Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0345140 | XP_003600596.2 | 96.045 | 177 | 7 | 0 | 1 | 177 | 1 | 177 | 5.17e-123 | 354 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0345140 | sp|Q2V4B2|PQL3_ARATH | 38.333 | 180 | 84 | 6 | 25 | 177 | 8 | 187 | 1.27e-29 | 110 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0345140 | G7J7V3 | 96.045 | 177 | 7 | 0 | 1 | 177 | 1 | 177 | 2.47e-123 | 354 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0003470 | Msa0345140 | 0.806728 | 7.144859e-50 | -8.615850e-47 |
| Msa0007450 | Msa0345140 | 0.801751 | 7.766873e-49 | -8.615850e-47 |
| Msa0012460 | Msa0345140 | 0.826004 | 3.441154e-54 | -8.615850e-47 |
| Msa0017120 | Msa0345140 | 0.830516 | 2.811127e-55 | -8.615850e-47 |
| Msa0027540 | Msa0345140 | 0.803990 | 2.677171e-49 | -8.615850e-47 |
| Msa0030000 | Msa0345140 | 0.807249 | 5.543805e-50 | -8.615850e-47 |
| Msa0030730 | Msa0345140 | 0.834633 | 2.677669e-56 | -8.615850e-47 |
| Msa0037820 | Msa0345140 | 0.802335 | 5.891044e-49 | -8.615850e-47 |
| Msa0048020 | Msa0345140 | 0.812634 | 3.841235e-51 | -8.615850e-47 |
| Msa0056040 | Msa0345140 | 0.816557 | 5.202031e-52 | -8.615850e-47 |
| Msa0056130 | Msa0345140 | 0.807945 | 3.943973e-50 | -8.615850e-47 |
| Msa0060350 | Msa0345140 | 0.822205 | 2.683410e-53 | -8.615850e-47 |
| Msa0061320 | Msa0345140 | 0.832048 | 1.180644e-55 | -8.615850e-47 |
| Msa0062750 | Msa0345140 | 0.804848 | 1.773562e-49 | -8.615850e-47 |
| Msa0068410 | Msa0345140 | 0.806604 | 7.589862e-50 | -8.615850e-47 |
| Msa0075310 | Msa0345140 | 0.800329 | 1.516696e-48 | -8.615850e-47 |
| Msa0078090 | Msa0345140 | 0.803651 | 3.148196e-49 | -8.615850e-47 |
| Msa0084680 | Msa0345140 | 0.822027 | 2.950622e-53 | -8.615850e-47 |
| Msa0089210 | Msa0345140 | 0.834572 | 2.773658e-56 | -8.615850e-47 |
| Msa0091480 | Msa0345140 | 0.820208 | 7.743072e-53 | -8.615850e-47 |
| Msa0092660 | Msa0345140 | 0.827653 | 1.388937e-54 | -8.615850e-47 |
| Msa0092730 | Msa0345140 | 0.822493 | 2.300009e-53 | -8.615850e-47 |
| Msa0094670 | Msa0345140 | 0.811882 | 5.604007e-51 | -8.615850e-47 |
| Msa0103780 | Msa0345140 | 0.815066 | 1.118561e-51 | -8.615850e-47 |
| Msa0105210 | Msa0345140 | 0.806288 | 8.846747e-50 | -8.615850e-47 |
| Msa0107460 | Msa0345140 | 0.824244 | 8.963547e-54 | -8.615850e-47 |
| Msa0115010 | Msa0345140 | 0.832048 | 1.180644e-55 | -8.615850e-47 |
| Msa0123170 | Msa0345140 | 0.800773 | 1.231644e-48 | -8.615850e-47 |
| Msa0125440 | Msa0345140 | 0.802556 | 5.304660e-49 | -8.615850e-47 |
| Msa0130800 | Msa0345140 | 0.818268 | 2.141734e-52 | -8.615850e-47 |
| Msa0135980 | Msa0345140 | 0.833931 | 4.016046e-56 | -8.615850e-47 |
| Msa0137600 | Msa0345140 | 0.817607 | 3.021387e-52 | -8.615850e-47 |
| Msa0139050 | Msa0345140 | 0.808432 | 3.105543e-50 | -8.615850e-47 |
| Msa0141430 | Msa0345140 | 0.807189 | 5.707515e-50 | -8.615850e-47 |
| Msa0141550 | Msa0345140 | 0.846120 | 2.652043e-59 | -8.615850e-47 |
| Msa0141670 | Msa0345140 | 0.833203 | 6.103778e-56 | -8.615850e-47 |
| Msa0143970 | Msa0345140 | 0.828518 | 8.596747e-55 | -8.615850e-47 |
| Msa0143980 | Msa0345140 | 0.821629 | 3.646968e-53 | -8.615850e-47 |
| Msa0144340 | Msa0345140 | 0.832021 | 1.198751e-55 | -8.615850e-47 |
| Msa0149500 | Msa0345140 | 0.821294 | 4.359702e-53 | -8.615850e-47 |
| Msa0152380 | Msa0345140 | 0.814370 | 1.594500e-51 | -8.615850e-47 |
| Msa0157020 | Msa0345140 | 0.834958 | 2.218429e-56 | -8.615850e-47 |
| Msa0157350 | Msa0345140 | 0.812323 | 4.492789e-51 | -8.615850e-47 |
| Msa0159750 | Msa0345140 | 0.803252 | 3.808479e-49 | -8.615850e-47 |
| Msa0162030 | Msa0345140 | 0.806207 | 9.200793e-50 | -8.615850e-47 |
| Msa0170680 | Msa0345140 | 0.828050 | 1.115236e-54 | -8.615850e-47 |
| Msa0180750 | Msa0345140 | 0.809150 | 2.180806e-50 | -8.615850e-47 |
| Msa0181020 | Msa0345140 | 0.808239 | 3.415367e-50 | -8.615850e-47 |
| Msa0183610 | Msa0345140 | 0.839935 | 1.176274e-57 | -8.615850e-47 |
| Msa0183620 | Msa0345140 | 0.816082 | 6.641360e-52 | -8.615850e-47 |
| Msa0185390 | Msa0345140 | 0.817177 | 3.775789e-52 | -8.615850e-47 |
| Msa0194570 | Msa0345140 | 0.816242 | 6.118155e-52 | -8.615850e-47 |
| Msa0197900 | Msa0345140 | 0.808333 | 3.261350e-50 | -8.615850e-47 |
| Msa0206940 | Msa0345140 | 0.826424 | 2.733585e-54 | -8.615850e-47 |
| Msa0207000 | Msa0345140 | 0.810765 | 9.794400e-51 | -8.615850e-47 |
| Msa0213080 | Msa0345140 | 0.852146 | 5.589590e-61 | -8.615850e-47 |
| Msa0217470 | Msa0345140 | 0.841542 | 4.461021e-58 | -8.615850e-47 |
| Msa0222070 | Msa0345140 | 0.810660 | 1.031961e-50 | -8.615850e-47 |
| Msa0222120 | Msa0345140 | 0.812385 | 4.353700e-51 | -8.615850e-47 |
| Msa0223390 | Msa0345140 | 0.814614 | 1.408223e-51 | -8.615850e-47 |
| Msa0227290 | Msa0345140 | 0.801751 | 7.765119e-49 | -8.615850e-47 |
| Msa0227500 | Msa0345140 | 0.824858 | 6.427641e-54 | -8.615850e-47 |
| Msa0239660 | Msa0345140 | 0.808756 | 2.648540e-50 | -8.615850e-47 |
| Msa0242290 | Msa0345140 | 0.800792 | 1.220585e-48 | -8.615850e-47 |
| Msa0252180 | Msa0345140 | 0.810961 | 8.884074e-51 | -8.615850e-47 |
| Msa0257130 | Msa0345140 | 0.807895 | 4.041401e-50 | -8.615850e-47 |
