Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1216720 | XP_003609543.1 | 98.165 | 218 | 4 | 0 | 1 | 218 | 1 | 218 | 6.09e-156 | 441 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1216720 | G7JHW1 | 98.165 | 218 | 4 | 0 | 1 | 218 | 1 | 218 | 2.91e-156 | 441 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0006110 | Msa1216720 | 0.800162 | 1.640131e-48 | -8.615850e-47 |
| Msa0015120 | Msa1216720 | 0.802016 | 6.852998e-49 | -8.615850e-47 |
| Msa0020410 | Msa1216720 | 0.813927 | 1.997541e-51 | -8.615850e-47 |
| Msa0029260 | Msa1216720 | 0.812350 | 4.432446e-51 | -8.615850e-47 |
| Msa0030300 | Msa1216720 | 0.815685 | 8.145343e-52 | -8.615850e-47 |
| Msa0031180 | Msa1216720 | 0.810060 | 1.390665e-50 | -8.615850e-47 |
| Msa0032860 | Msa1216720 | 0.803952 | 2.726578e-49 | -8.615850e-47 |
| Msa0033880 | Msa1216720 | 0.803729 | 3.033097e-49 | -8.615850e-47 |
| Msa0037160 | Msa1216720 | 0.801046 | 1.083219e-48 | -8.615850e-47 |
| Msa0051630 | Msa1216720 | 0.801762 | 7.725105e-49 | -8.615850e-47 |
| Msa0051740 | Msa1216720 | 0.802110 | 6.553140e-49 | -8.615850e-47 |
| Msa0051750 | Msa1216720 | 0.814783 | 1.292371e-51 | -8.615850e-47 |
| Msa0052800 | Msa1216720 | 0.802416 | 5.669791e-49 | -8.615850e-47 |
| Msa0054440 | Msa1216720 | 0.812092 | 5.043530e-51 | -8.615850e-47 |
| Msa0054480 | Msa1216720 | 0.804964 | 1.677359e-49 | -8.615850e-47 |
| Msa0054820 | Msa1216720 | 0.817862 | 2.645506e-52 | -8.615850e-47 |
| Msa0056030 | Msa1216720 | 0.801570 | 8.461630e-49 | -8.615850e-47 |
| Msa0061080 | Msa1216720 | 0.813256 | 2.806991e-51 | -8.615850e-47 |
| Msa0078900 | Msa1216720 | 0.800495 | 1.403061e-48 | -8.615850e-47 |
| Msa0081650 | Msa1216720 | 0.817400 | 3.363431e-52 | -8.615850e-47 |
| Msa0084080 | Msa1216720 | 0.809490 | 1.843768e-50 | -8.615850e-47 |
| Msa0085370 | Msa1216720 | 0.807662 | 4.530321e-50 | -8.615850e-47 |
| Msa0086420 | Msa1216720 | 0.801975 | 6.985027e-49 | -8.615850e-47 |
| Msa0090360 | Msa1216720 | 0.802265 | 6.089191e-49 | -8.615850e-47 |
| Msa0090520 | Msa1216720 | 0.822126 | 2.798355e-53 | -8.615850e-47 |
| Msa0097590 | Msa1216720 | 0.807364 | 5.239687e-50 | -8.615850e-47 |
| Msa0097610 | Msa1216720 | 0.811344 | 7.339324e-51 | -8.615850e-47 |
| Msa0100160 | Msa1216720 | 0.805046 | 1.612493e-49 | -8.615850e-47 |
| Msa0102270 | Msa1216720 | 0.805815 | 1.112538e-49 | -8.615850e-47 |
| Msa0105620 | Msa1216720 | 0.815546 | 8.744668e-52 | -8.615850e-47 |
| Msa0112770 | Msa1216720 | 0.810106 | 1.359032e-50 | -8.615850e-47 |
| Msa0610130 | Msa1216720 | 0.810715 | 1.004201e-50 | -8.615850e-47 |
| Msa0610180 | Msa1216720 | 0.800057 | 1.723248e-48 | -8.615850e-47 |
| Msa0618950 | Msa1216720 | 0.809550 | 1.790562e-50 | -8.615850e-47 |
| Msa0620620 | Msa1216720 | 0.833563 | 4.964082e-56 | -8.615850e-47 |
| Msa0625720 | Msa1216720 | 0.808844 | 2.536418e-50 | -8.615850e-47 |
| Msa0637900 | Msa1216720 | 0.802060 | 6.711415e-49 | -8.615850e-47 |
| Msa0641140 | Msa1216720 | 0.800408 | 1.461690e-48 | -8.615850e-47 |
| Msa0641190 | Msa1216720 | 0.801688 | 8.000817e-49 | -8.615850e-47 |
| Msa0663390 | Msa1216720 | 0.817555 | 3.103617e-52 | -8.615850e-47 |
| Msa0667770 | Msa1216720 | 0.803617 | 3.200066e-49 | -8.615850e-47 |
| Msa0667790 | Msa1216720 | 0.804148 | 2.482781e-49 | -8.615850e-47 |
| Msa0687020 | Msa1216720 | 0.808714 | 2.704081e-50 | -8.615850e-47 |
| Msa0691290 | Msa1216720 | 0.832862 | 7.419873e-56 | -8.615850e-47 |
| Msa0693380 | Msa1216720 | 0.808602 | 2.857805e-50 | -8.615850e-47 |
| Msa0695130 | Msa1216720 | 0.802673 | 5.016735e-49 | -8.615850e-47 |
| Msa0703910 | Msa1216720 | 0.800431 | 1.445677e-48 | -8.615850e-47 |
| Msa0704920 | Msa1216720 | 0.821297 | 4.351056e-53 | -8.615850e-47 |
| Msa0705390 | Msa1216720 | 0.807752 | 4.336332e-50 | -8.615850e-47 |
| Msa0706400 | Msa1216720 | 0.803141 | 4.016013e-49 | -8.615850e-47 |
| Msa0708520 | Msa1216720 | 0.800258 | 1.567943e-48 | -8.615850e-47 |
| Msa0709160 | Msa1216720 | 0.817786 | 2.752041e-52 | -8.615850e-47 |
| Msa0709500 | Msa1216720 | 0.817811 | 2.717441e-52 | -8.615850e-47 |
| Msa0711780 | Msa1216720 | 0.815589 | 8.555420e-52 | -8.615850e-47 |
| Msa0716960 | Msa1216720 | 0.831173 | 1.940056e-55 | -8.615850e-47 |
| Msa0717010 | Msa1216720 | 0.829286 | 5.604569e-55 | -8.615850e-47 |
| Msa0721280 | Msa1216720 | 0.838992 | 2.068303e-57 | -8.615850e-47 |
| Msa0724830 | Msa1216720 | 0.811246 | 7.705029e-51 | -8.615850e-47 |
| Msa0726860 | Msa1216720 | 0.805932 | 1.051427e-49 | -8.615850e-47 |
| Msa0741070 | Msa1216720 | 0.810302 | 1.233300e-50 | -8.615850e-47 |
| Msa0762970 | Msa1216720 | 0.807843 | 4.146201e-50 | -8.615850e-47 |
| Msa0765380 | Msa1216720 | 0.802537 | 5.352129e-49 | -8.615850e-47 |
| Msa0777320 | Msa1216720 | 0.808267 | 3.368924e-50 | -8.615850e-47 |
| Msa0781270 | Msa1216720 | 0.801219 | 9.984838e-49 | -8.615850e-47 |
| Msa0784380 | Msa1216720 | 0.813163 | 2.941770e-51 | -8.615850e-47 |
| Msa0790850 | Msa1216720 | 0.812668 | 3.775294e-51 | -8.615850e-47 |
| Msa0793140 | Msa1216720 | -0.810846 | 9.406948e-51 | -8.615850e-47 |
