AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1088690


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1088690 MtrunA17_Chr8g0358961 95.595 227 10 0 1 227 1 227 1.37e-166 458
Msa1088690 MtrunA17_Chr4g0058821 41.667 180 96 4 39 215 23 196 1.72e-33 120
Msa1088690 MtrunA17_Chr8g0368391 35.577 208 120 5 13 215 5 203 2.51e-32 117
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1088690 AT1G17100.1 62.632 190 68 1 35 221 42 231 1.41e-89 264
Msa1088690 AT1G78450.1 48.214 224 103 4 4 222 1 216 9.75e-71 216
Msa1088690 AT1G78460.1 45.455 187 94 3 35 220 40 219 9.96e-51 164

Find 116 sgRNAs with CRISPR-Local

Find 817 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGGCCAAAACTTTGCCTTAT+TGG 0.137774 7_3:-2068497 Msa1088710:CDS
ATTCCTCCAGAGAACCTTTC+TGG 0.180535 7_3:+2068583 Msa1088690:three_prime_UTR
CAGAATGGTAAATTGATAAA+AGG 0.212029 7_3:-2056454 None:intergenic
TCAAAAGTTGATATATTTAT+AGG 0.215933 7_3:-2068847 Msa1088710:intron
CTTATCTCAATTTCATTATC+AGG 0.236313 7_3:+2056560 Msa1088690:CDS
TTCTTGTTTGATTTGGAAAA+TGG 0.250380 7_3:+2058134 Msa1088690:CDS
TACTACTTTGGCTTCCAATA+AGG 0.270800 7_3:+2068483 Msa1088690:three_prime_UTR
GACGTTATAATTCGTCTGTT+TGG 0.282437 7_3:+2056669 Msa1088690:CDS
CGGATCTTAGCCCCGTGTTT+TGG 0.297729 7_3:+2068379 Msa1088690:three_prime_UTR
AAGCTACTAGAACTGGTTTC+CGG 0.298026 7_3:+2056729 Msa1088690:CDS
TAGGCTATTTGATTACATTC+AGG 0.303343 7_3:+2057734 Msa1088690:intron
TAATTCAGTAATAAGTGTTT+TGG 0.305738 7_3:+2058372 Msa1088690:three_prime_UTR
GGATTTGCTTGGTTCACTTT+TGG 0.319811 7_3:-2057867 None:intergenic
TTCACCATGACTGTGATATA+TGG 0.320687 7_3:-2068630 Msa1088710:CDS
GATATGGTTCTTGTTTGATT+TGG 0.325272 7_3:+2058127 Msa1088690:CDS
TGTTTCCATACCGATACTTT+TGG 0.342478 7_3:-2068653 Msa1088710:CDS
TGAACATGAAGACCCTTTGC+AGG 0.347285 7_3:-2057894 None:intergenic
AATGTCTTGAATAGGAGAAT+TGG 0.347748 7_3:-2056696 None:intergenic
ATTCAAAAGGGGCATTGTAC+TGG 0.369508 7_3:-2058085 None:intergenic
AACTTACATAACATACTATC+TGG 0.380641 7_3:-2058204 None:intergenic
CTTGTTGAAGCTACTAGAAC+TGG 0.386778 7_3:+2056722 Msa1088690:CDS
ACAAATGAAGACTCACAAAA+TGG 0.387846 7_3:-2057828 None:intergenic
TTATTCCTGCAGGTAGTGAT+AGG 0.388666 7_3:+2068677 Msa1088690:three_prime_UTR
AGCTTCTATGACATCATAGT+TGG 0.390370 7_3:-2056627 None:intergenic
CATAACATACTATCTGGAAT+TGG 0.394417 7_3:-2058198 None:intergenic
ACCCTATTATCATATTCAAA+AGG 0.401311 7_3:-2058098 None:intergenic
ACAAGAGAAATGTCTTGAAT+AGG 0.403479 7_3:-2056704 None:intergenic
CCCTATTATCATATTCAAAA+GGG 0.409363 7_3:-2058097 None:intergenic
ACAGCCATGGATTGCATGCT+TGG 0.416699 7_3:-2056500 None:intergenic
AGAATGGTAAATTGATAAAA+GGG 0.418250 7_3:-2056453 None:intergenic
TGCGGAAGCTGCAGCGTTGA+AGG 0.431888 7_3:+2057983 Msa1088690:CDS
TTTAAACCAGAAAGGTTCTC+TGG 0.435887 7_3:-2068589 Msa1088710:CDS
GAATTAATTGATCATGCCTT+CGG 0.437522 7_3:-2058584 None:intergenic
TTCTCAAATATTGATGTGGC+AGG 0.445417 7_3:+2058604 Msa1088690:three_prime_UTR
AGGCTATTTGATTACATTCA+GGG 0.450840 7_3:+2057735 Msa1088690:intron
TGAAGACCCTTTGCAGGTGG+TGG 0.452104 7_3:-2057888 None:intergenic
GGAGTTTGTGAATTATGTTA+AGG 0.453586 7_3:-2056479 None:intergenic
TTGCAGGTGGTGGATTTGCT+TGG 0.453762 7_3:-2057878 None:intergenic
CTTCCAATAAGGCAAAGTTT+TGG 0.453837 7_3:+2068494 Msa1088690:three_prime_UTR
AACTATGATGTCATAGAAGC+TGG 0.463929 7_3:+2056629 Msa1088690:CDS
TATGCAGCAGTTAGACAGTT+TGG 0.464469 7_3:+2057933 Msa1088690:CDS
TACTATCTGGAATTGGTGAA+TGG 0.464487 7_3:-2058191 None:intergenic
ATAATAGGGTGAATGAGATA+TGG 0.465751 7_3:+2058111 Msa1088690:CDS
TATAAAACCATGGTCACCTA+TGG 0.467635 7_3:+2068772 Msa1088690:three_prime_UTR
GTTCTAGGACCCCATCCAAA+TGG 0.468767 7_3:+2068526 Msa1088690:three_prime_UTR
TCACCATGACTGTGATATAT+GGG 0.470077 7_3:-2068629 Msa1088710:CDS
GCGTTGAAGGACAGTATTGC+CGG 0.485645 7_3:+2057996 Msa1088690:CDS
CAAAAGAGTTTAAACCAGAA+AGG 0.488467 7_3:-2068597 Msa1088710:CDS
GATGTCATAGAAGCTGGAAA+TGG 0.490076 7_3:+2056635 Msa1088690:CDS
TGAATTGATAAATAAAGTGC+AGG 0.491035 7_3:+2058284 Msa1088690:three_prime_UTR
ATGGAAACATTTATTCCTGC+AGG 0.491928 7_3:+2068667 Msa1088690:three_prime_UTR
GCAGAATCCCATATAAATGA+TGG 0.499567 7_3:-2058633 None:intergenic
AGCAAATCCACCACCTGCAA+AGG 0.503511 7_3:+2057881 Msa1088690:CDS
AGGCTCACACTTGGTACCAT+TGG 0.503980 7_3:-2058473 None:intergenic
TTCTAGGACCCCATCCAAAT+GGG 0.504793 7_3:+2068527 Msa1088690:three_prime_UTR
CCATGGTTGCTTGGAAGGAA+AGG 0.505085 7_3:-2058493 None:intergenic
GGAATTGCAAAGGCCACAAA+AGG 0.506652 7_3:-2068565 Msa1088710:CDS
AGGGTCTTCATGTTCAAAGA+TGG 0.509198 7_3:+2057901 Msa1088690:CDS
CTTTCTTTGCAGCCAAAACA+CGG 0.514214 7_3:-2068391 Msa1088710:CDS
CTCACACTTGGTACCATTGG+TGG 0.515165 7_3:-2058470 None:intergenic
TAATTGATCATGCCTTCGGT+TGG 0.517033 7_3:-2058580 None:intergenic
GGACACTCTATGCGTTTGCA+TGG 0.518091 7_3:-2056605 None:intergenic
CTGTTGGTGGATATAATCTC+AGG 0.519172 7_3:+2068743 Msa1088690:three_prime_UTR
AAGTAGTGACAATACTACTT+TGG 0.522266 7_3:+2068471 Msa1088690:three_prime_UTR
TTTCTTTGCAGCCAAAACAC+GGG 0.530148 7_3:-2068390 Msa1088710:CDS
TGTAGGTTGCCATGGTTGCT+TGG 0.530659 7_3:-2058502 None:intergenic
GTGAACCAAAAGTATCGGTA+TGG 0.532886 7_3:+2068648 Msa1088690:three_prime_UTR
TGTTGTGCTGGTTACAGCCA+TGG 0.533600 7_3:-2056513 None:intergenic
GGTTGCCATGGTTGCTTGGA+AGG 0.534058 7_3:-2058498 None:intergenic
TTCAAAAGGGGCATTGTACT+GGG 0.538233 7_3:-2058084 None:intergenic
TGAGAGCTTCCATGTTGTGC+TGG 0.538362 7_3:-2056525 None:intergenic
CGAACTAAGAAAACTGTTGG+TGG 0.543941 7_3:+2068730 Msa1088690:three_prime_UTR
AACTCCAAGCATGCAATCCA+TGG 0.545237 7_3:+2056496 Msa1088690:exon
GCAAATCCACCACCTGCAAA+GGG 0.549447 7_3:+2057882 Msa1088690:CDS
ATTGAACAAAGCCGTAGAGC+TGG 0.550259 7_3:+2058038 Msa1088690:CDS
GCTTCTATGACATCATAGTT+GGG 0.553146 7_3:-2056626 None:intergenic
TCACAAAATGGTCCATCACT+TGG 0.562399 7_3:-2057816 None:intergenic
TCTGAAGTCTTACCAAGTGA+TGG 0.564116 7_3:+2057804 Msa1088690:CDS
TGCCTTAAAATCTTTCCAAG+TGG 0.564221 7_3:+2058427 Msa1088690:three_prime_UTR
GCAGCAGTTAGACAGTTTGG+TGG 0.565089 7_3:+2057936 Msa1088690:CDS
GGAGAAAGTGTAGGTTGCCA+TGG 0.567270 7_3:-2058510 None:intergenic
CTGAAGCATGACCAGCTCTA+CGG 0.568630 7_3:-2058049 None:intergenic
GGCTATTTGATTACATTCAG+GGG 0.574090 7_3:+2057736 Msa1088690:intron
GCTCGAACTAAGAAAACTGT+TGG 0.579739 7_3:+2068727 Msa1088690:three_prime_UTR
TTTGTCAAAGATACAGATGT+TGG 0.582094 7_3:+2057960 Msa1088690:CDS
TCATGGTGAACCAAAAGTAT+CGG 0.588312 7_3:+2068643 Msa1088690:three_prime_UTR
AGCAGAAGACCACTTAGTAC+CGG 0.588835 7_3:-2058015 None:intergenic
AATTATGTTAAGGAACAGAA+TGG 0.589911 7_3:-2056469 None:intergenic
TGGAAGGAAAGGCTCACACT+TGG 0.591600 7_3:-2058482 None:intergenic
TGGGGTCCTAGAACATGCAT+TGG 0.593187 7_3:-2068517 Msa1088710:CDS
TTAATTCTCAAATATTGATG+TGG 0.595008 7_3:+2058600 Msa1088690:three_prime_UTR
TCACACTTGGTACCATTGGT+GGG 0.597286 7_3:-2058469 None:intergenic
CGATGACAAGGAGAAAGTGT+AGG 0.608595 7_3:-2058519 None:intergenic
CCTTTCCTTCCAAGCAACCA+TGG 0.611308 7_3:+2058493 Msa1088690:three_prime_UTR
ACAGTATTGCCGGTACTAAG+TGG 0.612734 7_3:+2058006 Msa1088690:CDS
CAATATATTTGTCCAACCGA+AGG 0.614323 7_3:+2058568 Msa1088690:three_prime_UTR
GGAAACCTATCACTACCTGC+AGG 0.614488 7_3:-2068682 Msa1088710:CDS
TGCAAAGAAAGGATAGCAGT+GGG 0.620612 7_3:+2068403 Msa1088690:three_prime_UTR
ATGTTCCCTAAAATTCCACT+TGG 0.621066 7_3:-2058442 None:intergenic
TATGGGATTCTGCTTTGTCG+CGG 0.622393 7_3:+2058643 Msa1088690:three_prime_UTR
TGGCTGTAACCAGCACAACA+TGG 0.625059 7_3:+2056516 Msa1088690:CDS
CACCCCATATATCACAGTCA+TGG 0.625790 7_3:+2068626 Msa1088690:three_prime_UTR
CATGCTTATAGTCTGCAGAA+AGG 0.626291 7_3:+2068428 Msa1088690:three_prime_UTR
CCTATTATCATATTCAAAAG+GGG 0.627523 7_3:-2058096 None:intergenic
CTGCAAAGAAAGGATAGCAG+TGG 0.631280 7_3:+2068402 Msa1088690:three_prime_UTR
AAACCAGAAAGGTTCTCTGG+AGG 0.634600 7_3:-2068586 Msa1088710:CDS
TTCTTTGCAGCCAAAACACG+GGG 0.635892 7_3:-2068389 Msa1088710:CDS
GTTCTCTGGAGGAATTGCAA+AGG 0.650068 7_3:-2068575 Msa1088710:CDS
GGTAAGACTTCAGAGAGCAC+AGG 0.651970 7_3:-2057795 None:intergenic
GGGAACATCAGTCCCACCAA+TGG 0.655526 7_3:+2058457 Msa1088690:three_prime_UTR
CAAAGATACAGATGTTGGTG+CGG 0.660769 7_3:+2057965 Msa1088690:CDS
ATTGAATTGAATCGATGACA+AGG 0.668060 7_3:-2058531 None:intergenic
CAGGACCTCATATAAAACCA+TGG 0.671962 7_3:+2068762 Msa1088690:three_prime_UTR
CTACTAGAACTGGTTTCCGG+AGG 0.693581 7_3:+2056732 Msa1088690:CDS
CACCATGACTGTGATATATG+GGG 0.697286 7_3:-2068628 Msa1088710:CDS
ACATGAAGACCCTTTGCAGG+TGG 0.699868 7_3:-2057891 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAATTTATTAATAAAACTCA+TGG + chr7_3:2058905-2058924 Msa1088690:intron 10.0%
!!! AAACATATTTTTTTTTTTGA+AGG + chr7_3:2062344-2062363 Msa1088690:intron 10.0%
!! CAAGAAAAATTATAATATAA+TGG + chr7_3:2062870-2062889 Msa1088690:intron 10.0%
!!! TAACTTATTTTTCATTATTT+TGG + chr7_3:2063623-2063642 Msa1088690:intron 10.0%
!!! AAAAGAAAATATTTTTTCTT+TGG - chr7_3:2063930-2063949 None:intergenic 10.0%
!! ATCTATAAAAATACATAAAA+AGG - chr7_3:2064992-2065011 None:intergenic 10.0%
!!! TGATAAATAATTTTTTTTTG+AGG + chr7_3:2067190-2067209 Msa1088690:intron 10.0%
!!! GATAAATAATTTTTTTTTGA+GGG + chr7_3:2067191-2067210 Msa1088690:intron 10.0%
!! TAATTTATTAATAAAACTCA+TGG + chr7_3:2058905-2058924 Msa1088690:intron 10.0%