| Msa0257310 | Msa0345140 | 0.827725 | 1.334626e-54 | -8.615850e-47 |
| Msa0263620 | Msa0345140 | 0.814840 | 1.255011e-51 | -8.615850e-47 |
| Msa0277640 | Msa0345140 | 0.806493 | 8.010114e-50 | -8.615850e-47 |
| Msa0282860 | Msa0345140 | 0.804043 | 2.610366e-49 | -8.615850e-47 |
| Msa0285740 | Msa0345140 | 0.804680 | 1.923061e-49 | -8.615850e-47 |
| Msa0296610 | Msa0345140 | 0.846710 | 1.830509e-59 | -8.615850e-47 |
| Msa0298970 | Msa0345140 | 0.811327 | 7.398984e-51 | -8.615850e-47 |
| Msa0301180 | Msa0345140 | 0.805643 | 1.209300e-49 | -8.615850e-47 |
| Msa0314790 | Msa0345140 | 0.803225 | 3.859509e-49 | -8.615850e-47 |
| Msa0317260 | Msa0345140 | 0.808072 | 3.706037e-50 | -8.615850e-47 |
| Msa0320540 | Msa0345140 | 0.804536 | 2.060636e-49 | -8.615850e-47 |
| Msa0321800 | Msa0345140 | 0.811362 | 7.272223e-51 | -8.615850e-47 |
| Msa0333900 | Msa0345140 | 0.809276 | 2.049307e-50 | -8.615850e-47 |
| Msa0334020 | Msa0345140 | 0.804299 | 2.308861e-49 | -8.615850e-47 |
| Msa0334980 | Msa0345140 | 0.842252 | 2.896415e-58 | -8.615850e-47 |
| Msa0339860 | Msa0345140 | 0.807661 | 4.532502e-50 | -8.615850e-47 |
| Msa0342620 | Msa0345140 | 0.804555 | 2.042105e-49 | -8.615850e-47 |
| Msa0344070 | Msa0345140 | 0.808295 | 3.322500e-50 | -8.615850e-47 |
| Msa0345140 | Msa0352200 | 0.804535 | 2.062107e-49 | -8.615850e-47 |
| Msa0345140 | Msa0354490 | 0.800964 | 1.125734e-48 | -8.615850e-47 |
| Msa0345140 | Msa0367370 | 0.805032 | 1.623404e-49 | -8.615850e-47 |
| Msa0345140 | Msa0367490 | 0.825067 | 5.735808e-54 | -8.615850e-47 |
| Msa0345140 | Msa0371610 | 0.810725 | 9.992836e-51 | -8.615850e-47 |
| Msa0345140 | Msa0379110 | 0.804378 | 2.222983e-49 | -8.615850e-47 |
| Msa0345140 | Msa0380310 | 0.806913 | 6.530494e-50 | -8.615850e-47 |
| Msa0345140 | Msa0380420 | 0.801209 | 1.003099e-48 | -8.615850e-47 |
| Msa0345140 | Msa0380430 | 0.814332 | 1.626403e-51 | -8.615850e-47 |
| Msa0345140 | Msa0380520 | 0.803871 | 2.835133e-49 | -8.615850e-47 |
| Msa0345140 | Msa0382500 | 0.807440 | 5.049050e-50 | -8.615850e-47 |
| Msa0345140 | Msa0382560 | 0.828645 | 8.011575e-55 | -8.615850e-47 |
| Msa0345140 | Msa0409820 | 0.811810 | 5.811645e-51 | -8.615850e-47 |
| Msa0345140 | Msa0411560 | 0.830465 | 2.891836e-55 | -8.615850e-47 |
| Msa0345140 | Msa0413180 | 0.827677 | 1.370539e-54 | -8.615850e-47 |
| Msa0345140 | Msa0413740 | 0.847947 | 8.376654e-60 | -8.615850e-47 |
| Msa0345140 | Msa0415460 | 0.873467 | 1.438232e-67 | -8.615850e-47 |
| Msa0345140 | Msa0417630 | 0.820370 | 7.110293e-53 | -8.615850e-47 |
| Msa0345140 | Msa0423600 | 0.800466 | 1.422127e-48 | -8.615850e-47 |
| Msa0345140 | Msa0430020 | 0.811768 | 5.936061e-51 | -8.615850e-47 |
| Msa0345140 | Msa0432680 | 0.823224 | 1.554093e-53 | -8.615850e-47 |
| Msa0345140 | Msa0436450 | 0.807947 | 3.940082e-50 | -8.615850e-47 |
| Msa0345140 | Msa0446480 | 0.809675 | 1.682751e-50 | -8.615850e-47 |
| Msa0345140 | Msa0450460 | 0.815396 | 9.443198e-52 | -8.615850e-47 |
| Msa0345140 | Msa0458110 | 0.855197 | 7.415028e-62 | -8.615850e-47 |
| Msa0345140 | Msa0458790 | 0.818600 | 1.800899e-52 | -8.615850e-47 |
| Msa0345140 | Msa0458830 | 0.820049 | 8.421420e-53 | -8.615850e-47 |
| Msa0345140 | Msa0473490 | 0.817860 | 2.648513e-52 | -8.615850e-47 |
| Msa0345140 | Msa0476180 | 0.813719 | 2.219459e-51 | -8.615850e-47 |
| Msa0345140 | Msa0486530 | 0.831328 | 1.776850e-55 | -8.615850e-47 |
| Msa0345140 | Msa0502500 | 0.809004 | 2.343681e-50 | -8.615850e-47 |
| Msa0345140 | Msa0504730 | 0.814436 | 1.542445e-51 | -8.615850e-47 |
| Msa0345140 | Msa0505390 | 0.846225 | 2.481977e-59 | -8.615850e-47 |
| Msa0345140 | Msa0512130 | 0.819688 | 1.018587e-52 | -8.615850e-47 |
| Msa0345140 | Msa0517300 | 0.805899 | 1.068088e-49 | -8.615850e-47 |
| Msa0345140 | Msa0524050 | 0.827733 | 1.329011e-54 | -8.615850e-47 |
| Msa0345140 | Msa0524120 | 0.808914 | 2.450418e-50 | -8.615850e-47 |
| Msa0345140 | Msa0525240 | 0.831056 | 2.071789e-55 | -8.615850e-47 |
| Msa0345140 | Msa0526130 | 0.800332 | 1.514459e-48 | -8.615850e-47 |
| Msa0345140 | Msa0528740 | 0.807629 | 4.604257e-50 | -8.615850e-47 |
| Msa0345140 | Msa0530930 | 0.816071 | 6.679638e-52 | -8.615850e-47 |
| Msa0345140 | Msa0532840 | 0.860674 | 1.751808e-63 | -8.615850e-47 |
| Msa0345140 | Msa0533010 | 0.857441 | 1.629301e-62 | -8.615850e-47 |
| Msa0345140 | Msa0539320 | 0.828801 | 7.347008e-55 | -8.615850e-47 |
| Msa0345140 | Msa0542010 | 0.813574 | 2.388819e-51 | -8.615850e-47 |
| Msa0345140 | Msa0542040 | 0.826724 | 2.317945e-54 | -8.615850e-47 |
| Msa0345140 | Msa0546380 | 0.840156 | 1.030301e-57 | -8.615850e-47 |
| Msa0345140 | Msa0546740 | 0.845822 | 3.195724e-59 | -8.615850e-47 |
| Msa0345140 | Msa0553350 | 0.815273 | 1.006136e-51 | -8.615850e-47 |
| Msa0345140 | Msa0553520 | 0.817425 | 3.319308e-52 | -8.615850e-47 |
| Msa0345140 | Msa0555940 | 0.801584 | 8.406402e-49 | -8.615850e-47 |
| Msa0345140 | Msa0567290 | 0.830123 | 3.506486e-55 | -8.615850e-47 |
| Msa0345140 | Msa0574170 | 0.828187 | 1.033583e-54 | -8.615850e-47 |
| Msa0345140 | Msa0575250 | 0.811063 | 8.443254e-51 | -8.615850e-47 |
| Msa0345140 | Msa0576420 | 0.851104 | 1.103015e-60 | -8.615850e-47 |