| Msa0794670 | Msa1216720 | 0.813251 | 2.813008e-51 | -8.615850e-47 |
| Msa0796260 | Msa1216720 | 0.805465 | 1.317702e-49 | -8.615850e-47 |
| Msa0805430 | Msa1216720 | 0.813832 | 2.096036e-51 | -8.615850e-47 |
| Msa0817460 | Msa1216720 | 0.814373 | 1.592488e-51 | -8.615850e-47 |
| Msa0821190 | Msa1216720 | 0.824209 | 9.136508e-54 | -8.615850e-47 |
| Msa0824660 | Msa1216720 | 0.808040 | 3.764803e-50 | -8.615850e-47 |
| Msa0826760 | Msa1216720 | 0.818388 | 2.012188e-52 | -8.615850e-47 |
| Msa0827280 | Msa1216720 | 0.811258 | 7.658844e-51 | -8.615850e-47 |
| Msa0830540 | Msa1216720 | 0.800812 | 1.208895e-48 | -8.615850e-47 |
| Msa0831100 | Msa1216720 | 0.802445 | 5.590475e-49 | -8.615850e-47 |
| Msa0832150 | Msa1216720 | 0.822999 | 1.754131e-53 | -8.615850e-47 |
| Msa0127850 | Msa1216720 | 0.811013 | 8.658312e-51 | -8.615850e-47 |
| Msa0135420 | Msa1216720 | 0.800695 | 1.277181e-48 | -8.615850e-47 |
| Msa0137840 | Msa1216720 | 0.801885 | 7.291348e-49 | -8.615850e-47 |
| Msa0137990 | Msa1216720 | 0.817974 | 2.495910e-52 | -8.615850e-47 |
| Msa0159420 | Msa1216720 | 0.818331 | 2.072581e-52 | -8.615850e-47 |
| Msa0169300 | Msa1216720 | 0.813944 | 1.980999e-51 | -8.615850e-47 |
| Msa0171540 | Msa1216720 | 0.813586 | 2.374964e-51 | -8.615850e-47 |
| Msa0178510 | Msa1216720 | 0.802540 | 5.343875e-49 | -8.615850e-47 |
| Msa0178930 | Msa1216720 | 0.802744 | 4.851100e-49 | -8.615850e-47 |
| Msa0183900 | Msa1216720 | 0.812274 | 4.604702e-51 | -8.615850e-47 |
| Msa0184040 | Msa1216720 | 0.805148 | 1.535119e-49 | -8.615850e-47 |
| Msa0187250 | Msa1216720 | 0.807440 | 5.049542e-50 | -8.615850e-47 |
| Msa0189300 | Msa1216720 | 0.826848 | 2.165494e-54 | -8.615850e-47 |
| Msa0212990 | Msa1216720 | 0.808775 | 2.624460e-50 | -8.615850e-47 |
| Msa0229170 | Msa1216720 | 0.807747 | 4.346940e-50 | -8.615850e-47 |
| Msa0231660 | Msa1216720 | 0.812556 | 3.994479e-51 | -8.615850e-47 |
| Msa0233370 | Msa1216720 | 0.818467 | 1.930549e-52 | -8.615850e-47 |
| Msa0365100 | Msa1216720 | 0.801099 | 1.056233e-48 | -8.615850e-47 |
| Msa0372660 | Msa1216720 | 0.809650 | 1.704232e-50 | -8.615850e-47 |
| Msa0376910 | Msa1216720 | 0.810315 | 1.225494e-50 | -8.615850e-47 |
| Msa0378970 | Msa1216720 | 0.809377 | 1.950048e-50 | -8.615850e-47 |
| Msa0392270 | Msa1216720 | 0.821006 | 5.077777e-53 | -8.615850e-47 |
| Msa0406770 | Msa1216720 | 0.824377 | 8.343265e-54 | -8.615850e-47 |
| Msa0410300 | Msa1216720 | 0.801122 | 1.045154e-48 | -8.615850e-47 |
| Msa0412840 | Msa1216720 | 0.812142 | 4.920599e-51 | -8.615850e-47 |
| Msa0413730 | Msa1216720 | 0.815333 | 9.756470e-52 | -8.615850e-47 |
| Msa0433400 | Msa1216720 | 0.804678 | 1.925044e-49 | -8.615850e-47 |
| Msa0452710 | Msa1216720 | 0.812094 | 5.040340e-51 | -8.615850e-47 |
| Msa0457510 | Msa1216720 | 0.800582 | 1.347201e-48 | -8.615850e-47 |
| Msa0468320 | Msa1216720 | 0.802115 | 6.537517e-49 | -8.615850e-47 |
| Msa0471900 | Msa1216720 | 0.803862 | 2.847123e-49 | -8.615850e-47 |
| Msa0474940 | Msa1216720 | 0.803966 | 2.708174e-49 | -8.615850e-47 |
| Msa0479170 | Msa1216720 | 0.809887 | 1.514923e-50 | -8.615850e-47 |
| Msa0481530 | Msa1216720 | 0.827735 | 1.327630e-54 | -8.615850e-47 |
| Msa0990580 | Msa1216720 | 0.839744 | 1.319542e-57 | -8.615850e-47 |
| Msa1002850 | Msa1216720 | 0.816365 | 5.743366e-52 | -8.615850e-47 |
| Msa1006840 | Msa1216720 | 0.801505 | 8.722231e-49 | -8.615850e-47 |
| Msa1009750 | Msa1216720 | 0.800341 | 1.508131e-48 | -8.615850e-47 |
| Msa1014420 | Msa1216720 | 0.806696 | 7.255800e-50 | -8.615850e-47 |
| Msa1021540 | Msa1216720 | 0.802181 | 6.337700e-49 | -8.615850e-47 |
| Msa1024680 | Msa1216720 | 0.800512 | 1.391854e-48 | -8.615850e-47 |
| Msa1024750 | Msa1216720 | 0.816531 | 5.270697e-52 | -8.615850e-47 |
| Msa1029070 | Msa1216720 | 0.823226 | 1.552066e-53 | -8.615850e-47 |
| Msa1031770 | Msa1216720 | 0.816043 | 6.777745e-52 | -8.615850e-47 |
| Msa1031930 | Msa1216720 | 0.803022 | 4.250557e-49 | -8.615850e-47 |
| Msa1041210 | Msa1216720 | 0.801200 | 1.007097e-48 | -8.615850e-47 |
| Msa1050420 | Msa1216720 | 0.805420 | 1.346231e-49 | -8.615850e-47 |
| Msa1051330 | Msa1216720 | 0.826081 | 3.298333e-54 | -8.615850e-47 |
| Msa1063420 | Msa1216720 | 0.822198 | 2.692931e-53 | -8.615850e-47 |
| Msa1080270 | Msa1216720 | 0.844288 | 8.293031e-59 | -8.615850e-47 |
| Msa1080640 | Msa1216720 | 0.806193 | 9.264975e-50 | -8.615850e-47 |
| Msa1082500 | Msa1216720 | 0.812643 | 3.823383e-51 | -8.615850e-47 |
| Msa1087980 | Msa1216720 | 0.804372 | 2.229636e-49 | -8.615850e-47 |
| Msa1089320 | Msa1216720 | 0.838452 | 2.852173e-57 | -8.615850e-47 |
| Msa1089460 | Msa1216720 | 0.811796 | 5.852910e-51 | -8.615850e-47 |
| Msa1093530 | Msa1216720 | 0.805755 | 1.145323e-49 | -8.615850e-47 |
| Msa1093840 | Msa1216720 | 0.807879 | 4.074439e-50 | -8.615850e-47 |
| Msa1097820 | Msa1216720 | 0.801138 | 1.036987e-48 | -8.615850e-47 |
| Msa1098890 | Msa1216720 | 0.805920 | 1.057671e-49 | -8.615850e-47 |
| Msa1100720 | Msa1216720 | 0.808921 | 2.442520e-50 | -8.615850e-47 |