!!! GTAAAAAAAAATTTAAAACT+TGG - chr7_3:2068706-2068725 Msa1088710:CDS 10.0%
!! AAAGTTGAATACATATAAAA+GGG + chr7_3:2056978-2056997 Msa1088690:intron 15.0%
!! ATTGAATATACAACAAATTA+AGG + chr7_3:2058964-2058983 Msa1088690:intron 15.0%
!!! AGTTTTATCAATAAATTAGT+CGG - chr7_3:2059245-2059264 Msa1088700:three_prime_UTR 15.0%
!! TAATTTATTGATAAAACTCA+AGG + chr7_3:2059247-2059266 Msa1088690:intron 15.0%
!!! GTAAAAGAAAATTTAAAACT+TGG - chr7_3:2059874-2059893 Msa1088700:CDS 15.0%
!!! TCAAAAGTTGATATATTTAT+AGG - chr7_3:2060037-2060056 Msa1088700:intron 15.0%
!!! TTTTAAGAAAGTTTTTTGTT+GGG - chr7_3:2060065-2060084 Msa1088700:intron 15.0%
!! TAAATAATGATGACTAAATT+TGG + chr7_3:2060276-2060295 Msa1088690:intron 15.0%
!! CAAAAATATTTGATCTTATA+AGG - chr7_3:2060970-2060989 Msa1088700:CDS 15.0%
!!! TCACATAAATTTTATAGAAT+TGG + chr7_3:2061799-2061818 Msa1088690:intron 15.0%
!! ATTTGCTTATAAAAAAACTA+TGG + chr7_3:2061983-2062002 Msa1088690:intron 15.0%
!! TTTGCTTATAAAAAAACTAT+GGG + chr7_3:2061984-2062003 Msa1088690:intron 15.0%
!!! TCTAAACAATTTTTTTTACA+GGG - chr7_3:2062053-2062072 Msa1088700:intron 15.0%
!!! ATCTAAACAATTTTTTTTAC+AGG - chr7_3:2062054-2062073 Msa1088700:intron 15.0%
!!! AATTTGAAATTTTTTGGTTT+TGG + chr7_3:2062085-2062104 Msa1088690:intron 15.0%
!!! ATTTGAAGATTTTTTGATTT+TGG - chr7_3:2062257-2062276 Msa1088700:intron 15.0%
!!! TAAACAAATATTTTTACAGA+AGG + chr7_3:2062292-2062311 Msa1088690:intron 15.0%
!!! ATGTTAACTTTTTGTTTTTT+GGG - chr7_3:2062394-2062413 Msa1088700:intron 15.0%
!! AAAATACGGTATATATTTAT+AGG - chr7_3:2062484-2062503 Msa1088700:intron 15.0%
!!! ATAAATATATACCGTATTTT+CGG + chr7_3:2062484-2062503 Msa1088690:intron 15.0%
!! GAAAAATTATAATATAATGG+TGG + chr7_3:2062873-2062892 Msa1088690:intron 15.0%
!! TCATATATAATAGTAAAACA+TGG + chr7_3:2063140-2063159 Msa1088690:intron 15.0%
!! AAAATAAAAAAAATAACACG+TGG + chr7_3:2063828-2063847 Msa1088690:intron 15.0%
!!! TATTTTCTTTTCTAGTAAAA+AGG + chr7_3:2063963-2063982 Msa1088690:intron 15.0%
!! ACTTACAAAAAGAAAAATTT+GGG + chr7_3:2064174-2064193 Msa1088690:intron 15.0%
!!! TATATGTTTTGTATTTTACA+GGG - chr7_3:2064351-2064370 None:intergenic 15.0%
!!! ATATATGTTTTGTATTTTAC+AGG - chr7_3:2064352-2064371 None:intergenic 15.0%
!! AAATACAAATGAAAAATGTT+TGG - chr7_3:2064722-2064741 None:intergenic 15.0%
!!! AATACATGTTATTTAATTAC+AGG + chr7_3:2065275-2065294 Msa1088690:intron 15.0%
!!! ATACATGTTATTTAATTACA+GGG + chr7_3:2065276-2065295 Msa1088690:intron 15.0%
!!! CAAAAGTACAATTTTAAATA+GGG - chr7_3:2065351-2065370 None:intergenic 15.0%
!!! TCAAAAGTACAATTTTAAAT+AGG - chr7_3:2065352-2065371 None:intergenic 15.0%
!! AAAGTTGAATACATATAAAA+GGG + chr7_3:2056978-2056997 Msa1088690:intron 15.0%
!! ATCAAATATACAACAAATTA+AGG + chr7_3:2067340-2067359 Msa1088690:intron 15.0%
!! GTAATATCAATAAAATGTTT+CGG - chr7_3:2067509-2067528 None:intergenic 15.0%
!!! AGTTTTATCAATAAATTAGT+TGG - chr7_3:2059245-2059264 Msa1088700:three_prime_UTR 15.0%
!! TAATTTATTGATAAAACTCA+CGG + chr7_3:2059247-2059266 Msa1088690:intron 15.0%
!! TATCAAAAAATTGTTACATT+TGG - chr7_3:2068343-2068362 Msa1088710:three_prime_UTR 15.0%
!!! TCAAAAGTTGATATATTTAT+AGG - chr7_3:2060037-2060056 Msa1088700:intron 15.0%
!!! ATAATATTTTCTATGTGCAA+AGG - chr7_3:2056402-2056421 None:intergenic 20.0%
!! AGAATGGTAAATTGATAAAA+GGG - chr7_3:2056456-2056475 None:intergenic 20.0%
!!! AGTTTTTTCAGTAATAGTTT+AGG + chr7_3:2056774-2056793 Msa1088690:intron 20.0%
!! GAAAGTTGAATACATATAAA+AGG + chr7_3:2056977-2056996 Msa1088690:intron 20.0%
!! AATGTGAAATGATTTATACT+TGG + chr7_3:2057434-2057453 Msa1088690:intron 20.0%
!!! AAATTAATTGTCTCTAGAAT+TGG - chr7_3:2057511-2057530 None:intergenic 20.0%
!!! TCAATCTTTTTCTTTTTCTT+AGG + chr7_3:2057715-2057734 Msa1088690:intron 20.0%
!!! TAATTCAGTAATAAGTGTTT+TGG + chr7_3:2058372-2058391 Msa1088690:three_prime_UTR 20.0%
!! TTAATTCTCAAATATTGATG+TGG + chr7_3:2058600-2058619 Msa1088690:three_prime_UTR 20.0%
!! CTGAAAAATTTGAATCTTAT+CGG - chr7_3:2058680-2058699 None:intergenic 20.0%
!! CTAATACCAATGATAAATAT+TGG + chr7_3:2058837-2058856 Msa1088690:intron 20.0%
!! ATATACAACAAATTAAGGAA+AGG + chr7_3:2058969-2058988 Msa1088690:intron 20.0%
!! ATTAGAATAAGAGACAAAAA+AGG - chr7_3:2059042-2059061 Msa1088700:three_prime_UTR 20.0%
!! GAAATATCAACAAAATGTTT+CGG - chr7_3:2059133-2059152 Msa1088700:three_prime_UTR 20.0%
!! ATAGAATATACAAAGTAAGA+TGG + chr7_3:2059308-2059327 Msa1088690:intron 20.0%
!! TATCAAAAAATTGTTACGTT+TGG - chr7_3:2059511-2059530 Msa1088700:three_prime_UTR 20.0%
!!! TATACCATAATTTTTTCCAT+AGG - chr7_3:2059959-2059978 Msa1088700:intron 20.0%
!!! GTTTTAAGAAAGTTTTTTGT+TGG - chr7_3:2060066-2060085 Msa1088700:intron 20.0%
!! AAAAAGCGAGAAATATTTAT+AGG - chr7_3:2060095-2060114 Msa1088700:intron 20.0%
!! ATGTTTATCGTAAATATACA+TGG + chr7_3:2060129-2060148 Msa1088690:intron 20.0%
!! TAGTCATCATTATTTAACAA+TGG - chr7_3:2060272-2060291 Msa1088700:intron 20.0%
!!! AGTTTTGTTTGAGAAATTTT+AGG + chr7_3:2061537-2061556 Msa1088690:intron 20.0%
!!! TTTTCTATCACTAAATCTAA+TGG - chr7_3:2061853-2061872 Msa1088700:intron 20.0%
!!! ATTTTTTTTACAGGGTAAAT+CGG - chr7_3:2062045-2062064 Msa1088700:intron 20.0%
!! AAAATTTCAAATTACATGGT+TGG - chr7_3:2062078-2062097 Msa1088700:intron 20.0%
!! CCAAAAAATTTCAAATTACA+TGG - chr7_3:2062082-2062101 Msa1088700:intron 20.0%
!!! CCATGTAATTTGAAATTTTT+TGG + chr7_3:2062079-2062098 Msa1088690:intron 20.0%
!! AAACCGAAATATTAATGATA+TGG + chr7_3:2062154-2062173 Msa1088690:intron 20.0%
!!! TTTTTTTTTGAAGGATTACA+AGG + chr7_3:2062353-2062372 Msa1088690:intron 20.0%
!!! TTTTTTTTGAAGGATTACAA+GGG + chr7_3:2062354-2062373 Msa1088690:intron 20.0%
!!! CATGTTAACTTTTTGTTTTT+TGG - chr7_3:2062395-2062414 Msa1088700:intron 20.0%
!! AAAATATTGTCTTCAAGTAA+AGG + chr7_3:2062432-2062451 Msa1088690:intron 20.0%
!!! TGTTCATACAGTATTTTTTA+CGG + chr7_3:2063508-2063527 Msa1088690:intron 20.0%
!! AATTGACTAAATCCATATTA+AGG + chr7_3:2063563-2063582 Msa1088690:intron 20.0%
!!! GTTTTGTAGTTTTTTTTCTT+AGG - chr7_3:2063759-2063778 None:intergenic 20.0%
!!! TTTATTTTTTTTTGCCTTGA+GGG - chr7_3:2063816-2063835 None:intergenic 20.0%
!!! TTTTATTTTTTTTTGCCTTG+AGG - chr7_3:2063817-2063836 None:intergenic 20.0%
!!! ATTTTTGTCCAATTTTAACT+TGG - chr7_3:2063871-2063890 None:intergenic 20.0%
!!! TTTTTTCTTTGGTAACATAT+TGG - chr7_3:2063919-2063938 None:intergenic 20.0%
!! CACTTACAAAAAGAAAAATT+TGG + chr7_3:2064173-2064192 Msa1088690:intron 20.0%
!! ATAGTGTGCTAAATAAAATT+AGG - chr7_3:2064251-2064270 None:intergenic 20.0%
!! AAAATTAAATTTCTTCAACC+AGG + chr7_3:2064512-2064531 Msa1088690:intron 20.0%
!! AAATTAAATTTCTTCAACCA+GGG + chr7_3:2064513-2064532 Msa1088690:intron 20.0%
!! ATTCATAATTAATTTATCCC+TGG - chr7_3:2064533-2064552 None:intergenic 20.0%
!! AAACTCAAAAAACAAAACAA+CGG - chr7_3:2065062-2065081 None:intergenic 20.0%
!!! ATTTTTTCATGATTTCTTAG+AGG - chr7_3:2065176-2065195 None:intergenic 20.0%
!! AGAATGGTAAATTGATAAAA+GGG - chr7_3:2056456-2056475 None:intergenic 20.0%
!!! AGTTTTTTCAGTAATAGTTT+AGG + chr7_3:2056774-2056793 Msa1088690:intron 20.0%
!! GAAAGTTGAATACATATAAA+AGG + chr7_3:2056977-2056996 Msa1088690:intron 20.0%
!!! TAATTCAGTAATAAGTGTTT+TGG + chr7_3:2058372-2058391 Msa1088690:three_prime_UTR 20.0%
!! TTAATTCTCAAATATTGATG+TGG + chr7_3:2058600-2058619 Msa1088690:three_prime_UTR 20.0%
!! CTGAAAAATTTGAATCTTAT+CGG - chr7_3:2058680-2058699 None:intergenic 20.0%
!! GAAATACCAATGATAAATAT+TGG + chr7_3:2067213-2067232 Msa1088690:intron 20.0%
!! ATTAGAATAAGAGAAGAAAA+AGG - chr7_3:2067418-2067437 None:intergenic 20.0%
!!! TTAGTTGGTATTATTTAGTA+AGG - chr7_3:2068062-2068081 Msa1088710:three_prime_UTR 20.0%
!! ATAGAATATACAAAGTAAGA+TGG + chr7_3:2059308-2059327 Msa1088690:intron 20.0%
!!! TGATAAAAGGGTTTTTTCTA+TGG - chr7_3:2056444-2056463 None:intergenic 25.0%
! CAGAATGGTAAATTGATAAA+AGG - chr7_3:2056457-2056476 None:intergenic 25.0%
! AATTATGTTAAGGAACAGAA+TGG - chr7_3:2056472-2056491 None:intergenic 25.0%
! CTTATCTCAATTTCATTATC+AGG + chr7_3:2056560-2056579 Msa1088690:CDS 25.0%
! GTAAAAAAACAAATTACCTC+CGG - chr7_3:2056751-2056770 None:intergenic 25.0%
! TTTCAAATTATTAGCTGTGT+CGG - chr7_3:2057094-2057113 None:intergenic 25.0%
! TTTAGTGTAATTACAAGTGT+CGG + chr7_3:2057126-2057145 Msa1088690:intron 25.0%
! AACTAATTCTAACTTGAAGT+TGG - chr7_3:2057226-2057245 None:intergenic 25.0%
!!! ACAATTGATTTTAGCATGTT+TGG - chr7_3:2057547-2057566 None:intergenic 25.0%
! ATGCTAAAATCAATTGTTTC+TGG + chr7_3:2057550-2057569 Msa1088690:intron 25.0%
! TGAACTTAATGATCATTCAT+TGG - chr7_3:2057621-2057640 None:intergenic 25.0%
!!! AAGTTTTAATGAAGTGTTTG+TGG + chr7_3:2057655-2057674 Msa1088690:intron 25.0%
! CCTATTATCATATTCAAAAG+GGG - chr7_3:2058099-2058118 None:intergenic 25.0%
! CCCTATTATCATATTCAAAA+GGG - chr7_3:2058100-2058119 None:intergenic 25.0%
!! CCCTTTTGAATATGATAATA+GGG + chr7_3:2058097-2058116 Msa1088690:CDS 25.0%
! ACCCTATTATCATATTCAAA+AGG - chr7_3:2058101-2058120 None:intergenic 25.0%
!!! TTCTTGTTTGATTTGGAAAA+TGG + chr7_3:2058134-2058153 Msa1088690:CDS 25.0%
! AACTTACATAACATACTATC+TGG - chr7_3:2058207-2058226 None:intergenic 25.0%
! TGAATTGATAAATAAAGTGC+AGG + chr7_3:2058284-2058303 Msa1088690:three_prime_UTR 25.0%
!! CGATAAGATTCAAATTTTTC+AGG + chr7_3:2058678-2058697 Msa1088690:three_prime_UTR 25.0%
