Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0838560 | XP_024640934.1 | 96.916 | 227 | 7 | 0 | 1 | 227 | 1 | 227 | 5.84e-163 | 459 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0838560 | sp|Q93VH2|BBD2_ARATH | 38.462 | 182 | 105 | 4 | 41 | 217 | 137 | 316 | 6.99e-33 | 124 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0838560 | G7JYS6 | 96.916 | 227 | 7 | 0 | 1 | 227 | 100 | 326 | 8.95e-163 | 462 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0000220 | Msa0838560 | -0.826659 | 2.402374e-54 | -8.615850e-47 |
Msa0016830 | Msa0838560 | -0.829472 | 5.051804e-55 | -8.615850e-47 |
Msa0017980 | Msa0838560 | -0.818956 | 1.495589e-52 | -8.615850e-47 |
Msa0021710 | Msa0838560 | -0.845753 | 3.336012e-59 | -8.615850e-47 |
Msa0022960 | Msa0838560 | -0.805308 | 1.421397e-49 | -8.615850e-47 |
Msa0024320 | Msa0838560 | -0.808021 | 3.799539e-50 | -8.615850e-47 |
Msa0025340 | Msa0838560 | -0.815446 | 9.205435e-52 | -8.615850e-47 |
Msa0028450 | Msa0838560 | -0.812123 | 4.966718e-51 | -8.615850e-47 |
Msa0030710 | Msa0838560 | -0.838155 | 3.401679e-57 | -8.615850e-47 |
Msa0030760 | Msa0838560 | -0.813942 | 1.982591e-51 | -8.615850e-47 |
Msa0034800 | Msa0838560 | -0.831257 | 1.849603e-55 | -8.615850e-47 |
Msa0042500 | Msa0838560 | -0.812200 | 4.778717e-51 | -8.615850e-47 |
Msa0046090 | Msa0838560 | -0.815726 | 7.974752e-52 | -8.615850e-47 |
Msa0046700 | Msa0838560 | -0.827806 | 1.276592e-54 | -8.615850e-47 |
Msa0049670 | Msa0838560 | -0.809997 | 1.434734e-50 | -8.615850e-47 |
Msa0052550 | Msa0838560 | -0.812299 | 4.545656e-51 | -8.615850e-47 |
Msa0057740 | Msa0838560 | -0.802288 | 6.023916e-49 | -8.615850e-47 |
Msa0060370 | Msa0838560 | 0.802567 | 5.275735e-49 | -8.615850e-47 |
Msa0066990 | Msa0838560 | -0.801401 | 9.164345e-49 | -8.615850e-47 |
Msa0067820 | Msa0838560 | -0.803128 | 4.041024e-49 | -8.615850e-47 |
Msa0070580 | Msa0838560 | -0.811568 | 6.559964e-51 | -8.615850e-47 |
Msa0078170 | Msa0838560 | -0.810196 | 1.299959e-50 | -8.615850e-47 |
Msa0079550 | Msa0838560 | -0.801049 | 1.081384e-48 | -8.615850e-47 |
Msa0079570 | Msa0838560 | -0.818816 | 1.609086e-52 | -8.615850e-47 |
Msa0086620 | Msa0838560 | -0.820810 | 5.635473e-53 | -8.615850e-47 |
Msa0093830 | Msa0838560 | -0.803939 | 2.743400e-49 | -8.615850e-47 |
Msa0097490 | Msa0838560 | -0.810046 | 1.400293e-50 | -8.615850e-47 |
Msa0097730 | Msa0838560 | -0.814413 | 1.560576e-51 | -8.615850e-47 |
Msa0113910 | Msa0838560 | -0.814435 | 1.542666e-51 | -8.615850e-47 |
Msa0114960 | Msa0838560 | -0.833272 | 5.865970e-56 | -8.615850e-47 |
Msa0115950 | Msa0838560 | -0.820398 | 7.006747e-53 | -8.615850e-47 |
Msa0116950 | Msa0838560 | -0.836641 | 8.308118e-57 | -8.615850e-47 |
Msa0606680 | Msa0838560 | -0.806304 | 8.776881e-50 | -8.615850e-47 |
Msa0617010 | Msa0838560 | -0.832059 | 1.173444e-55 | -8.615850e-47 |
Msa0622800 | Msa0838560 | -0.837089 | 6.385028e-57 | -8.615850e-47 |
Msa0624360 | Msa0838560 | -0.803472 | 3.429756e-49 | -8.615850e-47 |
Msa0625550 | Msa0838560 | -0.810529 | 1.101899e-50 | -8.615850e-47 |
Msa0638550 | Msa0838560 | -0.805489 | 1.302287e-49 | -8.615850e-47 |
Msa0640780 | Msa0838560 | -0.810436 | 1.153817e-50 | -8.615850e-47 |
Msa0648410 | Msa0838560 | -0.822112 | 2.819814e-53 | -8.615850e-47 |
Msa0653370 | Msa0838560 | -0.822836 | 1.914072e-53 | -8.615850e-47 |
Msa0665010 | Msa0838560 | -0.816090 | 6.614051e-52 | -8.615850e-47 |
Msa0677110 | Msa0838560 | -0.813278 | 2.775072e-51 | -8.615850e-47 |
Msa0687320 | Msa0838560 | -0.834026 | 3.801572e-56 | -8.615850e-47 |
Msa0688760 | Msa0838560 | -0.816417 | 5.590188e-52 | -8.615850e-47 |
Msa0690920 | Msa0838560 | -0.810463 | 1.138513e-50 | -8.615850e-47 |
Msa0696600 | Msa0838560 | -0.812526 | 4.055753e-51 | -8.615850e-47 |
Msa0697230 | Msa0838560 | -0.812577 | 3.952391e-51 | -8.615850e-47 |
Msa0703620 | Msa0838560 | -0.801103 | 1.054477e-48 | -8.615850e-47 |
Msa0705670 | Msa0838560 | -0.807308 | 5.385482e-50 | -8.615850e-47 |
Msa0708840 | Msa0838560 | -0.809239 | 2.087323e-50 | -8.615850e-47 |
Msa0712580 | Msa0838560 | -0.800535 | 1.377237e-48 | -8.615850e-47 |
Msa0712920 | Msa0838560 | 0.862835 | 3.824055e-64 | -8.615850e-47 |
Msa0716600 | Msa0838560 | 0.800636 | 1.313609e-48 | -8.615850e-47 |
Msa0729590 | Msa0838560 | -0.834698 | 2.579270e-56 | -8.615850e-47 |
Msa0730250 | Msa0838560 | -0.805058 | 1.603151e-49 | -8.615850e-47 |
Msa0741600 | Msa0838560 | -0.802088 | 6.621963e-49 | -8.615850e-47 |
Msa0742690 | Msa0838560 | -0.832429 | 9.500188e-56 | -8.615850e-47 |
Msa0747900 | Msa0838560 | -0.802665 | 5.038106e-49 | -8.615850e-47 |
Msa0748470 | Msa0838560 | -0.804147 | 2.483487e-49 | -8.615850e-47 |
Msa0749160 | Msa0838560 | -0.812042 | 5.173466e-51 | -8.615850e-47 |
Msa0756570 | Msa0838560 | 0.802807 | 4.707124e-49 | -8.615850e-47 |
Msa0768240 | Msa0838560 | -0.818545 | 1.853945e-52 | -8.615850e-47 |
Msa0779830 | Msa0838560 | -0.816070 | 6.682954e-52 | -8.615850e-47 |
Msa0797950 | Msa0838560 | 0.813128 | 2.994399e-51 | -8.615850e-47 |
Msa0807840 | Msa0838560 | -0.814658 | 1.377437e-51 | -8.615850e-47 |
Msa0822800 | Msa0838560 | -0.804007 | 2.656416e-49 | -8.615850e-47 |
Msa0827560 | Msa0838560 | -0.833404 | 5.437904e-56 | -8.615850e-47 |