| Msa0239800 | Msa1216720 | 0.801693 | 7.982251e-49 | -8.615850e-47 |
| Msa0241140 | Msa1216720 | 0.803447 | 3.470815e-49 | -8.615850e-47 |
| Msa0241470 | Msa1216720 | 0.803204 | 3.897047e-49 | -8.615850e-47 |
| Msa0251770 | Msa1216720 | 0.815230 | 1.028436e-51 | -8.615850e-47 |
| Msa0253290 | Msa1216720 | 0.806089 | 9.740817e-50 | -8.615850e-47 |
| Msa0259210 | Msa1216720 | 0.800210 | 1.603668e-48 | -8.615850e-47 |
| Msa0259220 | Msa1216720 | 0.800491 | 1.406107e-48 | -8.615850e-47 |
| Msa0271360 | Msa1216720 | 0.803726 | 3.037349e-49 | -8.615850e-47 |
| Msa0271530 | Msa1216720 | 0.840137 | 1.042112e-57 | -8.615850e-47 |
| Msa0278580 | Msa1216720 | 0.812117 | 4.982155e-51 | -8.615850e-47 |
| Msa0279220 | Msa1216720 | 0.809910 | 1.497947e-50 | -8.615850e-47 |
| Msa0284410 | Msa1216720 | 0.813780 | 2.152168e-51 | -8.615850e-47 |
| Msa0292120 | Msa1216720 | 0.828856 | 7.122488e-55 | -8.615850e-47 |
| Msa0306210 | Msa1216720 | -0.802356 | 5.832828e-49 | -8.615850e-47 |
| Msa0307310 | Msa1216720 | 0.812241 | 4.680586e-51 | -8.615850e-47 |
| Msa0309750 | Msa1216720 | 0.806645 | 7.440071e-50 | -8.615850e-47 |
| Msa0309770 | Msa1216720 | 0.802062 | 6.703412e-49 | -8.615850e-47 |
| Msa0311720 | Msa1216720 | 0.815113 | 1.091831e-51 | -8.615850e-47 |
| Msa0317510 | Msa1216720 | 0.805007 | 1.643242e-49 | -8.615850e-47 |
| Msa0317960 | Msa1216720 | 0.813139 | 2.977371e-51 | -8.615850e-47 |
| Msa0324240 | Msa1216720 | 0.817614 | 3.009665e-52 | -8.615850e-47 |
| Msa0326480 | Msa1216720 | 0.802308 | 5.966773e-49 | -8.615850e-47 |
| Msa0330340 | Msa1216720 | 0.806488 | 8.029746e-50 | -8.615850e-47 |
| Msa0336310 | Msa1216720 | 0.807794 | 4.246516e-50 | -8.615850e-47 |
| Msa0336320 | Msa1216720 | 0.803042 | 4.210279e-49 | -8.615850e-47 |
| Msa0339910 | Msa1216720 | 0.809107 | 2.227680e-50 | -8.615850e-47 |
| Msa0360210 | Msa1216720 | 0.827008 | 1.983205e-54 | -8.615850e-47 |
| Msa1125760 | Msa1216720 | 0.809014 | 2.332773e-50 | -8.615850e-47 |
| Msa1126450 | Msa1216720 | 0.822736 | 2.019614e-53 | -8.615850e-47 |
| Msa1133400 | Msa1216720 | 0.802145 | 6.444548e-49 | -8.615850e-47 |
| Msa1156160 | Msa1216720 | 0.812413 | 4.294201e-51 | -8.615850e-47 |
| Msa1157740 | Msa1216720 | 0.832713 | 8.077908e-56 | -8.615850e-47 |
| Msa1158230 | Msa1216720 | 0.814775 | 1.297366e-51 | -8.615850e-47 |
| Msa1160590 | Msa1216720 | 0.801673 | 8.059615e-49 | -8.615850e-47 |
| Msa1171360 | Msa1216720 | 0.819461 | 1.147214e-52 | -8.615850e-47 |
| Msa1171830 | Msa1216720 | 0.808283 | 3.341549e-50 | -8.615850e-47 |
| Msa1173170 | Msa1216720 | 0.803961 | 2.715118e-49 | -8.615850e-47 |
| Msa1174850 | Msa1216720 | 0.810496 | 1.119910e-50 | -8.615850e-47 |
| Msa1178060 | Msa1216720 | 0.811382 | 7.200491e-51 | -8.615850e-47 |
| Msa1188600 | Msa1216720 | -0.800872 | 1.175700e-48 | -8.615850e-47 |
| Msa1193290 | Msa1216720 | 0.807920 | 3.993881e-50 | -8.615850e-47 |
| Msa1201560 | Msa1216720 | 0.806808 | 6.871470e-50 | -8.615850e-47 |
| Msa1202580 | Msa1216720 | 0.814511 | 1.484188e-51 | -8.615850e-47 |
| Msa1204530 | Msa1216720 | 0.808737 | 2.673749e-50 | -8.615850e-47 |
| Msa1204630 | Msa1216720 | 0.822196 | 2.696363e-53 | -8.615850e-47 |
| Msa1206310 | Msa1216720 | 0.810212 | 1.289482e-50 | -8.615850e-47 |
| Msa1206360 | Msa1216720 | 0.807825 | 4.182632e-50 | -8.615850e-47 |
| Msa1207310 | Msa1216720 | 0.801137 | 1.037432e-48 | -8.615850e-47 |
| Msa1208880 | Msa1216720 | 0.831231 | 1.876784e-55 | -8.615850e-47 |
| Msa1216720 | Msa1218450 | 0.807156 | 5.800266e-50 | -8.615850e-47 |
| Msa1216720 | Msa1236890 | 0.802914 | 4.473798e-49 | -8.615850e-47 |
| Msa1216720 | Msa1242580 | -0.805238 | 1.470321e-49 | -8.615850e-47 |
| Msa1216720 | Msa1245930 | 0.830032 | 3.689773e-55 | -8.615850e-47 |
| Msa1216720 | Msa1259060 | 0.824760 | 6.778594e-54 | -8.615850e-47 |
| Msa1216720 | Msa1262720 | 0.814920 | 1.205139e-51 | -8.615850e-47 |
| Msa1216720 | Msa1270660 | 0.803527 | 3.340645e-49 | -8.615850e-47 |
| Msa1216720 | Msa1278900 | 0.802458 | 5.557150e-49 | -8.615850e-47 |
| Msa1216720 | Msa1286610 | 0.816378 | 5.703018e-52 | -8.615850e-47 |
| Msa1216720 | Msa1294820 | 0.800323 | 1.520932e-48 | -8.615850e-47 |
| Msa1216720 | Msa1305190 | 0.806442 | 8.208623e-50 | -8.615850e-47 |
| Msa1216720 | Msa1305340 | 0.810404 | 1.172324e-50 | -8.615850e-47 |
| Msa1216720 | Msa1305710 | 0.808503 | 3.000276e-50 | -8.615850e-47 |
| Msa1216720 | Msa1306390 | 0.825108 | 5.610468e-54 | -8.615850e-47 |
| Msa1216720 | Msa1306840 | 0.823388 | 1.422915e-53 | -8.615850e-47 |
| Msa1216720 | Msa1331000 | 0.806116 | 9.616703e-50 | -8.615850e-47 |
| Msa1216720 | Msa1333420 | 0.803130 | 4.037769e-49 | -8.615850e-47 |
| Msa1216720 | Msa1335250 | 0.801713 | 7.906601e-49 | -8.615850e-47 |
| Msa1216720 | Msa1337480 | 0.818350 | 2.052254e-52 | -8.615850e-47 |
| Msa1216720 | Msa1342900 | 0.815614 | 8.445568e-52 | -8.615850e-47 |
| Msa1216720 | Msa1353980 | 0.818524 | 1.874248e-52 | -8.615850e-47 |
| Msa1216720 | Msa1357890 | 0.838732 | 2.414758e-57 | -8.615850e-47 |
