AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1333440


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1333440 MtrunA17_Chr4g0071811 97.375 381 6 2 1 380 1 378 0.0 748
Msa1333440 MtrunA17_Chr2g0298711 39.590 293 135 10 36 310 43 311 4.88e-41 147
Msa1333440 MtrunA17_Chr5g0431351 47.009 117 57 3 264 380 99 210 2.52e-21 91.3
Msa1333440 MtrunA17_Chr7g0226451 35.220 159 65 5 257 380 190 345 2.24e-17 82.4
Msa1333440 MtrunA17_Chr1g0209861 44.444 108 48 4 285 380 311 418 7.37e-17 81.6
Msa1333440 MtrunA17_Chr8g0390971 42.453 106 49 1 287 380 289 394 3.01e-15 76.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1333440 AT5G57180.1 46.275 443 153 19 1 381 1 420 3.19e-76 242
Msa1333440 AT5G57180.2 46.154 442 153 19 1 380 1 419 3.23e-75 240
Msa1333440 AT4G25990.3 42.130 432 145 18 1 381 1 378 9.39e-69 221
Msa1333440 AT4G25990.2 42.130 432 145 18 1 381 1 378 3.52e-68 221
Msa1333440 AT4G25990.1 41.995 431 145 18 1 380 1 377 1.01e-67 219
Msa1333440 AT5G57180.3 41.221 393 150 18 1 331 1 374 1.82e-44 158
Msa1333440 AT5G57180.4 41.221 393 150 18 1 331 1 374 1.82e-44 158
Msa1333440 AT5G14370.1 45.794 107 37 4 290 380 229 330 1.98e-17 83.2
Msa1333440 AT1G25440.1 36.879 141 72 2 254 380 260 397 3.01e-17 83.2
Msa1333440 AT1G07050.2 50.000 92 39 2 290 381 104 188 2.52e-16 77.4
Msa1333440 AT1G73870.1 45.370 108 45 3 287 380 274 381 6.59e-16 79.0
Msa1333440 AT1G07050.1 49.451 91 39 2 290 380 104 187 1.30e-15 75.1
Msa1333440 AT1G68520.1 36.923 130 57 3 269 380 271 393 1.11e-14 75.5
Msa1333440 AT1G49130.2 35.556 135 64 4 253 380 189 307 1.43e-11 65.5
Msa1333440 AT1G49130.1 35.556 135 64 4 253 380 196 314 1.52e-11 65.5

Find 159 sgRNAs with CRISPR-Local

Find 242 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ACCACCGACACTGCATATTT+TGG 0.094471 8_4:-53581964 None:intergenic
TCCCGAATTTATATGAATTA+AGG 0.133453 8_4:-53580954 None:intergenic
TATGATATGGTTATGATAAT+TGG 0.154427 8_4:+53583198 Msa1333440:three_prime_UTR
TGACATGGTTTCACCGGTTT+TGG 0.239666 8_4:-53581639 None:intergenic
TCCCTTAATTCATATAAATT+CGG 0.248224 8_4:+53580952 Msa1333440:five_prime_UTR
ATTGATCATACCTTCATTCT+TGG 0.253571 8_4:-53583128 None:intergenic
GATTTATTATTGTTATTGTT+GGG 0.253877 8_4:-53581501 None:intergenic
AGCTTCGTTGTAGGTTTGAT+TGG 0.274583 8_4:-53581418 None:intergenic
TCTCATCCATGGATTGGTTT+TGG 0.279149 8_4:+53581828 Msa1333440:CDS
CCCGAATTTATATGAATTAA+GGG 0.284870 8_4:-53580953 None:intergenic
TGTCACAAATAGATTTGTTA+TGG 0.306145 8_4:+53582982 Msa1333440:CDS
GGAGAGAGAGGGAGAGAGAT+GGG 0.309369 8_4:-53580771 None:intergenic
CAATAATAAATCCACCAAAT+TGG 0.309576 8_4:+53581512 Msa1333440:CDS
ACATACATTAACATCGTTTC+CGG 0.311561 8_4:-53582186 None:intergenic
TTGGCAAGTGAAATTCAAAA+AGG 0.312711 8_4:-53581203 None:intergenic
AATTGCATATGAGTGGAAAT+TGG 0.318024 8_4:-53581172 None:intergenic
AGGAAATCTAGTTTATGATA+TGG 0.321517 8_4:+53583185 Msa1333440:three_prime_UTR
TTGGGATTGGAGAAGAGGTT+TGG 0.329352 8_4:-53581465 None:intergenic
AACAAGCCTAACGCTTGTTT+TGG 0.329462 8_4:+53583403 Msa1333440:three_prime_UTR
GAGAGTAAAGAAAAGGAAAT+TGG 0.338392 8_4:-53580898 None:intergenic
GCTAAACCCTAAACCCAAAA+AGG 0.340692 8_4:-53581118 None:intergenic
TGCAGTCTGCACCAATGTTT+AGG 0.343838 8_4:+53583345 Msa1333440:three_prime_UTR
CACGGGAGAAGGAAGTTAAA+AGG 0.344302 8_4:-53580744 None:intergenic
GGATTTATTATTGTTATTGT+TGG 0.348745 8_4:-53581502 None:intergenic
GCCATGTTGATGAAGGAAAT+TGG 0.353307 8_4:+53581904 Msa1333440:CDS
TTTCATACTCTTCAATTCAT+TGG 0.353990 8_4:+53580825 Msa1333440:five_prime_UTR
CCCTTAATTCATATAAATTC+GGG 0.360660 8_4:+53580953 Msa1333440:five_prime_UTR
AATTGAATTACGACGGTGTT+CGG 0.364551 8_4:+53582105 Msa1333440:CDS
ACAAAGAACCTGAAATTGAT+TGG 0.366595 8_4:-53581009 None:intergenic
GGGCTTGCCGTAAAGTAAAA+AGG 0.371473 8_4:-53581601 None:intergenic
GAGAGTGTGTAGATAGATAT+AGG 0.373025 8_4:-53580707 None:intergenic
GGGAAATTCGACTTCCGGTT+AGG 0.378755 8_4:+53581852 Msa1333440:CDS
AGGAAATTGGTGGAATTTCC+CGG 0.382166 8_4:+53581917 Msa1333440:CDS
AATCATCACCACCATGTTCA+TGG 0.382343 8_4:+53581289 Msa1333440:CDS
AGAAAATCAGATATCAAGTT+AGG 0.387014 8_4:+53583084 Msa1333440:CDS
TGGGATTGGAGAAGAGGTTT+GGG 0.389394 8_4:-53581464 None:intergenic
