !!! | TTACAATTTTAAAAATACTG+AGG | + | tig0017374:55053-55072 | None:intergenic | 15.0% |
| !!! | AAACATTATCATTGATTTTT+CGG | + | tig0017374:55355-55374 | None:intergenic | 15.0% |
| !!! | ATTTTATTAATGCAGATATT+TGG | - | tig0017374:55562-55581 | Msa1361200:intron | 15.0% |
| !! | AACTATAGATATTTGATATA+TGG | + | tig0017374:55863-55882 | None:intergenic | 15.0% |
| !! | GCAAAATAGTTTAGTAATAT+TGG | - | tig0017374:54416-54435 | Msa1361200:three_prime_UTR | 20.0% |
| !!! | AGTTTTAAAAATCTCTTGTT+CGG | + | tig0017374:54698-54717 | None:intergenic | 20.0% |
| !! | GGATGTTATATATAGATAAT+TGG | - | tig0017374:54792-54811 | Msa1361200:intron | 20.0% |
| !!! | TTTTAACCTTTCAATTTTTG+AGG | - | tig0017374:55533-55552 | Msa1361200:intron | 20.0% |
| !!! | TTTAACCTTTCAATTTTTGA+GGG | - | tig0017374:55534-55553 | Msa1361200:intron | 20.0% |
| !!! | AAAACAATTGTTGTGATTTT+AGG | + | tig0017374:55744-55763 | None:intergenic | 20.0% |
| !! | TTGAGAGTAATATTAAGATA+TGG | - | tig0017374:55881-55900 | Msa1361200:intron | 20.0% |
| !! | GAAAACATCACATAAATTAT+AGG | + | tig0017374:56160-56179 | None:intergenic | 20.0% |
| !!! | ATTTATGTGATGTTTTCTTT+TGG | - | tig0017374:56163-56182 | Msa1361200:intron | 20.0% |
| !! | GAAAGAGAAAAAATAAAACT+AGG | + | tig0017374:56380-56399 | None:intergenic | 20.0% |
| !!! | ATTTTTGGTAGGAAAAAAAA+AGG | - | tig0017374:56411-56430 | Msa1361200:intron | 20.0% |
| !!! | ATATTTTGAACTTTGAAGAT+AGG | - | tig0017374:56493-56512 | Msa1361200:intron | 20.0% |
| !!! | TATTTTGAACTTTGAAGATA+GGG | - | tig0017374:56494-56513 | Msa1361200:intron | 20.0% |
| !!! | CACTTTTAAATGTATAGTTT+TGG | - | tig0017374:56597-56616 | Msa1361200:intron | 20.0% |
| ! | GTATATCTCTTCTTTATTCA+TGG | + | tig0017374:54327-54346 | None:intergenic | 25.0% |
| ! | TATAGGAAACTTTCAAAACT+TGG | + | tig0017374:54383-54402 | None:intergenic | 25.0% |
| ! | TGAAAATCCTAGTTTAAACT+CGG | + | tig0017374:54640-54659 | None:intergenic | 25.0% |
| !!! | GTTTTAAAAATCTCTTGTTC+GGG | + | tig0017374:54697-54716 | None:intergenic | 25.0% |
| !!! | GAAATTTAGATTTTGACACA+AGG | - | tig0017374:55163-55182 | Msa1361200:five_prime_UTR | 25.0% |
| ! | TATCATAGTATATGTATCGA+TGG | + | tig0017374:55321-55340 | None:intergenic | 25.0% |
| ! | TTTGTCAGAATATATATGCA+AGG | - | tig0017374:55372-55391 | Msa1361200:intron | 25.0% |
| !! | AAACAAATAAACACGTTTTG+AGG | + | tig0017374:55498-55517 | None:intergenic | 25.0% |
| !!! | TTAACCTTTCAATTTTTGAG+GGG | - | tig0017374:55535-55554 | Msa1361200:intron | 25.0% |