| Msa0345140 | Msa0579610 | 0.802898 | 4.508895e-49 | -8.615850e-47 |
| Msa0345140 | Msa0583930 | 0.802410 | 5.684474e-49 | -8.615850e-47 |
| Msa0345140 | Msa0587900 | 0.811866 | 5.649899e-51 | -8.615850e-47 |
| Msa0345140 | Msa0589290 | 0.820701 | 5.967844e-53 | -8.615850e-47 |
| Msa0345140 | Msa0598250 | 0.814350 | 1.610873e-51 | -8.615850e-47 |
| Msa0345140 | Msa0600390 | 0.817772 | 2.773141e-52 | -8.615850e-47 |
| Msa0345140 | Msa0602800 | 0.802812 | 4.696276e-49 | -8.615850e-47 |
| Msa0345140 | Msa0604700 | 0.832034 | 1.189794e-55 | -8.615850e-47 |
| Msa0345140 | Msa0605620 | 0.811336 | 7.368617e-51 | -8.615850e-47 |
| Msa0345140 | Msa0607280 | 0.807925 | 3.983594e-50 | -8.615850e-47 |
| Msa0345140 | Msa0607300 | 0.822439 | 2.367922e-53 | -8.615850e-47 |
| Msa0345140 | Msa0619330 | 0.855793 | 4.971709e-62 | -8.615850e-47 |
| Msa0345140 | Msa0621770 | 0.806259 | 8.971727e-50 | -8.615850e-47 |
| Msa0345140 | Msa0622390 | 0.814496 | 1.495861e-51 | -8.615850e-47 |
| Msa0345140 | Msa0628060 | 0.813085 | 3.059322e-51 | -8.615850e-47 |
| Msa0345140 | Msa0629500 | 0.808797 | 2.596177e-50 | -8.615850e-47 |
| Msa0345140 | Msa0635130 | 0.829499 | 4.975098e-55 | -8.615850e-47 |
| Msa0345140 | Msa0640880 | 0.815422 | 9.319151e-52 | -8.615850e-47 |
| Msa0345140 | Msa0642650 | 0.817816 | 2.710255e-52 | -8.615850e-47 |
| Msa0345140 | Msa0643800 | 0.826442 | 2.706776e-54 | -8.615850e-47 |
| Msa0345140 | Msa0650360 | 0.803694 | 3.084859e-49 | -8.615850e-47 |
| Msa0345140 | Msa0659040 | 0.827882 | 1.223976e-54 | -8.615850e-47 |
| Msa0345140 | Msa0660410 | 0.805204 | 1.494415e-49 | -8.615850e-47 |
| Msa0345140 | Msa0667970 | 0.843091 | 1.734055e-58 | -8.615850e-47 |
| Msa0345140 | Msa0681890 | 0.843303 | 1.522354e-58 | -8.615850e-47 |
| Msa0345140 | Msa0682400 | 0.830668 | 2.579670e-55 | -8.615850e-47 |
| Msa0345140 | Msa0683650 | 0.831252 | 1.854908e-55 | -8.615850e-47 |
| Msa0345140 | Msa0685540 | 0.811764 | 5.946060e-51 | -8.615850e-47 |
| Msa0345140 | Msa0690350 | 0.852542 | 4.310395e-61 | -8.615850e-47 |
| Msa0345140 | Msa0690530 | 0.802681 | 4.999029e-49 | -8.615850e-47 |
| Msa0345140 | Msa0690720 | 0.802294 | 6.006520e-49 | -8.615850e-47 |
| Msa0345140 | Msa0703720 | 0.808627 | 2.822860e-50 | -8.615850e-47 |
| Msa0345140 | Msa0703760 | 0.826690 | 2.362048e-54 | -8.615850e-47 |
| Msa0345140 | Msa0704990 | 0.816634 | 4.998058e-52 | -8.615850e-47 |
| Msa0345140 | Msa0707780 | 0.846042 | 2.784620e-59 | -8.615850e-47 |
| Msa0345140 | Msa0709480 | 0.830340 | 3.102502e-55 | -8.615850e-47 |
| Msa0345140 | Msa0719340 | 0.842143 | 3.096191e-58 | -8.615850e-47 |
| Msa0345140 | Msa0720270 | 0.808288 | 3.333185e-50 | -8.615850e-47 |
| Msa0345140 | Msa0730180 | 0.853778 | 1.908660e-61 | -8.615850e-47 |
| Msa0345140 | Msa0733000 | 0.831698 | 1.440735e-55 | -8.615850e-47 |
| Msa0345140 | Msa0744450 | 0.815970 | 7.036419e-52 | -8.615850e-47 |
| Msa0345140 | Msa0756480 | 0.805275 | 1.444437e-49 | -8.615850e-47 |
| Msa0345140 | Msa0770430 | 0.837284 | 5.691607e-57 | -8.615850e-47 |
| Msa0345140 | Msa0772150 | 0.837894 | 3.970138e-57 | -8.615850e-47 |
| Msa0345140 | Msa0772210 | 0.812404 | 4.313551e-51 | -8.615850e-47 |
| Msa0345140 | Msa0780140 | 0.805207 | 1.492088e-49 | -8.615850e-47 |
| Msa0345140 | Msa0790830 | 0.828740 | 7.597990e-55 | -8.615850e-47 |
| Msa0345140 | Msa0797220 | 0.813618 | 2.336030e-51 | -8.615850e-47 |
| Msa0345140 | Msa0800130 | 0.819023 | 1.443932e-52 | -8.615850e-47 |
| Msa0345140 | Msa0802210 | 0.801428 | 9.044446e-49 | -8.615850e-47 |
| Msa0345140 | Msa0802500 | 0.812343 | 4.446557e-51 | -8.615850e-47 |
| Msa0345140 | Msa0808420 | 0.834949 | 2.229957e-56 | -8.615850e-47 |
| Msa0345140 | Msa0811510 | 0.834726 | 2.536463e-56 | -8.615850e-47 |
| Msa0345140 | Msa0829570 | 0.809825 | 1.562310e-50 | -8.615850e-47 |
| Msa0345140 | Msa0835510 | 0.812163 | 4.868857e-51 | -8.615850e-47 |
| Msa0345140 | Msa0837990 | 0.801167 | 1.023275e-48 | -8.615850e-47 |
| Msa0345140 | Msa0848360 | 0.813003 | 3.188542e-51 | -8.615850e-47 |
| Msa0345140 | Msa0848380 | 0.809911 | 1.497609e-50 | -8.615850e-47 |
| Msa0345140 | Msa0851740 | 0.832242 | 1.056821e-55 | -8.615850e-47 |
| Msa0345140 | Msa0863250 | 0.807823 | 4.186788e-50 | -8.615850e-47 |
| Msa0345140 | Msa0864150 | 0.807676 | 4.500417e-50 | -8.615850e-47 |
| Msa0345140 | Msa0864950 | 0.820516 | 6.582518e-53 | -8.615850e-47 |
| Msa0345140 | Msa0872660 | 0.804876 | 1.750334e-49 | -8.615850e-47 |
| Msa0345140 | Msa0873830 | 0.814158 | 1.776925e-51 | -8.615850e-47 |
| Msa0345140 | Msa0880230 | 0.810390 | 1.180202e-50 | -8.615850e-47 |
| Msa0345140 | Msa0881050 | 0.813265 | 2.793711e-51 | -8.615850e-47 |
| Msa0345140 | Msa0890250 | 0.835299 | 1.819447e-56 | -8.615850e-47 |
| Msa0345140 | Msa0906720 | 0.813854 | 2.072568e-51 | -8.615850e-47 |
| Msa0345140 | Msa0925160 | 0.847230 | 1.318936e-59 | -8.615850e-47 |
| Msa0345140 | Msa0930330 | 0.820731 | 5.876147e-53 | -8.615850e-47 |
| Msa0345140 | Msa0931730 | 0.810006 | 1.428509e-50 | -8.615850e-47 |
| Msa0345140 | Msa0935730 | 0.817062 | 4.007556e-52 | -8.615850e-47 |
| Msa0345140 | Msa0937940 | 0.846076 | 2.726374e-59 | -8.615850e-47 |