GTCACAAATAGATTTGTTAT+GGG 0.395534 8_4:+53582983 Msa1333440:CDS
AGGAGAGAGAGGGAGAGAGA+TGG 0.403103 8_4:-53580772 None:intergenic
TATTCTAAACTAAACCCCTT+TGG 0.406174 8_4:+53581042 Msa1333440:five_prime_UTR
TTTCTTTCTTGCTCCGTATG+TGG 0.408507 8_4:-53580536 None:intergenic
GAGTGTTGCAGCTTCGTTGT+AGG 0.410073 8_4:-53581427 None:intergenic
TCTTCTTCTCATCCATGGAT+TGG 0.411520 8_4:+53581822 Msa1333440:CDS
TTAAGGGAAAAGCGAGGGGC+AGG 0.413489 8_4:-53580937 None:intergenic
CCCCTTTGTGGTTGTTGCGT+TGG 0.419219 8_4:+53583260 Msa1333440:three_prime_UTR
AGAGAGAGGGAGAGAGATGG+GGG 0.419235 8_4:-53580769 None:intergenic
TTTGGCTCCGACTGGAAATC+GGG 0.427983 8_4:-53581621 None:intergenic
TGAGATTGGGATTGGAGAAG+AGG 0.428990 8_4:-53581470 None:intergenic
GGTTTGGGTATGCAGTGTTA+AGG 0.430567 8_4:-53581449 None:intergenic
TAGTATATTATTCTAATGTA+AGG 0.433745 8_4:+53583551 Msa1333440:three_prime_UTR
TTCTTTCTTGCTCCGTATGT+GGG 0.436411 8_4:-53580535 None:intergenic
GAATGCAGAATTGAAAGAAA+TGG 0.436941 8_4:+53582049 Msa1333440:CDS
TTGGCGGGAAATTCGACTTC+CGG 0.439230 8_4:+53581847 Msa1333440:CDS
GCTTCGTTGTAGGTTTGATT+GGG 0.439703 8_4:-53581417 None:intergenic
TTTCCGGAAGCATCGGAGAC+AGG 0.440046 8_4:-53582170 None:intergenic
TTGTTATGGGAGAATGGAGG+AGG 0.440896 8_4:+53582996 Msa1333440:CDS
ATTGCATATGAGTGGAAATT+GGG 0.443723 8_4:-53581171 None:intergenic
CACCTCTCTGTAATCCTAAC+CGG 0.443822 8_4:-53581866 None:intergenic
TGGAAATTGGGCGAAATTGA+GGG 0.446512 8_4:-53581159 None:intergenic
ATAGATTTGTTATGGGAGAA+TGG 0.448843 8_4:+53582990 Msa1333440:CDS
ACTTTCCTTTCTCCTCTCCT+CGG 0.448991 8_4:+53580869 Msa1333440:five_prime_UTR
CACCATTGAACTAATCTCTC+CGG 0.459584 8_4:-53581667 None:intergenic
TGGGAGAATGGAGGAGGAAG+TGG 0.459617 8_4:+53583002 Msa1333440:CDS
GATGGAGACAGAGGAGAGAG+AGG 0.465965 8_4:-53580783 None:intergenic
AGCCCTGTCTCCGATGCTTC+CGG 0.466072 8_4:+53582167 Msa1333440:CDS
ACGTCTCTTCTTCTCATCCA+TGG 0.467379 8_4:+53581817 Msa1333440:CDS
TTCTCATCTGTATCTTACTA+AGG 0.468085 8_4:+53580581 Msa1333440:five_prime_UTR
ACGACGGTGTTCGGAAAGCT+TGG 0.468820 8_4:+53582114 Msa1333440:CDS
ACCAACGCAACAACCACAAA+GGG 0.472287 8_4:-53583261 None:intergenic
ATAATATACTAATCGAGTTA+TGG 0.475442 8_4:-53583539 None:intergenic
ATTTATTATTGTTATTGTTG+GGG 0.476105 8_4:-53581500 None:intergenic
GAGAGAGAGGGAGAGAGATG+GGG 0.477046 8_4:-53580770 None:intergenic
ATGGATAGATCCTCAAAAGT+TGG 0.481071 8_4:-53583294 None:intergenic
AGTGGCAGAGAGTAAAGAAA+AGG 0.481353 8_4:-53580905 None:intergenic
TTTCCAGTCGGAGCCAAAAC+CGG 0.481789 8_4:+53581626 Msa1333440:CDS
CTTTCCTTTCTCCTCTCCTC+GGG 0.482959 8_4:+53580870 Msa1333440:five_prime_UTR
TATAAGAGTTATAAGTGAGA+TGG 0.483571 8_4:-53580801 None:intergenic
ACTAGAAGAAATTAGAAAAG+AGG 0.485084 8_4:+53583165 Msa1333440:three_prime_UTR
GTGGAAATTGGGCGAAATTG+AGG 0.489763 8_4:-53581160 None:intergenic
CAAATGAAGATAAAGCCAAA+GGG 0.494467 8_4:-53581057 None:intergenic
CGGTGGTAAGACGGCGGCGC+CGG 0.496178 8_4:+53581980 Msa1333440:CDS
TATAAGTGAGATGGAGACAG+AGG 0.496455 8_4:-53580792 None:intergenic
GGACTCTGACATGGTTTCAC+CGG 0.498907 8_4:-53581645 None:intergenic
AAGGAAAGTACAGTGAAGAA+AGG 0.501568 8_4:-53580855 None:intergenic
AACATCGTTTCCGGAAGCAT+CGG 0.505047 8_4:-53582177 None:intergenic
ATGCAGTGTCGGTGGTAAGA+CGG 0.515154 8_4:+53581971 Msa1333440:CDS
GAAAGTACAGTGAAGAAAGG+AGG 0.516615 8_4:-53580852 None:intergenic
ATCTGTATCTTACTAAGGTA+AGG 0.519182 8_4:+53580586 Msa1333440:five_prime_UTR
GATTCAGAGATTGTTGAAGA+AGG 0.524561 8_4:-53581339 None:intergenic
TCCCGGAGAGATTAGTTCAA+TGG 0.528675 8_4:+53581665 Msa1333440:CDS
ACCAATTTCCTTCATCAACA+TGG 0.530695 8_4:-53581905 None:intergenic
AAAGTACAGTGAAGAAAGGA+GGG 0.536683 8_4:-53580851 None:intergenic
AAAGAAGAAGGTTGTTGCGG+TGG 0.538258 8_4:+53582019 Msa1333440:CDS
GCTCTTCGCCATGTTGATGA+AGG 0.541149 8_4:+53581897 Msa1333440:CDS
ATCGGAGACAGGGCTGTCAT+CGG 0.545065 8_4:-53582159 None:intergenic
ACCATTGAACTAATCTCTCC+GGG 0.545916 8_4:-53581666 None:intergenic
ATGAATTAAGGGAAAAGCGA+GGG 0.546681 8_4:-53580942 None:intergenic
AATGGTAGTGGTCCCACATA+CGG 0.548106 8_4:+53580523 None:intergenic
AGAAGGAATTGATAGCATCA+TGG 0.548899 8_4:+53581767 Msa1333440:CDS
GAAGGAATTGATAGCATCAT+GGG 0.550516 8_4:+53581768 Msa1333440:CDS
ATTAAGAAATTGCATATGAG+TGG 0.556131 8_4:-53581179 None:intergenic