| !!! | TTTTGAAGTTGCATAAGATA+TGG | + | tig0017374:55840-55859 | None:intergenic | 25.0% |
| !! | TGCATCGTTCATTAATTTTA+AGG | - | tig0017374:56014-56033 | Msa1361200:intron | 25.0% |
| !! | AGAAAAAAATGATGACTTGT+TGG | - | tig0017374:56299-56318 | Msa1361200:intron | 25.0% |
| ! | AAACTAGGAGACTTTAATTA+TGG | + | tig0017374:56365-56384 | None:intergenic | 25.0% |
| !! | TTTCCTTAGAGAACAATTTT+TGG | - | tig0017374:56396-56415 | Msa1361200:intron | 25.0% |
| ! | AAAAATCTGTGATTTAAGTG+TGG | + | tig0017374:56524-56543 | None:intergenic | 25.0% |
| !! | ACTTAAATCACAGATTTTTG+TGG | - | tig0017374:56525-56544 | Msa1361200:intron | 25.0% |
| !! | ATATACTAAGCATCTGTTTT+TGG | + | tig0017374:56697-56716 | None:intergenic | 25.0% |
| ! | GATTTATGGATGTAGATATA+TGG | + | tig0017374:56780-56799 | None:intergenic | 25.0% |
| !! | GGAACATTGATTATGATTTA+TGG | + | tig0017374:56794-56813 | None:intergenic | 25.0% |
| AGAGTTATTCTATCAAGTCA+TGG | - | tig0017374:54161-54180 | Msa1361200:three_prime_UTR | 30.0% | |
| AGTAGATATTTGTACTGTGA+TGG | - | tig0017374:54241-54260 | Msa1361200:three_prime_UTR | 30.0% | |
| TGATATACGTAGCATATGAT+AGG | - | tig0017374:54448-54467 | Msa1361200:three_prime_UTR | 30.0% | |
| !! | TTCGATTAGTTTGAGATAAG+GGG | + | tig0017374:54672-54691 | None:intergenic | 30.0% |
| !! | CTTCGATTAGTTTGAGATAA+GGG | + | tig0017374:54673-54692 | None:intergenic | 30.0% |
| !! | ACTTCGATTAGTTTGAGATA+AGG | + | tig0017374:54674-54693 | None:intergenic | 30.0% |
| CCTTATAATGTGAGGTTATT+TGG | + | tig0017374:55006-55025 | None:intergenic | 30.0% | |
| CCAAATAACCTCACATTATA+AGG | - | tig0017374:55003-55022 | Msa1361200:CDS | 30.0% | |
| CATTTAACTAGCACAAGATT+TGG | - | tig0017374:55242-55261 | Msa1361200:five_prime_UTR | 30.0% | |
| !!! | AAATAAACACGTTTTGAGGA+GGG | + | tig0017374:55494-55513 | None:intergenic | 30.0% |
| !! | TAACCTTTCAATTTTTGAGG+GGG | - | tig0017374:55536-55555 | Msa1361200:intron | 30.0% |
| TCCAAGTTAAAGAACACAAA+GGG | + | tig0017374:55655-55674 | None:intergenic | 30.0% | |
| ATCCAAGTTAAAGAACACAA+AGG | + | tig0017374:55656-55675 | None:intergenic | 30.0% | |
| ! | GAGTTAAGTAATTTGCAAGA+GGG | + | tig0017374:55790-55809 | None:intergenic | 30.0% |
| !! | CTAGTTGGTGTCTTTTTATA+GGG | + | tig0017374:55816-55835 | None:intergenic | 30.0% |
| TCAACAAAAATGCAACAAGA+AGG | + | tig0017374:55926-55945 | None:intergenic | 30.0% | |
| AACTTGAGAGATACTAAAGA+TGG | - | tig0017374:56201-56220 | Msa1361200:intron | 30.0% | |
| TTGTTTAAGCTAAACCATGA+AGG | - | tig0017374:56246-56265 | Msa1361200:intron | 30.0% | |