! AATAAATTTAAGAGTCAAGG+AGG - chr7_3:2058713-2058732 None:intergenic 25.0%
! GAGAATAAATTTAAGAGTCA+AGG - chr7_3:2058716-2058735 None:intergenic 25.0%
! TGACTCTTAAATTTATTCTC+AGG + chr7_3:2058716-2058735 Msa1088690:intron 25.0%
! TAATTATCGTGACAAGAAAA+AGG - chr7_3:2058794-2058813 None:intergenic 25.0%
! TACCAATGATAAATATTGGT+TGG + chr7_3:2058841-2058860 Msa1088690:intron 25.0%
! TACCAACCAATATTTATCAT+TGG - chr7_3:2058846-2058865 None:intergenic 25.0%
!! AAATTAAGGAAAGGTGTAAA+GGG + chr7_3:2058978-2058997 Msa1088690:intron 25.0%
! TTAGTCGGTATTATTTAGTA+AGG - chr7_3:2059230-2059249 Msa1088700:three_prime_UTR 25.0%
! TATACAAAGTAAGATGGAAA+AGG + chr7_3:2059314-2059333 Msa1088690:intron 25.0%
! TAAGTGTTTGTGATAATTTC+TGG - chr7_3:2059351-2059370 Msa1088700:three_prime_UTR 25.0%
! GTATAAGTTAGCAACAAAAA+AGG + chr7_3:2059974-2059993 Msa1088690:intron 25.0%
! GAGACCTTAATATATCTTAA+AGG + chr7_3:2060195-2060214 Msa1088690:intron 25.0%
!!! GAGACCTTTAAGATATATTA+AGG - chr7_3:2060202-2060221 Msa1088700:intron 25.0%
! ATGATGACTAAATTTGGTAA+CGG + chr7_3:2060282-2060301 Msa1088690:intron 25.0%
! ACCAAAATCCAAATCATAAT+GGG - chr7_3:2060444-2060463 Msa1088700:CDS 25.0%
! AACCAAAATCCAAATCATAA+TGG - chr7_3:2060445-2060464 Msa1088700:CDS 25.0%
! TGATTTATTAGGCTTACTTA+TGG - chr7_3:2060671-2060690 Msa1088700:CDS 25.0%
! CTGATATATAATGTGTTTCT+AGG - chr7_3:2060813-2060832 Msa1088700:intron 25.0%
! CTAGAAACACATTATATATC+AGG + chr7_3:2060811-2060830 Msa1088690:intron 25.0%
! TCAGGTGATGTTAATTATTT+AGG + chr7_3:2060829-2060848 Msa1088690:intron 25.0%
! CAGGTGATGTTAATTATTTA+GGG + chr7_3:2060830-2060849 Msa1088690:intron 25.0%
! TGCGTGTATTAAATAGAATA+TGG + chr7_3:2060936-2060955 Msa1088690:intron 25.0%
! TTATTTACAGAATATGCTAC+CGG - chr7_3:2061146-2061165 Msa1088700:intron 25.0%
! GCATATTCTGTAAATAAGTT+AGG + chr7_3:2061149-2061168 Msa1088690:intron 25.0%
! ACATTGATAAATTGAGAGTA+AGG - chr7_3:2061237-2061256 Msa1088700:intron 25.0%
! AATTTATCAATGTGAAATGC+AGG + chr7_3:2061244-2061263 Msa1088690:intron 25.0%
! ATTTATCAATGTGAAATGCA+GGG + chr7_3:2061245-2061264 Msa1088690:intron 25.0%
! CTAATGAATAATTGATGTGT+AGG - chr7_3:2061460-2061479 Msa1088700:intron 25.0%
!! ACTATCTAGAATGATACTAT+GGG - chr7_3:2061520-2061539 Msa1088700:intron 25.0%
!! AACTATCTAGAATGATACTA+TGG - chr7_3:2061521-2061540 Msa1088700:intron 25.0%
!!! TACTTCATGTTGATTTGATA+TGG + chr7_3:2061619-2061638 Msa1088690:intron 25.0%
! CTGCCATATCATTAATATTT+CGG - chr7_3:2062160-2062179 Msa1088700:intron 25.0%
! GAAATATTAATGATATGGCA+GGG + chr7_3:2062159-2062178 Msa1088690:intron 25.0%
! TGAAATTCTCTCAAATTACA+AGG + chr7_3:2062189-2062208 Msa1088690:intron 25.0%
! TTTGTAATTTGATGTCATGA+AGG + chr7_3:2062230-2062249 Msa1088690:intron 25.0%
! TAGAAATCGCTAATATTACA+AGG + chr7_3:2062320-2062339 Msa1088690:intron 25.0%
!! AATTGCTATTATTCCTCTAT+GGG - chr7_3:2062703-2062722 Msa1088700:CDS 25.0%
!! TAATTGCTATTATTCCTCTA+TGG - chr7_3:2062704-2062723 Msa1088700:CDS 25.0%
!!! ATCATATCTCTAAAGTCATA+AGG - chr7_3:2062782-2062801 Msa1088700:five_prime_UTR 25.0%
! TTAGAGATATGATATGATGA+TGG + chr7_3:2062789-2062808 Msa1088690:intron 25.0%
!! TATAATTTTTCTTGCGTGAA+AGG - chr7_3:2062864-2062883 Msa1088700:five_prime_UTR 25.0%
! AAATGTTATCTTGTGTTCTT+GGG - chr7_3:2062972-2062991 None:intergenic 25.0%
! AAAATGTTATCTTGTGTTCT+TGG - chr7_3:2062973-2062992 None:intergenic 25.0%
! AAGCAATGATATATATCTAG+AGG + chr7_3:2063027-2063046 Msa1088690:intron 25.0%
! AGCAATGATATATATCTAGA+GGG + chr7_3:2063028-2063047 Msa1088690:intron 25.0%
!! ATTGAGATTGGTTGTTTATT+CGG - chr7_3:2063071-2063090 None:intergenic 25.0%
!!! TGTTGATTTTCCATGTTTTA+CGG - chr7_3:2063105-2063124 None:intergenic 25.0%
!!! GTTCATACAGTATTTTTTAC+GGG + chr7_3:2063509-2063528 Msa1088690:intron 25.0%
!! AAAAAGCTTAATTGCAGTTT+TGG + chr7_3:2063699-2063718 Msa1088690:intron 25.0%
!!! GGTCACAAATATTTTTTCTT+TGG - chr7_3:2063898-2063917 None:intergenic 25.0%
!! CTTTTTGTAAGTGTGTTAAT+GGG - chr7_3:2064166-2064185 None:intergenic 25.0%
!! TCTTTTTGTAAGTGTGTTAA+TGG - chr7_3:2064167-2064186 None:intergenic 25.0%
! TTTATTTAGCACACTATTGA+CGG + chr7_3:2064254-2064273 Msa1088690:intron 25.0%
!! GTTCATCTCTCTAATTTTAA+CGG + chr7_3:2064277-2064296 Msa1088690:intron 25.0%
!!! TTCATCTCTCTAATTTTAAC+GGG + chr7_3:2064278-2064297 Msa1088690:intron 25.0%
! CAGACATAATGTATATTACA+TGG - chr7_3:2064321-2064340 None:intergenic 25.0%
! TAGACTACGTGTATATTATA+GGG - chr7_3:2064414-2064433 None:intergenic 25.0%
! TTAGACTACGTGTATATTAT+AGG - chr7_3:2064415-2064434 None:intergenic 25.0%
! TTTAACGTGCTAAACATTTA+TGG - chr7_3:2064475-2064494 None:intergenic 25.0%
! TCCTCTATTCATAATTATGA+GGG - chr7_3:2064563-2064582 None:intergenic 25.0%
! TTCCTCTATTCATAATTATG+AGG - chr7_3:2064564-2064583 None:intergenic 25.0%
! ACTACAAAATTTCATTGTGA+AGG + chr7_3:2064811-2064830 Msa1088690:intron 25.0%
!! AATTTCAATTTTGCACGTTT+TGG + chr7_3:2064911-2064930 Msa1088690:intron 25.0%
!!! CATATTTTAACGTTCTTAAC+TGG + chr7_3:2065150-2065169 Msa1088690:intron 25.0%
! CATGAAAAAATTCAATCTCT+TGG + chr7_3:2065185-2065204 Msa1088690:intron 25.0%
! GTCATGAATCGAAATAAAAT+AGG - chr7_3:2065379-2065398 None:intergenic 25.0%
!!! ATTTTATTTCGATTCATGAC+TGG + chr7_3:2065379-2065398 Msa1088690:intron 25.0%
! TGTATACTATACAAAATGTG+TGG + chr7_3:2065484-2065503 Msa1088690:intron 25.0%
!!! TGATAAAAGGGTTTTTTCTA+TGG - chr7_3:2056444-2056463 None:intergenic 25.0%
! CAGAATGGTAAATTGATAAA+AGG - chr7_3:2056457-2056476 None:intergenic 25.0%
! AATTATGTTAAGGAACAGAA+TGG - chr7_3:2056472-2056491 None:intergenic 25.0%
! CTTATCTCAATTTCATTATC+AGG + chr7_3:2056560-2056579 Msa1088690:CDS 25.0%
! GTAAAAAAACAAATTACCTC+CGG - chr7_3:2056751-2056770 None:intergenic 25.0%
! TTTCAAATTATTAGCTGTGT+CGG - chr7_3:2057094-2057113 None:intergenic 25.0%
! TTTAGTGTAATTACAAGTGT+TGG + chr7_3:2057126-2057145 Msa1088690:intron 25.0%
!!! TTCTTGTTTGATTTGGAAAA+TGG + chr7_3:2058134-2058153 Msa1088690:CDS 25.0%
! AACTTACATAACATACTATC+TGG - chr7_3:2058207-2058226 None:intergenic 25.0%
! TGAATTGATAAATAAAGTGC+AGG + chr7_3:2058284-2058303 Msa1088690:three_prime_UTR 25.0%
!! CGATAAGATTCAAATTTTTC+AGG + chr7_3:2058678-2058697 Msa1088690:three_prime_UTR 25.0%
! TAATTATCGTGACAAGAAAA+AGG - chr7_3:2058794-2058813 None:intergenic 25.0%
! TACCAATGATAAATATTGGT+TGG + chr7_3:2058841-2058860 Msa1088690:intron 25.0%
! TACCAACCAATATTTATCAT+TGG - chr7_3:2058846-2058865 None:intergenic 25.0%
! AAATTAAGGAAAGCTGTAAA+GGG + chr7_3:2067354-2067373 Msa1088690:intron 25.0%
! ATATCAATAAAATGTTTCGG+TGG - chr7_3:2067506-2067525 None:intergenic 25.0%
! AATCGTATAACATACATTTG+AGG + chr7_3:2067687-2067706 Msa1088690:intron 25.0%
! AATGATATGATGTACAAATC+CGG + chr7_3:2067861-2067880 Msa1088690:intron 25.0%
! GAAAAAATGCAATTCAAATC+CGG - chr7_3:2067883-2067902 Msa1088710:three_prime_UTR 25.0%
! ATGATGTTAACTGTATGAAT+AGG - chr7_3:2067946-2067965 Msa1088710:three_prime_UTR 25.0%
! TATACAAAGTAAGATGGAAA+AGG + chr7_3:2059314-2059333 Msa1088690:intron 25.0%
! TAAGTGTTTGTGATAATTTC+TGG - chr7_3:2059351-2059370 Msa1088700:three_prime_UTR 25.0%
!!! TACCATAACATTTTTTCCAT+AGG - chr7_3:2068791-2068810 Msa1088710:intron 25.0%
! GTATAAGTTAGCAACAAAAA+AGG + chr7_3:2059974-2059993 Msa1088690:intron 25.0%
GGAGTTTGTGAATTATGTTA+AGG - chr7_3:2056482-2056501 None:intergenic 30.0%
AATGTCTTGAATAGGAGAAT+TGG - chr7_3:2056699-2056718 None:intergenic 30.0%
ACAAGAGAAATGTCTTGAAT+AGG - chr7_3:2056707-2056726 None:intergenic 30.0%
!! GAGTTTGATTTTGACATGTT+TGG - chr7_3:2057281-2057300 None:intergenic 30.0%
GATCAAGTTTAGTAACTCTT+CGG - chr7_3:2057697-2057716 None:intergenic 30.0%
TAGGCTATTTGATTACATTC+AGG + chr7_3:2057734-2057753 Msa1088690:intron 30.0%
AGGCTATTTGATTACATTCA+GGG + chr7_3:2057735-2057754 Msa1088690:intron 30.0%
ACAAATGAAGACTCACAAAA+TGG - chr7_3:2057831-2057850 None:intergenic 30.0%
TTTGTCAAAGATACAGATGT+TGG + chr7_3:2057960-2057979 Msa1088690:CDS 30.0%
! CCCCTTTTGAATATGATAAT+AGG + chr7_3:2058096-2058115 Msa1088690:CDS 30.0%
ATAATAGGGTGAATGAGATA+TGG + chr7_3:2058111-2058130 Msa1088690:CDS 30.0%
! GATATGGTTCTTGTTTGATT+TGG + chr7_3:2058127-2058146 Msa1088690:CDS 30.0%
! CATAACATACTATCTGGAAT+TGG - chr7_3:2058201-2058220 None:intergenic 30.0%
!! GTAATAAGTGTTTTGGATCA+TGG + chr7_3:2058379-2058398 Msa1088690:three_prime_UTR 30.0%
! TTCCACTTGGAAAGATTTTA+AGG - chr7_3:2058432-2058451 None:intergenic 30.0%
! ATCTTTCCAAGTGGAATTTT+AGG + chr7_3:2058436-2058455 Msa1088690:three_prime_UTR 30.0%
! TCTTTCCAAGTGGAATTTTA+GGG + chr7_3:2058437-2058456 Msa1088690:three_prime_UTR 30.0%
ATTGAATTGAATCGATGACA+AGG - chr7_3:2058534-2058553 None:intergenic 30.0%
GAATTAATTGATCATGCCTT+CGG - chr7_3:2058587-2058606 None:intergenic 30.0%
! GTTTTCGCCATCATTTATAT+GGG + chr7_3:2058626-2058645 Msa1088690:three_prime_UTR 30.0%
TCTCACAAAGATAAGTTACA+AGG + chr7_3:2058936-2058955 Msa1088690:intron 30.0%
! CAAATTAAGGAAAGGTGTAA+AGG + chr7_3:2058977-2058996 Msa1088690:intron 30.0%
TAGTATTGCATGAGTATGTT+TGG - chr7_3:2059083-2059102 Msa1088700:intron 30.0%
ATATCAACAAAATGTTTCGG+TGG - chr7_3:2059130-2059149 Msa1088700:three_prime_UTR 30.0%
CAATCTAAATCGCAAGTTAA+AGG + chr7_3:2059152-2059171 Msa1088690:intron 30.0%
AATAAAACAAGAGAGGGAAA+GGG - chr7_3:2059432-2059451 Msa1088700:three_prime_UTR 30.0%