| Msa1216720 | Msa1359560 | 0.804354 | 2.248592e-49 | -8.615850e-47 |
| Msa1216720 | Msa1360980 | 0.804249 | 2.365679e-49 | -8.615850e-47 |
| Msa1216720 | Msa1364210 | 0.835516 | 1.603624e-56 | -8.615850e-47 |
| Msa1216720 | Msa1376130 | 0.818700 | 1.709263e-52 | -8.615850e-47 |
| Msa1216720 | Msa1377570 | 0.818365 | 2.036134e-52 | -8.615850e-47 |
| Msa1216720 | Msa1389850 | 0.830340 | 3.103794e-55 | -8.615850e-47 |
| Msa1216720 | Msa1389880 | 0.833439 | 5.328438e-56 | -8.615850e-47 |
| Msa1216720 | Msa1398090 | 0.830027 | 3.700232e-55 | -8.615850e-47 |
| Msa1216720 | Msa1400580 | 0.835640 | 1.491666e-56 | -8.615850e-47 |
| Msa1216720 | Msa1407190 | 0.813439 | 2.558144e-51 | -8.615850e-47 |
| Msa1216720 | Msa1416370 | 0.800451 | 1.432414e-48 | -8.615850e-47 |
| Msa1216720 | Msa1417200 | 0.809832 | 1.556846e-50 | -8.615850e-47 |
| Msa1216720 | Msa1419870 | 0.811530 | 6.685239e-51 | -8.615850e-47 |
| Msa1216720 | Msa1423350 | 0.814129 | 1.802888e-51 | -8.615850e-47 |
| Msa1216720 | Msa1424450 | 0.820335 | 7.243257e-53 | -8.615850e-47 |
| Msa1216720 | Msa1425880 | 0.808689 | 2.737496e-50 | -8.615850e-47 |
| Msa1216720 | Msa1432130 | 0.805359 | 1.386986e-49 | -8.615850e-47 |
| Msa1216720 | Msa1433390 | 0.801130 | 1.041132e-48 | -8.615850e-47 |
| Msa1216720 | Msa1437210 | 0.805328 | 1.407627e-49 | -8.615850e-47 |
| Msa1216720 | Msa1443850 | 0.804212 | 2.407484e-49 | -8.615850e-47 |
| Msa1216720 | Msa1450720 | 0.806568 | 7.721238e-50 | -8.615850e-47 |
| Msa1216720 | Msa1457920 | 0.815834 | 7.545895e-52 | -8.615850e-47 |
| Msa1216720 | Msa1458610 | 0.802852 | 4.608238e-49 | -8.615850e-47 |
| Msa1216720 | Msa1461280 | 0.807490 | 4.926739e-50 | -8.615850e-47 |
| Msa1216720 | Msa1465850 | 0.817843 | 2.672366e-52 | -8.615850e-47 |
| Msa1216720 | Msa1466540 | 0.822084 | 2.862447e-53 | -8.615850e-47 |
| Msa0484780 | Msa1216720 | 0.822744 | 2.010431e-53 | -8.615850e-47 |
| Msa0485120 | Msa1216720 | 0.814496 | 1.496029e-51 | -8.615850e-47 |
| Msa0511490 | Msa1216720 | 0.821455 | 4.001428e-53 | -8.615850e-47 |
| Msa0512870 | Msa1216720 | 0.811255 | 7.671576e-51 | -8.615850e-47 |
| Msa0518380 | Msa1216720 | 0.811796 | 5.851167e-51 | -8.615850e-47 |
| Msa0518440 | Msa1216720 | 0.810420 | 1.162808e-50 | -8.615850e-47 |
| Msa0522070 | Msa1216720 | 0.825965 | 3.515579e-54 | -8.615850e-47 |
| Msa0529890 | Msa1216720 | 0.811757 | 5.966829e-51 | -8.615850e-47 |
| Msa0545060 | Msa1216720 | 0.812350 | 4.431504e-51 | -8.615850e-47 |
| Msa0560500 | Msa1216720 | 0.801900 | 7.239388e-49 | -8.615850e-47 |
| Msa0563840 | Msa1216720 | 0.804510 | 2.087205e-49 | -8.615850e-47 |
| Msa0565620 | Msa1216720 | -0.801982 | 6.964233e-49 | -8.615850e-47 |
| Msa0576680 | Msa1216720 | 0.805995 | 1.019714e-49 | -8.615850e-47 |
| Msa0577500 | Msa1216720 | 0.823057 | 1.700071e-53 | -8.615850e-47 |
| Msa0585560 | Msa1216720 | 0.820767 | 5.764419e-53 | -8.615850e-47 |
| Msa0598160 | Msa1216720 | 0.812047 | 5.159695e-51 | -8.615850e-47 |
| Msa0844230 | Msa1216720 | 0.803109 | 4.078676e-49 | -8.615850e-47 |
| Msa0863930 | Msa1216720 | 0.810312 | 1.227167e-50 | -8.615850e-47 |
| Msa0865570 | Msa1216720 | 0.811052 | 8.491216e-51 | -8.615850e-47 |
| Msa0876580 | Msa1216720 | 0.809360 | 1.966162e-50 | -8.615850e-47 |
| Msa0876810 | Msa1216720 | 0.801121 | 1.045279e-48 | -8.615850e-47 |
| Msa0878510 | Msa1216720 | 0.811790 | 5.869671e-51 | -8.615850e-47 |
| Msa0880040 | Msa1216720 | 0.837718 | 4.404506e-57 | -8.615850e-47 |
| Msa0890550 | Msa1216720 | 0.818815 | 1.609326e-52 | -8.615850e-47 |
| Msa0899350 | Msa1216720 | 0.801960 | 7.037106e-49 | -8.615850e-47 |
| Msa0900620 | Msa1216720 | 0.801607 | 8.311945e-49 | -8.615850e-47 |
| Msa0902760 | Msa1216720 | 0.801614 | 8.284772e-49 | -8.615850e-47 |
| Msa0918390 | Msa1216720 | 0.817472 | 3.239981e-52 | -8.615850e-47 |
| Msa0930140 | Msa1216720 | 0.821961 | 3.055653e-53 | -8.615850e-47 |
| Msa0942560 | Msa1216720 | -0.811348 | 7.323996e-51 | -8.615850e-47 |
| Msa0962840 | Msa1216720 | 0.819286 | 1.257696e-52 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1216720 | MtrunA17_Chr4g0066451 | 98.165 | 218 | 4 | 0 | 1 | 218 | 1 | 218 | 5.60e-160 | 441 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1216720 | AT4G15520.1 | 75.229 | 218 | 51 | 2 | 3 | 217 | 4 | 221 | 4.29e-120 | 340 |
Find 57 sgRNAs with CRISPR-Local
Find 167 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCTATTGTTCTTCATCAATT+TGG | 0.169699 | 8_1:+78664988 | Msa1216720:CDS |
| TGAAGATTTCTACTCTTATT+AGG | 0.212920 | 8_1:+78666999 | Msa1216720:three_prime_UTR |
| CTTTATGCATTATTTGTTGA+TGG | 0.272931 | 8_1:+78666829 | Msa1216720:CDS |
| TGCCATTTGCTCTACTGATA+TGG | 0.282344 | 8_1:+78667137 | Msa1216720:three_prime_UTR |
| CAATTGACGGACTGTAGTTT+AGG | 0.283288 | 8_1:+78666871 | Msa1216720:three_prime_UTR |
| TTAAAAGGATGTTGATTAAC+AGG | 0.283978 | 8_1:-78664832 | None:intergenic |
| TTTGTTTATATTCCGCAATA+TGG | 0.296529 | 8_1:+78664928 | Msa1216720:CDS |
| CGAAGAGATTTCAACAGTTT+CGG | 0.342769 | 8_1:+78664688 | Msa1216720:CDS |