| Msa0345140 | Msa0946650 | 0.811172 | 7.995552e-51 | -8.615850e-47 |
| Msa0345140 | Msa0955260 | 0.841515 | 4.534210e-58 | -8.615850e-47 |
| Msa0345140 | Msa0958020 | 0.803957 | 2.720577e-49 | -8.615850e-47 |
| Msa0345140 | Msa0972730 | 0.808555 | 2.923709e-50 | -8.615850e-47 |
| Msa0345140 | Msa0975080 | 0.837002 | 6.719135e-57 | -8.615850e-47 |
| Msa0345140 | Msa0975910 | 0.805061 | 1.600815e-49 | -8.615850e-47 |
| Msa0345140 | Msa0981740 | 0.801810 | 7.555102e-49 | -8.615850e-47 |
| Msa0345140 | Msa0990520 | 0.806018 | 1.008451e-49 | -8.615850e-47 |
| Msa0345140 | Msa1000470 | 0.823878 | 1.092727e-53 | -8.615850e-47 |
| Msa0345140 | Msa1002040 | 0.804500 | 2.096755e-49 | -8.615850e-47 |
| Msa0345140 | Msa1022310 | 0.806276 | 8.898150e-50 | -8.615850e-47 |
| Msa0345140 | Msa1024140 | 0.810021 | 1.418072e-50 | -8.615850e-47 |
| Msa0345140 | Msa1027790 | 0.842627 | 2.303976e-58 | -8.615850e-47 |
| Msa0345140 | Msa1028460 | 0.804644 | 1.956528e-49 | -8.615850e-47 |
| Msa0345140 | Msa1029320 | 0.812322 | 4.493162e-51 | -8.615850e-47 |
| Msa0345140 | Msa1033160 | 0.810530 | 1.101149e-50 | -8.615850e-47 |
| Msa0345140 | Msa1038320 | 0.808564 | 2.910507e-50 | -8.615850e-47 |
| Msa0345140 | Msa1044040 | 0.842981 | 1.855478e-58 | -8.615850e-47 |
| Msa0345140 | Msa1055360 | 0.814518 | 1.479125e-51 | -8.615850e-47 |
| Msa0345140 | Msa1061180 | 0.823260 | 1.524544e-53 | -8.615850e-47 |
| Msa0345140 | Msa1067430 | 0.815494 | 8.984956e-52 | -8.615850e-47 |
| Msa0345140 | Msa1070900 | 0.810184 | 1.307721e-50 | -8.615850e-47 |
| Msa0345140 | Msa1072080 | 0.830309 | 3.158680e-55 | -8.615850e-47 |
| Msa0345140 | Msa1074630 | 0.809747 | 1.623875e-50 | -8.615850e-47 |
| Msa0345140 | Msa1080460 | 0.803637 | 3.170261e-49 | -8.615850e-47 |
| Msa0345140 | Msa1081850 | 0.826023 | 3.405438e-54 | -8.615850e-47 |
| Msa0345140 | Msa1084490 | 0.819712 | 1.005862e-52 | -8.615850e-47 |
| Msa0345140 | Msa1105290 | 0.800782 | 1.226165e-48 | -8.615850e-47 |
| Msa0345140 | Msa1106560 | 0.829815 | 4.167174e-55 | -8.615850e-47 |
| Msa0345140 | Msa1107970 | 0.807032 | 6.161870e-50 | -8.615850e-47 |
| Msa0345140 | Msa1111670 | 0.803103 | 4.090431e-49 | -8.615850e-47 |
| Msa0345140 | Msa1112610 | 0.851687 | 7.542902e-61 | -8.615850e-47 |
| Msa0345140 | Msa1116010 | 0.809046 | 2.296375e-50 | -8.615850e-47 |
| Msa0345140 | Msa1122510 | 0.837207 | 5.956583e-57 | -8.615850e-47 |
| Msa0345140 | Msa1125780 | 0.826783 | 2.244614e-54 | -8.615850e-47 |
| Msa0345140 | Msa1125950 | 0.827586 | 1.441968e-54 | -8.615850e-47 |
| Msa0345140 | Msa1130650 | 0.803778 | 2.963841e-49 | -8.615850e-47 |
| Msa0345140 | Msa1140010 | 0.817763 | 2.786011e-52 | -8.615850e-47 |
| Msa0345140 | Msa1149760 | 0.835642 | 1.490102e-56 | -8.615850e-47 |
| Msa0345140 | Msa1157160 | 0.805411 | 1.352383e-49 | -8.615850e-47 |
| Msa0345140 | Msa1159100 | 0.819020 | 1.446362e-52 | -8.615850e-47 |
| Msa0345140 | Msa1161160 | 0.821030 | 5.013354e-53 | -8.615850e-47 |
| Msa0345140 | Msa1166180 | 0.831983 | 1.224990e-55 | -8.615850e-47 |
| Msa0345140 | Msa1166280 | 0.829061 | 6.355657e-55 | -8.615850e-47 |
| Msa0345140 | Msa1171340 | 0.832237 | 1.060174e-55 | -8.615850e-47 |
| Msa0345140 | Msa1183390 | 0.827944 | 1.182404e-54 | -8.615850e-47 |
| Msa0345140 | Msa1183610 | 0.809847 | 1.545548e-50 | -8.615850e-47 |
| Msa0345140 | Msa1186210 | 0.820284 | 7.438455e-53 | -8.615850e-47 |
| Msa0345140 | Msa1190910 | 0.818312 | 2.093604e-52 | -8.615850e-47 |
| Msa0345140 | Msa1200920 | 0.801136 | 1.037914e-48 | -8.615850e-47 |
| Msa0345140 | Msa1214900 | 0.858357 | 8.707744e-63 | -8.615850e-47 |
| Msa0345140 | Msa1222390 | 0.819176 | 1.332465e-52 | -8.615850e-47 |
| Msa0345140 | Msa1222580 | 0.809932 | 1.481765e-50 | -8.615850e-47 |
| Msa0345140 | Msa1226360 | 0.856536 | 3.011546e-62 | -8.615850e-47 |
| Msa0345140 | Msa1226600 | 0.844529 | 7.146733e-59 | -8.615850e-47 |
| Msa0345140 | Msa1229050 | 0.826600 | 2.481816e-54 | -8.615850e-47 |
| Msa0345140 | Msa1233770 | 0.811553 | 6.608569e-51 | -8.615850e-47 |
| Msa0345140 | Msa1238480 | 0.829331 | 5.465141e-55 | -8.615850e-47 |
| Msa0345140 | Msa1238700 | 0.817518 | 3.164277e-52 | -8.615850e-47 |
| Msa0345140 | Msa1254770 | 0.810523 | 1.104993e-50 | -8.615850e-47 |
| Msa0345140 | Msa1254800 | 0.808048 | 3.749981e-50 | -8.615850e-47 |
| Msa0345140 | Msa1262310 | 0.817826 | 2.696111e-52 | -8.615850e-47 |
| Msa0345140 | Msa1268370 | 0.812213 | 4.746942e-51 | -8.615850e-47 |
| Msa0345140 | Msa1271490 | 0.825853 | 3.736810e-54 | -8.615850e-47 |
| Msa0345140 | Msa1271510 | 0.833960 | 3.949730e-56 | -8.615850e-47 |
| Msa0345140 | Msa1271600 | 0.801295 | 9.630861e-49 | -8.615850e-47 |
| Msa0345140 | Msa1276080 | 0.813354 | 2.670890e-51 | -8.615850e-47 |
| Msa0345140 | Msa1280020 | 0.828533 | 8.525702e-55 | -8.615850e-47 |
| Msa0345140 | Msa1281720 | 0.808140 | 3.584702e-50 | -8.615850e-47 |
| Msa0345140 | Msa1293530 | 0.801037 | 1.087434e-48 | -8.615850e-47 |
| Msa0345140 | Msa1302150 | 0.818898 | 1.540960e-52 | -8.615850e-47 |
| Msa0345140 | Msa1306590 | 0.809656 | 1.699140e-50 | -8.615850e-47 |