Msa0833910 | Msa0838560 | -0.835961 | 1.236625e-56 | -8.615850e-47 |
Msa0834160 | Msa0838560 | -0.824665 | 7.137014e-54 | -8.615850e-47 |
Msa0838560 | Msa0862750 | -0.832162 | 1.106182e-55 | -8.615850e-47 |
Msa0838560 | Msa0872800 | -0.841320 | 5.103716e-58 | -8.615850e-47 |
Msa0838560 | Msa0880200 | -0.804883 | 1.744542e-49 | -8.615850e-47 |
Msa0838560 | Msa0880370 | -0.801499 | 8.747321e-49 | -8.615850e-47 |
Msa0838560 | Msa0883880 | -0.819959 | 8.832598e-53 | -8.615850e-47 |
Msa0838560 | Msa0926090 | -0.801424 | 9.063858e-49 | -8.615850e-47 |
Msa0838560 | Msa0928840 | -0.821571 | 3.762173e-53 | -8.615850e-47 |
Msa0838560 | Msa0930150 | -0.800260 | 1.566488e-48 | -8.615850e-47 |
Msa0838560 | Msa0932040 | -0.816091 | 6.611900e-52 | -8.615850e-47 |
Msa0838560 | Msa0946570 | -0.808977 | 2.375591e-50 | -8.615850e-47 |
Msa0838560 | Msa0948820 | -0.806724 | 7.156735e-50 | -8.615850e-47 |
Msa0838560 | Msa0961200 | -0.815638 | 8.344185e-52 | -8.615850e-47 |
Msa0838560 | Msa0967260 | -0.808187 | 3.502405e-50 | -8.615850e-47 |
Msa0838560 | Msa0967920 | -0.822966 | 1.784721e-53 | -8.615850e-47 |
Msa0838560 | Msa0968970 | -0.807511 | 4.877769e-50 | -8.615850e-47 |
Msa0838560 | Msa0970120 | -0.803376 | 3.590032e-49 | -8.615850e-47 |
Msa0838560 | Msa0970160 | -0.822476 | 2.321618e-53 | -8.615850e-47 |
Msa0838560 | Msa0974410 | -0.814081 | 1.847192e-51 | -8.615850e-47 |
Msa0838560 | Msa0985570 | -0.812435 | 4.246215e-51 | -8.615850e-47 |
Msa0838560 | Msa1021600 | -0.807366 | 5.235319e-50 | -8.615850e-47 |
Msa0838560 | Msa1033460 | -0.806728 | 7.146222e-50 | -8.615850e-47 |
Msa0838560 | Msa1039150 | -0.800696 | 1.276835e-48 | -8.615850e-47 |
Msa0838560 | Msa1066790 | -0.809763 | 1.610978e-50 | -8.615850e-47 |
Msa0838560 | Msa1066980 | -0.808748 | 2.658800e-50 | -8.615850e-47 |
Msa0838560 | Msa1071380 | -0.805510 | 1.289349e-49 | -8.615850e-47 |
Msa0838560 | Msa1073140 | -0.823711 | 1.195457e-53 | -8.615850e-47 |
Msa0838560 | Msa1083660 | -0.815032 | 1.137678e-51 | -8.615850e-47 |
Msa0838560 | Msa1084630 | -0.804620 | 1.979774e-49 | -8.615850e-47 |
Msa0838560 | Msa1095880 | -0.803626 | 3.186304e-49 | -8.615850e-47 |
Msa0838560 | Msa1104430 | -0.801677 | 8.044395e-49 | -8.615850e-47 |
Msa0838560 | Msa1105680 | -0.816063 | 6.708975e-52 | -8.615850e-47 |
Msa0838560 | Msa1111850 | -0.829810 | 4.180405e-55 | -8.615850e-47 |
Msa0838560 | Msa1126980 | -0.814229 | 1.713638e-51 | -8.615850e-47 |
Msa0838560 | Msa1128850 | -0.826223 | 3.051537e-54 | -8.615850e-47 |
Msa0838560 | Msa1130070 | -0.826591 | 2.494864e-54 | -8.615850e-47 |
Msa0838560 | Msa1136770 | -0.814764 | 1.304601e-51 | -8.615850e-47 |
Msa0838560 | Msa1144420 | -0.852504 | 4.419316e-61 | -8.615850e-47 |
Msa0838560 | Msa1145070 | -0.800439 | 1.440499e-48 | -8.615850e-47 |
Msa0838560 | Msa1154250 | -0.812702 | 3.711124e-51 | -8.615850e-47 |
Msa0838560 | Msa1160470 | -0.806961 | 6.380078e-50 | -8.615850e-47 |
Msa0838560 | Msa1165860 | 0.801079 | 1.066446e-48 | -8.615850e-47 |
Msa0838560 | Msa1166020 | -0.817540 | 3.127716e-52 | -8.615850e-47 |
Msa0838560 | Msa1173410 | -0.805624 | 1.220049e-49 | -8.615850e-47 |
Msa0838560 | Msa1182960 | -0.803167 | 3.967656e-49 | -8.615850e-47 |
Msa0838560 | Msa1190300 | -0.802022 | 6.831996e-49 | -8.615850e-47 |
Msa0838560 | Msa1190320 | -0.809477 | 1.856345e-50 | -8.615850e-47 |
Msa0838560 | Msa1197210 | -0.814945 | 1.189742e-51 | -8.615850e-47 |
Msa0838560 | Msa1198280 | -0.828063 | 1.107228e-54 | -8.615850e-47 |
Msa0838560 | Msa1198420 | -0.841221 | 5.419801e-58 | -8.615850e-47 |
Msa0838560 | Msa1199690 | -0.818554 | 1.845268e-52 | -8.615850e-47 |
Msa0838560 | Msa1203090 | -0.805100 | 1.570987e-49 | -8.615850e-47 |
Msa0838560 | Msa1207660 | -0.826534 | 2.573913e-54 | -8.615850e-47 |
Msa0838560 | Msa1207770 | -0.822764 | 1.989180e-53 | -8.615850e-47 |
Msa0838560 | Msa1209390 | -0.808427 | 3.114193e-50 | -8.615850e-47 |
Msa0838560 | Msa1209650 | -0.822923 | 1.826894e-53 | -8.615850e-47 |
Msa0838560 | Msa1215660 | -0.827117 | 1.867654e-54 | -8.615850e-47 |
Msa0838560 | Msa1220290 | -0.811029 | 8.586579e-51 | -8.615850e-47 |
Msa0838560 | Msa1220390 | -0.831928 | 1.263823e-55 | -8.615850e-47 |
Msa0838560 | Msa1224310 | -0.801308 | 9.575199e-49 | -8.615850e-47 |
Msa0838560 | Msa1225240 | -0.804040 | 2.614474e-49 | -8.615850e-47 |
Msa0838560 | Msa1236090 | -0.808342 | 3.246015e-50 | -8.615850e-47 |
Msa0838560 | Msa1249740 | -0.800510 | 1.393647e-48 | -8.615850e-47 |
Msa0838560 | Msa1251890 | -0.805848 | 1.094976e-49 | -8.615850e-47 |
Msa0838560 | Msa1251960 | -0.812676 | 3.760910e-51 | -8.615850e-47 |
Msa0838560 | Msa1257860 | -0.811189 | 7.930503e-51 | -8.615850e-47 |
Msa0838560 | Msa1263970 | -0.801591 | 8.377787e-49 | -8.615850e-47 |
Msa0838560 | Msa1265900 | -0.840540 | 8.179326e-58 | -8.615850e-47 |
Msa0838560 | Msa1267800 | -0.827467 | 1.539782e-54 | -8.615850e-47 |
Msa0838560 | Msa1272770 | -0.806523 | 7.891307e-50 | -8.615850e-47 |
Msa0838560 | Msa1279240 | -0.821814 | 3.305987e-53 | -8.615850e-47 |
Msa0838560 | Msa1285870 | -0.808846 | 2.534128e-50 | -8.615850e-47 |
Msa0838560 | Msa1295220 | -0.808448 | 3.082086e-50 | -8.615850e-47 |
Msa0838560 | Msa1301410 | -0.831879 | 1.299711e-55 | -8.615850e-47 |
Msa0838560 | Msa1303470 | -0.834607 | 2.718233e-56 | -8.615850e-47 |