| AATTGACGGACTGTAGTTTA+GGG | 0.348699 | 8_1:+78666872 | Msa1216720:three_prime_UTR |
| TTGCTTGGTAATGAAGGTTC+TGG | 0.350744 | 8_1:+78664871 | Msa1216720:CDS |
| AAAAGTACTGCTTTCTTGCT+TGG | 0.361273 | 8_1:+78664856 | Msa1216720:CDS |
| CATTATTTGTTGATGGTTGA+TGG | 0.368774 | 8_1:+78666836 | Msa1216720:CDS |
| TAGAAGAGAACCGACATCTT+AGG | 0.393257 | 8_1:+78666915 | Msa1216720:three_prime_UTR |
| ATTGGCGGCATTCTCTCTTC+TGG | 0.397261 | 8_1:-78666761 | None:intergenic |
| CTTAGGTATCTAATGTGGTT+TGG | 0.397267 | 8_1:+78666932 | Msa1216720:three_prime_UTR |
| CAGAGTTGATACTAACAAAA+TGG | 0.406161 | 8_1:+78664558 | Msa1216720:exon |
| GCACGAAGCGCAACAGCATT+CGG | 0.421833 | 8_1:+78664640 | Msa1216720:CDS |
| GCTTTCTTGCTTGGTAATGA+AGG | 0.426363 | 8_1:+78664865 | Msa1216720:CDS |
| AACCATATCAGTAGAGCAAA+TGG | 0.443015 | 8_1:-78667139 | None:intergenic |
| TTGTTTATATTCCGCAATAT+GGG | 0.446663 | 8_1:+78664929 | Msa1216720:CDS |
| ATTGTTCTTCATCAATTTGG+AGG | 0.453062 | 8_1:+78664991 | Msa1216720:CDS |
| CATCAACAAATAATGCATAA+AGG | 0.457625 | 8_1:-78666828 | None:intergenic |
| ATTTATACAGAGGCATTAGC+TGG | 0.464610 | 8_1:+78666975 | Msa1216720:three_prime_UTR |
| TCGACCAACGAGGATTAGTT+CGG | 0.466321 | 8_1:-78664668 | None:intergenic |
| GACAAAGATTGTGACATTTG+CGG | 0.478875 | 8_1:+78664784 | Msa1216720:CDS |
| TATTTGTTGCAGAGAGAAAA+CGG | 0.487646 | 8_1:-78664503 | None:intergenic |
| AACGGCTACCGCGTTGCGAA+AGG | 0.488982 | 8_1:-78664485 | None:intergenic |
| GGCTCTACGCTCTTCGATGA+CGG | 0.492169 | 8_1:-78666740 | None:intergenic |
| AGCTTCTTCAAAGAAACCAT+TGG | 0.515730 | 8_1:-78666779 | None:intergenic |
| GCAAATGGCAGTGTTATAGT+TGG | 0.515834 | 8_1:-78667124 | None:intergenic |
| ACGGCTACCGCGTTGCGAAA+GGG | 0.516203 | 8_1:-78664484 | None:intergenic |
| TTTCGTCGACCATGTTTCAC+AGG | 0.524298 | 8_1:-78666694 | None:intergenic |
| TATATTCCGCAATATGGGTG+TGG | 0.552488 | 8_1:+78664934 | Msa1216720:CDS |
| TTCTTCAAAGAAACCATTGG+CGG | 0.556928 | 8_1:-78666776 | None:intergenic |
| GACAAAGCAACTTGCACGGA+AGG | 0.558423 | 8_1:-78664534 | None:intergenic |
| TTCAACAGTTTCGGTAACCA+TGG | 0.567269 | 8_1:+78664697 | Msa1216720:CDS |
| GAAGATGTGTGATCAATTGA+CGG | 0.583869 | 8_1:+78666858 | Msa1216720:three_prime_UTR |
| GGGCTTAAATGCTTTAGTTG+CGG | 0.586711 | 8_1:+78666892 | Msa1216720:three_prime_UTR |
| CAATAACTGTCACTAATGAC+AGG | 0.587673 | 8_1:+78667051 | Msa1216720:three_prime_UTR |
| ACATTAGATACCTAAGATGT+CGG | 0.596555 | 8_1:-78666925 | None:intergenic |
| AGAAGAGAGAATGCCGCCAA+TGG | 0.603778 | 8_1:+78666763 | Msa1216720:CDS |
| TTGTACACAACATAGCAAAA+CGG | 0.606644 | 8_1:+78664599 | Msa1216720:CDS |
| GCAGAGAGACCTGTGAAACA+TGG | 0.616817 | 8_1:+78666685 | Msa1216720:CDS |
| CTGCGACAAAGCAACTTGCA+CGG | 0.621535 | 8_1:-78664538 | None:intergenic |
| GTATCCGAACTAATCCTCGT+TGG | 0.630687 | 8_1:+78664664 | Msa1216720:CDS |
| GAAGGTGGTTTGAAGAACCA+TGG | 0.643878 | 8_1:-78664714 | None:intergenic |
| GACATCTTAGGTATCTAATG+TGG | 0.644904 | 8_1:+78666927 | Msa1216720:three_prime_UTR |
| TTATTACATAATTTATACAG+AGG | 0.645843 | 8_1:+78666965 | Msa1216720:three_prime_UTR |
| CAACAAATAATGCATAAAGG+AGG | 0.663718 | 8_1:-78666825 | None:intergenic |
| GAAAGTGACGAAATCGAAGG+TGG | 0.672321 | 8_1:-78664729 | None:intergenic |
| TGAAATCTCTTCGACCAACG+AGG | 0.674642 | 8_1:-78664678 | None:intergenic |
| CTGAGAGCCCTTTCGCAACG+CGG | 0.676140 | 8_1:+78664477 | Msa1216720:five_prime_UTR |
| AGTGAAAGTGACGAAATCGA+AGG | 0.683890 | 8_1:-78664732 | None:intergenic |
| TGGTCGACGAAATTACTGCA+CGG | 0.684868 | 8_1:+78666705 | Msa1216720:CDS |
| TTTGCTGAGAGATCTCGTGA+TGG | 0.690113 | 8_1:+78666646 | Msa1216720:CDS |
| GCAGTACCACACCCATATTG+CGG | 0.695525 | 8_1:-78664940 | None:intergenic |
| ATAGCAAAACGGCACAACGT+AGG | 0.696815 | 8_1:+78664610 | Msa1216720:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AATAAATATGCATATTTTTT+TGG | - | chr8_1:78665921-78665940 | None:intergenic | 10.0% |
| !!! | ATCATATTTCTACATTTTTT+TGG | + | chr8_1:78666434-78666453 | Msa1216720:intron | 15.0% |
| !! | TTATTACATAATTTATACAG+AGG | + | chr8_1:78666965-78666984 | Msa1216720:three_prime_UTR | 15.0% |
| !!! | ATGATAGTTTACATGTTTTA+GGG | + | chr8_1:78665041-78665060 | Msa1216720:intron | 20.0% |
| !! | ATTATGTAAATGTGAGTTTA+AGG | + | chr8_1:78665149-78665168 | Msa1216720:intron | 20.0% |
| !! | TTATGTAAATGTGAGTTTAA+GGG | + | chr8_1:78665150-78665169 | Msa1216720:intron | 20.0% |
| !!! | TCTAAAATTAATTAGAACAC+AGG | - | chr8_1:78665273-78665292 | None:intergenic | 20.0% |
| !!! | GAAATTGATTTTGGTATATT+TGG | - | chr8_1:78665321-78665340 | None:intergenic | 20.0% |
| !! | GGAAATGTTATTGATATATT+GGG | - | chr8_1:78665594-78665613 | None:intergenic | 20.0% |
| !! | AGGAAATGTTATTGATATAT+TGG | - | chr8_1:78665595-78665614 | None:intergenic | 20.0% |
| !!! | TCAATAACATTTCCTTTTTA+CGG | + | chr8_1:78665600-78665619 | Msa1216720:intron | 20.0% |
| !! | TCAATTGTATGTAAGAAAAA+AGG | - | chr8_1:78665785-78665804 | None:intergenic | 20.0% |
| !!! | TTTTTTGGAAGTACTATAAT+AGG | - | chr8_1:78665906-78665925 | None:intergenic | 20.0% |