!!! TTTCCCTCTCTTGTTTTATT+CGG + chr7_3:2059432-2059451 Msa1088690:intron 30.0%
! GATATTACAGTTTTTGCAGA+CGG + chr7_3:2059527-2059546 Msa1088690:intron 30.0%
AAGTAGTGACAATACTACTT+TGG + chr7_3:2059639-2059658 Msa1088690:intron 30.0%
!! TTCATTTTTCCCATTTGGAT+GGG - chr7_3:2059707-2059726 Msa1088700:CDS 30.0%
!! TTTCATTTTTCCCATTTGGA+TGG - chr7_3:2059708-2059727 Msa1088700:CDS 30.0%
!! CAAGTTTCATTTTTCCCATT+TGG - chr7_3:2059712-2059731 Msa1088700:CDS 30.0%
TTTAAACCAGAAAGGTTCTA+TGG - chr7_3:2059760-2059779 Msa1088700:CDS 30.0%
CAAAAGAGTTTAAACCAGAA+AGG - chr7_3:2059768-2059787 Msa1088700:CDS 30.0%
GTCACCTATGGAAAAAATTA+TGG + chr7_3:2059952-2059971 Msa1088690:intron 30.0%
ATATATTAAGGTCTCCACAA+TGG - chr7_3:2060190-2060209 Msa1088700:intron 30.0%
!!! ACGTGACTTTTTTTATGACA+TGG - chr7_3:2060229-2060248 Msa1088700:intron 30.0%
ATGTCATAAAAAAAGTCACG+TGG + chr7_3:2060228-2060247 Msa1088690:intron 30.0%
TGACTTAACCCATTATGATT+TGG + chr7_3:2060433-2060452 Msa1088690:intron 30.0%
!! ACCCATTATGATTTGGATTT+TGG + chr7_3:2060440-2060459 Msa1088690:intron 30.0%
! CAAGAAGTTTTGCAAGTTTT+TGG - chr7_3:2060469-2060488 Msa1088700:CDS 30.0%
! ATCTTTGTTAGTTTGGACAA+TGG - chr7_3:2060533-2060552 Msa1088700:CDS 30.0%
TCAAATAAGCTTGAAACTCA+AGG - chr7_3:2060646-2060665 Msa1088700:CDS 30.0%
GCCTAATAAATCATCATTGA+TGG + chr7_3:2060678-2060697 Msa1088690:intron 30.0%
GCCATCAATGATGATTTATT+AGG - chr7_3:2060682-2060701 Msa1088700:CDS 30.0%
GAGATTTATGATTTAGTCGA+GGG - chr7_3:2060745-2060764 Msa1088700:CDS 30.0%
AGAGATTTATGATTTAGTCG+AGG - chr7_3:2060746-2060765 Msa1088700:CDS 30.0%
TGTTTGTCTTACCATATCAT+TGG + chr7_3:2060911-2060930 Msa1088690:intron 30.0%
TTTGATCTTATAAGGTTGCA+GGG - chr7_3:2060962-2060981 Msa1088700:CDS 30.0%
ATTTGATCTTATAAGGTTGC+AGG - chr7_3:2060963-2060982 Msa1088700:CDS 30.0%
TGATATGATTAGCAAATGGA+AGG - chr7_3:2061104-2061123 Msa1088700:CDS 30.0%
! TCCATTTGCTAATCATATCA+TGG + chr7_3:2061104-2061123 Msa1088690:intron 30.0%
!! GTTGGATTAGTAAGTTATGA+GGG - chr7_3:2061304-2061323 Msa1088700:CDS 30.0%
TATTCATTAGCAATCATCGT+TGG + chr7_3:2061470-2061489 Msa1088690:intron 30.0%
!!! TTTGAGAAATTTTAGGACAG+TGG + chr7_3:2061544-2061563 Msa1088690:intron 30.0%
!! TTCATGTTGATTTGATATGG+TGG + chr7_3:2061622-2061641 Msa1088690:intron 30.0%
TTGACAAAAATGCTAAACCT+AGG - chr7_3:2061754-2061773 Msa1088700:intron 30.0%
GTACAAAATCGATGATATGA+CGG + chr7_3:2062127-2062146 Msa1088690:intron 30.0%
TACAAAATCGATGATATGAC+GGG + chr7_3:2062128-2062147 Msa1088690:intron 30.0%
CGAAATATTAATGATATGGC+AGG + chr7_3:2062158-2062177 Msa1088690:intron 30.0%
GCAATGATATATATCTAGAG+GGG + chr7_3:2063029-2063048 Msa1088690:intron 30.0%
! TCTGTGCTTACTTTATGTTT+TGG + chr7_3:2063293-2063312 Msa1088690:intron 30.0%
!!! ACTTTATGTTTTGGTTTAGC+AGG + chr7_3:2063302-2063321 Msa1088690:intron 30.0%
TGGGTGGATAATATCATATT+AGG + chr7_3:2063593-2063612 Msa1088690:intron 30.0%
GGGTGGATAATATCATATTA+GGG + chr7_3:2063594-2063613 Msa1088690:intron 30.0%
AACGTAGACCAAGTTAAAAT+TGG + chr7_3:2063860-2063879 Msa1088690:intron 30.0%
! AAGTGTGTTAATGGGATTTT+GGG - chr7_3:2064158-2064177 None:intergenic 30.0%
! TAAGTGTGTTAATGGGATTT+TGG - chr7_3:2064159-2064178 None:intergenic 30.0%
GTGTGCTAAATAAAATTAGG+AGG - chr7_3:2064248-2064267 None:intergenic 30.0%
TTATTTAGCACACTATTGAC+GGG + chr7_3:2064255-2064274 Msa1088690:intron 30.0%
TCCCTCATAATTATGAATAG+AGG + chr7_3:2064559-2064578 Msa1088690:intron 30.0%
TGAATAGAGGAATACTTACT+TGG + chr7_3:2064572-2064591 Msa1088690:intron 30.0%
CATAAGAGAAAGTCTAACAT+AGG - chr7_3:2064748-2064767 None:intergenic 30.0%
!! ATTTAGTTCCCCAATTTTGT+AGG - chr7_3:2064859-2064878 None:intergenic 30.0%
!!! TTACGATAATGTTTTTTGCC+CGG + chr7_3:2065426-2065445 Msa1088690:intron 30.0%
GGAGTTTGTGAATTATGTTA+AGG - chr7_3:2056482-2056501 None:intergenic 30.0%
AATGTCTTGAATAGGAGAAT+TGG - chr7_3:2056699-2056718 None:intergenic 30.0%
ACAAGAGAAATGTCTTGAAT+AGG - chr7_3:2056707-2056726 None:intergenic 30.0%
TTTGTCAAAGATACAGATGT+TGG + chr7_3:2057960-2057979 Msa1088690:CDS 30.0%
CCTATTATCGTATTCAAAAG+GGG - chr7_3:2066442-2066461 None:intergenic 30.0%
CCCTATTATCGTATTCAAAA+GGG - chr7_3:2066443-2066462 None:intergenic 30.0%
! CCCTTTTGAATACGATAATA+GGG + chr7_3:2066440-2066459 Msa1088690:intron 30.0%
ACCCTATTATCGTATTCAAA+AGG - chr7_3:2066444-2066463 None:intergenic 30.0%
ATAATAGGGTGAATGAGATA+TGG + chr7_3:2058111-2058130 Msa1088690:CDS 30.0%
! GATATGGTTCTTGTTTGATT+TGG + chr7_3:2058127-2058146 Msa1088690:CDS 30.0%
! CATAACATACTATCTGGAAT+TGG - chr7_3:2058201-2058220 None:intergenic 30.0%
!! GTAATAAGTGTTTTGGATCT+TGG + chr7_3:2066722-2066741 Msa1088690:intron 30.0%
! TTCCACTTGGAAAGATTTTA+AGG - chr7_3:2058432-2058451 None:intergenic 30.0%
! ATCTTTCCAAGTGGAATTTT+AGG + chr7_3:2058436-2058455 Msa1088690:three_prime_UTR 30.0%
! TCTTTCCAAGTGGAATTTTA+GGG + chr7_3:2058437-2058456 Msa1088690:three_prime_UTR 30.0%
ATTGAATTGAATCGATGACA+AGG - chr7_3:2058534-2058553 None:intergenic 30.0%
GAATTAATTGATCATGCCTT+CGG - chr7_3:2058587-2058606 None:intergenic 30.0%
! GTTTTCGCCATCATTTATAT+GGG + chr7_3:2058626-2058645 Msa1088690:three_prime_UTR 30.0%
AAGAAATTTAAGAGTCAAGG+AGG - chr7_3:2067056-2067075 None:intergenic 30.0%
GAGAAGAAATTTAAGAGTCA+AGG - chr7_3:2067059-2067078 None:intergenic 30.0%
TGACTCTTAAATTTCTTCTC+AGG + chr7_3:2067059-2067078 Msa1088690:intron 30.0%
TCTCACAAAGATATGTTACA+AGG + chr7_3:2067312-2067331 Msa1088690:intron 30.0%
CAAATTAAGGAAAGCTGTAA+AGG + chr7_3:2067353-2067372 Msa1088690:intron 30.0%
CAATCTAAATCGCAAGTTAA+AGG + chr7_3:2059152-2059171 Msa1088690:intron 30.0%
TACGATTGAATTCGACAATT+GGG - chr7_3:2067674-2067693 Msa1088710:three_prime_UTR 30.0%
ATACGATTGAATTCGACAAT+TGG - chr7_3:2067675-2067694 Msa1088710:three_prime_UTR 30.0%
!!! GCATTTTTTCTCAGTTTCAT+AGG + chr7_3:2067893-2067912 Msa1088690:intron 30.0%
GAAGACATCAAACAATTGTA+TGG + chr7_3:2067920-2067939 Msa1088690:intron 30.0%
!! AAACAAGATTGAAGCACTTT+TGG - chr7_3:2067969-2067988 Msa1088710:three_prime_UTR 30.0%
! AAAGTGCTTCAATCTTGTTT+CGG + chr7_3:2067969-2067988 Msa1088690:intron 30.0%
AATAAAACAAGAGAGGGAAA+GGG - chr7_3:2059432-2059451 Msa1088700:three_prime_UTR 30.0%
!!! TTTCCCTCTCTTGTTTTATT+CGG + chr7_3:2059432-2059451 Msa1088690:intron 30.0%
TAGTATTGCATGTGTATGTT+AGG - chr7_3:2068296-2068315 Msa1088710:three_prime_UTR 30.0%
! GATATTACAGTTTTTGCAGA+CGG + chr7_3:2059527-2059546 Msa1088690:intron 30.0%
AAGTAGTGACAATACTACTT+TGG + chr7_3:2059639-2059658 Msa1088690:intron 30.0%
!! TTCATTTTTCCCATTTGGAT+GGG - chr7_3:2059707-2059726 Msa1088700:CDS 30.0%
!! TTTCATTTTTCCCATTTGGA+TGG - chr7_3:2059708-2059727 Msa1088700:CDS 30.0%
!! CAAGTTTCATTTTTCCCATT+TGG - chr7_3:2059712-2059731 Msa1088700:CDS 30.0%
! AAATGAAACTTGACCTTTTG+TGG + chr7_3:2059720-2059739 Msa1088690:intron 30.0%
CAAAAGAGTTTAAACCAGAA+AGG - chr7_3:2059768-2059787 Msa1088700:CDS 30.0%
CACCTATGGAAAAAATGTTA+TGG + chr7_3:2068786-2068805 Msa1088690:three_prime_UTR 30.0%
GCTTCTATGACATCATAGTT+GGG - chr7_3:2056629-2056648 None:intergenic 35.0%
AGCTTCTATGACATCATAGT+TGG - chr7_3:2056630-2056649 None:intergenic 35.0%
AACTATGATGTCATAGAAGC+TGG + chr7_3:2056629-2056648 Msa1088690:CDS 35.0%
GACGTTATAATTCGTCTGTT+TGG + chr7_3:2056669-2056688 Msa1088690:CDS 35.0%
! TTAGTGTGTGTTTGGTTTCA+CGG - chr7_3:2057597-2057616 None:intergenic 35.0%
!! TCATTGGTTTAGTGTGTGTT+TGG - chr7_3:2057605-2057624 None:intergenic 35.0%
AGTTTAGTAACTCTTCGGAT+GGG - chr7_3:2057692-2057711 None:intergenic 35.0%
AAGTTTAGTAACTCTTCGGA+TGG - chr7_3:2057693-2057712 None:intergenic 35.0%
GGCTATTTGATTACATTCAG+GGG + chr7_3:2057736-2057755 Msa1088690:intron 35.0%
!!! CTGTCATCTCAATTTTTTGC+TGG - chr7_3:2057773-2057792 None:intergenic 35.0%
! TACTATCTGGAATTGGTGAA+TGG - chr7_3:2058194-2058213 None:intergenic 35.0%
!! TAAGTGTTTTGGATCATGGA+AGG + chr7_3:2058383-2058402 Msa1088690:three_prime_UTR 35.0%
TGCCTTAAAATCTTTCCAAG+TGG + chr7_3:2058427-2058446 Msa1088690:three_prime_UTR 35.0%
ATGTTCCCTAAAATTCCACT+TGG - chr7_3:2058445-2058464 None:intergenic 35.0%
CAATATATTTGTCCAACCGA+AGG + chr7_3:2058568-2058587 Msa1088690:three_prime_UTR 35.0%
TTCTCAAATATTGATGTGGC+AGG + chr7_3:2058604-2058623 Msa1088690:three_prime_UTR 35.0%
! GGTTTTCGCCATCATTTATA+TGG + chr7_3:2058625-2058644 Msa1088690:three_prime_UTR 35.0%
GCAGAATCCCATATAAATGA+TGG - chr7_3:2058636-2058655 None:intergenic 35.0%
!! GGAAGCATGAATTGAACTTT+TGG - chr7_3:2058769-2058788 None:intergenic 35.0%
TATCGTGACAAGAAAAAGGA+TGG - chr7_3:2058790-2058809 None:intergenic 35.0%
CACGATAATTAGTTGTTGCA+CGG + chr7_3:2058803-2058822 Msa1088690:intron 35.0%
GACTATGCTCTCTAATTCTT+TGG - chr7_3:2059020-2059039 Msa1088700:three_prime_UTR 35.0%
CAAATGCCAACCAATAAACA+CGG - chr7_3:2059204-2059223 Msa1088700:three_prime_UTR 35.0%
TCTCAGAGAGTTAAGTTACA+AGG + chr7_3:2059278-2059297 Msa1088690:intron 35.0%
TTGATTAGTACTTGGTTGGT+TGG - chr7_3:2059397-2059416 Msa1088700:three_prime_UTR 35.0%
TTGGTTGATTAGTACTTGGT+TGG - chr7_3:2059401-2059420 Msa1088700:three_prime_UTR 35.0%
GCATTTGGTTGATTAGTACT+TGG - chr7_3:2059405-2059424 Msa1088700:three_prime_UTR 35.0%
GAATAAAACAAGAGAGGGAA+AGG - chr7_3:2059433-2059452 Msa1088700:three_prime_UTR 35.0%
AAGCCGAATAAAACAAGAGA+GGG - chr7_3:2059438-2059457 Msa1088700:three_prime_UTR 35.0%