Msa0838560 | Msa1317340 | -0.823838 | 1.116392e-53 | -8.615850e-47 |
Msa0838560 | Msa1320660 | -0.835234 | 1.889319e-56 | -8.615850e-47 |
Msa0838560 | Msa1331530 | -0.814299 | 1.653251e-51 | -8.615850e-47 |
Msa0838560 | Msa1331900 | -0.813731 | 2.206287e-51 | -8.615850e-47 |
Msa0838560 | Msa1335130 | -0.816004 | 6.913723e-52 | -8.615850e-47 |
Msa0838560 | Msa1335500 | 0.827739 | 1.324631e-54 | -8.615850e-47 |
Msa0838560 | Msa1341590 | -0.800723 | 1.260512e-48 | -8.615850e-47 |
Msa0838560 | Msa1345490 | -0.816303 | 5.927642e-52 | -8.615850e-47 |
Msa0838560 | Msa1349490 | -0.805627 | 1.218565e-49 | -8.615850e-47 |
Msa0838560 | Msa1356500 | -0.819336 | 1.225133e-52 | -8.615850e-47 |
Msa0838560 | Msa1361090 | -0.805597 | 1.236322e-49 | -8.615850e-47 |
Msa0838560 | Msa1366400 | -0.818365 | 2.036330e-52 | -8.615850e-47 |
Msa0838560 | Msa1374210 | -0.818621 | 1.781938e-52 | -8.615850e-47 |
Msa0838560 | Msa1374610 | -0.822235 | 2.640468e-53 | -8.615850e-47 |
Msa0838560 | Msa1381300 | -0.814110 | 1.819940e-51 | -8.615850e-47 |
Msa0838560 | Msa1388070 | -0.829868 | 4.046203e-55 | -8.615850e-47 |
Msa0838560 | Msa1392570 | -0.832152 | 1.112547e-55 | -8.615850e-47 |
Msa0838560 | Msa1393350 | -0.811277 | 7.587668e-51 | -8.615850e-47 |
Msa0838560 | Msa1396310 | -0.819247 | 1.284146e-52 | -8.615850e-47 |
Msa0838560 | Msa1400330 | -0.806230 | 9.101306e-50 | -8.615850e-47 |
Msa0838560 | Msa1400600 | -0.825733 | 3.991107e-54 | -8.615850e-47 |
Msa0838560 | Msa1403820 | -0.806765 | 7.016079e-50 | -8.615850e-47 |
Msa0838560 | Msa1414000 | -0.800493 | 1.404403e-48 | -8.615850e-47 |
Msa0838560 | Msa1426690 | -0.810505 | 1.115092e-50 | -8.615850e-47 |
Msa0838560 | Msa1432350 | -0.816916 | 4.321357e-52 | -8.615850e-47 |
Msa0838560 | Msa1433060 | -0.800884 | 1.169041e-48 | -8.615850e-47 |
Msa0838560 | Msa1448410 | -0.834792 | 2.441916e-56 | -8.615850e-47 |
Msa0123680 | Msa0838560 | -0.804983 | 1.662578e-49 | -8.615850e-47 |
Msa0124070 | Msa0838560 | -0.805560 | 1.258508e-49 | -8.615850e-47 |
Msa0129270 | Msa0838560 | 0.811833 | 5.743638e-51 | -8.615850e-47 |
Msa0143950 | Msa0838560 | 0.810149 | 1.330797e-50 | -8.615850e-47 |
Msa0144000 | Msa0838560 | 0.806102 | 9.682266e-50 | -8.615850e-47 |
Msa0160080 | Msa0838560 | -0.813848 | 2.078872e-51 | -8.615850e-47 |
Msa0160470 | Msa0838560 | -0.859009 | 5.562806e-63 | -8.615850e-47 |
Msa0163400 | Msa0838560 | -0.819022 | 1.444813e-52 | -8.615850e-47 |
Msa0168470 | Msa0838560 | -0.802482 | 5.494472e-49 | -8.615850e-47 |
Msa0170550 | Msa0838560 | -0.807911 | 4.011079e-50 | -8.615850e-47 |
Msa0170730 | Msa0838560 | -0.823305 | 1.487918e-53 | -8.615850e-47 |
Msa0184120 | Msa0838560 | -0.800321 | 1.522348e-48 | -8.615850e-47 |
Msa0184320 | Msa0838560 | 0.843713 | 1.183217e-58 | -8.615850e-47 |
Msa0186380 | Msa0838560 | -0.813983 | 1.941425e-51 | -8.615850e-47 |
Msa0186750 | Msa0838560 | -0.826954 | 2.042393e-54 | -8.615850e-47 |
Msa0213020 | Msa0838560 | -0.800894 | 1.163515e-48 | -8.615850e-47 |
Msa0219720 | Msa0838560 | -0.843145 | 1.677412e-58 | -8.615850e-47 |
Msa0227970 | Msa0838560 | -0.815994 | 6.949742e-52 | -8.615850e-47 |
Msa0228360 | Msa0838560 | -0.817265 | 3.606199e-52 | -8.615850e-47 |
Msa0237440 | Msa0838560 | -0.811522 | 6.712029e-51 | -8.615850e-47 |
Msa0367600 | Msa0838560 | -0.811326 | 7.404863e-51 | -8.615850e-47 |
Msa0369430 | Msa0838560 | -0.809541 | 1.798107e-50 | -8.615850e-47 |
Msa0372550 | Msa0838560 | -0.821872 | 3.204650e-53 | -8.615850e-47 |
Msa0377690 | Msa0838560 | -0.831604 | 1.519026e-55 | -8.615850e-47 |
Msa0378530 | Msa0838560 | -0.813546 | 2.423109e-51 | -8.615850e-47 |
Msa0379890 | Msa0838560 | -0.805783 | 1.129671e-49 | -8.615850e-47 |
Msa0379900 | Msa0838560 | -0.806281 | 8.876115e-50 | -8.615850e-47 |
Msa0379950 | Msa0838560 | -0.823500 | 1.339638e-53 | -8.615850e-47 |
Msa0384150 | Msa0838560 | -0.804748 | 1.861330e-49 | -8.615850e-47 |
Msa0385870 | Msa0838560 | -0.815516 | 8.882323e-52 | -8.615850e-47 |
Msa0386390 | Msa0838560 | -0.802303 | 5.980841e-49 | -8.615850e-47 |
Msa0389890 | Msa0838560 | -0.804673 | 1.929295e-49 | -8.615850e-47 |
Msa0403670 | Msa0838560 | -0.821465 | 3.979721e-53 | -8.615850e-47 |
Msa0404860 | Msa0838560 | -0.811002 | 8.703438e-51 | -8.615850e-47 |
Msa0404880 | Msa0838560 | -0.825856 | 3.731699e-54 | -8.615850e-47 |
Msa0405040 | Msa0838560 | -0.826194 | 3.101741e-54 | -8.615850e-47 |
Msa0415210 | Msa0838560 | -0.813322 | 2.714245e-51 | -8.615850e-47 |
Msa0426680 | Msa0838560 | -0.827620 | 1.415015e-54 | -8.615850e-47 |
Msa0427890 | Msa0838560 | -0.800152 | 1.648021e-48 | -8.615850e-47 |
Msa0449030 | Msa0838560 | -0.801227 | 9.944454e-49 | -8.615850e-47 |
Msa0474220 | Msa0838560 | -0.820725 | 5.892915e-53 | -8.615850e-47 |
Msa0475080 | Msa0838560 | -0.818314 | 2.091020e-52 | -8.615850e-47 |
Msa0475700 | Msa0838560 | -0.802757 | 4.820415e-49 | -8.615850e-47 |
Msa0479790 | Msa0838560 | -0.802702 | 4.949144e-49 | -8.615850e-47 |
Msa0481580 | Msa0838560 | -0.820299 | 7.379764e-53 | -8.615850e-47 |
Msa0482020 | Msa0838560 | -0.811228 | 7.776375e-51 | -8.615850e-47 |
Msa0243160 | Msa0838560 | -0.807114 | 5.919718e-50 | -8.615850e-47 |
Msa0244030 | Msa0838560 | 0.806798 | 6.904563e-50 | -8.615850e-47 |