| TGTTTAAGCTAAACCATGAA+GGG | - | tig0017374:56247-56266 | Msa1361200:intron | 30.0% | |
| !! | AGACTTTAATTATGGATTGG+TGG | + | tig0017374:56357-56376 | None:intergenic | 30.0% |
| AGGAGACTTTAATTATGGAT+TGG | + | tig0017374:56360-56379 | None:intergenic | 30.0% | |
| CTACCAAAAATTGTTCTCTA+AGG | + | tig0017374:56402-56421 | None:intergenic | 30.0% | |
| !!! | CTTAGAGAACAATTTTTGGT+AGG | - | tig0017374:56400-56419 | Msa1361200:intron | 30.0% |
| ! | TAAATCACAGATTTTTGTGG+AGG | - | tig0017374:56528-56547 | Msa1361200:intron | 30.0% |
| ! | AGGGGAGCATATATAAATAT+AGG | - | tig0017374:56636-56655 | Msa1361200:intron | 30.0% |
| CAAAAACATATGTCTGCATA+AGG | + | tig0017374:56728-56747 | None:intergenic | 30.0% | |
| TGGCAAAACACTCAATTATC+AGG | - | tig0017374:54181-54200 | Msa1361200:three_prime_UTR | 35.0% | |
| CATTGATCCGAGTTTAAACT+AGG | - | tig0017374:54630-54649 | Msa1361200:CDS | 35.0% | |
| CAAAAGCTCCTTATAATGTG+AGG | + | tig0017374:55014-55033 | None:intergenic | 35.0% | |
| ACAAGATTTGGATTTGTGCA+TGG | - | tig0017374:55254-55273 | Msa1361200:five_prime_UTR | 35.0% | |
| GAATCACATATCACCCTTAT+AGG | - | tig0017374:55441-55460 | Msa1361200:intron | 35.0% | |
| !!! | AATAAACACGTTTTGAGGAG+GGG | + | tig0017374:55493-55512 | None:intergenic | 35.0% |
| !!! | CAAATAAACACGTTTTGAGG+AGG | + | tig0017374:55495-55514 | None:intergenic | 35.0% |
| ACCCTTTGTGTTCTTTAACT+TGG | - | tig0017374:55651-55670 | Msa1361200:intron | 35.0% | |
| !! | ACACTTTTTGCTTCGATTAC+AGG | + | tig0017374:55679-55698 | None:intergenic | 35.0% |
| ! | GGAGTTAAGTAATTTGCAAG+AGG | + | tig0017374:55791-55810 | None:intergenic | 35.0% |
| !! | TTGGTGTCTTTTTATAGGGA+GGG | + | tig0017374:55812-55831 | None:intergenic | 35.0% |
| !! | CCTAGTTGGTGTCTTTTTAT+AGG | + | tig0017374:55817-55836 | None:intergenic | 35.0% |
| CCTATAAAAAGACACCAACT+AGG | - | tig0017374:55814-55833 | Msa1361200:intron | 35.0% | |
| TTCATCTTAACTACAGCTCA+AGG | - | tig0017374:55951-55970 | Msa1361200:intron | 35.0% | |
| TACTAAAGATGGAGCTGAAA+AGG | - | tig0017374:56212-56231 | Msa1361200:intron | 35.0% | |
| ACTAAAGATGGAGCTGAAAA+GGG | - | tig0017374:56213-56232 | Msa1361200:intron | 35.0% | |
| !! | TGATGACTTGTTGGATACAA+TGG | - | tig0017374:56308-56327 | Msa1361200:intron | 35.0% |
| AGCTCATAGATAGAATTGCA+GGG | + | tig0017374:56460-56479 | None:intergenic | 35.0% | |
| AAGCTCATAGATAGAATTGC+AGG | + | tig0017374:56461-56480 | None:intergenic | 35.0% | |