TTCCCGCCAAAACCAATCCA+TGG 0.558777 8_4:-53581834 None:intergenic
GTTGCCCGAGGAGAGGAGAA+AGG 0.559676 8_4:-53580874 None:intergenic
CTCGACGAGGAAATTGAAGA+AGG 0.561335 8_4:+53581750 Msa1333440:CDS
ACGGGAGAAGGAAGTTAAAA+GGG 0.566048 8_4:-53580743 None:intergenic
GACGTGTCCAATACTCTGAA+AGG 0.567728 8_4:-53581573 None:intergenic
ATATAGCCAAAACAAGCGTT+AGG 0.568478 8_4:-53583409 None:intergenic
CGGTTAGGATTACAGAGAGG+TGG 0.569382 8_4:+53581867 Msa1333440:CDS
TTCTTTGTAACGCAGCACGC+TGG 0.571082 8_4:-53583036 None:intergenic
TTCCGGAAGCATCGGAGACA+GGG 0.571094 8_4:-53582169 None:intergenic
AGATCGACGGCCAAGAATGA+AGG 0.572545 8_4:+53583118 Msa1333440:CDS
ATGGAGACAGAGGAGAGAGA+GGG 0.574536 8_4:-53580782 None:intergenic
GTGAAACCATGTCAGAGTCC+CGG 0.575623 8_4:+53581648 Msa1333440:CDS
AATCAGATATCAAGTTAGGA+AGG 0.579412 8_4:+53583088 Msa1333440:CDS
TAAGACGGCGGCGCCGGTGA+CGG 0.581889 8_4:+53581986 Msa1333440:CDS
GGAACAGGAGGAAGAACCAT+CGG 0.583201 8_4:+53581246 Msa1333440:CDS
GAACAGGAGGAAGAACCATC+GGG 0.586253 8_4:+53581247 Msa1333440:CDS
TAAGGGAAAAGCGAGGGGCA+GGG 0.591220 8_4:-53580936 None:intergenic
ATCTCTCCGGGACTCTGACA+TGG 0.592091 8_4:-53581654 None:intergenic
GACCAACGCAACAACCACAA+AGG 0.593303 8_4:-53583262 None:intergenic
AATTGGTGTTGCCCGAGGAG+AGG 0.595304 8_4:-53580881 None:intergenic
AGGAGGAAGAACCATCGGGT+TGG 0.598540 8_4:+53581251 Msa1333440:CDS
ACAGGGCTGTCATCGGCGAA+CGG 0.603353 8_4:-53582152 None:intergenic
AGAAGGAAGTTAAAAGGGAA+AGG 0.605194 8_4:-53580738 None:intergenic
CATAAAGAAAACCTAAACAT+TGG 0.606506 8_4:-53583356 None:intergenic
ACAAATGAAGATAAAGCCAA+AGG 0.607641 8_4:-53581058 None:intergenic
ATACTGGAGGTGAATGGTAG+TGG 0.613821 8_4:+53580511 None:intergenic
CCCAAAATATGCAGTGTCGG+TGG 0.613838 8_4:+53581963 Msa1333440:CDS
CTATCTACACACTCTCTCAA+CGG 0.619721 8_4:+53580714 Msa1333440:five_prime_UTR
CATCATGGGAGGTAGAATTG+AGG 0.620329 8_4:+53581782 Msa1333440:CDS
TCGCCCAAAATATGCAGTGT+CGG 0.623873 8_4:+53581960 Msa1333440:CDS
GATTTGTTATGGGAGAATGG+AGG 0.628311 8_4:+53582993 Msa1333440:CDS
AACATACACTTGCAGAGTGG+AGG 0.630945 8_4:-53580614 None:intergenic
GGAAGGTCAATGCAGATCGA+CGG 0.632746 8_4:+53583105 Msa1333440:CDS
AGGGGCAGGGCATTGCAAAG+TGG 0.634161 8_4:-53580923 None:intergenic
CGGCAAGCCCGATTTCCAGT+CGG 0.636352 8_4:+53581614 Msa1333440:CDS
TATGAATTAAGGGAAAAGCG+AGG 0.642327 8_4:-53580943 None:intergenic
GAGAGAGGGAGAGAGATGGG+GGG 0.644914 8_4:-53580768 None:intergenic
CGCGGAATCAATACTCGACG+AGG 0.646026 8_4:+53581737 Msa1333440:CDS
TATATCTAAATCCAACCCGA+TGG 0.646645 8_4:-53581262 None:intergenic
AATTGGGCGAAATTGAGGGT+AGG 0.657668 8_4:-53581155 None:intergenic
CGGAAAGCTTGGTCTGACCG+AGG 0.657705 8_4:+53582125 Msa1333440:CDS
TAGTAAGATACAGATGAGAA+CGG 0.658473 8_4:-53580578 None:intergenic
AAGGAAATTGGTGTTGCCCG+AGG 0.659053 8_4:-53580886 None:intergenic
TTTGTGGTGTAGATTGCAAG+CGG 0.661097 8_4:-53581372 None:intergenic
AAATGAAGATAAAGCCAAAG+GGG 0.671572 8_4:-53581056 None:intergenic
GATGTTCGACTCCATGAACA+TGG 0.682341 8_4:-53581300 None:intergenic
TTGTTGAAATTGAATTACGA+CGG 0.684346 8_4:+53582098 Msa1333440:CDS
CAACGCAACAACCACAAAGG+GGG 0.685338 8_4:-53583259 None:intergenic
AGTAACATACACTTGCAGAG+TGG 0.686837 8_4:-53580617 None:intergenic
CAGTGTCGGTGGTAAGACGG+CGG 0.687348 8_4:+53581974 Msa1333440:CDS
TGAATTAAGGGAAAAGCGAG+GGG 0.690437 8_4:-53580941 None:intergenic
TAAGATACAGATGAGAACGG+AGG 0.697148 8_4:-53580575 None:intergenic
GGAATTGATAGCATCATGGG+AGG 0.697923 8_4:+53581771 Msa1333440:CDS
ATGTTGATGAAGGAAATTGG+TGG 0.707203 8_4:+53581907 Msa1333440:CDS
GTACAGTGAAGAAAGGAGGG+TGG 0.717854 8_4:-53580848 None:intergenic
CCAACGCAACAACCACAAAG+GGG 0.718227 8_4:-53583260 None:intergenic
TTCCGGTTAGGATTACAGAG+AGG 0.750478 8_4:+53581864 Msa1333440:CDS
AAATTGGTGGAATTTCCCGG+CGG 0.816024 8_4:+53581920 Msa1333440:CDS
GTTCGACTCCATGAACATGG+TGG 0.820791 8_4:-53581297 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATTTATTATTGTTATTGTTG+GGG - chr8_4:53581503-53581522 None:intergenic 15.0%
!!! GATTTATTATTGTTATTGTT+GGG - chr8_4:53581504-53581523 None:intergenic 15.0%
!! AAGTAAAGTAAAAAATGAAT+GGG - chr8_4:53582497-53582516 None:intergenic 15.0%
!! AAAGTAAAGTAAAAAATGAA+TGG - chr8_4:53582498-53582517 None:intergenic 15.0%