TAGTATTGCATGTGTGTGTT+AGG - chr7_3:2059464-2059483 Msa1088700:three_prime_UTR 35.0%
! TACTACTTTGGCTTCCAATA+AGG + chr7_3:2059651-2059670 Msa1088690:intron 35.0%
! CTTCCAATAAGGCAAAGTTT+TGG + chr7_3:2059662-2059681 Msa1088690:intron 35.0%
!! TCATTTTTCCCATTTGGATG+GGG - chr7_3:2059706-2059725 Msa1088700:CDS 35.0%
TCACCATGACTGTGATATAT+GGG - chr7_3:2059800-2059819 Msa1088700:CDS 35.0%
TTCACCATGACTGTGATATA+TGG - chr7_3:2059801-2059820 Msa1088700:CDS 35.0%
! TCATGGTGAACCAAAAGTAT+CGG + chr7_3:2059811-2059830 Msa1088690:intron 35.0%
! TGTTTCCATACCGATACTTT+TGG - chr7_3:2059824-2059843 Msa1088700:CDS 35.0%
ATGGAAACATTTATTCCTGC+AGG + chr7_3:2059835-2059854 Msa1088690:intron 35.0%
TATAAAACCATGGTCACCTA+TGG + chr7_3:2059940-2059959 Msa1088690:intron 35.0%
!!! ATTTTTTCCATAGGTGACCA+TGG - chr7_3:2059950-2059969 Msa1088700:intron 35.0%
AAGGTTATTATCCTGTCACA+AGG + chr7_3:2059993-2060012 Msa1088690:intron 35.0%
ATCAACAAAAAAAAGCCACG+TGG - chr7_3:2060161-2060180 Msa1088700:intron 35.0%
! TTGTTGATATTGTGCCATTG+TGG + chr7_3:2060173-2060192 Msa1088690:intron 35.0%
!! TTGGTAACGGAAAATATGTG+AGG + chr7_3:2060295-2060314 Msa1088690:intron 35.0%
ATGTGAGGATGAAAGTTTGA+TGG + chr7_3:2060310-2060329 Msa1088690:intron 35.0%
!! AGTTTGGACAATGGTGTTAT+TGG - chr7_3:2060524-2060543 Msa1088700:CDS 35.0%
TAAAATACGAGAGAAAGCCA+TGG - chr7_3:2060716-2060735 Msa1088700:CDS 35.0%
! GTAAGACAAACATGTGGTTT+TGG - chr7_3:2060903-2060922 Msa1088700:intron 35.0%
GATATGGTAAGACAAACATG+TGG - chr7_3:2060909-2060928 Msa1088700:intron 35.0%
CCTTTCATTCAAAACTTGAC+TGG - chr7_3:2061040-2061059 Msa1088700:CDS 35.0%
!!! CCAGTCAAGTTTTGAATGAA+AGG + chr7_3:2061037-2061056 Msa1088690:intron 35.0%
!!! TCAAGTTTTGAATGAAAGGC+CGG + chr7_3:2061041-2061060 Msa1088690:intron 35.0%
AATCATGTGAGATTGATGTC+CGG - chr7_3:2061063-2061082 Msa1088700:CDS 35.0%
GCCATGATATGATTAGCAAA+TGG - chr7_3:2061108-2061127 Msa1088700:CDS 35.0%
!! CGTTGGATTAGTAAGTTATG+AGG - chr7_3:2061305-2061324 Msa1088700:CDS 35.0%
ATTGCTAAGTGTTTGTTCGT+TGG - chr7_3:2061322-2061341 Msa1088700:CDS 35.0%
AACGAACAAACACTTAGCAA+TGG + chr7_3:2061321-2061340 Msa1088690:intron 35.0%
TTAGCAATGGAATCGAACTT+TGG + chr7_3:2061334-2061353 Msa1088690:intron 35.0%
AATGGAATCGAACTTTGGTT+TGG + chr7_3:2061339-2061358 Msa1088690:intron 35.0%
AATACCAAAAGTGATCATCG+CGG - chr7_3:2061410-2061429 Msa1088700:CDS 35.0%
!! AAGAGTTCAGTTTTATGGGA+AGG - chr7_3:2061436-2061455 Msa1088700:CDS 35.0%
!! AGGCAAGAGTTCAGTTTTAT+GGG - chr7_3:2061440-2061459 Msa1088700:intron 35.0%
! TAGGCAAGAGTTCAGTTTTA+TGG - chr7_3:2061441-2061460 Msa1088700:intron 35.0%
CTAGAATGATACTATGGGTT+TGG - chr7_3:2061515-2061534 Msa1088700:intron 35.0%
TTGTTAGACACAATCATCGT+TGG + chr7_3:2061595-2061614 Msa1088690:intron 35.0%
! AATGACGTGTTAGCATTTTG+TGG - chr7_3:2061915-2061934 Msa1088700:intron 35.0%
CAAAATGCTAACACGTCATT+CGG + chr7_3:2061915-2061934 Msa1088690:intron 35.0%
AAAATGCTAACACGTCATTC+GGG + chr7_3:2061916-2061935 Msa1088690:intron 35.0%
GGAATTCGCTAATATTAGAG+GGG - chr7_3:2062024-2062043 Msa1088700:intron 35.0%
CGGAATTCGCTAATATTAGA+GGG - chr7_3:2062025-2062044 Msa1088700:intron 35.0%
TCGGAATTCGCTAATATTAG+AGG - chr7_3:2062026-2062045 Msa1088700:intron 35.0%
TGTACAGTCAAAACTCATGA+AGG - chr7_3:2062112-2062131 Msa1088700:intron 35.0%
ACAAAATCGATGATATGACG+GGG + chr7_3:2062129-2062148 Msa1088690:intron 35.0%
!! GCATATGTTGTTTCGAATCT+AGG - chr7_3:2062462-2062481 Msa1088700:intron 35.0%
TGTACGAATGAAAAGATCTG+TGG + chr7_3:2062516-2062535 Msa1088690:intron 35.0%
! GGTATCAAATGGTTTGGATT+TGG + chr7_3:2062554-2062573 Msa1088690:intron 35.0%
TATGACTGTAAGAATCCAGA+AGG + chr7_3:2062722-2062741 Msa1088690:intron 35.0%
CATAAGGAACACAACAAGTA+TGG - chr7_3:2062766-2062785 Msa1088700:exon 35.0%
! ACAAAGAGCTTTTGGTGAAA+TGG - chr7_3:2062840-2062859 Msa1088700:five_prime_UTR 35.0%
! TGAAAGGAACAAAGAGCTTT+TGG - chr7_3:2062848-2062867 Msa1088700:five_prime_UTR 35.0%
GAAAAGCTGTGAATTGAGAT+TGG - chr7_3:2063083-2063102 None:intergenic 35.0%
TTGCTGCTGTGTTGTATTTA+GGG + chr7_3:2063265-2063284 Msa1088690:intron 35.0%
TACTGTATGAACACAACACA+TGG - chr7_3:2063501-2063520 None:intergenic 35.0%
ATCCATATTAAGGACCTGAA+TGG + chr7_3:2063573-2063592 Msa1088690:intron 35.0%
TCCATATTAAGGACCTGAAT+GGG + chr7_3:2063574-2063593 Msa1088690:intron 35.0%
ATGATATTATCCACCCATTC+AGG - chr7_3:2063590-2063609 None:intergenic 35.0%
TGCTGTAGTTGCAAAACTTA+GGG - chr7_3:2063786-2063805 None:intergenic 35.0%
! TTTTGCAACTACAGCAGTTT+TGG + chr7_3:2063790-2063809 Msa1088690:intron 35.0%
!!! TGGTGACATTTTGAAGCTTA+CGG - chr7_3:2064046-2064065 None:intergenic 35.0%
!!! TGTTAATGGGATTTTGGGTT+GGG - chr7_3:2064153-2064172 None:intergenic 35.0%
GAAAATTCTCACACGCAAAT+AGG + chr7_3:2064205-2064224 Msa1088690:intron 35.0%
ACTACGTGTATATTATAGGG+TGG - chr7_3:2064411-2064430 None:intergenic 35.0%
TCACAAGCACAAACAAAAAG+TGG + chr7_3:2064595-2064614 Msa1088690:intron 35.0%
AGCACAAACAAAAAGTGGTT+AGG + chr7_3:2064600-2064619 Msa1088690:intron 35.0%
TCTTGTCATGCCTACAAAAT+TGG + chr7_3:2064846-2064865 Msa1088690:intron 35.0%
CTTGTCATGCCTACAAAATT+GGG + chr7_3:2064847-2064866 Msa1088690:intron 35.0%
TTGTCATGCCTACAAAATTG+GGG + chr7_3:2064848-2064867 Msa1088690:intron 35.0%
!!! CAATCTCTTGGTTGCTTTTT+TGG + chr7_3:2065197-2065216 Msa1088690:intron 35.0%
!!! TACGATAATGTTTTTTGCCC+GGG + chr7_3:2065427-2065446 Msa1088690:intron 35.0%
GCTTCTATGACATCATAGTT+GGG - chr7_3:2056629-2056648 None:intergenic 35.0%
AGCTTCTATGACATCATAGT+TGG - chr7_3:2056630-2056649 None:intergenic 35.0%
AACTATGATGTCATAGAAGC+TGG + chr7_3:2056629-2056648 Msa1088690:CDS 35.0%
GACGTTATAATTCGTCTGTT+TGG + chr7_3:2056669-2056688 Msa1088690:CDS 35.0%
! CCCCTTTTGAATACGATAAT+AGG + chr7_3:2066439-2066458 Msa1088690:intron 35.0%
! TACTATCTGGAATTGGTGAA+TGG - chr7_3:2058194-2058213 None:intergenic 35.0%
!! TAAGTGTTTTGGATCTTGGA+AGG + chr7_3:2066726-2066745 Msa1088690:intron 35.0%
TGCCTTAAAATCTTTCCAAG+TGG + chr7_3:2058427-2058446 Msa1088690:three_prime_UTR 35.0%
ATGTTCCCTAAAATTCCACT+TGG - chr7_3:2058445-2058464 None:intergenic 35.0%
CAATATATTTGTCCAACCGA+AGG + chr7_3:2058568-2058587 Msa1088690:three_prime_UTR 35.0%
TTCTCAAATATTGATGTGGC+AGG + chr7_3:2058604-2058623 Msa1088690:three_prime_UTR 35.0%
! GGTTTTCGCCATCATTTATA+TGG + chr7_3:2058625-2058644 Msa1088690:three_prime_UTR 35.0%
GCAGAATCCCATATAAATGA+TGG - chr7_3:2058636-2058655 None:intergenic 35.0%
!! GGAAGCATGAATTGAACTTT+TGG - chr7_3:2058769-2058788 None:intergenic 35.0%
TATCGTGACAAGAAAAAGGA+TGG - chr7_3:2058790-2058809 None:intergenic 35.0%
CACGATAATTAGTTGTTGCA+CGG + chr7_3:2058803-2058822 Msa1088690:intron 35.0%
GACTATGCTCTCTAATTCTT+TGG - chr7_3:2059020-2059039 Msa1088700:three_prime_UTR 35.0%
TAGCATTGCATGAGTATGTT+TGG - chr7_3:2067459-2067478 None:intergenic 35.0%
CAAAGACATCCATACAGAAA+AGG + chr7_3:2067828-2067847 Msa1088690:intron 35.0%
! ACAAGTTCTCCTTTTCTGTA+TGG - chr7_3:2067840-2067859 Msa1088710:three_prime_UTR 35.0%
! AAGTGCTTCAATCTTGTTTC+GGG + chr7_3:2067970-2067989 Msa1088690:intron 35.0%
TCTCAGAGAGTTAAGTTACA+AGG + chr7_3:2059278-2059297 Msa1088690:intron 35.0%
TTGATTAGTACTTGGTTGGT+TGG - chr7_3:2059397-2059416 Msa1088700:three_prime_UTR 35.0%
TTGGTTGATTAGTACTTGGT+TGG - chr7_3:2059401-2059420 Msa1088700:three_prime_UTR 35.0%
GCATTTGGTTGATTAGTACT+TGG - chr7_3:2059405-2059424 Msa1088700:three_prime_UTR 35.0%
GAATAAAACAAGAGAGGGAA+AGG - chr7_3:2059433-2059452 Msa1088700:three_prime_UTR 35.0%
AAGCCGAATAAAACAAGAGA+GGG - chr7_3:2059438-2059457 Msa1088700:three_prime_UTR 35.0%
! TACTACTTTGGCTTCCAATA+AGG + chr7_3:2059651-2059670 Msa1088690:intron 35.0%
! CTTCCAATAAGGCAAAGTTT+TGG + chr7_3:2059662-2059681 Msa1088690:intron 35.0%
!! TCATTTTTCCCATTTGGATG+GGG - chr7_3:2059706-2059725 Msa1088700:CDS 35.0%
TTTAAACCAGAAAGGTTCTC+TGG - chr7_3:2068592-2068611 Msa1088710:CDS 35.0%
TCACCATGACTGTGATATAT+GGG - chr7_3:2059800-2059819 Msa1088700:CDS 35.0%
TTCACCATGACTGTGATATA+TGG - chr7_3:2059801-2059820 Msa1088700:CDS 35.0%
! TCATGGTGAACCAAAAGTAT+CGG + chr7_3:2059811-2059830 Msa1088690:intron 35.0%
! TGTTTCCATACCGATACTTT+TGG - chr7_3:2059824-2059843 Msa1088700:CDS 35.0%
ATGGAAACATTTATTCCTGC+AGG + chr7_3:2059835-2059854 Msa1088690:intron 35.0%
TATAAAACCATGGTCACCTA+TGG + chr7_3:2059940-2059959 Msa1088690:intron 35.0%
!!! ATTTTTTCCATAGGTGACCA+TGG - chr7_3:2059950-2059969 Msa1088700:intron 35.0%
GATGTCATAGAAGCTGGAAA+TGG + chr7_3:2056635-2056654 Msa1088690:CDS 40.0%
CTTGTTGAAGCTACTAGAAC+TGG + chr7_3:2056722-2056741 Msa1088690:CDS 40.0%
! AAGCTACTAGAACTGGTTTC+CGG + chr7_3:2056729-2056748 Msa1088690:CDS 40.0%
GTGTTTGCTTCTAGTGTGAT+TGG + chr7_3:2056888-2056907 Msa1088690:intron 40.0%
GGGAGTTGAAAAATCATGTC+TGG + chr7_3:2056998-2057017 Msa1088690:intron 40.0%
! TCTGAAGTCTTACCAAGTGA+TGG + chr7_3:2057804-2057823 Msa1088690:CDS 40.0%
TCACAAAATGGTCCATCACT+TGG - chr7_3:2057819-2057838 None:intergenic 40.0%
!! GGATTTGCTTGGTTCACTTT+TGG - chr7_3:2057870-2057889 None:intergenic 40.0%
AGGGTCTTCATGTTCAAAGA+TGG + chr7_3:2057901-2057920 Msa1088690:CDS 40.0%
TATGCAGCAGTTAGACAGTT+TGG + chr7_3:2057933-2057952 Msa1088690:CDS 40.0%
CAAAGATACAGATGTTGGTG+CGG + chr7_3:2057965-2057984 Msa1088690:CDS 40.0%
!! TTCAAAAGGGGCATTGTACT+GGG - chr7_3:2058087-2058106 None:intergenic 40.0%