| Msa0345140 | Msa1309100 | 0.803554 | 3.297995e-49 | -8.615850e-47 |
| Msa0345140 | Msa1309360 | 0.833245 | 5.956431e-56 | -8.615850e-47 |
| Msa0345140 | Msa1325980 | 0.818364 | 2.036790e-52 | -8.615850e-47 |
| Msa0345140 | Msa1326000 | 0.836062 | 1.165899e-56 | -8.615850e-47 |
| Msa0345140 | Msa1344430 | 0.839182 | 1.846121e-57 | -8.615850e-47 |
| Msa0345140 | Msa1349360 | 0.819023 | 1.443802e-52 | -8.615850e-47 |
| Msa0345140 | Msa1354040 | 0.824295 | 8.722401e-54 | -8.615850e-47 |
| Msa0345140 | Msa1367940 | 0.824692 | 7.031625e-54 | -8.615850e-47 |
| Msa0345140 | Msa1368730 | 0.803106 | 4.083700e-49 | -8.615850e-47 |
| Msa0345140 | Msa1374810 | 0.802771 | 4.789249e-49 | -8.615850e-47 |
| Msa0345140 | Msa1375330 | 0.825000 | 5.951317e-54 | -8.615850e-47 |
| Msa0345140 | Msa1375630 | 0.802699 | 4.957121e-49 | -8.615850e-47 |
| Msa0345140 | Msa1376640 | 0.809483 | 1.850709e-50 | -8.615850e-47 |
| Msa0345140 | Msa1379980 | 0.823444 | 1.380565e-53 | -8.615850e-47 |
| Msa0345140 | Msa1381130 | 0.815733 | 7.945740e-52 | -8.615850e-47 |
| Msa0345140 | Msa1385900 | 0.814979 | 1.168982e-51 | -8.615850e-47 |
| Msa0345140 | Msa1388850 | 0.809023 | 2.322130e-50 | -8.615850e-47 |
| Msa0345140 | Msa1404370 | 0.826899 | 2.105596e-54 | -8.615850e-47 |
| Msa0345140 | Msa1405770 | 0.837676 | 4.516016e-57 | -8.615850e-47 |
| Msa0345140 | Msa1406550 | 0.815119 | 1.088496e-51 | -8.615850e-47 |
| Msa0345140 | Msa1406880 | 0.805888 | 1.073680e-49 | -8.615850e-47 |
| Msa0345140 | Msa1407710 | 0.838105 | 3.503590e-57 | -8.615850e-47 |
| Msa0345140 | Msa1410170 | 0.825924 | 3.594171e-54 | -8.615850e-47 |
| Msa0345140 | Msa1412520 | 0.838107 | 3.500110e-57 | -8.615850e-47 |
| Msa0345140 | Msa1415250 | 0.804782 | 1.830762e-49 | -8.615850e-47 |
| Msa0345140 | Msa1416460 | 0.800248 | 1.575427e-48 | -8.615850e-47 |
| Msa0345140 | Msa1418200 | 0.821499 | 3.908611e-53 | -8.615850e-47 |
| Msa0345140 | Msa1422490 | 0.814814 | 1.272195e-51 | -8.615850e-47 |
| Msa0345140 | Msa1422500 | 0.805890 | 1.072916e-49 | -8.615850e-47 |
| Msa0345140 | Msa1429830 | 0.817380 | 3.397448e-52 | -8.615850e-47 |
| Msa0345140 | Msa1430270 | 0.818356 | 2.045359e-52 | -8.615850e-47 |
| Msa0345140 | Msa1430760 | 0.806025 | 1.005032e-49 | -8.615850e-47 |
| Msa0345140 | Msa1432470 | 0.875230 | 3.629209e-68 | -8.615850e-47 |
| Msa0345140 | Msa1435040 | 0.825750 | 3.953319e-54 | -8.615850e-47 |
| Msa0345140 | Msa1435050 | 0.813392 | 2.620184e-51 | -8.615850e-47 |
| Msa0345140 | Msa1435670 | 0.828345 | 9.466769e-55 | -8.615850e-47 |
| Msa0345140 | Msa1439670 | 0.824943 | 6.136362e-54 | -8.615850e-47 |
| Msa0345140 | Msa1442300 | 0.807496 | 4.913246e-50 | -8.615850e-47 |
| Msa0345140 | Msa1447230 | 0.806594 | 7.626538e-50 | -8.615850e-47 |
| Msa0345140 | Msa1451840 | 0.803570 | 3.273241e-49 | -8.615850e-47 |
| Msa0345140 | Msa1458330 | 0.801893 | 7.261652e-49 | -8.615850e-47 |
| Msa0345140 | Msa1458920 | 0.803863 | 2.845705e-49 | -8.615850e-47 |
| Msa0345140 | Msa1464560 | 0.800753 | 1.243231e-48 | -8.615850e-47 |
| Msa0345140 | Msa1464800 | 0.813500 | 2.480971e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0345140 | MtrunA17_Chr3g0109401 | 96.045 | 177 | 7 | 0 | 1 | 177 | 1 | 177 | 4.75e-127 | 354 |
| Msa0345140 | MtrunA17_Chr8g0335111 | 29.524 | 105 | 74 | 0 | 73 | 177 | 127 | 231 | 8.23e-12 | 61.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0345140 | AT2G01918.1 | 38.333 | 180 | 84 | 6 | 25 | 177 | 8 | 187 | 1.29e-30 | 110 |
| Msa0345140 | AT4G21280.1 | 31.967 | 122 | 77 | 1 | 62 | 177 | 101 | 222 | 1.53e-16 | 74.7 |
| Msa0345140 | AT4G21280.2 | 31.967 | 122 | 77 | 1 | 62 | 177 | 102 | 223 | 1.62e-16 | 74.7 |
| Msa0345140 | AT4G05180.2 | 29.508 | 122 | 80 | 1 | 62 | 177 | 108 | 229 | 3.45e-15 | 71.2 |
| Msa0345140 | AT4G05180.1 | 29.508 | 122 | 80 | 1 | 62 | 177 | 108 | 229 | 3.45e-15 | 71.2 |
Find 47 sgRNAs with CRISPR-Local
Find 129 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTGACACAACATGTGAATTT+TGG | 0.139486 | 3_1:+4263022 | None:intergenic |
| GAAAATCAGTAGAAGAAATT+TGG | 0.169295 | 3_1:-4262957 | Msa0345140:CDS |
| GGTGCAAATGCATTTGATTT+TGG | 0.185334 | 3_1:-4262896 | Msa0345140:CDS |
| AAGTGTAGTTATCTCAATTT+TGG | 0.195442 | 3_1:-4262270 | Msa0345140:three_prime_UTR |
| TTAATGATACTACTGGATTT+TGG | 0.215799 | 3_1:+4263424 | None:intergenic |
| AACTGTGACCTTTCACTTCC+AGG | 0.232695 | 3_1:+4262695 | None:intergenic |
| ATTCTGGTGGATTTCAATTC+AGG | 0.251597 | 3_1:-4263364 | Msa0345140:five_prime_UTR |
| GTAGTATCATTAATTTATTC+TGG | 0.257112 | 3_1:-4263414 | Msa0345140:five_prime_UTR |
| AAAATCAGTAGAAGAAATTT+GGG | 0.278260 | 3_1:-4262956 | Msa0345140:CDS |
| TGTTGCATATATCATCAATT+TGG | 0.298723 | 3_1:-4262371 | Msa0345140:three_prime_UTR |
| GCCTCTTCAACTGTTTGATC+AGG | 0.315431 | 3_1:+4262863 | None:intergenic |
| TCAAGAATATAATAGTGTTT+TGG | 0.333968 | 3_1:-4262427 | Msa0345140:exon |
| TCAATTCAGGTTAATAAGTC+AGG | 0.342465 | 3_1:-4263351 | Msa0345140:five_prime_UTR |
| AAGTAGTTGAATGAAGAAAA+AGG | 0.357387 | 3_1:-4262398 | Msa0345140:three_prime_UTR |
| TAAAATAGGTGATAGTAAAA+TGG | 0.373135 | 3_1:-4262309 | Msa0345140:three_prime_UTR |