!!! TTTTTTTGTGAAATAGAAAA+AGG - chr8_4:53582533-53582552 None:intergenic 15.0%
!! ATTCTCTTACAATATTTAAA+TGG + chr8_4:53582560-53582579 Msa1333440:intron 15.0%
!! TTCTCTTACAATATTTAAAT+GGG + chr8_4:53582561-53582580 Msa1333440:intron 15.0%
!! TAGTATATTATTCTAATGTA+AGG + chr8_4:53583551-53583570 Msa1333440:three_prime_UTR 15.0%
!! TCCCTTAATTCATATAAATT+CGG + chr8_4:53580952-53580971 Msa1333440:five_prime_UTR 20.0%
!! TTTAAAAACCAATCAATTTC+AGG + chr8_4:53581001-53581020 Msa1333440:five_prime_UTR 20.0%
!!! GTTTTGTTTTAAAAAAGAGA+TGG - chr8_4:53581084-53581103 None:intergenic 20.0%
!!! GGATTTATTATTGTTATTGT+TGG - chr8_4:53581505-53581524 None:intergenic 20.0%
!! AGTAAAGTAAAAAATGAATG+GGG - chr8_4:53582496-53582515 None:intergenic 20.0%
!! GAATATGTTACTCAATAAAA+AGG + chr8_4:53582588-53582607 Msa1333440:intron 20.0%
!!! AAGTAAAAAGATATTTGTTG+TGG + chr8_4:53582614-53582633 Msa1333440:intron 20.0%
!!! TTAAGATTTTGTCTTGAATT+AGG + chr8_4:53582748-53582767 Msa1333440:intron 20.0%
!!! AATTAGGTAAATTTTGTCTT+GGG + chr8_4:53582764-53582783 Msa1333440:intron 20.0%
!! AGTAGCATATGTTATAATTT+AGG + chr8_4:53582825-53582844 Msa1333440:intron 20.0%
!! TATTTAATAGATAGTGAATG+AGG + chr8_4:53582903-53582922 Msa1333440:intron 20.0%
!! ATTTAATAGATAGTGAATGA+GGG + chr8_4:53582904-53582923 Msa1333440:intron 20.0%
!!! AAATTGTTGATTGATATTGT+GGG + chr8_4:53582946-53582965 Msa1333440:intron 20.0%
!! TATGATATGGTTATGATAAT+TGG + chr8_4:53583198-53583217 Msa1333440:three_prime_UTR 20.0%
!! AACGAATTGAAAAATTGAAA+TGG - chr8_4:53583316-53583335 None:intergenic 20.0%
!! ATAATATACTAATCGAGTTA+TGG - chr8_4:53583542-53583561 None:intergenic 20.0%
! TATAAGAGTTATAAGTGAGA+TGG - chr8_4:53580804-53580823 None:intergenic 25.0%
! TTTCATACTCTTCAATTCAT+TGG + chr8_4:53580825-53580844 Msa1333440:five_prime_UTR 25.0%
! CCCGAATTTATATGAATTAA+GGG - chr8_4:53580956-53580975 None:intergenic 25.0%
! CCCTTAATTCATATAAATTC+GGG + chr8_4:53580953-53580972 Msa1333440:five_prime_UTR 25.0%
! TCCCGAATTTATATGAATTA+AGG - chr8_4:53580957-53580976 None:intergenic 25.0%
! ATTAAGAAATTGCATATGAG+TGG - chr8_4:53581182-53581201 None:intergenic 25.0%
! CAATAATAAATCCACCAAAT+TGG + chr8_4:53581512-53581531 Msa1333440:CDS 25.0%
!!! TTCATAAGCTTTTTCCAATT+TGG - chr8_4:53581529-53581548 None:intergenic 25.0%
!! TCATCATCCTTTTTACTTTA+CGG + chr8_4:53581594-53581613 Msa1333440:CDS 25.0%
!!! AACAATCTACTTTTCAACTT+TGG - chr8_4:53582080-53582099 None:intergenic 25.0%
! TTGTTGAAATTGAATTACGA+CGG + chr8_4:53582098-53582117 Msa1333440:CDS 25.0%
!! AGCATTGAAATTGGTAATTA+AGG - chr8_4:53582268-53582287 None:intergenic 25.0%
!!! TTTTTTTTTCACGTGGAATA+TGG + chr8_4:53582420-53582439 Msa1333440:intron 25.0%
!!! TTTTTTTTCACGTGGAATAT+GGG + chr8_4:53582421-53582440 Msa1333440:intron 25.0%
!! GAATTAGGTAAATTTTGTCT+TGG + chr8_4:53582763-53582782 Msa1333440:intron 25.0%
!! CAAATTGTTGATTGATATTG+TGG + chr8_4:53582945-53582964 Msa1333440:intron 25.0%
!!! TGTCACAAATAGATTTGTTA+TGG + chr8_4:53582982-53583001 Msa1333440:CDS 25.0%
!!! GTCACAAATAGATTTGTTAT+GGG + chr8_4:53582983-53583002 Msa1333440:CDS 25.0%
! AGAAAATCAGATATCAAGTT+AGG + chr8_4:53583084-53583103 Msa1333440:CDS 25.0%
! ACTAGAAGAAATTAGAAAAG+AGG + chr8_4:53583165-53583184 Msa1333440:three_prime_UTR 25.0%
!! AGGAAATCTAGTTTATGATA+TGG + chr8_4:53583185-53583204 Msa1333440:three_prime_UTR 25.0%
! CATAAAGAAAACCTAAACAT+TGG - chr8_4:53583359-53583378 None:intergenic 25.0%
TAGTAAGATACAGATGAGAA+CGG - chr8_4:53580581-53580600 None:intergenic 30.0%
TTCTCATCTGTATCTTACTA+AGG + chr8_4:53580581-53580600 Msa1333440:five_prime_UTR 30.0%
ATCTGTATCTTACTAAGGTA+AGG + chr8_4:53580586-53580605 Msa1333440:five_prime_UTR 30.0%
GAGAGTAAAGAAAAGGAAAT+TGG - chr8_4:53580901-53580920 None:intergenic 30.0%
ACAAAGAACCTGAAATTGAT+TGG - chr8_4:53581012-53581031 None:intergenic 30.0%
TATTCTAAACTAAACCCCTT+TGG + chr8_4:53581042-53581061 Msa1333440:five_prime_UTR 30.0%
AAATGAAGATAAAGCCAAAG+GGG - chr8_4:53581059-53581078 None:intergenic 30.0%
CAAATGAAGATAAAGCCAAA+GGG - chr8_4:53581060-53581079 None:intergenic 30.0%
ACAAATGAAGATAAAGCCAA+AGG - chr8_4:53581061-53581080 None:intergenic 30.0%
ATTGCATATGAGTGGAAATT+GGG - chr8_4:53581174-53581193 None:intergenic 30.0%