| TGATTAAGCATCAACAACAC+TGG | + | tig0017374:56562-56581 | None:intergenic | 35.0% | |
| ACATATGTCTGCATAAGGTA+AGG | + | tig0017374:56723-56742 | None:intergenic | 35.0% | |
| ATAACTCTCCTCCATGCATA+TGG | + | tig0017374:54149-54168 | None:intergenic | 40.0% | |
| GTCTATGTGCACGATTATCA+CGG | - | tig0017374:55288-55307 | Msa1361200:five_prime_UTR | 40.0% | |
| TGACCTGTGAGATTGGAAAA+GGG | - | tig0017374:55419-55438 | Msa1361200:intron | 40.0% | |
| ! | ATTCCCTTTTCCAATCTCAC+AGG | + | tig0017374:55425-55444 | None:intergenic | 40.0% |
| TGCATACAGGAGACCTATAA+GGG | + | tig0017374:55457-55476 | None:intergenic | 40.0% | |
| TTGCATACAGGAGACCTATA+AGG | + | tig0017374:55458-55477 | None:intergenic | 40.0% | |
| TTATAGGTCTCCTGTATGCA+AGG | - | tig0017374:55457-55476 | Msa1361200:intron | 40.0% | |
| !!! | ATAAACACGTTTTGAGGAGG+GGG | + | tig0017374:55492-55511 | None:intergenic | 40.0% |
| ACACCCCCTCAAAAATTGAA+AGG | + | tig0017374:55542-55561 | None:intergenic | 40.0% | |
| TTTGTGTCCCTCGAAATTGT+TGG | + | tig0017374:55601-55620 | None:intergenic | 40.0% | |
| AAGCCAACAACGTAACATTG+AGG | - | tig0017374:55621-55640 | Msa1361200:intron | 40.0% | |
| AGCCAACAACGTAACATTGA+GGG | - | tig0017374:55622-55641 | Msa1361200:intron | 40.0% | |
| TTCCCTCAATGTTACGTTGT+TGG | + | tig0017374:55627-55646 | None:intergenic | 40.0% | |
| ACAACGTAACATTGAGGGAA+TGG | - | tig0017374:55627-55646 | Msa1361200:intron | 40.0% | |
| !!! | AAGTGTTGTCATTTTCAGCG+AGG | - | tig0017374:55693-55712 | Msa1361200:intron | 40.0% |
| !! | GTTGGTGTCTTTTTATAGGG+AGG | + | tig0017374:55813-55832 | None:intergenic | 40.0% |
| TGCATAAGATATGGCCTAGT+TGG | + | tig0017374:55831-55850 | None:intergenic | 40.0% | |
| ATTAATGAACGATGCAGCAG+TGG | + | tig0017374:56010-56029 | None:intergenic | 40.0% | |
| !! | ATGGATTGGTGGATTCTTTG+AGG | + | tig0017374:56346-56365 | None:intergenic | 40.0% |
| ! | GGTAATTAAGCACTGTGGAT+TGG | + | tig0017374:56439-56458 | None:intergenic | 40.0% |
| ! | TTGGAAGTTATGAGAGTGTG+AGG | - | tig0017374:56616-56635 | Msa1361200:intron | 40.0% |
| ! | TGGAAGTTATGAGAGTGTGA+GGG | - | tig0017374:56617-56636 | Msa1361200:intron | 40.0% |
| TATGTGCACGATTATCACGG+TGG | - | tig0017374:55291-55310 | Msa1361200:five_prime_UTR | 45.0% | |
| ATCTCACAGGTCACAACACA+TGG | + | tig0017374:55412-55431 | None:intergenic | 45.0% | |
| TGTGTTGTGACCTGTGAGAT+TGG | - | tig0017374:55412-55431 | Msa1361200:intron | 45.0% | |
| GTGACCTGTGAGATTGGAAA+AGG | - | tig0017374:55418-55437 | Msa1361200:intron | 45.0% | |