| !!! | AAGTTTTTAACTAAAAGAAC+TGG | - | chr8_1:78666005-78666024 | None:intergenic | 20.0% |
| !!! | CTTTTAGTTAAAAACTTTGA+TGG | + | chr8_1:78666008-78666027 | Msa1216720:intron | 20.0% |
| !!! | TGTTTATGTTCTCATTTTTT+TGG | + | chr8_1:78666392-78666411 | Msa1216720:intron | 20.0% |
| !! | AACAAAATCAATATACAGTT+GGG | - | chr8_1:78666470-78666489 | None:intergenic | 20.0% |
| !! | TTAAAAGGATGTTGATTAAC+AGG | - | chr8_1:78664835-78664854 | None:intergenic | 25.0% |
| !! | AAAGCAGTACTTTTCTTAAA+AGG | - | chr8_1:78664850-78664869 | None:intergenic | 25.0% |
| ! | TTTGTTTATATTCCGCAATA+TGG | + | chr8_1:78664928-78664947 | Msa1216720:CDS | 25.0% |
| ! | TTGTTTATATTCCGCAATAT+GGG | + | chr8_1:78664929-78664948 | Msa1216720:CDS | 25.0% |
| ! | TCTATTGTTCTTCATCAATT+TGG | + | chr8_1:78664988-78665007 | Msa1216720:CDS | 25.0% |
| !! | GATGATAGTTTACATGTTTT+AGG | + | chr8_1:78665040-78665059 | Msa1216720:intron | 25.0% |
| !! | TCTGTGATGATATTTTATGT+AGG | + | chr8_1:78665086-78665105 | Msa1216720:intron | 25.0% |
| ! | ATTTATGTCTGGATATGTAT+AGG | + | chr8_1:78665179-78665198 | Msa1216720:intron | 25.0% |
| !!! | TGATGACTTGAAATTGATTT+TGG | - | chr8_1:78665330-78665349 | None:intergenic | 25.0% |
| !! | CTGAAAAGGTATATAAACAT+GGG | - | chr8_1:78665485-78665504 | None:intergenic | 25.0% |
| !! | ACTGAAAAGGTATATAAACA+TGG | - | chr8_1:78665486-78665505 | None:intergenic | 25.0% |
| !! | CAATAACATTTCCTTTTTAC+GGG | + | chr8_1:78665601-78665620 | Msa1216720:intron | 25.0% |
| ! | TTAGTTAAAAACTTTGATGG+TGG | + | chr8_1:78666011-78666030 | Msa1216720:intron | 25.0% |
| !! | TGATTAAATGTCTGTTTCTT+TGG | + | chr8_1:78666210-78666229 | Msa1216720:intron | 25.0% |
| !!! | AACGTAAATTAGTTTGTTAC+TGG | + | chr8_1:78666303-78666322 | Msa1216720:intron | 25.0% |
| ! | ATGAGAACATAAACAACAAA+GGG | - | chr8_1:78666387-78666406 | None:intergenic | 25.0% |
| ! | AATGAGAACATAAACAACAA+AGG | - | chr8_1:78666388-78666407 | None:intergenic | 25.0% |
| ! | CAACAAAATCAATATACAGT+TGG | - | chr8_1:78666471-78666490 | None:intergenic | 25.0% |
| ! | TTAAGTAAAAAGATGCAGTT+GGG | - | chr8_1:78666526-78666545 | None:intergenic | 25.0% |
| ! | ATTAAGTAAAAAGATGCAGT+TGG | - | chr8_1:78666527-78666546 | None:intergenic | 25.0% |
| ! | AACCAATATCATAATGAATG+AGG | - | chr8_1:78666553-78666572 | None:intergenic | 25.0% |
| ! | CATCAACAAATAATGCATAA+AGG | - | chr8_1:78666831-78666850 | None:intergenic | 25.0% |
| !! | CTTTATGCATTATTTGTTGA+TGG | + | chr8_1:78666829-78666848 | Msa1216720:CDS | 25.0% |
| ! | TGAAGATTTCTACTCTTATT+AGG | + | chr8_1:78666999-78667018 | Msa1216720:three_prime_UTR | 25.0% |
| ! | TATTTGTTGCAGAGAGAAAA+CGG | - | chr8_1:78664506-78664525 | None:intergenic | 30.0% |
| !! | CAGAGTTGATACTAACAAAA+TGG | + | chr8_1:78664558-78664577 | Msa1216720:exon | 30.0% |
| TTGTACACAACATAGCAAAA+CGG | + | chr8_1:78664599-78664618 | Msa1216720:CDS | 30.0% | |
| ATTGTTCTTCATCAATTTGG+AGG | + | chr8_1:78664991-78665010 | Msa1216720:CDS | 30.0% | |
| AAGGGAAAATGATTTATGTC+TGG | + | chr8_1:78665168-78665187 | Msa1216720:intron | 30.0% | |
| CAAAAATCTAAGTGCAAGTT+CGG | - | chr8_1:78665383-78665402 | None:intergenic | 30.0% | |
| ! | GAACTTGCACTTAGATTTTT+GGG | + | chr8_1:78665382-78665401 | Msa1216720:intron | 30.0% |
| TAACATTCAACTACCAACTT+GGG | + | chr8_1:78665450-78665469 | Msa1216720:intron | 30.0% | |
| AGGATTCATGAAAACTGAAA+AGG | - | chr8_1:78665499-78665518 | None:intergenic | 30.0% | |
| !! | ATCAGTTGGTGAAGAAAATA+GGG | + | chr8_1:78665536-78665555 | Msa1216720:intron | 30.0% |
| !! | AGTGTTGCTTCTTAATATTG+AGG | + | chr8_1:78665626-78665645 | Msa1216720:intron | 30.0% |
| !! | GTGTTGCTTCTTAATATTGA+GGG | + | chr8_1:78665627-78665646 | Msa1216720:intron | 30.0% |
| ! | CTTAATATTGAGGGACATTT+TGG | + | chr8_1:78665636-78665655 | Msa1216720:intron | 30.0% |
| TTAATCACAAGAAGACAACT+CGG | - | chr8_1:78666197-78666216 | None:intergenic | 30.0% | |
| CACCTCATTCATTATGATAT+TGG | + | chr8_1:78666548-78666567 | Msa1216720:intron | 30.0% | |
| CAACAAATAATGCATAAAGG+AGG | - | chr8_1:78666828-78666847 | None:intergenic | 30.0% | |
| !! | CATTATTTGTTGATGGTTGA+TGG | + | chr8_1:78666836-78666855 | Msa1216720:CDS | 30.0% |
| ACATTAGATACCTAAGATGT+CGG | - | chr8_1:78666928-78666947 | None:intergenic | 30.0% | |
| CGAAGAGATTTCAACAGTTT+CGG | + | chr8_1:78664688-78664707 | Msa1216720:CDS | 35.0% | |
| GACAAAGATTGTGACATTTG+CGG | + | chr8_1:78664784-78664803 | Msa1216720:CDS | 35.0% | |
| !! | AAAAGTACTGCTTTCTTGCT+TGG | + | chr8_1:78664856-78664875 | Msa1216720:CDS | 35.0% |
| TGGATATGTATAGGTGAAAG+TGG | + | chr8_1:78665188-78665207 | Msa1216720:intron | 35.0% | |
| GGATATGTATAGGTGAAAGT+GGG | + | chr8_1:78665189-78665208 | Msa1216720:intron | 35.0% | |
| ! | CAAGTCATCAGAATCACTTT+TGG | + | chr8_1:78665340-78665359 | Msa1216720:intron | 35.0% |
| ! | CGAACTTGCACTTAGATTTT+TGG | + | chr8_1:78665381-78665400 | Msa1216720:intron | 35.0% |
| ! | TTGGGAGACTAGATTCATTT+TGG | + | chr8_1:78665400-78665419 | Msa1216720:intron | 35.0% |
| ! | TGGGAGACTAGATTCATTTT+GGG | + | chr8_1:78665401-78665420 | Msa1216720:intron | 35.0% |