| TCATAACGCTGCCACACTTC+AGG | 0.379368 | 3_1:+4262481 | None:intergenic |
| AGAAAGAACATTTCAAAAGT+TGG | 0.385436 | 3_1:+4262231 | None:intergenic |
| ATTTGTGTTGTCCATTCAAT+TGG | 0.397123 | 3_1:-4263320 | Msa0345140:five_prime_UTR |
| GAACATTTCAAAAGTTGGCT+TGG | 0.408553 | 3_1:+4262236 | None:intergenic |
| GAGTGTCTAAATGTTAAAAT+AGG | 0.408697 | 3_1:-4262323 | Msa0345140:three_prime_UTR |
| GTGCGTCATGTTGGGTTGTA+AGG | 0.415699 | 3_1:+4263051 | None:intergenic |
| GTCATGGAAAATAGCACAAA+AGG | 0.423780 | 3_1:-4262777 | Msa0345140:CDS |
| ATATAATGACGCCAATTGAA+TGG | 0.470198 | 3_1:+4263309 | None:intergenic |
| GAATAAATTAATGATACTAC+TGG | 0.474132 | 3_1:+4263417 | None:intergenic |
| TTAGTGGAGAGTGCATGTTT+AGG | 0.480583 | 3_1:-4262925 | Msa0345140:CDS |
| GGAAACAAGTGCGTCATGTT+GGG | 0.491788 | 3_1:+4263043 | None:intergenic |
| GAGTGCATGTTTAGGACAAA+GGG | 0.498718 | 3_1:-4262917 | Msa0345140:CDS |
| TTTCCAACATTCACATCAGA+AGG | 0.499169 | 3_1:-4262990 | Msa0345140:CDS |
| ACCATAATTCAAAACAAGCC+TGG | 0.511434 | 3_1:-4262713 | Msa0345140:CDS |
| GAAGTGAAAGGTCACAGTTA+AGG | 0.517020 | 3_1:-4262691 | Msa0345140:CDS |
| TATTTGAATCAGATAAGATA+AGG | 0.518392 | 3_1:-4263289 | Msa0345140:intron |
| AATCCTTCTGATGTGAATGT+TGG | 0.518546 | 3_1:+4262987 | None:intergenic |
| TGGAAACAAGTGCGTCATGT+TGG | 0.523499 | 3_1:+4263042 | None:intergenic |
| ATACATGACATAAATTTGAC+TGG | 0.524986 | 3_1:-4262165 | None:intergenic |
| GTATCATTAATTTATTCTGG+TGG | 0.538763 | 3_1:-4263411 | Msa0345140:five_prime_UTR |
| CAATTCAGGTTAATAAGTCA+GGG | 0.543579 | 3_1:-4263350 | Msa0345140:five_prime_UTR |
| CCTCTTCAACTGTTTGATCA+GGG | 0.547039 | 3_1:+4262864 | None:intergenic |
| CCCTGATCAAACAGTTGAAG+AGG | 0.549247 | 3_1:-4262864 | Msa0345140:CDS |
| ATTTGTTAGAATCAAAGTCA+TGG | 0.560898 | 3_1:-4262793 | Msa0345140:CDS |
| AGGTTGAATTCAAAGAACAA+TGG | 0.584627 | 3_1:-4263089 | Msa0345140:exon |
| AGAGTGCATGTTTAGGACAA+AGG | 0.590403 | 3_1:-4262918 | Msa0345140:CDS |
| AAAACAAGCCTGGAAGTGAA+AGG | 0.596015 | 3_1:-4262703 | Msa0345140:CDS |
| TGTGAATGTTGGAAATTACA+AGG | 0.606329 | 3_1:+4262998 | None:intergenic |
| GCGTTATGAGAACATTGTTG+TGG | 0.635212 | 3_1:-4262467 | Msa0345140:CDS |
| TATGCAGCAAGAGATCATGA+TGG | 0.661307 | 3_1:-4262505 | Msa0345140:CDS |
| AAATCAGTAGAAGAAATTTG+GGG | 0.677600 | 3_1:-4262955 | Msa0345140:CDS |
| ATCATGATGGACCTGAAGTG+TGG | 0.696105 | 3_1:-4262492 | Msa0345140:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | CAGAATAAATTATTTTTTTT+TGG | + | chr3_1:4262308-4262327 | None:intergenic | 10.0% |
| !! | CAAAAAAAAATAATTTATTC+TGG | - | chr3_1:4262306-4262325 | Msa0345140:three_prime_UTR | 10.0% |
| !!! | CAGAATAAATTATTTTTTTT+TGG | + | chr3_1:4262308-4262327 | None:intergenic | 10.0% |
| !! | CAAAAAAAAATAATTTATTC+TGG | - | chr3_1:4262306-4262325 | Msa0345140:three_prime_UTR | 10.0% |
| !!! | TAAATTTTAGAATTTTGTGA+GGG | + | chr3_1:4262190-4262209 | None:intergenic | 15.0% |
| !! | AAAAAAATAATTTATTCTGG+TGG | - | chr3_1:4262309-4262328 | Msa0345140:three_prime_UTR | 15.0% |
| !!! | ATTGATGTTTATTTTTGTAT+TGG | - | chr3_1:4263137-4263156 | Msa0345140:intron | 15.0% |
| !!! | TTTGAAAATATATTTTGAGA+AGG | - | chr3_1:4263492-4263511 | Msa0345140:five_prime_UTR | 15.0% |
| !!! | TTGAAAATATATTTTGAGAA+GGG | - | chr3_1:4263493-4263512 | Msa0345140:five_prime_UTR | 15.0% |
| !!! | TAAATTTTAGAATTTTGTGA+GGG | + | chr3_1:4262190-4262209 | None:intergenic | 15.0% |
| !! | AAAAAAATAATTTATTCTGG+TGG | - | chr3_1:4262309-4262328 | Msa0345140:three_prime_UTR | 15.0% |
| !!! | ATTGATGTTTATTTTTGTAT+TGG | - | chr3_1:4263137-4263156 | Msa0345140:intron | 15.0% |
| !!! | TTTGAAAATATATTTTGAGA+AGG | - | chr3_1:4263492-4263511 | Msa0345140:five_prime_UTR | 15.0% |
| !!! | TTGAAAATATATTTTGAGAA+GGG | - | chr3_1:4263493-4263512 | Msa0345140:five_prime_UTR | 15.0% |
| !!! | CTAAATTTTAGAATTTTGTG+AGG | + | chr3_1:4262191-4262210 | None:intergenic | 20.0% |
| !! | GAATAAATTAATGATACTAC+TGG | + | chr3_1:4262272-4262291 | None:intergenic | 20.0% |
| !! | GTAGTATCATTAATTTATTC+TGG | - | chr3_1:4262272-4262291 | Msa0345140:three_prime_UTR | 20.0% |
| !! | TATTTGAATCAGATAAGATA+AGG | - | chr3_1:4262397-4262416 | Msa0345140:three_prime_UTR | 20.0% |
| !! | ACTTGAATTTCTAATATGAT+TGG | + | chr3_1:4262546-4262565 | None:intergenic | 20.0% |
| !!! | ATTACATTTGATGTTGTTTA+AGG | - | chr3_1:4262577-4262596 | Msa0345140:intron | 20.0% |
| !! | AAAATCAGTAGAAGAAATTT+GGG | - | chr3_1:4262730-4262749 | Msa0345140:CDS | 20.0% |
| !!! | TTTATTGTTTTTGTTGTGTA+AGG | - | chr3_1:4263099-4263118 | Msa0345140:intron | 20.0% |
| !!! | TCAAGAATATAATAGTGTTT+TGG | - | chr3_1:4263259-4263278 | Msa0345140:intron | 20.0% |
| !! | TAAAATAGGTGATAGTAAAA+TGG | - | chr3_1:4263377-4263396 | Msa0345140:five_prime_UTR | 20.0% |
| !!! | CTAAATTTTAGAATTTTGTG+AGG | + | chr3_1:4262191-4262210 | None:intergenic | 20.0% |
| !! | GAATAAATTAATGATACTAC+TGG | + | chr3_1:4262272-4262291 | None:intergenic | 20.0% |
| !! | GTAGTATCATTAATTTATTC+TGG | - | chr3_1:4262272-4262291 | Msa0345140:three_prime_UTR | 20.0% |
| !! | TATTTGAATCAGATAAGATA+AGG | - | chr3_1:4262397-4262416 | Msa0345140:three_prime_UTR | 20.0% |
| !! | ACTTGAATTTCTAATATGAT+TGG | + | chr3_1:4262546-4262565 | None:intergenic | 20.0% |