| !!! | TAAACACGTTTTGAGGAGGG+GGG | + | tig0017374:55491-55510 | None:intergenic | 45.0% |
| CACAGTGCCAACAATTTCGA+GGG | - | tig0017374:55591-55610 | Msa1361200:intron | 45.0% | |
| CTTGTGTTTGTGTCCCTTCA+TGG | + | tig0017374:56263-56282 | None:intergenic | 45.0% | |
| !! | ATTGGTGGATTCTTTGAGGC+AGG | + | tig0017374:56342-56361 | None:intergenic | 45.0% |
| ! | TGCAGGGTAATTAAGCACTG+TGG | + | tig0017374:56444-56463 | None:intergenic | 45.0% |
| ! | GGAAGTTATGAGAGTGTGAG+GGG | - | tig0017374:56618-56637 | Msa1361200:intron | 45.0% |
| !! | CTATTATTTAAAAAAATATA+TGG | + | tig0017374:54579-54598 | None:intergenic | 5.0% |
| !!! | AAAAATTAAGATTTTTATTT+TGG | - | tig0017374:54771-54790 | Msa1361200:intron | 5.0% |
| GGTCTCCTGTATGCAAGGAA+TGG | - | tig0017374:55462-55481 | Msa1361200:intron | 50.0% | |
| !!! | AAACACGTTTTGAGGAGGGG+GGG | + | tig0017374:55490-55509 | None:intergenic | 50.0% |
| GCACAGTGCCAACAATTTCG+AGG | - | tig0017374:55590-55609 | Msa1361200:intron | 50.0% | |
| ! | ATTTTCAGCGAGGACAGAGC+AGG | - | tig0017374:55703-55722 | Msa1361200:intron | 50.0% |
| !! | GCAACAAGAAGGCGTTTGCT+TGG | + | tig0017374:55915-55934 | None:intergenic | 50.0% |
| ATGAACGATGCAGCAGTGGT+AGG | + | tig0017374:56006-56025 | None:intergenic | 50.0% | |
| GGGCTCCATTCCTTGCATAC+AGG | + | tig0017374:55470-55489 | None:intergenic | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0017374 | gene | 54145 | 56821 | 54145 | ID=Msa1361200;Name=Msa1361200 |
| tig0017374 | mRNA | 54145 | 56821 | 54145 | ID=Msa1361200-mRNA-1;Parent=Msa1361200;Name=Msa1361200-mRNA-1;_AED=0.02;_eAED=0.02;_QI=381|1|1|1|0.5|0.33|3|450|82 |
| tig0017374 | exon | 54145 | 54770 | 54145 | ID=Msa1361200-mRNA-1:exon:12298;Parent=Msa1361200-mRNA-1 |
| tig0017374 | exon | 54994 | 55389 | 54994 | ID=Msa1361200-mRNA-1:exon:12297;Parent=Msa1361200-mRNA-1 |
| tig0017374 | exon | 56764 | 56821 | 56764 | ID=Msa1361200-mRNA-1:exon:12296;Parent=Msa1361200-mRNA-1 |
| tig0017374 | five_prime_UTR | 56764 | 56821 | 56764 | ID=Msa1361200-mRNA-1:five_prime_utr;Parent=Msa1361200-mRNA-1 |
| tig0017374 | five_prime_UTR | 55067 | 55389 | 55067 | ID=Msa1361200-mRNA-1:five_prime_utr;Parent=Msa1361200-mRNA-1 |
| tig0017374 | CDS | 54994 | 55066 | 54994 | ID=Msa1361200-mRNA-1:cds;Parent=Msa1361200-mRNA-1 |
| tig0017374 | CDS | 54595 | 54770 | 54595 | ID=Msa1361200-mRNA-1:cds;Parent=Msa1361200-mRNA-1 |
| tig0017374 | three_prime_UTR | 54145 | 54594 | 54145 | ID=Msa1361200-mRNA-1:three_prime_utr;Parent=Msa1361200-mRNA-1 |
| Gene Sequence |
| Protein sequence |