| !! | TAGATTCATTTTGGGAGGAT+TGG | + | chr8_1:78665409-78665428 | Msa1216720:intron | 35.0% |
| CTAACATTCAACTACCAACT+TGG | + | chr8_1:78665449-78665468 | Msa1216720:intron | 35.0% | |
| GATCTCACAAGGAAAACTTA+AGG | - | chr8_1:78665519-78665538 | None:intergenic | 35.0% | |
| !! | GATCAGTTGGTGAAGAAAAT+AGG | + | chr8_1:78665535-78665554 | Msa1216720:intron | 35.0% |
| GACTTATTTCAACTGCTTTG+CGG | + | chr8_1:78665803-78665822 | Msa1216720:intron | 35.0% | |
| !! | TATGCTACATGACGGATATT+TGG | + | chr8_1:78665851-78665870 | Msa1216720:intron | 35.0% |
| AACTAAAAGAACTGGCTACA+AGG | - | chr8_1:78665997-78666016 | None:intergenic | 35.0% | |
| !!! | GTTTTTGAGTTCTCTTAGTC+TGG | + | chr8_1:78666064-78666083 | Msa1216720:intron | 35.0% |
| CAGTAGTCATATCACTTACA+AGG | - | chr8_1:78666335-78666354 | None:intergenic | 35.0% | |
| AAGTGATATGACTACTGTAG+TGG | + | chr8_1:78666338-78666357 | Msa1216720:intron | 35.0% | |
| TCAATATACAGTTGGGAATG+AGG | - | chr8_1:78666463-78666482 | None:intergenic | 35.0% | |
| !!! | TTCTGATGCGTTCCTTTTTT+TGG | + | chr8_1:78666608-78666627 | Msa1216720:intron | 35.0% |
| !!! | TTCCTTTTTTTGGTCAGTCT+GGG | + | chr8_1:78666618-78666637 | Msa1216720:intron | 35.0% |
| TTCTTCAAAGAAACCATTGG+CGG | - | chr8_1:78666779-78666798 | None:intergenic | 35.0% | |
| AGCTTCTTCAAAGAAACCAT+TGG | - | chr8_1:78666782-78666801 | None:intergenic | 35.0% | |
| GAAGATGTGTGATCAATTGA+CGG | + | chr8_1:78666858-78666877 | Msa1216720:three_prime_UTR | 35.0% | |
| !! | AATTGACGGACTGTAGTTTA+GGG | + | chr8_1:78666872-78666891 | Msa1216720:three_prime_UTR | 35.0% |
| GACATCTTAGGTATCTAATG+TGG | + | chr8_1:78666927-78666946 | Msa1216720:three_prime_UTR | 35.0% | |
| CTTAGGTATCTAATGTGGTT+TGG | + | chr8_1:78666932-78666951 | Msa1216720:three_prime_UTR | 35.0% | |
| !! | ATTTATACAGAGGCATTAGC+TGG | + | chr8_1:78666975-78666994 | Msa1216720:three_prime_UTR | 35.0% |
| CAATAACTGTCACTAATGAC+AGG | + | chr8_1:78667051-78667070 | Msa1216720:three_prime_UTR | 35.0% | |
| AACCATATCAGTAGAGCAAA+TGG | - | chr8_1:78667142-78667161 | None:intergenic | 35.0% | |
| TTCAACAGTTTCGGTAACCA+TGG | + | chr8_1:78664697-78664716 | Msa1216720:CDS | 40.0% | |
| AGTGAAAGTGACGAAATCGA+AGG | - | chr8_1:78664735-78664754 | None:intergenic | 40.0% | |
| !! | GCTTTCTTGCTTGGTAATGA+AGG | + | chr8_1:78664865-78664884 | Msa1216720:CDS | 40.0% |
| !! | TTGCTTGGTAATGAAGGTTC+TGG | + | chr8_1:78664871-78664890 | Msa1216720:CDS | 40.0% |
| TATATTCCGCAATATGGGTG+TGG | + | chr8_1:78664934-78664953 | Msa1216720:CDS | 40.0% | |
| !! | GCAAGTTCGGATTCACTTTT+CGG | - | chr8_1:78665370-78665389 | None:intergenic | 40.0% |
| ! | GAGACTAGATTCATTTTGGG+AGG | + | chr8_1:78665404-78665423 | Msa1216720:intron | 40.0% |
| ! | GTTTTCCTTGTGAGATCAGT+TGG | + | chr8_1:78665522-78665541 | Msa1216720:intron | 40.0% |
| TGAAGAAAATAGGGAGTTGC+TGG | + | chr8_1:78665545-78665564 | Msa1216720:intron | 40.0% | |
| !! | TATTGAGGGACATTTTGGTG+TGG | + | chr8_1:78665641-78665660 | Msa1216720:intron | 40.0% |
| !! | ATTGAGGGACATTTTGGTGT+GGG | + | chr8_1:78665642-78665661 | Msa1216720:intron | 40.0% |
| TTGGTGTGGGATTGAATATG+AGG | + | chr8_1:78665655-78665674 | Msa1216720:intron | 40.0% | |
| ATGAGGTGAAAAGTTCATCG+AGG | + | chr8_1:78665672-78665691 | Msa1216720:intron | 40.0% | |
| TGAGGTGAAAAGTTCATCGA+GGG | + | chr8_1:78665673-78665692 | Msa1216720:intron | 40.0% | |
| ! | TTCATCGAGGGACATTTTGT+CGG | + | chr8_1:78665685-78665704 | Msa1216720:intron | 40.0% |
| AGCGGAAAAGAGAGAATTTC+TGG | + | chr8_1:78665715-78665734 | Msa1216720:intron | 40.0% | |
| GCGGAAAAGAGAGAATTTCT+GGG | + | chr8_1:78665716-78665735 | Msa1216720:intron | 40.0% | |
| ! | CATGTAGCATACAGTGTTGA+AGG | - | chr8_1:78665842-78665861 | None:intergenic | 40.0% |
| CAACACTGTATGCTACATGA+CGG | + | chr8_1:78665843-78665862 | Msa1216720:intron | 40.0% | |
| TTCTCTTAGTCTGGTTGAAG+TGG | + | chr8_1:78666073-78666092 | Msa1216720:intron | 40.0% | |
| TGTGATGAAAATGTCCCGAT+GGG | + | chr8_1:78666127-78666146 | Msa1216720:intron | 40.0% | |
| TAATGACAAGGTTTGGGGAA+GGG | - | chr8_1:78666158-78666177 | None:intergenic | 40.0% | |
| ATAATGACAAGGTTTGGGGA+AGG | - | chr8_1:78666159-78666178 | None:intergenic | 40.0% | |
| TTCCCCAAACCTTGTCATTA+TGG | + | chr8_1:78666158-78666177 | Msa1216720:intron | 40.0% | |
| TCCCCAAACCTTGTCATTAT+GGG | + | chr8_1:78666159-78666178 | Msa1216720:intron | 40.0% | |
| ACAAAACCCCCATAATGACA+AGG | - | chr8_1:78666170-78666189 | None:intergenic | 40.0% | |
| ! | CTGTAGTGGTACATCCTTTT+TGG | + | chr8_1:78666352-78666371 | Msa1216720:intron | 40.0% |
| ! | TGGTACATCCTTTTTGGATC+TGG | + | chr8_1:78666358-78666377 | Msa1216720:intron | 40.0% |
| ! | GGTACATCCTTTTTGGATCT+GGG | + | chr8_1:78666359-78666378 | Msa1216720:intron | 40.0% |
| !!! | GTTCCTTTTTTTGGTCAGTC+TGG | + | chr8_1:78666617-78666636 | Msa1216720:intron | 40.0% |
| !! | CAATTGACGGACTGTAGTTT+AGG | + | chr8_1:78666871-78666890 | Msa1216720:three_prime_UTR | 40.0% |
| GGGCTTAAATGCTTTAGTTG+CGG | + | chr8_1:78666892-78666911 | Msa1216720:three_prime_UTR | 40.0% | |