AATTGCATATGAGTGGAAAT+TGG - chr8_4:53581175-53581194 None:intergenic 30.0%
TTGGCAAGTGAAATTCAAAA+AGG - chr8_4:53581206-53581225 None:intergenic 30.0%
! CTAAAACACGAAGACATTTT+TGG - chr8_4:53581225-53581244 None:intergenic 30.0%
!! AAAATGTCTTCGTGTTTTAG+TGG + chr8_4:53581225-53581244 Msa1333440:exon 30.0%
!! ATAAGCTTTTTCCAATTTGG+TGG - chr8_4:53581526-53581545 None:intergenic 30.0%
! TCTTTTACCTTTCAGAGTAT+TGG + chr8_4:53581566-53581585 Msa1333440:CDS 30.0%
GAATGCAGAATTGAAAGAAA+TGG + chr8_4:53582049-53582068 Msa1333440:CDS 30.0%
ACATACATTAACATCGTTTC+CGG - chr8_4:53582189-53582208 None:intergenic 30.0%
!!! ACAGGTGTTGAATTTTGATT+GGG - chr8_4:53582222-53582241 None:intergenic 30.0%
!!! AACAGGTGTTGAATTTTGAT+TGG - chr8_4:53582223-53582242 None:intergenic 30.0%
ACAAGTACGAAAACAAAAAC+AGG - chr8_4:53582240-53582259 None:intergenic 30.0%
!! GATTAAGGTACTGAAAATGT+CGG - chr8_4:53582298-53582317 None:intergenic 30.0%
GTTCAATTGACATAGTATGA+GGG - chr8_4:53582320-53582339 None:intergenic 30.0%
TGTTCAATTGACATAGTATG+AGG - chr8_4:53582321-53582340 None:intergenic 30.0%
TCCACGTGAAAAAAAAAAGA+GGG - chr8_4:53582417-53582436 None:intergenic 30.0%
TTCCACGTGAAAAAAAAAAG+AGG - chr8_4:53582418-53582437 None:intergenic 30.0%
CTTTGTGTAGTTTCAATAAC+CGG + chr8_4:53582711-53582730 Msa1333440:intron 30.0%
TTTGTCTTGGGTCAAAATTA+TGG + chr8_4:53582776-53582795 Msa1333440:intron 30.0%
TTGTCTTGGGTCAAAATTAT+GGG + chr8_4:53582777-53582796 Msa1333440:intron 30.0%
!! ATAGATTTGTTATGGGAGAA+TGG + chr8_4:53582990-53583009 Msa1333440:CDS 30.0%
! ATCTGATTTTCTTAGAGATG+AGG - chr8_4:53583076-53583095 None:intergenic 30.0%
AATCAGATATCAAGTTAGGA+AGG + chr8_4:53583088-53583107 Msa1333440:CDS 30.0%
ATTGATCATACCTTCATTCT+TGG - chr8_4:53583131-53583150 None:intergenic 30.0%
!!! GCATCGTTCTTTTTTGTTTA+TGG + chr8_4:53583228-53583247 Msa1333440:three_prime_UTR 30.0%
!!! TCTTTTTTGTTTATGGAGAG+TGG + chr8_4:53583235-53583254 Msa1333440:three_prime_UTR 30.0%
! GAGAGTGTGTAGATAGATAT+AGG - chr8_4:53580710-53580729 None:intergenic 35.0%
AGAAGGAAGTTAAAAGGGAA+AGG - chr8_4:53580741-53580760 None:intergenic 35.0%
AAAGTACAGTGAAGAAAGGA+GGG - chr8_4:53580854-53580873 None:intergenic 35.0%
! AAGGAAAGTACAGTGAAGAA+AGG - chr8_4:53580858-53580877 None:intergenic 35.0%
ATGAATTAAGGGAAAAGCGA+GGG - chr8_4:53580945-53580964 None:intergenic 35.0%
TATGAATTAAGGGAAAAGCG+AGG - chr8_4:53580946-53580965 None:intergenic 35.0%
! TTTTGTTCCCTCTACCTTTT+TGG + chr8_4:53581104-53581123 Msa1333440:five_prime_UTR 35.0%
! TTTGTTCCCTCTACCTTTTT+GGG + chr8_4:53581105-53581124 Msa1333440:five_prime_UTR 35.0%
TATATCTAAATCCAACCCGA+TGG - chr8_4:53581265-53581284 None:intergenic 35.0%
GATTCAGAGATTGTTGAAGA+AGG - chr8_4:53581342-53581361 None:intergenic 35.0%
!! TTTGATTGGGTCGTTTTCTT+GGG - chr8_4:53581407-53581426 None:intergenic 35.0%
!!! GTTTGTTTTGAGATTGGGAT+TGG - chr8_4:53581481-53581500 None:intergenic 35.0%
!!! TTGGGGTTTGTTTTGAGATT+GGG - chr8_4:53581486-53581505 None:intergenic 35.0%
!! TGATGATGATGATTTTGACG+CGG + chr8_4:53581719-53581738 Msa1333440:CDS 35.0%
! AGAAGGAATTGATAGCATCA+TGG + chr8_4:53581767-53581786 Msa1333440:CDS 35.0%
! GAAGGAATTGATAGCATCAT+GGG + chr8_4:53581768-53581787 Msa1333440:CDS 35.0%
ACCAATTTCCTTCATCAACA+TGG - chr8_4:53581908-53581927 None:intergenic 35.0%
! ATGTTGATGAAGGAAATTGG+TGG + chr8_4:53581907-53581926 Msa1333440:CDS 35.0%
! ATTTTAAGCATATCAACCGC+CGG - chr8_4:53581939-53581958 None:intergenic 35.0%
GGAGAAGAAGAAAAAGAAGA+AGG + chr8_4:53582007-53582026 Msa1333440:CDS 35.0%
GAAAAAGAAGAAGGTTGTTG+CGG + chr8_4:53582016-53582035 Msa1333440:CDS 35.0%
AATTGAATTACGACGGTGTT+CGG + chr8_4:53582105-53582124 Msa1333440:CDS 35.0%
!! GGAAAACAGAGCATTGAAAT+TGG - chr8_4:53582277-53582296 None:intergenic 35.0%
TGACATAGTATGAGGGATTA+AGG - chr8_4:53582313-53582332 None:intergenic 35.0%
!!! TCCCTCTTTTTTTTTTCACG+TGG + chr8_4:53582413-53582432 Msa1333440:intron 35.0%
CTTAACATGAACATACAGTC+CGG - chr8_4:53582733-53582752 None:intergenic 35.0%
!! CACTTTTTGTCCAACTTTTG+AGG + chr8_4:53583284-53583303 Msa1333440:three_prime_UTR 35.0%
ATGGATAGATCCTCAAAAGT+TGG - chr8_4:53583297-53583316 None:intergenic 35.0%
ATATAGCCAAAACAAGCGTT+AGG - chr8_4:53583412-53583431 None:intergenic 35.0%