Msa0260930 | Msa0838560 | -0.819071 | 1.407590e-52 | -8.615850e-47 |
Msa0261020 | Msa0838560 | -0.812566 | 3.975867e-51 | -8.615850e-47 |
Msa0266120 | Msa0838560 | -0.817296 | 3.549941e-52 | -8.615850e-47 |
Msa0284980 | Msa0838560 | -0.802446 | 5.588786e-49 | -8.615850e-47 |
Msa0285200 | Msa0838560 | -0.800925 | 1.146412e-48 | -8.615850e-47 |
Msa0285510 | Msa0838560 | -0.836820 | 7.478580e-57 | -8.615850e-47 |
Msa0292150 | Msa0838560 | -0.821132 | 4.750198e-53 | -8.615850e-47 |
Msa0292300 | Msa0838560 | -0.802240 | 6.162126e-49 | -8.615850e-47 |
Msa0293060 | Msa0838560 | -0.808459 | 3.064876e-50 | -8.615850e-47 |
Msa0304040 | Msa0838560 | -0.809572 | 1.771268e-50 | -8.615850e-47 |
Msa0330370 | Msa0838560 | -0.814323 | 1.633244e-51 | -8.615850e-47 |
Msa0335860 | Msa0838560 | -0.830450 | 2.916756e-55 | -8.615850e-47 |
Msa0336550 | Msa0838560 | -0.837557 | 4.845563e-57 | -8.615850e-47 |
Msa0341710 | Msa0838560 | -0.803100 | 4.096053e-49 | -8.615850e-47 |
Msa0355590 | Msa0838560 | -0.801176 | 1.018535e-48 | -8.615850e-47 |
Msa0483090 | Msa0838560 | -0.834769 | 2.474206e-56 | -8.615850e-47 |
Msa0483410 | Msa0838560 | -0.814956 | 1.183222e-51 | -8.615850e-47 |
Msa0484240 | Msa0838560 | 0.853538 | 2.237070e-61 | -8.615850e-47 |
Msa0490740 | Msa0838560 | -0.808052 | 3.742110e-50 | -8.615850e-47 |
Msa0493430 | Msa0838560 | -0.805531 | 1.276276e-49 | -8.615850e-47 |
Msa0498070 | Msa0838560 | -0.808582 | 2.885868e-50 | -8.615850e-47 |
Msa0508660 | Msa0838560 | -0.800377 | 1.482800e-48 | -8.615850e-47 |
Msa0513660 | Msa0838560 | -0.832158 | 1.108565e-55 | -8.615850e-47 |
Msa0516340 | Msa0838560 | -0.809680 | 1.679002e-50 | -8.615850e-47 |
Msa0522810 | Msa0838560 | -0.805690 | 1.181831e-49 | -8.615850e-47 |
Msa0523400 | Msa0838560 | -0.809564 | 1.778061e-50 | -8.615850e-47 |
Msa0528170 | Msa0838560 | -0.814814 | 1.272185e-51 | -8.615850e-47 |
Msa0550770 | Msa0838560 | -0.813473 | 2.514413e-51 | -8.615850e-47 |
Msa0550800 | Msa0838560 | -0.818855 | 1.576558e-52 | -8.615850e-47 |
Msa0554700 | Msa0838560 | -0.801949 | 7.072296e-49 | -8.615850e-47 |
Msa0559440 | Msa0838560 | -0.806540 | 7.828786e-50 | -8.615850e-47 |
Msa0560010 | Msa0838560 | -0.810069 | 1.384453e-50 | -8.615850e-47 |
Msa0571220 | Msa0838560 | -0.829329 | 5.472597e-55 | -8.615850e-47 |
Msa0574230 | Msa0838560 | -0.810333 | 1.214604e-50 | -8.615850e-47 |
Msa0576510 | Msa0838560 | -0.801007 | 1.103376e-48 | -8.615850e-47 |
Msa0577960 | Msa0838560 | -0.811272 | 7.607982e-51 | -8.615850e-47 |
Msa0581190 | Msa0838560 | -0.814982 | 1.167343e-51 | -8.615850e-47 |
Msa0581490 | Msa0838560 | -0.818474 | 1.923186e-52 | -8.615850e-47 |
Msa0587060 | Msa0838560 | -0.812695 | 3.725282e-51 | -8.615850e-47 |
Msa0588600 | Msa0838560 | -0.800414 | 1.457619e-48 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0838560 | MtrunA17_Chr5g0406211 | 96.916 | 227 | 7 | 0 | 1 | 227 | 100 | 326 | 1.72e-166 | 462 |
Msa0838560 | MtrunA17_Chr3g0141831 | 36.559 | 186 | 111 | 4 | 41 | 221 | 130 | 313 | 9.25e-33 | 120 |
Msa0838560 | MtrunA17_Chr1g0155531 | 34.946 | 186 | 114 | 4 | 41 | 221 | 133 | 316 | 4.87e-29 | 110 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0838560 | AT5G66050.2 | 52.632 | 228 | 103 | 3 | 1 | 224 | 5 | 231 | 1.65e-81 | 244 |
Msa0838560 | AT5G66050.1 | 52.632 | 228 | 103 | 3 | 1 | 224 | 99 | 325 | 2.67e-80 | 244 |
Msa0838560 | AT5G66050.3 | 52.423 | 227 | 103 | 3 | 1 | 223 | 99 | 324 | 8.96e-80 | 242 |
Msa0838560 | AT5G66050.4 | 51.675 | 209 | 96 | 3 | 1 | 205 | 99 | 306 | 1.82e-70 | 218 |
Msa0838560 | AT1G19660.2 | 38.462 | 182 | 105 | 4 | 41 | 217 | 137 | 316 | 7.11e-34 | 124 |
Msa0838560 | AT1G19660.1 | 38.462 | 182 | 105 | 4 | 41 | 217 | 137 | 316 | 7.11e-34 | 124 |
Msa0838560 | AT1G75380.3 | 37.097 | 186 | 110 | 4 | 41 | 221 | 133 | 316 | 9.51e-33 | 121 |
Msa0838560 | AT1G75380.1 | 37.097 | 186 | 110 | 4 | 41 | 221 | 133 | 316 | 9.51e-33 | 121 |
Msa0838560 | AT1G75380.4 | 37.097 | 186 | 110 | 4 | 41 | 221 | 133 | 316 | 9.51e-33 | 121 |
Msa0838560 | AT1G75380.2 | 37.097 | 186 | 110 | 4 | 41 | 221 | 133 | 316 | 9.51e-33 | 121 |
Msa0838560 | AT1G19660.3 | 36.364 | 176 | 105 | 4 | 41 | 211 | 137 | 310 | 1.16e-28 | 110 |
Find 81 sgRNAs with CRISPR-Local
Find 199 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TTTAAGTAATTCAAAATTTC+AGG | 0.158051 | 5_4:-12957074 | None:intergenic |
GCATTTATTTGCAACATTAA+TGG | 0.190657 | 5_4:-12958448 | None:intergenic |
TGAGGAAGGATTTGGGTTTA+TGG | 0.190859 | 5_4:-12956359 | None:intergenic |
ATTTCTTTACTTACATATAT+TGG | 0.231030 | 5_4:-12958738 | None:intergenic |
ACATGAAATGAGGAAGGATT+TGG | 0.264528 | 5_4:-12956367 | None:intergenic |
TTTACTCTTTCAGGTGATAA+TGG | 0.294692 | 5_4:+12958237 | Msa0838560:intron |
GTTATGATGATCGCTGAAAT+TGG | 0.303922 | 5_4:-12956409 | None:intergenic |
AGTTCTTGAGCTACCGAATC+TGG | 0.317594 | 5_4:-12958987 | None:intergenic |
TCATCTCAGGAGCACTAATT+AGG | 0.325608 | 5_4:+12959248 | Msa0838560:exon |
TTATCAAATCAAATGTATTA+AGG | 0.330207 | 5_4:+12959554 | Msa0838560:three_prime_UTR |
CAACTAGGTTATTCACAAAC+TGG | 0.340562 | 5_4:-12957549 | None:intergenic |
AATGAAGAAGATGAAGATAA+AGG | 0.356660 | 5_4:-12956148 | None:intergenic |
TACCGAATCTGGACCATCTA+TGG | 0.358074 | 5_4:-12958976 | None:intergenic |