!! ATTCAAAAGGGGCATTGTAC+TGG - chr7_3:2058088-2058107 None:intergenic 40.0%
TAATTGATCATGCCTTCGGT+TGG - chr7_3:2058583-2058602 None:intergenic 40.0%
AATTAGTTGTTGCACGGTCA+TGG + chr7_3:2058809-2058828 Msa1088690:intron 40.0%
ATAAACACGGCACTTTAGCA+GGG - chr7_3:2059191-2059210 Msa1088700:three_prime_UTR 40.0%
AATAAACACGGCACTTTAGC+AGG - chr7_3:2059192-2059211 Msa1088700:three_prime_UTR 40.0%
!! TGCTAAAGTGCCGTGTTTAT+TGG + chr7_3:2059191-2059210 Msa1088690:intron 40.0%
!! AAAGTGCCGTGTTTATTGGT+TGG + chr7_3:2059195-2059214 Msa1088690:intron 40.0%
CAAGCCGAATAAAACAAGAG+AGG - chr7_3:2059439-2059458 Msa1088700:three_prime_UTR 40.0%
TTTCTTTGCAGCCAAAACAC+GGG - chr7_3:2059561-2059580 Msa1088700:CDS 40.0%
CTTTCTTTGCAGCCAAAACA+CGG - chr7_3:2059562-2059581 Msa1088700:CDS 40.0%
TGCAAAGAAAGGATAGCAGT+GGG + chr7_3:2059571-2059590 Msa1088690:intron 40.0%
CATGCTTATAGTCTGCAGAA+AGG + chr7_3:2059596-2059615 Msa1088690:intron 40.0%
TGGCCAAAACTTTGCCTTAT+TGG - chr7_3:2059668-2059687 Msa1088700:CDS 40.0%
! TTTTGGCCAATGCATGTTCT+AGG + chr7_3:2059679-2059698 Msa1088690:intron 40.0%
GGAATTGCAAAGGCTACAAA+AGG - chr7_3:2059736-2059755 Msa1088700:CDS 40.0%
GTTCTATGGAGGAATTGCAA+AGG - chr7_3:2059746-2059765 Msa1088700:CDS 40.0%
ATTCCTCCATAGAACCTTTC+TGG + chr7_3:2059751-2059770 Msa1088690:intron 40.0%
AAACCAGAAAGGTTCTATGG+AGG - chr7_3:2059757-2059776 Msa1088700:CDS 40.0%
CACCATGACTGTGATATATG+GGG - chr7_3:2059799-2059818 Msa1088700:CDS 40.0%
!! GTGAACCAAAAGTATCGGTA+TGG + chr7_3:2059816-2059835 Msa1088690:intron 40.0%
TTATTCCTGCAGGTAGTGAT+AGG + chr7_3:2059845-2059864 Msa1088690:intron 40.0%
GCTCGAACTAAGAAAACTGT+CGG + chr7_3:2059895-2059914 Msa1088690:intron 40.0%
CAGGACCTCATATAAAACCA+TGG + chr7_3:2059930-2059949 Msa1088690:intron 40.0%
!!! GGTGACCATGGTTTTATATG+AGG - chr7_3:2059938-2059957 Msa1088700:intron 40.0%
TATACATGGTAAGTACCACG+TGG + chr7_3:2060143-2060162 Msa1088690:intron 40.0%
! TATTGGCTAGGTTTCCTGAA+TGG - chr7_3:2060507-2060526 Msa1088700:CDS 40.0%
CCACTGCATCTTTGTTAGTT+TGG - chr7_3:2060540-2060559 Msa1088700:CDS 40.0%
CCAAACTAACAAAGATGCAG+TGG + chr7_3:2060537-2060556 Msa1088690:intron 40.0%
TGCAAGCAATTCTACATTGC+AGG - chr7_3:2060571-2060590 Msa1088700:CDS 40.0%
CATGAAAAGAGTAAGACAGC+TGG - chr7_3:2060622-2060641 Msa1088700:CDS 40.0%
AAGTTCCAACAAGAGGATGA+GGG - chr7_3:2060779-2060798 Msa1088700:CDS 40.0%
ATCCTCTTGTTGGAACTTGT+AGG + chr7_3:2060781-2060800 Msa1088690:intron 40.0%
TACCTACAAGTTCCAACAAG+AGG - chr7_3:2060786-2060805 Msa1088700:CDS 40.0%
ATACACGCAGTCCAATGATA+TGG - chr7_3:2060925-2060944 Msa1088700:CDS 40.0%
!! GCGATTTCTAGAACAGCATT+TGG - chr7_3:2061013-2061032 Msa1088700:CDS 40.0%
! TGGCTGCTTTGAATAAATGC+CGG + chr7_3:2061124-2061143 Msa1088690:intron 40.0%
AAGTTATGAGGGTGACGAAT+GGG - chr7_3:2061293-2061312 Msa1088700:CDS 40.0%
TAAGTTATGAGGGTGACGAA+TGG - chr7_3:2061294-2061313 Msa1088700:CDS 40.0%
AAATGCTAAACCTAGGAGTC+TGG - chr7_3:2061747-2061766 Msa1088700:intron 40.0%
GATCCTCTACATCAATTGCA+CGG + chr7_3:2061821-2061840 Msa1088690:intron 40.0%
CAAAATCGATGATATGACGG+GGG + chr7_3:2062130-2062149 Msa1088690:intron 40.0%
! TACCGTATTTTCGGACAGTT+TGG + chr7_3:2062493-2062512 Msa1088690:intron 40.0%
CACCAAACTGTCCGAAAATA+CGG - chr7_3:2062498-2062517 Msa1088700:CDS 40.0%
!! ACATCGTTGGAGGTATCAAA+TGG + chr7_3:2062543-2062562 Msa1088690:intron 40.0%
!! GTTGGAGGTATCAAATGGTT+TGG + chr7_3:2062548-2062567 Msa1088690:intron 40.0%
! GAAAAGCTTCTAAGAGCACA+AGG - chr7_3:2062636-2062655 Msa1088700:CDS 40.0%
! AGAAGCTTTTCCAACCTCTT+TGG + chr7_3:2062645-2062664 Msa1088690:intron 40.0%
AAGGAACACAACAAGTATGG+AGG - chr7_3:2062763-2062782 Msa1088700:exon 40.0%
! ATGATGGAGAAGACGTATTG+TGG + chr7_3:2062805-2062824 Msa1088690:intron 40.0%
! CACAGCTTTTCCGTAAAACA+TGG + chr7_3:2063092-2063111 Msa1088690:intron 40.0%
!! ATCCAAGAGAGTGCCTAAAT+AGG + chr7_3:2063164-2063183 Msa1088690:intron 40.0%
AGTGCCTAAATAGGAGATGA+AGG + chr7_3:2063173-2063192 Msa1088690:intron 40.0%
GTGCCTAAATAGGAGATGAA+GGG + chr7_3:2063174-2063193 Msa1088690:intron 40.0%
!!! CTGTTTTTTGGATCTGCCAA+GGG + chr7_3:2063199-2063218 Msa1088690:intron 40.0%
!!! TGTTTTTTGGATCTGCCAAG+GGG + chr7_3:2063200-2063219 Msa1088690:intron 40.0%
GTTGCTGCTGTGTTGTATTT+AGG + chr7_3:2063264-2063283 Msa1088690:intron 40.0%
AAAGCATGCGCAGTACAAAT+GGG - chr7_3:2063339-2063358 None:intergenic 40.0%
! AAAAGCATGCGCAGTACAAA+TGG - chr7_3:2063340-2063359 None:intergenic 40.0%
! CAAGCACAAGAAGTGCAAAA+TGG - chr7_3:2063431-2063450 None:intergenic 40.0%
! CATTTTGCACTTCTTGTGCT+TGG + chr7_3:2063429-2063448 Msa1088690:intron 40.0%
ACCCATTCAGGTCCTTAATA+TGG - chr7_3:2063578-2063597 None:intergenic 40.0%
ATATTAAGGACCTGAATGGG+TGG + chr7_3:2063577-2063596 Msa1088690:intron 40.0%
TCGCAACTTCGTGAAAGTTA+GGG - chr7_3:2063727-2063746 None:intergenic 40.0%
ATCGCAACTTCGTGAAAGTT+AGG - chr7_3:2063728-2063747 None:intergenic 40.0%
! CTTTCACGAAGTTGCGATTT+TGG + chr7_3:2063730-2063749 Msa1088690:intron 40.0%
CTGTAGTTGCAAAACTTAGG+GGG - chr7_3:2063784-2063803 None:intergenic 40.0%
GCTGTAGTTGCAAAACTTAG+GGG - chr7_3:2063785-2063804 None:intergenic 40.0%
CTGCTGTAGTTGCAAAACTT+AGG - chr7_3:2063787-2063806 None:intergenic 40.0%
AAAAATTATCGATCGAGCCC+GGG - chr7_3:2064120-2064139 None:intergenic 40.0%
CAAAAATTATCGATCGAGCC+CGG - chr7_3:2064121-2064140 None:intergenic 40.0%
!! GTGTTAATGGGATTTTGGGT+TGG - chr7_3:2064154-2064173 None:intergenic 40.0%
GTTTGGACACACTCACATAA+AGG - chr7_3:2064705-2064724 None:intergenic 40.0%
CAAGGAAATTTATTGAGCCC+GGG - chr7_3:2065447-2065466 None:intergenic 40.0%
GCAAGGAAATTTATTGAGCC+CGG - chr7_3:2065448-2065467 None:intergenic 40.0%
GATGTCATAGAAGCTGGAAA+TGG + chr7_3:2056635-2056654 Msa1088690:CDS 40.0%
CTTGTTGAAGCTACTAGAAC+TGG + chr7_3:2056722-2056741 Msa1088690:CDS 40.0%
! AAGCTACTAGAACTGGTTTC+CGG + chr7_3:2056729-2056748 Msa1088690:CDS 40.0%
GTGTTTGCTTCTAGTGTGAT+TGG + chr7_3:2056888-2056907 Msa1088690:intron 40.0%
GGGAGTTGAAAAATCATGTC+TGG + chr7_3:2056998-2057017 Msa1088690:intron 40.0%
!! TACAAGTGTTGGTGTCATGT+CGG + chr7_3:2066220-2066239 Msa1088690:intron 40.0%
TAATTGATCATGCCTTCGGT+TGG - chr7_3:2058583-2058602 None:intergenic 40.0%
AATTAGTTGTTGCACGGTCA+TGG + chr7_3:2058809-2058828 Msa1088690:intron 40.0%
AATTCTCGTGGACACAAACA+CGG - chr7_3:2067580-2067599 None:intergenic 40.0%
TGTTTGTGTCCACGAGAATT+TGG + chr7_3:2067580-2067599 Msa1088690:intron 40.0%
TAGAAAGATGCTCTCTGCTA+GGG - chr7_3:2067802-2067821 Msa1088710:three_prime_UTR 40.0%
!! TAGCAGAGAGCATCTTTCTA+GGG + chr7_3:2067802-2067821 Msa1088690:intron 40.0%
TGCATCTGATACCAGCTTAT+TGG + chr7_3:2068023-2068042 Msa1088690:intron 40.0%
TCTGATACCAGCTTATTGGT+TGG + chr7_3:2068027-2068046 Msa1088690:intron 40.0%
CAAGCCGAATAAAACAAGAG+AGG - chr7_3:2059439-2059458 Msa1088700:three_prime_UTR 40.0%
TTTCTTTGCAGCCAAAACAC+GGG - chr7_3:2059561-2059580 Msa1088700:CDS 40.0%
CTTTCTTTGCAGCCAAAACA+CGG - chr7_3:2059562-2059581 Msa1088700:CDS 40.0%
TGCAAAGAAAGGATAGCAGT+GGG + chr7_3:2059571-2059590 Msa1088690:intron 40.0%
CATGCTTATAGTCTGCAGAA+AGG + chr7_3:2059596-2059615 Msa1088690:intron 40.0%
TGGCCAAAACTTTGCCTTAT+TGG - chr7_3:2059668-2059687 Msa1088700:CDS 40.0%
! TTTTGGCCAATGCATGTTCT+AGG + chr7_3:2059679-2059698 Msa1088690:intron 40.0%
CACCATGACTGTGATATATG+GGG - chr7_3:2059799-2059818 Msa1088700:CDS 40.0%
!! GTGAACCAAAAGTATCGGTA+TGG + chr7_3:2059816-2059835 Msa1088690:intron 40.0%
TTATTCCTGCAGGTAGTGAT+AGG + chr7_3:2059845-2059864 Msa1088690:intron 40.0%
GCTCGAACTAAGAAAACTGT+TGG + chr7_3:2059895-2059914 Msa1088690:intron 40.0%
CGAACTAAGAAAACTGTTGG+TGG + chr7_3:2068730-2068749 Msa1088690:three_prime_UTR 40.0%
! CTGTTGGTGGATATAATCTC+AGG + chr7_3:2068743-2068762 Msa1088690:three_prime_UTR 40.0%
CAGGACCTCATATAAAACCA+TGG + chr7_3:2059930-2059949 Msa1088690:intron 40.0%
!!! GGTGACCATGGTTTTATATG+AGG - chr7_3:2059938-2059957 Msa1088700:intron 40.0%
AACTCCAAGCATGCAATCCA+TGG + chr7_3:2056496-2056515 Msa1088690:exon 45.0%
! ATGTCTGGAGCTATGAAGCA+CGG + chr7_3:2057013-2057032 Msa1088690:intron 45.0%
ACTCTTCCCACTGTTTACGT+TGG + chr7_3:2057297-2057316 Msa1088690:intron 45.0%
CTCTTCCCACTGTTTACGTT+GGG + chr7_3:2057298-2057317 Msa1088690:intron 45.0%
CACTTCCCAACGTAAACAGT+GGG - chr7_3:2057306-2057325 None:intergenic 45.0%
ACACTTCCCAACGTAAACAG+TGG - chr7_3:2057307-2057326 None:intergenic 45.0%
! TGTGTGTTTGGTTTCACGGT+GGG - chr7_3:2057593-2057612 None:intergenic 45.0%
TGAACATGAAGACCCTTTGC+AGG - chr7_3:2057897-2057916 None:intergenic 45.0%
ACAGTATTGCCGGTACTAAG+TGG + chr7_3:2058006-2058025 Msa1088690:CDS 45.0%
AGCAGAAGACCACTTAGTAC+CGG - chr7_3:2058018-2058037 None:intergenic 45.0%
ATTGAACAAAGCCGTAGAGC+TGG + chr7_3:2058038-2058057 Msa1088690:CDS 45.0%
TCACACTTGGTACCATTGGT+GGG - chr7_3:2058472-2058491 None:intergenic 45.0%
! CGATGACAAGGAGAAAGTGT+AGG - chr7_3:2058522-2058541 None:intergenic 45.0%
TATGGGATTCTGCTTTGTCG+CGG + chr7_3:2058643-2058662 Msa1088690:three_prime_UTR 45.0%
!!! CTTTTGGAACGAGCGTATGA+AGG - chr7_3:2058753-2058772 None:intergenic 45.0%
! TTGGTTGGTTGGTCAAGACT+AGG - chr7_3:2059386-2059405 Msa1088700:three_prime_UTR 45.0%
AACAAGAGAGGGAAAGGGAT+TGG - chr7_3:2059427-2059446 Msa1088700:three_prime_UTR 45.0%
TTCTTTGCAGCCAAAACACG+GGG - chr7_3:2059560-2059579 Msa1088700:CDS 45.0%