TTCTTTCTTGCTCCGTATGT+GGG - chr8_4:53580538-53580557 None:intergenic 40.0%
TTTCTTTCTTGCTCCGTATG+TGG - chr8_4:53580539-53580558 None:intergenic 40.0%
TAAGATACAGATGAGAACGG+AGG - chr8_4:53580578-53580597 None:intergenic 40.0%
AGTAACATACACTTGCAGAG+TGG - chr8_4:53580620-53580639 None:intergenic 40.0%
!! TTACTCTCTCTCTCTAGAGT+CGG + chr8_4:53580635-53580654 Msa1333440:five_prime_UTR 40.0%
CTATCTACACACTCTCTCAA+CGG + chr8_4:53580714-53580733 Msa1333440:five_prime_UTR 40.0%
ACGGGAGAAGGAAGTTAAAA+GGG - chr8_4:53580746-53580765 None:intergenic 40.0%
TATAAGTGAGATGGAGACAG+AGG - chr8_4:53580795-53580814 None:intergenic 40.0%
! GAAAGTACAGTGAAGAAAGG+AGG - chr8_4:53580855-53580874 None:intergenic 40.0%
AGTGGCAGAGAGTAAAGAAA+AGG - chr8_4:53580908-53580927 None:intergenic 40.0%
TGAATTAAGGGAAAAGCGAG+GGG - chr8_4:53580944-53580963 None:intergenic 40.0%
CCTAAACCCAAAAAGGTAGA+GGG - chr8_4:53581114-53581133 None:intergenic 40.0%
!!! CCTCTACCTTTTTGGGTTTA+GGG + chr8_4:53581112-53581131 Msa1333440:five_prime_UTR 40.0%
GCTAAACCCTAAACCCAAAA+AGG - chr8_4:53581121-53581140 None:intergenic 40.0%
TGGAAATTGGGCGAAATTGA+GGG - chr8_4:53581162-53581181 None:intergenic 40.0%
!!! TCTTCGTGTTTTAGTGGAAC+AGG + chr8_4:53581231-53581250 Msa1333440:CDS 40.0%
AATCATCACCACCATGTTCA+TGG + chr8_4:53581289-53581308 Msa1333440:CDS 40.0%
TTTGTGGTGTAGATTGCAAG+CGG - chr8_4:53581375-53581394 None:intergenic 40.0%
!! TTGATTGGGTCGTTTTCTTG+GGG - chr8_4:53581406-53581425 None:intergenic 40.0%
!! GTTTGATTGGGTCGTTTTCT+TGG - chr8_4:53581408-53581427 None:intergenic 40.0%
GCTTCGTTGTAGGTTTGATT+GGG - chr8_4:53581420-53581439 None:intergenic 40.0%
AGCTTCGTTGTAGGTTTGAT+TGG - chr8_4:53581421-53581440 None:intergenic 40.0%
!!! GTTGGGGTTTGTTTTGAGAT+TGG - chr8_4:53581487-53581506 None:intergenic 40.0%
ACCATTGAACTAATCTCTCC+GGG - chr8_4:53581669-53581688 None:intergenic 40.0%
CACCATTGAACTAATCTCTC+CGG - chr8_4:53581670-53581689 None:intergenic 40.0%
TCTTCTTCTCATCCATGGAT+TGG + chr8_4:53581822-53581841 Msa1333440:CDS 40.0%
!!! TCTCATCCATGGATTGGTTT+TGG + chr8_4:53581828-53581847 Msa1333440:CDS 40.0%
! GCCATGTTGATGAAGGAAAT+TGG + chr8_4:53581904-53581923 Msa1333440:CDS 40.0%
AGGAAATTGGTGGAATTTCC+CGG + chr8_4:53581917-53581936 Msa1333440:CDS 40.0%
! TTTTAAGCATATCAACCGCC+GGG - chr8_4:53581938-53581957 None:intergenic 40.0%
! TTTTTCTTCTTCTCCGTCAC+CGG - chr8_4:53582002-53582021 None:intergenic 40.0%
TGATTGATATTGTGGGAGAC+AGG + chr8_4:53582953-53582972 Msa1333440:intron 40.0%
!! GATTTGTTATGGGAGAATGG+AGG + chr8_4:53582993-53583012 Msa1333440:CDS 40.0%
! AACAAGCCTAACGCTTGTTT+TGG + chr8_4:53583403-53583422 Msa1333440:three_prime_UTR 40.0%
AACATACACTTGCAGAGTGG+AGG - chr8_4:53580617-53580636 None:intergenic 45.0%
CACGGGAGAAGGAAGTTAAA+AGG - chr8_4:53580747-53580766 None:intergenic 45.0%
ACTTTCCTTTCTCCTCTCCT+CGG + chr8_4:53580869-53580888 Msa1333440:five_prime_UTR 45.0%
!!! CCCTCTACCTTTTTGGGTTT+AGG + chr8_4:53581111-53581130 Msa1333440:five_prime_UTR 45.0%
CCCTAAACCCAAAAAGGTAG+AGG - chr8_4:53581115-53581134 None:intergenic 45.0%
AATTGGGCGAAATTGAGGGT+AGG - chr8_4:53581158-53581177 None:intergenic 45.0%
GTGGAAATTGGGCGAAATTG+AGG - chr8_4:53581163-53581182 None:intergenic 45.0%
!!! TCGTGTTTTAGTGGAACAGG+AGG + chr8_4:53581234-53581253 Msa1333440:CDS 45.0%
GATGTTCGACTCCATGAACA+TGG - chr8_4:53581303-53581322 None:intergenic 45.0%
GGTTTGGGTATGCAGTGTTA+AGG - chr8_4:53581452-53581471 None:intergenic 45.0%
TGGGATTGGAGAAGAGGTTT+GGG - chr8_4:53581467-53581486 None:intergenic 45.0%
TTGGGATTGGAGAAGAGGTT+TGG - chr8_4:53581468-53581487 None:intergenic 45.0%
TGAGATTGGGATTGGAGAAG+AGG - chr8_4:53581473-53581492 None:intergenic 45.0%
GACGTGTCCAATACTCTGAA+AGG - chr8_4:53581576-53581595 None:intergenic 45.0%
GGGCTTGCCGTAAAGTAAAA+AGG - chr8_4:53581604-53581623 None:intergenic 45.0%
!!! TTTTGGCTCCGACTGGAAAT+CGG - chr8_4:53581625-53581644 None:intergenic 45.0%
!!! TGACATGGTTTCACCGGTTT+TGG - chr8_4:53581642-53581661 None:intergenic 45.0%
! TCCCGGAGAGATTAGTTCAA+TGG + chr8_4:53581665-53581684 Msa1333440:CDS 45.0%
CTCGACGAGGAAATTGAAGA+AGG + chr8_4:53581750-53581769 Msa1333440:CDS 45.0%
! GGAATTGATAGCATCATGGG+AGG + chr8_4:53581771-53581790 Msa1333440:CDS 45.0%
CATCATGGGAGGTAGAATTG+AGG + chr8_4:53581782-53581801 Msa1333440:CDS 45.0%