TATGTTCTGCCCATTGTTGT+AGG | 0.358421 | 5_4:+12957285 | Msa0838560:CDS |
GGAGCACTAATTAGGTTGTT+AGG | 0.368218 | 5_4:+12959256 | Msa0838560:exon |
CATGAAATGAGGAAGGATTT+GGG | 0.368700 | 5_4:-12956366 | None:intergenic |
TGGAGAAGAGGGAGGTGAAT+GGG | 0.376687 | 5_4:-12956318 | None:intergenic |
GGGCAGAGTGCATAATAAAA+AGG | 0.382577 | 5_4:+12958797 | Msa0838560:CDS |
ATGGAGAAGAGGGAGGTGAA+TGG | 0.392668 | 5_4:-12956319 | None:intergenic |
TTTATGATGTATTGCTTGAC+AGG | 0.409824 | 5_4:+12958823 | Msa0838560:CDS |
GGTTATTCACAAACTGGAAC+TGG | 0.445405 | 5_4:-12957543 | None:intergenic |
GTTTGTTACAGTGCCATAGA+TGG | 0.457604 | 5_4:+12958963 | Msa0838560:intron |
ATGGTGGTGGCGCCAGTGAT+CGG | 0.464920 | 5_4:-12956228 | None:intergenic |
GGTGGCGGCATTTGTGTGAT+CGG | 0.464935 | 5_4:-12956256 | None:intergenic |
GAAGCTTCTATTCTTCTCTC+AGG | 0.465319 | 5_4:+12956459 | Msa0838560:five_prime_UTR |
GGAAGCGAGAGCGACGAGAA+TGG | 0.466057 | 5_4:-12956338 | None:intergenic |
TGCCATAGATGGTCCAGATT+CGG | 0.469346 | 5_4:+12958974 | Msa0838560:CDS |
TGCCATATTGCAGGATTGGC+CGG | 0.472759 | 5_4:+12957519 | Msa0838560:intron |
AGAAACGGAGCGGGAGGTGG+CGG | 0.475931 | 5_4:-12956271 | None:intergenic |
TTAAGTAATTCAAAATTTCA+GGG | 0.480298 | 5_4:-12957073 | None:intergenic |
CATGATCTAGTCTTTCAACT+AGG | 0.480955 | 5_4:-12957564 | None:intergenic |
ATATATACAAGCTAAGGTTA+AGG | 0.484532 | 5_4:-12959528 | None:intergenic |
GTATTAAGGCCTAAAACCTC+TGG | 0.487236 | 5_4:+12959568 | Msa0838560:three_prime_UTR |
GAGAGAGTGAGAAACGGAGC+GGG | 0.489568 | 5_4:-12956280 | None:intergenic |
ATAAGACTCGGCTATGGAAT+GGG | 0.490306 | 5_4:+12958777 | Msa0838560:CDS |
GTGAGAAACGGAGCGGGAGG+TGG | 0.492662 | 5_4:-12956274 | None:intergenic |
TATAAGACTCGGCTATGGAA+TGG | 0.494787 | 5_4:+12958776 | Msa0838560:CDS |
GCATACATACCTACAACAAT+GGG | 0.495198 | 5_4:-12957294 | None:intergenic |
TGCAACATTAATGGCATCTG+AGG | 0.495726 | 5_4:-12958439 | None:intergenic |
AGCATACATACCTACAACAA+TGG | 0.501223 | 5_4:-12957295 | None:intergenic |
AGCGACGAGAATGGAGAAGA+GGG | 0.502328 | 5_4:-12956329 | None:intergenic |
TTCTCCATCCAACCGATCAC+TGG | 0.507381 | 5_4:+12956216 | Msa0838560:five_prime_UTR |
TCAGGGATTCATACACATCA+TGG | 0.512511 | 5_4:-12957056 | None:intergenic |
TTCACAAACTGGAACTGGTC+CGG | 0.513315 | 5_4:-12957538 | None:intergenic |
TTTCTCAAGATTTCTTGTGA+TGG | 0.525235 | 5_4:+12957258 | Msa0838560:CDS |
AAATCTTCGTAAATCATCTC+AGG | 0.525481 | 5_4:+12959235 | Msa0838560:CDS |
GAAAAGTGATATTATTAGTG+TGG | 0.530123 | 5_4:+12958407 | Msa0838560:CDS |
GCAGAAACAATAGCACACTA+TGG | 0.532405 | 5_4:+12957102 | Msa0838560:five_prime_UTR |
AAGAAGATGAAGATAAAGGT+TGG | 0.538027 | 5_4:-12956144 | None:intergenic |
TACCTGGCTGAGGTACAATC+TGG | 0.538203 | 5_4:-12958296 | None:intergenic |
ATTTGTGTGATCGGTGGTGA+TGG | 0.540250 | 5_4:-12956247 | None:intergenic |
TGCCAGATTGTACCTCAGCC+AGG | 0.542240 | 5_4:+12958294 | Msa0838560:CDS |
GGCGCCAGTGATCGGTTGGA+TGG | 0.544976 | 5_4:-12956220 | None:intergenic |
TGAATTACATGAAATGAGGA+AGG | 0.546750 | 5_4:-12956373 | None:intergenic |
GACGCTATAAGACTCGGCTA+TGG | 0.548905 | 5_4:+12958771 | Msa0838560:CDS |
GCAACATTAATGGCATCTGA+GGG | 0.557171 | 5_4:-12958438 | None:intergenic |
GAGCGACGAGAATGGAGAAG+AGG | 0.569903 | 5_4:-12956330 | None:intergenic |
GAAGGAGAGAGAGTGAGAAA+CGG | 0.571740 | 5_4:-12956286 | None:intergenic |
TCCAGAAAATAGCTCGAGAA+GGG | 0.576030 | 5_4:+12957182 | Msa0838560:CDS |
GAGATGAATTACATGAAATG+AGG | 0.577670 | 5_4:-12956377 | None:intergenic |
TAATATATATATACAAGCTA+AGG | 0.580612 | 5_4:-12959534 | None:intergenic |
AGAGTGAGAAACGGAGCGGG+AGG | 0.584013 | 5_4:-12956277 | None:intergenic |
GTGATCGGTGGTGATGGTGG+TGG | 0.588642 | 5_4:-12956241 | None:intergenic |
TATGCATTTAGCTATCAAGC+AGG | 0.596160 | 5_4:+12959025 | Msa0838560:CDS |
ATAGTAGTTTATTCAGACAA+GGG | 0.597464 | 5_4:+12957205 | Msa0838560:CDS |
TTCACAGACGCTATAAGACT+CGG | 0.599122 | 5_4:+12958765 | Msa0838560:CDS |
TAATGTTGCAAATAAATGCA+AGG | 0.602512 | 5_4:+12958452 | Msa0838560:CDS |
TGGTGGCGCCAGTGATCGGT+TGG | 0.603712 | 5_4:-12956224 | None:intergenic |
TTCCAGAAAATAGCTCGAGA+AGG | 0.604172 | 5_4:+12957181 | Msa0838560:CDS |
CAATAGCACACTATGGAATG+TGG | 0.604628 | 5_4:+12957109 | Msa0838560:exon |
GATAGTAGTTTATTCAGACA+AGG | 0.606215 | 5_4:+12957204 | Msa0838560:CDS |
CAGGAAAGATTTAATGACGC+AGG | 0.608205 | 5_4:+12959044 | Msa0838560:CDS |
AAGATGAAGATAAAGGTTGG+TGG | 0.618582 | 5_4:-12956141 | None:intergenic |
GTGAATGGGAGAGAAATCGA+AGG | 0.630745 | 5_4:-12956304 | None:intergenic |
AAGTTGCCAATACCTGGCTG+AGG | 0.635842 | 5_4:-12958306 | None:intergenic |
TGTGTGATCGGTGGTGATGG+TGG | 0.638153 | 5_4:-12956244 | None:intergenic |
CAACATTAATGGCATCTGAG+GGG | 0.647803 | 5_4:-12958437 | None:intergenic |
GGCGGCATTTGTGTGATCGG+TGG | 0.654425 | 5_4:-12956253 | None:intergenic |
AGAGAGAGTGAGAAACGGAG+CGG | 0.655368 | 5_4:-12956281 | None:intergenic |
GACGAGAATGGAGAAGAGGG+AGG | 0.677739 | 5_4:-12956326 | None:intergenic |
TGAAGTGGAACAAGAGATCG+AGG | 0.688028 | 5_4:+12957426 | Msa0838560:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | AAGAAATTTTGATTTTTTAA+AGG | + | chr5_4:12958499-12958518 | Msa0838560:intron | 10.0% |
!!! | AGAAATTTTGATTTTTTAAA+GGG | + | chr5_4:12958500-12958519 | Msa0838560:intron | 10.0% |