!!! CGTGTTTTGGCTGCAAAGAA+AGG + chr7_3:2059560-2059579 Msa1088690:intron 45.0%
CTGCAAAGAAAGGATAGCAG+TGG + chr7_3:2059570-2059589 Msa1088690:intron 45.0%
!! TTCTAGGACCCCATCCAAAT+GGG + chr7_3:2059695-2059714 Msa1088690:intron 45.0%
CACCCCATATATCACAGTCA+TGG + chr7_3:2059794-2059813 Msa1088690:intron 45.0%
CGAACTAAGAAAACTGTCGG+TGG + chr7_3:2059898-2059917 Msa1088690:intron 45.0%
CTGTCGGTGGATATAATCTC+AGG + chr7_3:2059911-2059930 Msa1088690:intron 45.0%
CACATGTGTATCCTTGTGAC+AGG - chr7_3:2060007-2060026 Msa1088700:intron 45.0%
!! GGACAATGGTGTTATTGGCT+AGG - chr7_3:2060519-2060538 Msa1088700:CDS 45.0%
GATTTCCCTCATCCTCTTGT+TGG + chr7_3:2060771-2060790 Msa1088690:intron 45.0%
CAAGTTCCAACAAGAGGATG+AGG - chr7_3:2060780-2060799 Msa1088700:CDS 45.0%
! AGTGGTTTGCAACTCTTTCG+AGG + chr7_3:2061562-2061581 Msa1088690:intron 45.0%
CTAGACGAACATGACATGGT+TGG - chr7_3:2061685-2061704 Msa1088700:intron 45.0%
GCAACTAGACGAACATGACA+TGG - chr7_3:2061689-2061708 Msa1088700:intron 45.0%
GACTTTCAAGCAACCACACT+TGG - chr7_3:2061711-2061730 Msa1088700:intron 45.0%
GGAGTCTGGATTTCGAAACA+AGG - chr7_3:2061733-2061752 Msa1088700:intron 45.0%
GTTTCGAAATCCAGACTCCT+AGG + chr7_3:2061734-2061753 Msa1088690:intron 45.0%
TTGCCGTGCAATTGATGTAG+AGG - chr7_3:2061827-2061846 Msa1088700:intron 45.0%
TAACACGTCATTCGGGAAAC+TGG + chr7_3:2061923-2061942 Msa1088690:intron 45.0%
! CTAAGAGCACAAGGTCTTCA+AGG - chr7_3:2062627-2062646 Msa1088700:CDS 45.0%
ACCACAAGGAATTCAGCTTC+TGG + chr7_3:2062673-2062692 Msa1088690:intron 45.0%
TCCAGAAGCTGAATTCCTTG+TGG - chr7_3:2062677-2062696 Msa1088700:CDS 45.0%
GTAAGAATCCAGAAGGTAGC+TGG + chr7_3:2062729-2062748 Msa1088690:intron 45.0%
CTCCTATTTAGGCACTCTCT+TGG - chr7_3:2063169-2063188 None:intergenic 45.0%
!!! AGATGAAGGGCGCTGTTTTT+TGG + chr7_3:2063187-2063206 Msa1088690:intron 45.0%
!!! GCTGTTTTTTGGATCTGCCA+AGG + chr7_3:2063198-2063217 Msa1088690:intron 45.0%
CTGCTGTGTTGTATTTAGGG+AGG + chr7_3:2063268-2063287 Msa1088690:intron 45.0%
TAACAAAGCGCAGCAGCAAA+GGG - chr7_3:2063374-2063393 None:intergenic 45.0%
! TGCGCTTTGTTACAGTTTGC+AGG + chr7_3:2063382-2063401 Msa1088690:intron 45.0%
! GCGCTTTGTTACAGTTTGCA+GGG + chr7_3:2063383-2063402 Msa1088690:intron 45.0%
CTTTGTTACAGTTTGCAGGG+TGG + chr7_3:2063386-2063405 Msa1088690:intron 45.0%
GCAACTTCGTGAAAGTTAGG+GGG - chr7_3:2063725-2063744 None:intergenic 45.0%
CGCAACTTCGTGAAAGTTAG+GGG - chr7_3:2063726-2063745 None:intergenic 45.0%
TAGTTGCAAAACTTAGGGGG+CGG - chr7_3:2063781-2063800 None:intergenic 45.0%
TAACTTGGTCTACGTTGACG+TGG - chr7_3:2063856-2063875 None:intergenic 45.0%
TTCTCACACGCAAATAGGCT+CGG + chr7_3:2064210-2064229 Msa1088690:intron 45.0%
CTTGTGAGTATACGCTTACG+CGG + chr7_3:2064883-2064902 Msa1088690:intron 45.0%
TGGACTTCGCGCATATTACA+AGG + chr7_3:2065217-2065236 Msa1088690:intron 45.0%
TATAGTATACACGTCTCCGC+TGG - chr7_3:2065475-2065494 None:intergenic 45.0%
AACTCCAAGCATGCAATCCA+TGG + chr7_3:2056496-2056515 Msa1088690:exon 45.0%
! ATGTCTGGAGCTATGAAGCA+CGG + chr7_3:2057013-2057032 Msa1088690:intron 45.0%
CAAATCCACCAAACTGTCCT+CGG - chr7_3:2066287-2066306 None:intergenic 45.0%
ACAGTATTGCCGGTACTAAG+TGG + chr7_3:2058006-2058025 Msa1088690:CDS 45.0%
AGCAGAAGACCACTTAGTAC+CGG - chr7_3:2058018-2058037 None:intergenic 45.0%
! CGATGACAAGGAGAAAGTGT+AGG - chr7_3:2058522-2058541 None:intergenic 45.0%
TATGGGATTCTGCTTTGTCG+CGG + chr7_3:2058643-2058662 Msa1088690:three_prime_UTR 45.0%
!!! CTTTTGGAACGAGCGTATGA+AGG - chr7_3:2058753-2058772 None:intergenic 45.0%
ACAAACACGGCACTTTAGCA+GGG - chr7_3:2067567-2067586 None:intergenic 45.0%
GTCCACGAGAATTTGGAAGT+AGG + chr7_3:2067587-2067606 Msa1088690:intron 45.0%
CACCTACTTCCAAATTCTCG+TGG - chr7_3:2067592-2067611 None:intergenic 45.0%
CCACCGAAACAGTGTAAACA+CGG + chr7_3:2067637-2067656 Msa1088690:intron 45.0%
CAGCCGTGTTTACACTGTTT+CGG - chr7_3:2067643-2067662 Msa1088710:three_prime_UTR 45.0%
AGGTCACTATCACAGAGATG+AGG + chr7_3:2067707-2067726 Msa1088690:intron 45.0%
ACTATCACAGAGATGAGGTG+AGG + chr7_3:2067712-2067731 Msa1088690:intron 45.0%
TGATCAGCTGTTAGTTGCTC+TGG - chr7_3:2067751-2067770 Msa1088710:three_prime_UTR 45.0%
CTAGAAAGATGCTCTCTGCT+AGG - chr7_3:2067803-2067822 Msa1088710:three_prime_UTR 45.0%
!! CTAGCAGAGAGCATCTTTCT+AGG + chr7_3:2067801-2067820 Msa1088690:intron 45.0%
!! AGCAGAGAGCATCTTTCTAG+GGG + chr7_3:2067803-2067822 Msa1088690:intron 45.0%
GCAAATGCCAACCAATAAGC+TGG - chr7_3:2068037-2068056 Msa1088710:three_prime_UTR 45.0%
! TTGGTTGGTTGGTCAAGACT+AGG - chr7_3:2059386-2059405 Msa1088700:three_prime_UTR 45.0%
AACAAGAGAGGGAAAGGGAT+TGG - chr7_3:2059427-2059446 Msa1088700:three_prime_UTR 45.0%
TTCTTTGCAGCCAAAACACG+GGG - chr7_3:2059560-2059579 Msa1088700:CDS 45.0%
!!! CGTGTTTTGGCTGCAAAGAA+AGG + chr7_3:2059560-2059579 Msa1088690:intron 45.0%
CTGCAAAGAAAGGATAGCAG+TGG + chr7_3:2059570-2059589 Msa1088690:intron 45.0%
!! TTCTAGGACCCCATCCAAAT+GGG + chr7_3:2059695-2059714 Msa1088690:intron 45.0%
GGAATTGCAAAGGCCACAAA+AGG - chr7_3:2068568-2068587 Msa1088710:CDS 45.0%
! GTTCTCTGGAGGAATTGCAA+AGG - chr7_3:2068578-2068597 Msa1088710:CDS 45.0%
ATTCCTCCAGAGAACCTTTC+TGG + chr7_3:2068583-2068602 Msa1088690:three_prime_UTR 45.0%
AAACCAGAAAGGTTCTCTGG+AGG - chr7_3:2068589-2068608 Msa1088710:CDS 45.0%
CACCCCATATATCACAGTCA+TGG + chr7_3:2059794-2059813 Msa1088690:intron 45.0%
!! AAAAAAAAATTATTTATCAT+TGG - chr7_3:2067189-2067208 None:intergenic 5.0%
! ACAGCCATGGATTGCATGCT+TGG - chr7_3:2056503-2056522 None:intergenic 50.0%
!! TGTTGTGCTGGTTACAGCCA+TGG - chr7_3:2056516-2056535 None:intergenic 50.0%
TGGCTGTAACCAGCACAACA+TGG + chr7_3:2056516-2056535 Msa1088690:CDS 50.0%
TGAGAGCTTCCATGTTGTGC+TGG - chr7_3:2056528-2056547 None:intergenic 50.0%
GGACACTCTATGCGTTTGCA+TGG - chr7_3:2056608-2056627 None:intergenic 50.0%
! CTACTAGAACTGGTTTCCGG+AGG + chr7_3:2056732-2056751 Msa1088690:CDS 50.0%
GCTGGGATACGTCTAATTCG+AGG + chr7_3:2057158-2057177 Msa1088690:intron 50.0%
!! GAGGAGTGTCTGTGCTTCAT+AGG + chr7_3:2057177-2057196 Msa1088690:intron 50.0%
GTGTCTGTGCTTCATAGGTC+TGG + chr7_3:2057182-2057201 Msa1088690:intron 50.0%
TCTGTGCTTCATAGGTCTGG+AGG + chr7_3:2057185-2057204 Msa1088690:intron 50.0%
! GTGTGTGTTTGGTTTCACGG+TGG - chr7_3:2057594-2057613 None:intergenic 50.0%
! GGTAAGACTTCAGAGAGCAC+AGG - chr7_3:2057798-2057817 None:intergenic 50.0%
!! TTGCAGGTGGTGGATTTGCT+TGG - chr7_3:2057881-2057900 None:intergenic 50.0%
AGCAAATCCACCACCTGCAA+AGG + chr7_3:2057881-2057900 Msa1088690:CDS 50.0%
GCAAATCCACCACCTGCAAA+GGG + chr7_3:2057882-2057901 Msa1088690:CDS 50.0%
ACATGAAGACCCTTTGCAGG+TGG - chr7_3:2057894-2057913 None:intergenic 50.0%
GCAGCAGTTAGACAGTTTGG+TGG + chr7_3:2057936-2057955 Msa1088690:CDS 50.0%
GCGTTGAAGGACAGTATTGC+CGG + chr7_3:2057996-2058015 Msa1088690:CDS 50.0%
CTGAAGCATGACCAGCTCTA+CGG - chr7_3:2058052-2058071 None:intergenic 50.0%
CTCACACTTGGTACCATTGG+TGG - chr7_3:2058473-2058492 None:intergenic 50.0%
AGGCTCACACTTGGTACCAT+TGG - chr7_3:2058476-2058495 None:intergenic 50.0%
TGGAAGGAAAGGCTCACACT+TGG - chr7_3:2058485-2058504 None:intergenic 50.0%
CCATGGTTGCTTGGAAGGAA+AGG - chr7_3:2058496-2058515 None:intergenic 50.0%
CCTTTCCTTCCAAGCAACCA+TGG + chr7_3:2058493-2058512 Msa1088690:three_prime_UTR 50.0%
TGTAGGTTGCCATGGTTGCT+TGG - chr7_3:2058505-2058524 None:intergenic 50.0%
! GGAGAAAGTGTAGGTTGCCA+TGG - chr7_3:2058513-2058532 None:intergenic 50.0%
! ACTTTAGCAGGGTTCTGGCA+GGG - chr7_3:2059180-2059199 Msa1088700:three_prime_UTR 50.0%
! GAGGGAAAGGGATTGGCATT+TGG - chr7_3:2059420-2059439 Msa1088700:three_prime_UTR 50.0%
TGGGGTCCTAGAACATGCAT+TGG - chr7_3:2059688-2059707 Msa1088700:CDS 50.0%
!! GTTCTAGGACCCCATCCAAA+TGG + chr7_3:2059694-2059713 Msa1088690:intron 50.0%
GGAAACCTATCACTACCTGC+AGG - chr7_3:2059853-2059872 Msa1088700:CDS 50.0%
CTGAATGGCAAGAACGTGCA+AGG - chr7_3:2060492-2060511 Msa1088700:CDS 50.0%
CTTGCACGTTCTTGCCATTC+AGG + chr7_3:2060490-2060509 Msa1088690:intron 50.0%
GATGGCTTCTCCATTGTCCA+TGG + chr7_3:2060696-2060715 Msa1088690:intron 50.0%
CGAGAGAAAGCCATGGACAA+TGG - chr7_3:2060709-2060728 Msa1088700:CDS 50.0%
TTGGCAGCAGCTATGTAGCA+GGG - chr7_3:2060994-2061013 Msa1088700:CDS 50.0%
TTTGGCAGCAGCTATGTAGC+AGG - chr7_3:2060995-2061014 Msa1088700:CDS 50.0%
GTTCGTCTAGTTGCCAAGTG+TGG + chr7_3:2061695-2061714 Msa1088690:intron 50.0%
ATTCGGGAAACTGGTCGTGA+AGG + chr7_3:2061932-2061951 Msa1088690:intron 50.0%
GTGGTTGAGACCAAAGAGGT+TGG - chr7_3:2062658-2062677 Msa1088700:CDS 50.0%
CCTTGTGGTTGAGACCAAAG+AGG - chr7_3:2062662-2062681 Msa1088700:CDS 50.0%
CCTCTTTGGTCTCAACCACA+AGG + chr7_3:2062659-2062678 Msa1088690:intron 50.0%
! AGCTTCTGGAAAGCCCATAG+AGG + chr7_3:2062687-2062706 Msa1088690:intron 50.0%
CACTTTCACCAGCTACCTTC+TGG - chr7_3:2062740-2062759 Msa1088700:CDS 50.0%
GCGCCCTTCATCTCCTATTT+AGG - chr7_3:2063180-2063199 None:intergenic 50.0%
! TTTTGGATCTGCCAAGGGGT+TGG + chr7_3:2063204-2063223 Msa1088690:intron 50.0%
GATCCTAACAACCAACCCCT+TGG - chr7_3:2063218-2063237 None:intergenic 50.0%
! GGTTGGTTGTTAGGATCCCT+CGG + chr7_3:2063221-2063240 Msa1088690:intron 50.0%
GGCTGTTTAGAGGCAAGCTT+TGG + chr7_3:2063242-2063261 Msa1088690:intron 50.0%
GTAACAAAGCGCAGCAGCAA+AGG - chr7_3:2063375-2063394 None:intergenic 50.0%
!! TACAGCAGTTTTGGCCCTCA+AGG + chr7_3:2063799-2063818 Msa1088690:intron 50.0%