ACGTCTCTTCTTCTCATCCA+TGG + chr8_4:53581817-53581836 Msa1333440:CDS 45.0%
!!! CATCCATGGATTGGTTTTGG+CGG + chr8_4:53581831-53581850 Msa1333440:CDS 45.0%
!!! ATCCATGGATTGGTTTTGGC+GGG + chr8_4:53581832-53581851 Msa1333440:CDS 45.0%
TTCCGGTTAGGATTACAGAG+AGG + chr8_4:53581864-53581883 Msa1333440:CDS 45.0%
CACCTCTCTGTAATCCTAAC+CGG - chr8_4:53581869-53581888 None:intergenic 45.0%
AAATTGGTGGAATTTCCCGG+CGG + chr8_4:53581920-53581939 Msa1333440:CDS 45.0%
TCGCCCAAAATATGCAGTGT+CGG + chr8_4:53581960-53581979 Msa1333440:CDS 45.0%
! CCACCGACACTGCATATTTT+GGG - chr8_4:53581966-53581985 None:intergenic 45.0%
! ACCACCGACACTGCATATTT+TGG - chr8_4:53581967-53581986 None:intergenic 45.0%
AAAGAAGAAGGTTGTTGCGG+TGG + chr8_4:53582019-53582038 Msa1333440:CDS 45.0%
! AACATCGTTTCCGGAAGCAT+CGG - chr8_4:53582180-53582199 None:intergenic 45.0%
TTGTTATGGGAGAATGGAGG+AGG + chr8_4:53582996-53583015 Msa1333440:CDS 45.0%
ACCAACGCAACAACCACAAA+GGG - chr8_4:53583264-53583283 None:intergenic 45.0%
TGCAGTCTGCACCAATGTTT+AGG + chr8_4:53583345-53583364 Msa1333440:three_prime_UTR 45.0%
ATGGAGACAGAGGAGAGAGA+GGG - chr8_4:53580785-53580804 None:intergenic 50.0%
GTACAGTGAAGAAAGGAGGG+TGG - chr8_4:53580851-53580870 None:intergenic 50.0%
CTTTCCTTTCTCCTCTCCTC+GGG + chr8_4:53580870-53580889 Msa1333440:five_prime_UTR 50.0%
!! AAGGAAATTGGTGTTGCCCG+AGG - chr8_4:53580889-53580908 None:intergenic 50.0%
GGAACAGGAGGAAGAACCAT+CGG + chr8_4:53581246-53581265 Msa1333440:CDS 50.0%
GAACAGGAGGAAGAACCATC+GGG + chr8_4:53581247-53581266 Msa1333440:CDS 50.0%
GTTCGACTCCATGAACATGG+TGG - chr8_4:53581300-53581319 None:intergenic 50.0%
!!! TCTTGGGGTTCTGGGTTTTG+TGG - chr8_4:53581391-53581410 None:intergenic 50.0%
!! GGTCGTTTTCTTGGGGTTCT+GGG - chr8_4:53581399-53581418 None:intergenic 50.0%
! GAGTGTTGCAGCTTCGTTGT+AGG - chr8_4:53581430-53581449 None:intergenic 50.0%
! TTTGGCTCCGACTGGAAATC+GGG - chr8_4:53581624-53581643 None:intergenic 50.0%
TTTCCAGTCGGAGCCAAAAC+CGG + chr8_4:53581626-53581645 Msa1333440:CDS 50.0%
GGACTCTGACATGGTTTCAC+CGG - chr8_4:53581648-53581667 None:intergenic 50.0%
GTGAAACCATGTCAGAGTCC+CGG + chr8_4:53581648-53581667 Msa1333440:CDS 50.0%
TTCCCGCCAAAACCAATCCA+TGG - chr8_4:53581837-53581856 None:intergenic 50.0%
TTGGCGGGAAATTCGACTTC+CGG + chr8_4:53581847-53581866 Msa1333440:CDS 50.0%
GGGAAATTCGACTTCCGGTT+AGG + chr8_4:53581852-53581871 Msa1333440:CDS 50.0%
CGGTTAGGATTACAGAGAGG+TGG + chr8_4:53581867-53581886 Msa1333440:CDS 50.0%
! GCTCTTCGCCATGTTGATGA+AGG + chr8_4:53581897-53581916 Msa1333440:CDS 50.0%
! CCCAAAATATGCAGTGTCGG+TGG + chr8_4:53581963-53581982 Msa1333440:CDS 50.0%
!! ATGCAGTGTCGGTGGTAAGA+CGG + chr8_4:53581971-53581990 Msa1333440:CDS 50.0%
GATATTGTGGGAGACAGGCA+CGG + chr8_4:53582958-53582977 Msa1333440:intron 50.0%
TTCTTTGTAACGCAGCACGC+TGG - chr8_4:53583039-53583058 None:intergenic 50.0%
GGAAGGTCAATGCAGATCGA+CGG + chr8_4:53583105-53583124 Msa1333440:CDS 50.0%
AGATCGACGGCCAAGAATGA+AGG + chr8_4:53583118-53583137 Msa1333440:CDS 50.0%
CAACGCAACAACCACAAAGG+GGG - chr8_4:53583262-53583281 None:intergenic 50.0%
CCAACGCAACAACCACAAAG+GGG - chr8_4:53583263-53583282 None:intergenic 50.0%
GACCAACGCAACAACCACAA+AGG - chr8_4:53583265-53583284 None:intergenic 50.0%
!! CTCTCTCTCTCTAGAGTCGG+TGG + chr8_4:53580638-53580657 Msa1333440:five_prime_UTR 55.0%
AGAGAGAGGGAGAGAGATGG+GGG - chr8_4:53580772-53580791 None:intergenic 55.0%
GAGAGAGAGGGAGAGAGATG+GGG - chr8_4:53580773-53580792 None:intergenic 55.0%
GGAGAGAGAGGGAGAGAGAT+GGG - chr8_4:53580774-53580793 None:intergenic 55.0%
AGGAGAGAGAGGGAGAGAGA+TGG - chr8_4:53580775-53580794 None:intergenic 55.0%
GATGGAGACAGAGGAGAGAG+AGG - chr8_4:53580786-53580805 None:intergenic 55.0%
!! AATTGGTGTTGCCCGAGGAG+AGG - chr8_4:53580884-53580903 None:intergenic 55.0%
TAAGGGAAAAGCGAGGGGCA+GGG - chr8_4:53580939-53580958 None:intergenic 55.0%
TTAAGGGAAAAGCGAGGGGC+AGG - chr8_4:53580940-53580959 None:intergenic 55.0%
AGGAGGAAGAACCATCGGGT+TGG + chr8_4:53581251-53581270 Msa1333440:CDS 55.0%
!! GGGTCGTTTTCTTGGGGTTC+TGG - chr8_4:53581400-53581419 None:intergenic 55.0%
ATCTCTCCGGGACTCTGACA+TGG - chr8_4:53581657-53581676 None:intergenic 55.0%
CGCGGAATCAATACTCGACG+AGG + chr8_4:53581737-53581756 Msa1333440:CDS 55.0%