| !!! | ATTACATTTGATGTTGTTTA+AGG | - | chr3_1:4262577-4262596 | Msa0345140:intron | 20.0% |
| !! | AAAATCAGTAGAAGAAATTT+GGG | - | chr3_1:4262730-4262749 | Msa0345140:CDS | 20.0% |
| !!! | TTTATTGTTTTTGTTGTGTA+AGG | - | chr3_1:4263099-4263118 | Msa0345140:intron | 20.0% |
| !!! | TCAAGAATATAATAGTGTTT+TGG | - | chr3_1:4263259-4263278 | Msa0345140:intron | 20.0% |
| !! | TAAAATAGGTGATAGTAAAA+TGG | - | chr3_1:4263377-4263396 | Msa0345140:five_prime_UTR | 20.0% |
| !!! | ATGCTATCTCTCATTTTTTT+TGG | - | chr3_1:4262235-4262254 | Msa0345140:three_prime_UTR | 25.0% |
| !! | TTAATGATACTACTGGATTT+TGG | + | chr3_1:4262265-4262284 | None:intergenic | 25.0% |
| ! | GTATCATTAATTTATTCTGG+TGG | - | chr3_1:4262275-4262294 | Msa0345140:three_prime_UTR | 25.0% |
| ! | GAAAATCAGTAGAAGAAATT+TGG | - | chr3_1:4262729-4262748 | Msa0345140:CDS | 25.0% |
| ! | AAATCAGTAGAAGAAATTTG+GGG | - | chr3_1:4262731-4262750 | Msa0345140:CDS | 25.0% |
| !! | ATTTGTTAGAATCAAAGTCA+TGG | - | chr3_1:4262893-4262912 | Msa0345140:CDS | 25.0% |
| ! | AAGTAGTTGAATGAAGAAAA+AGG | - | chr3_1:4263288-4263307 | Msa0345140:intron | 25.0% |
| ! | TGTTGCATATATCATCAATT+TGG | - | chr3_1:4263315-4263334 | Msa0345140:five_prime_UTR | 25.0% |
| ! | GAGTGTCTAAATGTTAAAAT+AGG | - | chr3_1:4263363-4263382 | Msa0345140:five_prime_UTR | 25.0% |
| !! | AAGTGTAGTTATCTCAATTT+TGG | - | chr3_1:4263416-4263435 | Msa0345140:five_prime_UTR | 25.0% |
| ! | AGAAAGAACATTTCAAAAGT+TGG | + | chr3_1:4263458-4263477 | None:intergenic | 25.0% |
| ! | GATACATGACATAAATTTGA+CGG | - | chr3_1:4263520-4263539 | Msa0345140:five_prime_UTR | 25.0% |
| !!! | ATGCTATCTCTCATTTTTTT+TGG | - | chr3_1:4262235-4262254 | Msa0345140:three_prime_UTR | 25.0% |
| !! | TTAATGATACTACTGGATTT+TGG | + | chr3_1:4262265-4262284 | None:intergenic | 25.0% |
| ! | GTATCATTAATTTATTCTGG+TGG | - | chr3_1:4262275-4262294 | Msa0345140:three_prime_UTR | 25.0% |
| ! | GAAAATCAGTAGAAGAAATT+TGG | - | chr3_1:4262729-4262748 | Msa0345140:CDS | 25.0% |
| ! | AAATCAGTAGAAGAAATTTG+GGG | - | chr3_1:4262731-4262750 | Msa0345140:CDS | 25.0% |
| !! | ATTTGTTAGAATCAAAGTCA+TGG | - | chr3_1:4262893-4262912 | Msa0345140:CDS | 25.0% |
| ! | AAGTAGTTGAATGAAGAAAA+AGG | - | chr3_1:4263288-4263307 | Msa0345140:intron | 25.0% |
| ! | TGTTGCATATATCATCAATT+TGG | - | chr3_1:4263315-4263334 | Msa0345140:five_prime_UTR | 25.0% |
| ! | GAGTGTCTAAATGTTAAAAT+AGG | - | chr3_1:4263363-4263382 | Msa0345140:five_prime_UTR | 25.0% |
| !! | AAGTGTAGTTATCTCAATTT+TGG | - | chr3_1:4263416-4263435 | Msa0345140:five_prime_UTR | 25.0% |
| ! | AGAAAGAACATTTCAAAAGT+TGG | + | chr3_1:4263458-4263477 | None:intergenic | 25.0% |
| ! | TCAATTCAGGTTAATAAGTC+AGG | - | chr3_1:4262335-4262354 | Msa0345140:three_prime_UTR | 30.0% |
| ! | CAATTCAGGTTAATAAGTCA+GGG | - | chr3_1:4262336-4262355 | Msa0345140:three_prime_UTR | 30.0% |
| ATTTGTGTTGTCCATTCAAT+TGG | - | chr3_1:4262366-4262385 | Msa0345140:three_prime_UTR | 30.0% | |
| ATATAATGACGCCAATTGAA+TGG | + | chr3_1:4262380-4262399 | None:intergenic | 30.0% | |
| AAAGTGAAAGAAACTCTTCT+TGG | + | chr3_1:4262429-4262448 | None:intergenic | 30.0% | |
| AGGTTGAATTCAAAGAACAA+TGG | - | chr3_1:4262597-4262616 | Msa0345140:intron | 30.0% | |
| ! | TTGACACAACATGTGAATTT+TGG | + | chr3_1:4262667-4262686 | None:intergenic | 30.0% |
| TGTGAATGTTGGAAATTACA+AGG | + | chr3_1:4262691-4262710 | None:intergenic | 30.0% | |
| !! | AATTTGGGGTTGATTTTTAG+TGG | - | chr3_1:4262745-4262764 | Msa0345140:CDS | 30.0% |
| TCAACAATGTTACTAGAGTA+AGG | - | chr3_1:4263037-4263056 | Msa0345140:CDS | 30.0% | |
| GGAAACTTTGTCTTAAAACT+AGG | - | chr3_1:4263058-4263077 | Msa0345140:CDS | 30.0% | |
| ! | TCAATTCAGGTTAATAAGTC+AGG | - | chr3_1:4262335-4262354 | Msa0345140:three_prime_UTR | 30.0% |
| ! | CAATTCAGGTTAATAAGTCA+GGG | - | chr3_1:4262336-4262355 | Msa0345140:three_prime_UTR | 30.0% |
| ATTTGTGTTGTCCATTCAAT+TGG | - | chr3_1:4262366-4262385 | Msa0345140:three_prime_UTR | 30.0% | |
| ATATAATGACGCCAATTGAA+TGG | + | chr3_1:4262380-4262399 | None:intergenic | 30.0% | |
| AAAGTGAAAGAAACTCTTCT+TGG | + | chr3_1:4262429-4262448 | None:intergenic | 30.0% | |
| AGGTTGAATTCAAAGAACAA+TGG | - | chr3_1:4262597-4262616 | Msa0345140:intron | 30.0% | |
| ! | TTGACACAACATGTGAATTT+TGG | + | chr3_1:4262667-4262686 | None:intergenic | 30.0% |
| TGTGAATGTTGGAAATTACA+AGG | + | chr3_1:4262691-4262710 | None:intergenic | 30.0% | |
| !! | AATTTGGGGTTGATTTTTAG+TGG | - | chr3_1:4262745-4262764 | Msa0345140:CDS | 30.0% |
| TCAACAATGTTACTAGAGTA+AGG | - | chr3_1:4263037-4263056 | Msa0345140:CDS | 30.0% | |
| GGAAACTTTGTCTTAAAACT+AGG | - | chr3_1:4263058-4263077 | Msa0345140:CDS | 30.0% | |
| !! | ATTCTGGTGGATTTCAATTC+AGG | - | chr3_1:4262322-4262341 | Msa0345140:three_prime_UTR | 35.0% |
| TTTCCAACATTCACATCAGA+AGG | - | chr3_1:4262696-4262715 | Msa0345140:CDS | 35.0% | |
| AATCCTTCTGATGTGAATGT+TGG | + | chr3_1:4262702-4262721 | None:intergenic | 35.0% | |
| !! | GGTGCAAATGCATTTGATTT+TGG | - | chr3_1:4262790-4262809 | Msa0345140:CDS | 35.0% |
| GTCATGGAAAATAGCACAAA+AGG | - | chr3_1:4262909-4262928 | Msa0345140:CDS | 35.0% | |