AAATTTCCTTGCTCCGCCAG+CGG + chr7_3:2065456-2065475 Msa1088690:intron 50.0%
! ACAGCCATGGATTGCATGCT+TGG - chr7_3:2056503-2056522 None:intergenic 50.0%
TGTTGTGGTGGTTACAGCCA+TGG - chr7_3:2065613-2065632 None:intergenic 50.0%
TGGCTGTAACCACCACAACA+TGG + chr7_3:2065613-2065632 Msa1088690:intron 50.0%
TGAGAGCTTCCATGTTGTGG+TGG - chr7_3:2065625-2065644 None:intergenic 50.0%
CAGTGAGAGCTTCCATGTTG+TGG - chr7_3:2056531-2056550 None:intergenic 50.0%
! CTACTAGAACTGGTTTCCGG+AGG + chr7_3:2056732-2056751 Msa1088690:CDS 50.0%
ATACGACACGTGTTCGACAC+TGG + chr7_3:2066249-2066268 Msa1088690:intron 50.0%
TACGACACGTGTTCGACACT+GGG + chr7_3:2066250-2066269 Msa1088690:intron 50.0%
! TGAGCTAGCATCAGCGTTGA+AGG + chr7_3:2066326-2066345 Msa1088690:intron 50.0%
GCGTTGAAGGACAGTATTGC+CGG + chr7_3:2057996-2058015 Msa1088690:CDS 50.0%
CTGAAGCATGACCAGCTCTA+TGG - chr7_3:2058052-2058071 None:intergenic 50.0%
TCGCACTTGGTACCATTGGT+GGG - chr7_3:2066815-2066834 None:intergenic 50.0%
CCATGGTTGCTTGGAAGGAA+AGG - chr7_3:2058496-2058515 None:intergenic 50.0%
CCTTTCCTTCCAAGCAACCA+TGG + chr7_3:2058493-2058512 Msa1088690:three_prime_UTR 50.0%
TGTAGGTTGCCATGGTTGCT+TGG - chr7_3:2058505-2058524 None:intergenic 50.0%
! GGAGAAAGTGTAGGTTGCCA+TGG - chr7_3:2058513-2058532 None:intergenic 50.0%
! ACTTTAGCAGGGTTCTGGCA+GGG - chr7_3:2059180-2059199 Msa1088700:three_prime_UTR 50.0%
CACAAACACGGCACTTTAGC+AGG - chr7_3:2067568-2067587 None:intergenic 50.0%
!! CTGTTTCGGTGGTGTTACGA+AGG - chr7_3:2067629-2067648 Msa1088710:three_prime_UTR 50.0%
CCGTGTTTACACTGTTTCGG+TGG - chr7_3:2067640-2067659 Msa1088710:three_prime_UTR 50.0%
ATCACAGAGATGAGGTGAGG+AGG + chr7_3:2067715-2067734 Msa1088690:intron 50.0%
CAACTAACAGCTGATCAGCC+AGG + chr7_3:2067754-2067773 Msa1088690:intron 50.0%
TGATCAGCCAGGAAACCCTA+GGG + chr7_3:2067765-2067784 Msa1088690:intron 50.0%
! GAGGGAAAGGGATTGGCATT+TGG - chr7_3:2059420-2059439 Msa1088700:three_prime_UTR 50.0%
TGGGGTCCTAGAACATGCAT+TGG - chr7_3:2059688-2059707 Msa1088700:CDS 50.0%
!! GTTCTAGGACCCCATCCAAA+TGG + chr7_3:2059694-2059713 Msa1088690:intron 50.0%
GGAAACCTATCACTACCTGC+AGG - chr7_3:2059853-2059872 Msa1088700:CDS 50.0%
GGAGCTATGAAGCACGGATG+CGG + chr7_3:2057019-2057038 Msa1088690:intron 55.0%
CACGAACACCGAACACGACA+CGG + chr7_3:2057043-2057062 Msa1088690:intron 55.0%
TGAAGACCCTTTGCAGGTGG+TGG - chr7_3:2057891-2057910 None:intergenic 55.0%
GGGAACATCAGTCCCACCAA+TGG + chr7_3:2058457-2058476 Msa1088690:three_prime_UTR 55.0%
GGTTGCCATGGTTGCTTGGA+AGG - chr7_3:2058501-2058520 None:intergenic 55.0%
! CACTTTAGCAGGGTTCTGGC+AGG - chr7_3:2059181-2059200 Msa1088700:three_prime_UTR 55.0%
ACGGCACTTTAGCAGGGTTC+TGG - chr7_3:2059185-2059204 Msa1088700:three_prime_UTR 55.0%
! CGGATCTTAGCCCCGTGTTT+TGG + chr7_3:2059547-2059566 Msa1088690:intron 55.0%
! GGGTCCGCGATGATCACTTT+TGG + chr7_3:2061403-2061422 Msa1088690:intron 55.0%
GATCTGTGGCGCAACATCGT+TGG + chr7_3:2062530-2062549 Msa1088690:intron 55.0%
!! CTGCCAAGGGGTTGGTTGTT+AGG + chr7_3:2063212-2063231 Msa1088690:intron 55.0%
AGGATCCCTCGGCTGTTTAG+AGG + chr7_3:2063232-2063251 Msa1088690:intron 55.0%
GCTTGCCTCTAAACAGCCGA+GGG - chr7_3:2063240-2063259 None:intergenic 55.0%
AGCTTGCCTCTAAACAGCCG+AGG - chr7_3:2063241-2063260 None:intergenic 55.0%
GCATGCGCAGTACAAATGGG+AGG - chr7_3:2063336-2063355 None:intergenic 55.0%
TGCACGTCTCTGCTTGTGCT+TGG - chr7_3:2064066-2064085 None:intergenic 55.0%
AAGCACAAGCAGAGACGTGC+AGG + chr7_3:2064065-2064084 Msa1088690:intron 55.0%
AGCACAAGCAGAGACGTGCA+GGG + chr7_3:2064066-2064085 Msa1088690:intron 55.0%
AGTATACACGTCTCCGCTGG+CGG - chr7_3:2065472-2065491 None:intergenic 55.0%
GGAGCTATGAAGCACGGATG+CGG + chr7_3:2057019-2057038 Msa1088690:intron 55.0%
ATGAAGCACGGATGCGGACA+CGG + chr7_3:2057025-2057044 Msa1088690:intron 55.0%
CACCAAACTGTCCTCGGATC+AGG - chr7_3:2066281-2066300 None:intergenic 55.0%
CTGATCCGAGGACAGTTTGG+TGG + chr7_3:2066279-2066298 Msa1088690:intron 55.0%
GGGAACATCAGTCCCACCAA+TGG + chr7_3:2058457-2058476 Msa1088690:three_prime_UTR 55.0%
CTCGCACTTGGTACCATTGG+TGG - chr7_3:2066816-2066835 None:intergenic 55.0%
AGGCTCGCACTTGGTACCAT+TGG - chr7_3:2066819-2066838 None:intergenic 55.0%
TGGAAGGAAAGGCTCGCACT+TGG - chr7_3:2066828-2066847 None:intergenic 55.0%
GGTTGCCATGGTTGCTTGGA+AGG - chr7_3:2058501-2058520 None:intergenic 55.0%
! CACTTTAGCAGGGTTCTGGC+AGG - chr7_3:2059181-2059200 Msa1088700:three_prime_UTR 55.0%
ACGGCACTTTAGCAGGGTTC+TGG - chr7_3:2059185-2059204 Msa1088700:three_prime_UTR 55.0%
CTGATCAGCCAGGAAACCCT+AGG + chr7_3:2067764-2067783 Msa1088690:intron 55.0%
GATCAGCCAGGAAACCCTAG+GGG + chr7_3:2067766-2067785 Msa1088690:intron 55.0%
! CGGATCTTAGCCCCGTGTTT+TGG + chr7_3:2059547-2059566 Msa1088690:intron 55.0%
CGTGGTGTCCGTGTCGTGTT+CGG - chr7_3:2057054-2057073 None:intergenic 60.0%
ACGACACGGACACCACGACA+CGG + chr7_3:2057057-2057076 Msa1088690:intron 60.0%
!! AAGTGTCGGTGTCGTGTCGC+TGG + chr7_3:2057140-2057159 Msa1088690:intron 60.0%
!! AGTGTCGGTGTCGTGTCGCT+GGG + chr7_3:2057141-2057160 Msa1088690:intron 60.0%
! TGCGGAAGCTGCAGCGTTGA+AGG + chr7_3:2057983-2058002 Msa1088690:CDS 60.0%
CTGTGGCGCAACATCGTTGG+AGG + chr7_3:2062533-2062552 Msa1088690:intron 60.0%
CAAAGCGCAGCAGCAAAGGG+AGG - chr7_3:2063371-2063390 None:intergenic 60.0%
GCACAAGCAGAGACGTGCAG+GGG + chr7_3:2064067-2064086 Msa1088690:intron 60.0%
GTCAGTGTCCGTGTCGTGTC+CGG - chr7_3:2066151-2066170 None:intergenic 60.0%
CGCCTGATCCGAGGACAGTT+TGG + chr7_3:2066276-2066295 Msa1088690:intron 60.0%
AGCCAGGAAACCCTAGGGGA+AGG + chr7_3:2067770-2067789 Msa1088690:intron 60.0%
GCCAGGAAACCCTAGGGGAA+GGG + chr7_3:2067771-2067790 Msa1088690:intron 60.0%
AGGGTTTCGCCCTTCCCCTA+GGG - chr7_3:2067783-2067802 Msa1088710:three_prime_UTR 60.0%
TAGGGTTTCGCCCTTCCCCT+AGG - chr7_3:2067784-2067803 Msa1088710:three_prime_UTR 60.0%
GCGTGTCAGTGTCCGTGTCG+TGG - chr7_3:2057072-2057091 None:intergenic 65.0%
AGCGCAGCAGCAAAGGGAGG+AGG - chr7_3:2063368-2063387 None:intergenic 65.0%
CAAGCAGAGACGTGCAGGGG+AGG + chr7_3:2064070-2064089 Msa1088690:intron 65.0%
ACGGATGCGGACACGGACAC+CGG + chr7_3:2066129-2066148 Msa1088690:intron 65.0%
CACGGACACCGGACACGACA+CGG + chr7_3:2066140-2066159 Msa1088690:intron 65.0%
ACTGGGACACGCCTGATCCG+AGG + chr7_3:2066267-2066286 Msa1088690:intron 65.0%
GCCCTTCCCCTAGGGTTTCC+TGG - chr7_3:2067775-2067794 Msa1088710:three_prime_UTR 65.0%
ACGTCTCCGCTGGCGGAGCA+AGG - chr7_3:2065465-2065484 None:intergenic 70.0%
GACGTGCAGGGGAGGTCGCC+CGG + chr7_3:2064078-2064097 Msa1088690:intron 75.0%
ATCGAGCCCGGGCTACCGCC+CGG - chr7_3:2064109-2064128 None:intergenic 75.0%
! GGGAGGTCGCCCGGCGATCC+CGG + chr7_3:2064087-2064106 Msa1088690:intron 80.0%
! GGAGGTCGCCCGGCGATCCC+GGG + chr7_3:2064088-2064107 Msa1088690:intron 80.0%
! GGCTACCGCCCGGGATCGCC+GGG - chr7_3:2064099-2064118 None:intergenic 80.0%
! GGGCTACCGCCCGGGATCGC+CGG - chr7_3:2064100-2064119 None:intergenic 80.0%
! GGCGATCCCGGGCGGTAGCC+CGG + chr7_3:2064099-2064118 Msa1088690:intron 80.0%
! GCGATCCCGGGCGGTAGCCC+GGG + chr7_3:2064100-2064119 Msa1088690:intron 80.0%
! TCGAGCCCGGGCTACCGCCC+GGG - chr7_3:2064108-2064127 None:intergenic 80.0%
! GGTCGCCCGGCGATCCCGGG+CGG + chr7_3:2064091-2064110 Msa1088690:intron 85.0%
Chromosome Type Strat End Strand Name
chr7_3 gene 2056391 2068875 2056391 ID=Msa1088690;Name=Msa1088690
chr7_3 mRNA 2056391 2068875 2056391 ID=Msa1088690-mRNA-1;Parent=Msa1088690;Name=Msa1088690-mRNA-1;_AED=0.31;_eAED=0.31;_QI=115|1|1|1|0.5|0.33|3|1034|227
chr7_3 exon 2056391 2056753 2056391 ID=Msa1088690-mRNA-1:exon:754;Parent=Msa1088690-mRNA-1
chr7_3 exon 2057737 2058699 2057737 ID=Msa1088690-mRNA-1:exon:755;Parent=Msa1088690-mRNA-1
chr7_3 exon 2068369 2068875 2068369 ID=Msa1088690-mRNA-1:exon:756;Parent=Msa1088690-mRNA-1
chr7_3 five_prime_UTR 2056391 2056505 2056391 ID=Msa1088690-mRNA-1:five_prime_utr;Parent=Msa1088690-mRNA-1
chr7_3 CDS 2056506 2056753 2056506 ID=Msa1088690-mRNA-1:cds;Parent=Msa1088690-mRNA-1
chr7_3 CDS 2057737 2058172 2057737 ID=Msa1088690-mRNA-1:cds;Parent=Msa1088690-mRNA-1
chr7_3 three_prime_UTR 2058173 2058699 2058173 ID=Msa1088690-mRNA-1:three_prime_utr;Parent=Msa1088690-mRNA-1
chr7_3 three_prime_UTR 2068369 2068875 2068369 ID=Msa1088690-mRNA-1:three_prime_utr;Parent=Msa1088690-mRNA-1
Gene Sequence

>Msa1088690

ATGCAATCCATGGCTGTAACCAGCACAACATGGAAGCTCTCACTGTTCTTGACTCTTATCTCAATTTCATTATCAGGTATTCTTTCATATGATATTGTACCATGCAAACGCATAGAGTGTCCCAACTATGATGTCATAGAAGCTGGAAATGGCTATGAAATCAGACGTTATAATTCGTCTGTTTGGATTTCCAATTCTCCTATTCAAGACATTTCTCTTGTTGAAGCTACTAGAACTGGTTTCCGGAGGCTATTTGATTACATTCAGGGGAAGAACAACTACCAGCAAAAAATTGAGATGACAGCACCTGTGCTCTCTGAAGTCTTACCAAGTGATGGACCATTTTGTGAGTCTTCATTTGTTGTCAGCTTTTATGTACCAAAAGTGAACCAAGCAAATCCACCACCTGCAAAGGGTCTTCATGTTCAAAGATGGAAAACTGTGTATGCAGCAGTTAGACAGTTTGGTGGTTTTGTCAAAGATACAGATGTTGGTGCGGAAGCTGCAGCGTTGAAGGACAGTATTGCCGGTACTAAGTGGTCTTCTGCTATTGAACAAAGCCGTAGAGCTGGTCATGCTTCAGTTTACTCTGTTGCCCAGTACAATGCCCCTTTTGAATATGATAATAGGGTGAATGAGATATGGTTCTTGTTTGATTTGGAAAATGGTTTGCATTCTATGTGA

Protein sequence

>Msa1088690

MQSMAVTSTTWKLSLFLTLISISLSGILSYDIVPCKRIECPNYDVIEAGNGYEIRRYNSSVWISNSPIQDISLVEATRTGFRRLFDYIQGKNNYQQKIEMTAPVLSEVLPSDGPFCESSFVVSFYVPKVNQANPPPAKGLHVQRWKTVYAAVRQFGGFVKDTDVGAEAAALKDSIAGTKWSSAIEQSRRAGHASVYSVAQYNAPFEYDNRVNEIWFLFDLENGLHSM*