!!! | AAGAAATTTTGATTTTTTAA+AGG | + | chr5_4:12958499-12958518 | Msa0838560:intron | 10.0% |
!!! | AGAAATTTTGATTTTTTAAA+GGG | + | chr5_4:12958500-12958519 | Msa0838560:intron | 10.0% |
!!! | TTATTTTTACTAGCTTATAA+CGG | - | chr5_4:12956832-12956851 | None:intergenic | 15.0% |
!! | TTAAGTAATTCAAAATTTCA+GGG | - | chr5_4:12957076-12957095 | None:intergenic | 15.0% |
!! | TTTAAGTAATTCAAAATTTC+AGG | - | chr5_4:12957077-12957096 | None:intergenic | 15.0% |
!!! | GAAATTTTGATTTTTTAAAG+GGG | + | chr5_4:12958501-12958520 | Msa0838560:intron | 15.0% |
!!! | GAAATTTTGATTTTTTAAAG+GGG | + | chr5_4:12958501-12958520 | Msa0838560:intron | 15.0% |
!! | CAAATATAAAAATCATAAAG+AGG | - | chr5_4:12958705-12958724 | None:intergenic | 15.0% |
!! | ATTTCTTTACTTACATATAT+TGG | - | chr5_4:12958741-12958760 | None:intergenic | 15.0% |
!! | TAATATATATATACAAGCTA+AGG | - | chr5_4:12959537-12959556 | None:intergenic | 15.0% |
!! | TTATCAAATCAAATGTATTA+AGG | + | chr5_4:12959554-12959573 | Msa0838560:three_prime_UTR | 15.0% |
!! | TTTGTTCAATTAAGATTACA+AGG | + | chr5_4:12956735-12956754 | Msa0838560:intron | 20.0% |
!! | ACAAGAATAATACAAAACTA+TGG | - | chr5_4:12956953-12956972 | None:intergenic | 20.0% |
!!! | TAAATTCGTGTTTTATTGAA+CGG | + | chr5_4:12957355-12957374 | Msa0838560:intron | 20.0% |
!! | TTATATGTTAGGTATAGTTT+AGG | + | chr5_4:12957690-12957709 | Msa0838560:intron | 20.0% |
!!! | TAATTCTTTCTGTTTTAGTA+TGG | - | chr5_4:12958053-12958072 | None:intergenic | 20.0% |
!! | ACTAAAACAGAAAGAATTAT+TGG | + | chr5_4:12958054-12958073 | Msa0838560:intron | 20.0% |
!! | CAATTTGAATAAAGTTAAAC+AGG | + | chr5_4:12958092-12958111 | Msa0838560:intron | 20.0% |
!!! | TTGTTTTATTTTACTCTTTC+AGG | + | chr5_4:12958228-12958247 | Msa0838560:intron | 20.0% |
!!! | AATAAAAAAGCATAACAAGA+AGG | - | chr5_4:12958346-12958365 | None:intergenic | 20.0% |
!! | AAAATCAAAATTTCTTGACA+GGG | - | chr5_4:12958495-12958514 | None:intergenic | 20.0% |
!! | AAAAATCAAAATTTCTTGAC+AGG | - | chr5_4:12958496-12958515 | None:intergenic | 20.0% |
!! | AAAATCAAAATTTCTTGACA+GGG | - | chr5_4:12958495-12958514 | None:intergenic | 20.0% |
!! | AAAAATCAAAATTTCTTGAC+AGG | - | chr5_4:12958496-12958515 | None:intergenic | 20.0% |
!!! | TTTTTATATTTGATTTGTGC+AGG | + | chr5_4:12958713-12958732 | Msa0838560:intron | 20.0% |
! | AATGAAGAAGATGAAGATAA+AGG | - | chr5_4:12956151-12956170 | None:intergenic | 25.0% |
! | AATGAAAGAGAAAAAAGAGT+GGG | - | chr5_4:12956503-12956522 | None:intergenic | 25.0% |
! | AAATGAAAGAGAAAAAAGAG+TGG | - | chr5_4:12956504-12956523 | None:intergenic | 25.0% |
!!! | TCTTTTTTCTCTTTCATTTC+AGG | + | chr5_4:12956505-12956524 | Msa0838560:intron | 25.0% |
!! | TTGTTGTTGTTGAGAAAATT+TGG | + | chr5_4:12956969-12956988 | Msa0838560:intron | 25.0% |
! | ATAGTAGTTTATTCAGACAA+GGG | + | chr5_4:12957205-12957224 | Msa0838560:CDS | 25.0% |
! | GAAATCTTGAGAAAAATTGT+GGG | - | chr5_4:12957252-12957271 | None:intergenic | 25.0% |
! | AGAAATCTTGAGAAAAATTG+TGG | - | chr5_4:12957253-12957272 | None:intergenic | 25.0% |
!!! | TTTTTTGACCTGTATCTTAA+TGG | + | chr5_4:12957452-12957471 | Msa0838560:intron | 25.0% |
!! | ATATGGCATTTTATAAGGAT+CGG | - | chr5_4:12957507-12957526 | None:intergenic | 25.0% |
! | TGATTCTAAGCTTATATGTT+AGG | + | chr5_4:12957679-12957698 | Msa0838560:intron | 25.0% |
! | ATTACATTATACCATCTTCT+TGG | + | chr5_4:12957761-12957780 | Msa0838560:intron | 25.0% |
! | AATCAAAATTTCCAAGAAGA+TGG | - | chr5_4:12957775-12957794 | None:intergenic | 25.0% |
!!! | TGAGAGATTATAGCTTTTTT+GGG | - | chr5_4:12957846-12957865 | None:intergenic | 25.0% |
!!! | ATGAGAGATTATAGCTTTTT+TGG | - | chr5_4:12957847-12957866 | None:intergenic | 25.0% |
! | GATGCAATTAGACTAAATAA+AGG | - | chr5_4:12957959-12957978 | None:intergenic | 25.0% |
! | AAAACATTAGAACAAGGATA+AGG | - | chr5_4:12958160-12958179 | None:intergenic | 25.0% |
! | GAAAAGTGATATTATTAGTG+TGG | + | chr5_4:12958407-12958426 | Msa0838560:CDS | 25.0% |
! | GCATTTATTTGCAACATTAA+TGG | - | chr5_4:12958451-12958470 | None:intergenic | 25.0% |
! | TAATGTTGCAAATAAATGCA+AGG | + | chr5_4:12958452-12958471 | Msa0838560:CDS | 25.0% |
! | GCATTTATTTGCAACATTAA+TGG | - | chr5_4:12958451-12958470 | None:intergenic | 25.0% |
! | TAATGTTGCAAATAAATGCA+AGG | + | chr5_4:12958452-12958471 | Msa0838560:CDS | 25.0% |
! | TCAAATTTCAACTATTGAAG+TGG | - | chr5_4:12959303-12959322 | None:intergenic | 25.0% |
!!! | TTTCCTGATAATTTTTCAAC+AGG | + | chr5_4:12959440-12959459 | Msa0838560:intron | 25.0% |
! | ATTCCTGTTGAAAAATTATC+AGG | - | chr5_4:12959446-12959465 | None:intergenic | 25.0% |
! | ATATATACAAGCTAAGGTTA+AGG | - | chr5_4:12959531-12959550 | None:intergenic | 25.0% |
AAGAAGATGAAGATAAAGGT+TGG | - | chr5_4:12956147-12956166 | None:intergenic | 30.0% | |
TGAATTACATGAAATGAGGA+AGG | - | chr5_4:12956376-12956395 | None:intergenic | 30.0% | |
GAGATGAATTACATGAAATG+AGG | - | chr5_4:12956380-12956399 | None:intergenic | 30.0% | |
AAGGTAGAGGGAAAAAAAAA+AGG | - | chr5_4:12956616-12956635 | None:intergenic | 30.0% | |
GCTCAATTTATAAAGGTAGA+GGG | - | chr5_4:12956628-12956647 | None:intergenic | 30.0% | |
CTCTACCTTTATAAATTGAG+CGG | + | chr5_4:12956627-12956646 | Msa0838560:intron | 30.0% | |
TATTGCCGCTCAATTTATAA+AGG | - | chr5_4:12956635-12956654 | None:intergenic | 30.0% | |