| !! | AAGTTCAGCACTTTTGAAGA+AGG | - | chr3_1:4262942-4262961 | Msa0345140:CDS | 35.0% |
| ACCATAATTCAAAACAAGCC+TGG | - | chr3_1:4262973-4262992 | Msa0345140:CDS | 35.0% | |
| !!! | TCCAGGCTTGTTTTGAATTA+TGG | + | chr3_1:4262977-4262996 | None:intergenic | 35.0% |
| GAACATTTCAAAAGTTGGCT+TGG | + | chr3_1:4263453-4263472 | None:intergenic | 35.0% | |
| !! | ATTCTGGTGGATTTCAATTC+AGG | - | chr3_1:4262322-4262341 | Msa0345140:three_prime_UTR | 35.0% |
| TTTCCAACATTCACATCAGA+AGG | - | chr3_1:4262696-4262715 | Msa0345140:CDS | 35.0% | |
| AATCCTTCTGATGTGAATGT+TGG | + | chr3_1:4262702-4262721 | None:intergenic | 35.0% | |
| !! | GGTGCAAATGCATTTGATTT+TGG | - | chr3_1:4262790-4262809 | Msa0345140:CDS | 35.0% |
| GTCATGGAAAATAGCACAAA+AGG | - | chr3_1:4262909-4262928 | Msa0345140:CDS | 35.0% | |
| !! | AAGTTCAGCACTTTTGAAGA+AGG | - | chr3_1:4262942-4262961 | Msa0345140:CDS | 35.0% |
| ACCATAATTCAAAACAAGCC+TGG | - | chr3_1:4262973-4262992 | Msa0345140:CDS | 35.0% | |
| !!! | TCCAGGCTTGTTTTGAATTA+TGG | + | chr3_1:4262977-4262996 | None:intergenic | 35.0% |
| GAACATTTCAAAAGTTGGCT+TGG | + | chr3_1:4263453-4263472 | None:intergenic | 35.0% | |
| ! | TTAGTGGAGAGTGCATGTTT+AGG | - | chr3_1:4262761-4262780 | Msa0345140:CDS | 40.0% |
| ! | AGAGTGCATGTTTAGGACAA+AGG | - | chr3_1:4262768-4262787 | Msa0345140:CDS | 40.0% |
| ! | GAGTGCATGTTTAGGACAAA+GGG | - | chr3_1:4262769-4262788 | Msa0345140:CDS | 40.0% |
| CCTCTTCAACTGTTTGATCA+GGG | + | chr3_1:4262825-4262844 | None:intergenic | 40.0% | |
| AAAACAAGCCTGGAAGTGAA+AGG | - | chr3_1:4262983-4263002 | Msa0345140:CDS | 40.0% | |
| GAAGTGAAAGGTCACAGTTA+AGG | - | chr3_1:4262995-4263014 | Msa0345140:CDS | 40.0% | |
| TATGCAGCAAGAGATCATGA+TGG | - | chr3_1:4263181-4263200 | Msa0345140:intron | 40.0% | |
| GCGTTATGAGAACATTGTTG+TGG | - | chr3_1:4263219-4263238 | Msa0345140:intron | 40.0% | |
| ! | TTAGTGGAGAGTGCATGTTT+AGG | - | chr3_1:4262761-4262780 | Msa0345140:CDS | 40.0% |
| ! | AGAGTGCATGTTTAGGACAA+AGG | - | chr3_1:4262768-4262787 | Msa0345140:CDS | 40.0% |
| ! | GAGTGCATGTTTAGGACAAA+GGG | - | chr3_1:4262769-4262788 | Msa0345140:CDS | 40.0% |
| CCTCTTCAACTGTTTGATCA+GGG | + | chr3_1:4262825-4262844 | None:intergenic | 40.0% | |
| AAAACAAGCCTGGAAGTGAA+AGG | - | chr3_1:4262983-4263002 | Msa0345140:CDS | 40.0% | |
| GAAGTGAAAGGTCACAGTTA+AGG | - | chr3_1:4262995-4263014 | Msa0345140:CDS | 40.0% | |
| TATGCAGCAAGAGATCATGA+TGG | - | chr3_1:4263181-4263200 | Msa0345140:intron | 40.0% | |
| GCGTTATGAGAACATTGTTG+TGG | - | chr3_1:4263219-4263238 | Msa0345140:intron | 40.0% | |
| GGAAACAAGTGCGTCATGTT+GGG | + | chr3_1:4262646-4262665 | None:intergenic | 45.0% | |
| TGGAAACAAGTGCGTCATGT+TGG | + | chr3_1:4262647-4262666 | None:intergenic | 45.0% | |
| CCCTGATCAAACAGTTGAAG+AGG | - | chr3_1:4262822-4262841 | Msa0345140:CDS | 45.0% | |
| GCCTCTTCAACTGTTTGATC+AGG | + | chr3_1:4262826-4262845 | None:intergenic | 45.0% | |
| AACTGTGACCTTTCACTTCC+AGG | + | chr3_1:4262994-4263013 | None:intergenic | 45.0% | |
| !! | ATCATGATGGACCTGAAGTG+TGG | - | chr3_1:4263194-4263213 | Msa0345140:intron | 45.0% |
| GGAAACAAGTGCGTCATGTT+GGG | + | chr3_1:4262646-4262665 | None:intergenic | 45.0% | |
| TGGAAACAAGTGCGTCATGT+TGG | + | chr3_1:4262647-4262666 | None:intergenic | 45.0% | |
| CCCTGATCAAACAGTTGAAG+AGG | - | chr3_1:4262822-4262841 | Msa0345140:CDS | 45.0% | |
| GCCTCTTCAACTGTTTGATC+AGG | + | chr3_1:4262826-4262845 | None:intergenic | 45.0% | |
| AACTGTGACCTTTCACTTCC+AGG | + | chr3_1:4262994-4263013 | None:intergenic | 45.0% | |
| !! | ATCATGATGGACCTGAAGTG+TGG | - | chr3_1:4263194-4263213 | Msa0345140:intron | 45.0% |
| ! | GTGCGTCATGTTGGGTTGTA+AGG | + | chr3_1:4262638-4262657 | None:intergenic | 50.0% |
| TCATAACGCTGCCACACTTC+AGG | + | chr3_1:4263208-4263227 | None:intergenic | 50.0% | |
| ! | GTGCGTCATGTTGGGTTGTA+AGG | + | chr3_1:4262638-4262657 | None:intergenic | 50.0% |
| TCATAACGCTGCCACACTTC+AGG | + | chr3_1:4263208-4263227 | None:intergenic | 50.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_1 | gene | 4262168 | 4263540 | 4262168 | ID=Msa0345140;Name=Msa0345140 |
| chr3_1 | mRNA | 4262168 | 4263540 | 4262168 | ID=Msa0345140-mRNA-1;Parent=Msa0345140;Name=Msa0345140-mRNA-1;_AED=0.10;_eAED=0.10;_QI=268|1|1|1|0.5|0.33|3|270|177 |
| chr3_1 | exon | 4262168 | 4262533 | 4262168 | ID=Msa0345140-mRNA-1:exon:1348;Parent=Msa0345140-mRNA-1 |
| chr3_1 | exon | 4262655 | 4263109 | 4262655 | ID=Msa0345140-mRNA-1:exon:1347;Parent=Msa0345140-mRNA-1 |
| chr3_1 | exon | 4263290 | 4263540 | 4263290 | ID=Msa0345140-mRNA-1:exon:1346;Parent=Msa0345140-mRNA-1 |
| chr3_1 | five_prime_UTR | 4263290 | 4263540 | 4263290 | ID=Msa0345140-mRNA-1:five_prime_utr;Parent=Msa0345140-mRNA-1 |
| chr3_1 | five_prime_UTR | 4263093 | 4263109 | 4263093 | ID=Msa0345140-mRNA-1:five_prime_utr;Parent=Msa0345140-mRNA-1 |
| chr3_1 | CDS | 4262655 | 4263092 | 4262655 | ID=Msa0345140-mRNA-1:cds;Parent=Msa0345140-mRNA-1 |
| chr3_1 | CDS | 4262438 | 4262533 | 4262438 | ID=Msa0345140-mRNA-1:cds;Parent=Msa0345140-mRNA-1 |
| chr3_1 | three_prime_UTR | 4262168 | 4262437 | 4262168 | ID=Msa0345140-mRNA-1:three_prime_utr;Parent=Msa0345140-mRNA-1 |
| Gene Sequence |
| Protein sequence |