| TAGAAGAGAACCGACATCTT+AGG | + | chr8_1:78666915-78666934 | Msa1216720:three_prime_UTR | 40.0% | |
| GCAAATGGCAGTGTTATAGT+TGG | - | chr8_1:78667127-78667146 | None:intergenic | 40.0% | |
| ! | TGCCATTTGCTCTACTGATA+TGG | + | chr8_1:78667137-78667156 | Msa1216720:three_prime_UTR | 40.0% |
| ATAGCAAAACGGCACAACGT+AGG | + | chr8_1:78664610-78664629 | Msa1216720:CDS | 45.0% | |
| GTATCCGAACTAATCCTCGT+TGG | + | chr8_1:78664664-78664683 | Msa1216720:CDS | 45.0% | |
| !! | TCGACCAACGAGGATTAGTT+CGG | - | chr8_1:78664671-78664690 | None:intergenic | 45.0% |
| TGAAATCTCTTCGACCAACG+AGG | - | chr8_1:78664681-78664700 | None:intergenic | 45.0% | |
| GAAGGTGGTTTGAAGAACCA+TGG | - | chr8_1:78664717-78664736 | None:intergenic | 45.0% | |
| GAAAGTGACGAAATCGAAGG+TGG | - | chr8_1:78664732-78664751 | None:intergenic | 45.0% | |
| !! | TCATTTTGGGAGGATTGGTG+TGG | + | chr8_1:78665414-78665433 | Msa1216720:intron | 45.0% |
| CATTCAACTACCAACTTGGG+AGG | + | chr8_1:78665453-78665472 | Msa1216720:intron | 45.0% | |
| TGGGATAAATCCTCCCAAGT+TGG | - | chr8_1:78665466-78665485 | None:intergenic | 45.0% | |
| CTTCACCAACTGATCTCACA+AGG | - | chr8_1:78665530-78665549 | None:intergenic | 45.0% | |
| AGCAACACTCACCCGTAAAA+AGG | - | chr8_1:78665615-78665634 | None:intergenic | 45.0% | |
| ! | CATTTTGTCGGTGGATGTAG+CGG | + | chr8_1:78665697-78665716 | Msa1216720:intron | 45.0% |
| ! | ACAGTGTTGAAGGCAAACAG+CGG | - | chr8_1:78665832-78665851 | None:intergenic | 45.0% |
| GTGTGATGAAAATGTCCCGA+TGG | + | chr8_1:78666126-78666145 | Msa1216720:intron | 45.0% | |
| CCCCATAATGACAAGGTTTG+GGG | - | chr8_1:78666163-78666182 | None:intergenic | 45.0% | |
| CCCCAAACCTTGTCATTATG+GGG | + | chr8_1:78666160-78666179 | Msa1216720:intron | 45.0% | |
| CCCCCATAATGACAAGGTTT+GGG | - | chr8_1:78666164-78666183 | None:intergenic | 45.0% | |
| CCCAAACCTTGTCATTATGG+GGG | + | chr8_1:78666161-78666180 | Msa1216720:intron | 45.0% | |
| ACCCCCATAATGACAAGGTT+TGG | - | chr8_1:78666165-78666184 | None:intergenic | 45.0% | |
| GCAGCATGCAAACTGGAATT+AGG | - | chr8_1:78666259-78666278 | None:intergenic | 45.0% | |
| ATTCCAGTTTGCATGCTGCT+TGG | + | chr8_1:78666260-78666279 | Msa1216720:intron | 45.0% | |
| AAGGGAACCCAGATCCAAAA+AGG | - | chr8_1:78666369-78666388 | None:intergenic | 45.0% | |
| TGCCCAGACTGACCAAAAAA+AGG | - | chr8_1:78666623-78666642 | None:intergenic | 45.0% | |
| !!! | TTTTTTTGGTCAGTCTGGGC+AGG | + | chr8_1:78666622-78666641 | Msa1216720:intron | 45.0% |
| TTTGCTGAGAGATCTCGTGA+TGG | + | chr8_1:78666646-78666665 | Msa1216720:CDS | 45.0% | |
| TTTCGTCGACCATGTTTCAC+AGG | - | chr8_1:78666697-78666716 | None:intergenic | 45.0% | |
| TGGTCGACGAAATTACTGCA+CGG | + | chr8_1:78666705-78666724 | Msa1216720:CDS | 45.0% | |
| GACAAAGCAACTTGCACGGA+AGG | - | chr8_1:78664537-78664556 | None:intergenic | 50.0% | |
| CTGCGACAAAGCAACTTGCA+CGG | - | chr8_1:78664541-78664560 | None:intergenic | 50.0% | |
| GCAGTACCACACCCATATTG+CGG | - | chr8_1:78664943-78664962 | None:intergenic | 50.0% | |
| ! | ATCGAGGGACATTTTGTCGG+TGG | + | chr8_1:78665688-78665707 | Msa1216720:intron | 50.0% |
| CATCCAAGCAGCATGCAAAC+TGG | - | chr8_1:78666266-78666285 | None:intergenic | 50.0% | |
| GCAGAGAGACCTGTGAAACA+TGG | + | chr8_1:78666685-78666704 | Msa1216720:CDS | 50.0% | |
| ATTGGCGGCATTCTCTCTTC+TGG | - | chr8_1:78666764-78666783 | None:intergenic | 50.0% | |
| AGAAGAGAGAATGCCGCCAA+TGG | + | chr8_1:78666763-78666782 | Msa1216720:CDS | 50.0% | |
| GCACGAAGCGCAACAGCATT+CGG | + | chr8_1:78664640-78664659 | Msa1216720:CDS | 55.0% | |
| GGCTCTACGCTCTTCGATGA+CGG | - | chr8_1:78666743-78666762 | None:intergenic | 55.0% | |
| CTGAGAGCCCTTTCGCAACG+CGG | + | chr8_1:78664477-78664496 | Msa1216720:five_prime_UTR | 60.0% | |
| ACGGCTACCGCGTTGCGAAA+GGG | - | chr8_1:78664487-78664506 | None:intergenic | 60.0% | |
| AACGGCTACCGCGTTGCGAA+AGG | - | chr8_1:78664488-78664507 | None:intergenic | 60.0% | |
| TGGGGAAGGGTCAAGCCCAT+CGG | - | chr8_1:78666145-78666164 | None:intergenic | 60.0% | |
| GGGGAAGGGTCAAGCCCATC+GGG | - | chr8_1:78666144-78666163 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_1 | gene | 78664471 | 78667168 | 78664471 | ID=Msa1216720;Name=Msa1216720 |
| chr8_1 | mRNA | 78664471 | 78667168 | 78664471 | ID=Msa1216720-mRNA-1;Parent=Msa1216720;Name=Msa1216720-mRNA-1;_AED=0.01;_eAED=0.01;_QI=106|1|1|1|1|1|2|313|218 |
| chr8_1 | exon | 78664471 | 78665012 | 78664471 | ID=Msa1216720-mRNA-1:exon:27189;Parent=Msa1216720-mRNA-1 |
| chr8_1 | exon | 78666635 | 78667168 | 78666635 | ID=Msa1216720-mRNA-1:exon:27190;Parent=Msa1216720-mRNA-1 |
| chr8_1 | five_prime_UTR | 78664471 | 78664576 | 78664471 | ID=Msa1216720-mRNA-1:five_prime_utr;Parent=Msa1216720-mRNA-1 |
| chr8_1 | CDS | 78664577 | 78665012 | 78664577 | ID=Msa1216720-mRNA-1:cds;Parent=Msa1216720-mRNA-1 |
| chr8_1 | CDS | 78666635 | 78666855 | 78666635 | ID=Msa1216720-mRNA-1:cds;Parent=Msa1216720-mRNA-1 |
| chr8_1 | three_prime_UTR | 78666856 | 78667168 | 78666856 | ID=Msa1216720-mRNA-1:three_prime_utr;Parent=Msa1216720-mRNA-1 |
| Gene Sequence |
| Protein sequence |