TTAACATTGAGAGAGAAGTT+AGG | + | chr5_4:12956666-12956685 | Msa0838560:intron | 30.0% | |
TAACATTGAGAGAGAAGTTA+GGG | + | chr5_4:12956667-12956686 | Msa0838560:intron | 30.0% | |
ATGACTAAAAAAGACTCGTT+TGG | - | chr5_4:12956884-12956903 | None:intergenic | 30.0% | |
ATACAAAACTATGGTCTGTT+TGG | - | chr5_4:12956944-12956963 | None:intergenic | 30.0% | |
AGTGTGTATAATAGTAACTG+TGG | + | chr5_4:12957007-12957026 | Msa0838560:intron | 30.0% | |
! | TGTGGTTCTTTTGATCATTT+AGG | + | chr5_4:12957025-12957044 | Msa0838560:intron | 30.0% |
! | GTTTTCAATCTGAGTTACAA+CGG | + | chr5_4:12957139-12957158 | Msa0838560:CDS | 30.0% |
GATAGTAGTTTATTCAGACA+AGG | + | chr5_4:12957204-12957223 | Msa0838560:CDS | 30.0% | |
TTTCTCAAGATTTCTTGTGA+TGG | + | chr5_4:12957258-12957277 | Msa0838560:CDS | 30.0% | |
! | CTGCAATATGGCATTTTATA+AGG | - | chr5_4:12957512-12957531 | None:intergenic | 30.0% |
CTTATAAAATGCCATATTGC+AGG | + | chr5_4:12957510-12957529 | Msa0838560:intron | 30.0% | |
AAAGACTAGATCATGAAGTA+TGG | + | chr5_4:12957572-12957591 | Msa0838560:intron | 30.0% | |
TGATTTATTCTATGACCTAG+TGG | - | chr5_4:12957911-12957930 | None:intergenic | 30.0% | |
TGGAATTATTTGCATGTAAG+AGG | - | chr5_4:12958119-12958138 | None:intergenic | 30.0% | |
ATTAGAACAAGGATAAGGAT+GGG | - | chr5_4:12958155-12958174 | None:intergenic | 30.0% | |
TGCTTCAAAACATTAGAACA+AGG | - | chr5_4:12958166-12958185 | None:intergenic | 30.0% | |
TTGAAGCAATAGCAATGTAT+TGG | + | chr5_4:12958178-12958197 | Msa0838560:intron | 30.0% | |
TGAAGCAATAGCAATGTATT+GGG | + | chr5_4:12958179-12958198 | Msa0838560:intron | 30.0% | |
! | TTTACTCTTTCAGGTGATAA+TGG | + | chr5_4:12958237-12958256 | Msa0838560:intron | 30.0% |
ATTTAAAAGTTGCCAATACC+TGG | - | chr5_4:12958315-12958334 | None:intergenic | 30.0% | |
!! | CTAATAATATCACTTTTCCC+TGG | - | chr5_4:12958405-12958424 | None:intergenic | 30.0% |
TTTATGATGTATTGCTTGAC+AGG | + | chr5_4:12958823-12958842 | Msa0838560:CDS | 30.0% | |
ATATAGCATGAATGTAAAGG+AGG | - | chr5_4:12958921-12958940 | None:intergenic | 30.0% | |
ACGATATAGCATGAATGTAA+AGG | - | chr5_4:12958924-12958943 | None:intergenic | 30.0% | |
ACGCAGGTAAAATATTGTTT+GGG | + | chr5_4:12959060-12959079 | Msa0838560:intron | 30.0% | |
TTACACATCTGCAAGTATTA+TGG | + | chr5_4:12959103-12959122 | Msa0838560:intron | 30.0% | |
AAAAGTCAACAAACAAGCTT+AGG | - | chr5_4:12959189-12959208 | None:intergenic | 30.0% | |
AAATCTTCGTAAATCATCTC+AGG | + | chr5_4:12959235-12959254 | Msa0838560:CDS | 30.0% | |
! | ATGTCTTGAAAATTTTCCTG+TGG | + | chr5_4:12959387-12959406 | Msa0838560:intron | 30.0% |
!! | TTTTTCAACAGGAATTACTG+CGG | + | chr5_4:12959451-12959470 | Msa0838560:intron | 30.0% |
AAGATGAAGATAAAGGTTGG+TGG | - | chr5_4:12956144-12956163 | None:intergenic | 35.0% | |
CATGAAATGAGGAAGGATTT+GGG | - | chr5_4:12956369-12956388 | None:intergenic | 35.0% | |
ACATGAAATGAGGAAGGATT+TGG | - | chr5_4:12956370-12956389 | None:intergenic | 35.0% | |
GTTATGATGATCGCTGAAAT+TGG | - | chr5_4:12956412-12956431 | None:intergenic | 35.0% | |
CGCTCAATTTATAAAGGTAG+AGG | - | chr5_4:12956629-12956648 | None:intergenic | 35.0% | |
!! | ATTTTCTGGAAATGGTGACA+CGG | - | chr5_4:12957172-12957191 | None:intergenic | 35.0% |
GCATACATACCTACAACAAT+GGG | - | chr5_4:12957297-12957316 | None:intergenic | 35.0% | |
AGCATACATACCTACAACAA+TGG | - | chr5_4:12957298-12957317 | None:intergenic | 35.0% | |
! | AAAGCTTTTAGATGCTGAAG+TGG | + | chr5_4:12957411-12957430 | Msa0838560:CDS | 35.0% |
AAAATGCCATATTGCAGGAT+TGG | + | chr5_4:12957515-12957534 | Msa0838560:intron | 35.0% | |
CAACTAGGTTATTCACAAAC+TGG | - | chr5_4:12957552-12957571 | None:intergenic | 35.0% | |
! | CATGATCTAGTCTTTCAACT+AGG | - | chr5_4:12957567-12957586 | None:intergenic | 35.0% |
! | TATTCTATGACCTAGTGGAT+GGG | - | chr5_4:12957906-12957925 | None:intergenic | 35.0% |
TTATTCTATGACCTAGTGGA+TGG | - | chr5_4:12957907-12957926 | None:intergenic | 35.0% | |
CATTAGAACAAGGATAAGGA+TGG | - | chr5_4:12958156-12958175 | None:intergenic | 35.0% | |
AGTTTATAATTCCTTCAGCC+AGG | + | chr5_4:12958384-12958403 | Msa0838560:intron | 35.0% | |
GTTTATAATTCCTTCAGCCA+GGG | + | chr5_4:12958385-12958404 | Msa0838560:intron | 35.0% | |
!! | AGAGGTTTTGTCTAACTTCT+TGG | - | chr5_4:12958687-12958706 | None:intergenic | 35.0% |
AAACTTGCACACAGAATCTA+TGG | - | chr5_4:12958898-12958917 | None:intergenic | 35.0% | |
TATGCATTTAGCTATCAAGC+AGG | + | chr5_4:12959025-12959044 | Msa0838560:CDS | 35.0% | |
GACGCAGGTAAAATATTGTT+TGG | + | chr5_4:12959059-12959078 | Msa0838560:intron | 35.0% | |
AAGCTTGAATACCCAAATCT+TGG | + | chr5_4:12959147-12959166 | Msa0838560:intron | 35.0% | |
CCATGAAAATGCCAAGATTT+GGG | - | chr5_4:12959161-12959180 | None:intergenic | 35.0% | |
TCCATGAAAATGCCAAGATT+TGG | - | chr5_4:12959162-12959181 | None:intergenic | 35.0% | |
!! | AAGTTCTGAAGAGGAACTTA+TGG | + | chr5_4:12959411-12959430 | Msa0838560:intron | 35.0% |
! | TGAGGAAGGATTTGGGTTTA+TGG | - | chr5_4:12956362-12956381 | None:intergenic | 40.0% |
GAAGCTTCTATTCTTCTCTC+AGG | + | chr5_4:12956459-12956478 | Msa0838560:five_prime_UTR | 40.0% | |
TCAGGGATTCATACACATCA+TGG | - | chr5_4:12957059-12957078 | None:intergenic | 40.0% | |
GCAGAAACAATAGCACACTA+TGG | + | chr5_4:12957102-12957121 | Msa0838560:five_prime_UTR | 40.0% | |
CAATAGCACACTATGGAATG+TGG | + | chr5_4:12957109-12957128 | Msa0838560:exon | 40.0% | |