ACGACGGTGTTCGGAAAGCT+TGG + chr8_4:53582114-53582133 Msa1333440:CDS 55.0%
ATCGGAGACAGGGCTGTCAT+CGG - chr8_4:53582162-53582181 None:intergenic 55.0%
!! TTCCGGAAGCATCGGAGACA+GGG - chr8_4:53582172-53582191 None:intergenic 55.0%
!! TTTCCGGAAGCATCGGAGAC+AGG - chr8_4:53582173-53582192 None:intergenic 55.0%
TGGGAGAATGGAGGAGGAAG+TGG + chr8_4:53583002-53583021 Msa1333440:CDS 55.0%
CCCCTTTGTGGTTGTTGCGT+TGG + chr8_4:53583260-53583279 Msa1333440:three_prime_UTR 55.0%
GAGAGAGGGAGAGAGATGGG+GGG - chr8_4:53580771-53580790 None:intergenic 60.0%
GTTGCCCGAGGAGAGGAGAA+AGG - chr8_4:53580877-53580896 None:intergenic 60.0%
!! AGGGGCAGGGCATTGCAAAG+TGG - chr8_4:53580926-53580945 None:intergenic 60.0%
CGGCAAGCCCGATTTCCAGT+CGG + chr8_4:53581614-53581633 Msa1333440:CDS 60.0%
!!! TCACCGGTTTTGGCTCCGAC+TGG - chr8_4:53581632-53581651 None:intergenic 60.0%
!! CAGTGTCGGTGGTAAGACGG+CGG + chr8_4:53581974-53581993 Msa1333440:CDS 60.0%
CGGAAAGCTTGGTCTGACCG+AGG + chr8_4:53582125-53582144 Msa1333440:CDS 60.0%
ACAGGGCTGTCATCGGCGAA+CGG - chr8_4:53582155-53582174 None:intergenic 60.0%
AGCCCTGTCTCCGATGCTTC+CGG + chr8_4:53582167-53582186 Msa1333440:CDS 60.0%
TGGAGAGTGGACCCCCTTTG+TGG + chr8_4:53583248-53583267 Msa1333440:three_prime_UTR 60.0%
AGATGGGGGGTCACGGGAGA+AGG - chr8_4:53580758-53580777 None:intergenic 65.0%
GGAGAGAGATGGGGGGTCAC+GGG - chr8_4:53580764-53580783 None:intergenic 65.0%
GGGAGAGAGATGGGGGGTCA+CGG - chr8_4:53580765-53580784 None:intergenic 65.0%
CATCGGCGAACGGCGTTCCT+CGG - chr8_4:53582145-53582164 None:intergenic 65.0%
!! TAAGACGGCGGCGCCGGTGA+CGG + chr8_4:53581986-53582005 Msa1333440:CDS 70.0%
CGGTGGTAAGACGGCGGCGC+CGG + chr8_4:53581980-53581999 Msa1333440:CDS 75.0%
Chromosome Type Strat End Strand Name
chr8_4 gene 53580526 53583632 53580526 ID=Msa1333440;Name=Msa1333440
chr8_4 mRNA 53580526 53583632 53580526 ID=Msa1333440-mRNA-1;Parent=Msa1333440;Name=Msa1333440-mRNA-1;_AED=0.07;_eAED=0.07;_QI=702|1|1|1|1|1|2|487|381
chr8_4 exon 53580526 53582202 53580526 ID=Msa1333440-mRNA-1:exon:16428;Parent=Msa1333440-mRNA-1
chr8_4 exon 53582975 53583632 53582975 ID=Msa1333440-mRNA-1:exon:16429;Parent=Msa1333440-mRNA-1
chr8_4 five_prime_UTR 53580526 53581227 53580526 ID=Msa1333440-mRNA-1:five_prime_utr;Parent=Msa1333440-mRNA-1
chr8_4 CDS 53581228 53582202 53581228 ID=Msa1333440-mRNA-1:cds;Parent=Msa1333440-mRNA-1
chr8_4 CDS 53582975 53583145 53582975 ID=Msa1333440-mRNA-1:cds;Parent=Msa1333440-mRNA-1
chr8_4 three_prime_UTR 53583146 53583632 53583146 ID=Msa1333440-mRNA-1:three_prime_utr;Parent=Msa1333440-mRNA-1
Gene Sequence

>Msa1333440

ATGTCTTCGTGTTTTAGTGGAACAGGAGGAAGAACCATCGGGTTGGATTTAGATATAGTTAAATCATCACCACCATGTTCATGGAGTCGAACATCACAAACATCTTCTTCACCTTCTTCAACAATCTCTGAATCAAGCAATTCACCGCTTGCAATCTACACCACAAAACCCAGAACCCCAAGAAAACGACCCAATCAAACCTACAACGAAGCTGCAACACTCCTTAACACTGCATACCCAAACCTCTTCTCCAATCCCAATCTCAAAACAAACCCCAACAATAACAATAATAAATCCACCAAATTGGAAAAAGCTTATGAATTCGACTCTTCTGAACTTCTTTTACCTTTCAGAGTATTGGACACGTCATCATCCTTTTTACTTTACGGCAAGCCCGATTTCCAGTCGGAGCCAAAACCGGTGAAACCATGTCAGAGTCCCGGAGAGATTAGTTCAATGGTGAATTGTCTTGAATTGAACGACGATGATGATGATGATGATGATTTTGACGCGGAATCAATACTCGACGAGGAAATTGAAGAAGGAATTGATAGCATCATGGGAGGTAGAATTGAGGAGAATGAATCTAACGTCTCTTCTTCTCATCCATGGATTGGTTTTGGCGGGAAATTCGACTTCCGGTTAGGATTACAGAGAGGTGGAGTGAGAGCTCTTCGCCATGTTGATGAAGGAAATTGGTGGAATTTCCCGGCGGTTGATATGCTTAAAATTTCGCCCAAAATATGCAGTGTCGGTGGTAAGACGGCGGCGCCGGTGACGGAGAAGAAGAAAAAGAAGAAGGTTGTTGCGGTGGAGAGACTGAATGCAGAATTGAAAGAAATGGAATCGCCAAAGTTGAAAAGTAGATTGTTGTTGAAATTGAATTACGACGGTGTTCGGAAAGCTTGGTCTGACCGAGGAACGCCGTTCGCCGATGACAGCCCTGTCTCCGATGCTTCCGGAAACGATGTTAATGCACGGTTGTCACAAATAGATTTGTTATGGGAGAATGGAGGAGGAAGTGGTGTAAGAGAAGCCAGCGTGCTGCGTTACAAAGAAAAGCGTCGTACACGCCTCATCTCTAAGAAAATCAGATATCAAGTTAGGAAGGTCAATGCAGATCGACGGCCAAGAATGAAGGTATGA

Protein sequence

>Msa1333440

MSSCFSGTGGRTIGLDLDIVKSSPPCSWSRTSQTSSSPSSTISESSNSPLAIYTTKPRTPRKRPNQTYNEAATLLNTAYPNLFSNPNLKTNPNNNNNKSTKLEKAYEFDSSELLLPFRVLDTSSSFLLYGKPDFQSEPKPVKPCQSPGEISSMVNCLELNDDDDDDDDFDAESILDEEIEEGIDSIMGGRIEENESNVSSSHPWIGFGGKFDFRLGLQRGGVRALRHVDEGNWWNFPAVDMLKISPKICSVGGKTAAPVTEKKKKKKVVAVERLNAELKEMESPKLKSRLLLKLNYDGVRKAWSDRGTPFADDSPVSDASGNDVNARLSQIDLLWENGGGSGVREASVLRYKEKRRTRLISKKIRYQVRKVNADRRPRMKV*