!! | TTTTCTGGAAATGGTGACAC+GGG | - | chr5_4:12957171-12957190 | None:intergenic | 40.0% |
!! | CTCGAGCTATTTTCTGGAAA+TGG | - | chr5_4:12957180-12957199 | None:intergenic | 40.0% |
TTCCAGAAAATAGCTCGAGA+AGG | + | chr5_4:12957181-12957200 | Msa0838560:CDS | 40.0% | |
TCCAGAAAATAGCTCGAGAA+GGG | + | chr5_4:12957182-12957201 | Msa0838560:CDS | 40.0% | |
TATGTTCTGCCCATTGTTGT+AGG | + | chr5_4:12957285-12957304 | Msa0838560:CDS | 40.0% | |
TATGTATGCTATGCCGTGAT+AGG | + | chr5_4:12957308-12957327 | Msa0838560:intron | 40.0% | |
CATCGATGCATATCCTATCA+CGG | - | chr5_4:12957324-12957343 | None:intergenic | 40.0% | |
! | AACGGTTCTTTTGTTGATGC+AGG | + | chr5_4:12957373-12957392 | Msa0838560:intron | 40.0% |
GGTTATTCACAAACTGGAAC+TGG | - | chr5_4:12957546-12957565 | None:intergenic | 40.0% | |
GCCAATGAACATTCAAGCAT+TGG | + | chr5_4:12957623-12957642 | Msa0838560:intron | 40.0% | |
GCCAATGCTTGAATGTTCAT+TGG | - | chr5_4:12957627-12957646 | None:intergenic | 40.0% | |
!!! | AGCTTTTTTGGGAGTTCTCA+TGG | - | chr5_4:12957835-12957854 | None:intergenic | 40.0% |
TGGATGGGTACAGTATGATT+TGG | - | chr5_4:12957891-12957910 | None:intergenic | 40.0% | |
TGCATCATTAGTCCTTCTCA+AGG | + | chr5_4:12957973-12957992 | Msa0838560:intron | 40.0% | |
CAACATTAATGGCATCTGAG+GGG | - | chr5_4:12958440-12958459 | None:intergenic | 40.0% | |
GCAACATTAATGGCATCTGA+GGG | - | chr5_4:12958441-12958460 | None:intergenic | 40.0% | |
TGCAACATTAATGGCATCTG+AGG | - | chr5_4:12958442-12958461 | None:intergenic | 40.0% | |
CTTCTTGGCACAAAATGCTT+AGG | - | chr5_4:12958672-12958691 | None:intergenic | 40.0% | |
TTCACAGACGCTATAAGACT+CGG | + | chr5_4:12958765-12958784 | Msa0838560:CDS | 40.0% | |
TATAAGACTCGGCTATGGAA+TGG | + | chr5_4:12958776-12958795 | Msa0838560:CDS | 40.0% | |
ATAAGACTCGGCTATGGAAT+GGG | + | chr5_4:12958777-12958796 | Msa0838560:CDS | 40.0% | |
GGGCAGAGTGCATAATAAAA+AGG | + | chr5_4:12958797-12958816 | Msa0838560:CDS | 40.0% | |
! | GTTTGTTACAGTGCCATAGA+TGG | + | chr5_4:12958963-12958982 | Msa0838560:intron | 40.0% |
CAGGAAAGATTTAATGACGC+AGG | + | chr5_4:12959044-12959063 | Msa0838560:CDS | 40.0% | |
! | CCCAAATCTTGGCATTTTCA+TGG | + | chr5_4:12959158-12959177 | Msa0838560:intron | 40.0% |
!!! | TGTTGACTTTTGCAGCTACA+TGG | + | chr5_4:12959198-12959217 | Msa0838560:intron | 40.0% |
!! | TCATCTCAGGAGCACTAATT+AGG | + | chr5_4:12959248-12959267 | Msa0838560:exon | 40.0% |
! | GGAGCACTAATTAGGTTGTT+AGG | + | chr5_4:12959256-12959275 | Msa0838560:exon | 40.0% |
GTATTAAGGCCTAAAACCTC+TGG | + | chr5_4:12959568-12959587 | Msa0838560:three_prime_UTR | 40.0% | |
! | GAGAATCTTCCAGAGGTTTT+AGG | - | chr5_4:12959580-12959599 | None:intergenic | 40.0% |
ATTTGTGTGATCGGTGGTGA+TGG | - | chr5_4:12956250-12956269 | None:intergenic | 45.0% | |
GAAGGAGAGAGAGTGAGAAA+CGG | - | chr5_4:12956289-12956308 | None:intergenic | 45.0% | |
GTGAATGGGAGAGAAATCGA+AGG | - | chr5_4:12956307-12956326 | None:intergenic | 45.0% | |
!! | TCCCTTCTCGAGCTATTTTC+TGG | - | chr5_4:12957186-12957205 | None:intergenic | 45.0% |
TGAAGTGGAACAAGAGATCG+AGG | + | chr5_4:12957426-12957445 | Msa0838560:CDS | 45.0% | |
GTGCACAGCCATTAAGATAC+AGG | - | chr5_4:12957463-12957482 | None:intergenic | 45.0% | |
TTCACAAACTGGAACTGGTC+CGG | - | chr5_4:12957541-12957560 | None:intergenic | 45.0% | |
TCATACTGTACCCATCCACT+AGG | + | chr5_4:12957893-12957912 | Msa0838560:intron | 45.0% | |
CTCACACAATGTCCTTGAGA+AGG | - | chr5_4:12957988-12958007 | None:intergenic | 45.0% | |
GGATGGGAAGATTGCTTAAG+TGG | - | chr5_4:12958139-12958158 | None:intergenic | 45.0% | |
ATTGTACCTCAGCCAGGTAT+TGG | + | chr5_4:12958300-12958319 | Msa0838560:intron | 45.0% | |
!! | TATCACTTTTCCCTGGCTGA+AGG | - | chr5_4:12958398-12958417 | None:intergenic | 45.0% |
ACACAGAATCTATGGTGGCA+AGG | - | chr5_4:12958890-12958909 | None:intergenic | 45.0% | |
CTTGCACACAGAATCTATGG+TGG | - | chr5_4:12958895-12958914 | None:intergenic | 45.0% | |
TGCCATAGATGGTCCAGATT+CGG | + | chr5_4:12958974-12958993 | Msa0838560:CDS | 45.0% | |
TACCGAATCTGGACCATCTA+TGG | - | chr5_4:12958979-12958998 | None:intergenic | 45.0% | |
AGTTCTTGAGCTACCGAATC+TGG | - | chr5_4:12958990-12959009 | None:intergenic | 45.0% | |
TGGGTATTCAAGCTTGCAGA+AGG | - | chr5_4:12959142-12959161 | None:intergenic | 45.0% | |
!! | TCCTGTGGTAAGTTCTGAAG+AGG | + | chr5_4:12959402-12959421 | Msa0838560:intron | 45.0% |
TCCTCTTCAGAACTTACCAC+AGG | - | chr5_4:12959406-12959425 | None:intergenic | 45.0% | |
GAAGTACGAGAATCTTCCAG+AGG | - | chr5_4:12959587-12959606 | None:intergenic | 45.0% | |
TTCTCCATCCAACCGATCAC+TGG | + | chr5_4:12956216-12956235 | Msa0838560:five_prime_UTR | 50.0% | |
AGAGAGAGTGAGAAACGGAG+CGG | - | chr5_4:12956284-12956303 | None:intergenic | 50.0% | |
TGGAGAAGAGGGAGGTGAAT+GGG | - | chr5_4:12956321-12956340 | None:intergenic | 50.0% | |
ATGGAGAAGAGGGAGGTGAA+TGG | - | chr5_4:12956322-12956341 | None:intergenic | 50.0% | |
AGCGACGAGAATGGAGAAGA+GGG | - | chr5_4:12956332-12956351 | None:intergenic | 50.0% | |
AGTGGGAGAGAGAGAGAAAG+AGG | - | chr5_4:12956486-12956505 | None:intergenic | 50.0% | |
! | TGCCATATTGCAGGATTGGC+CGG | + | chr5_4:12957519-12957538 | Msa0838560:intron | 50.0% |
TACCTGGCTGAGGTACAATC+TGG | - | chr5_4:12958299-12958318 | None:intergenic | 50.0% | |
AAGTTGCCAATACCTGGCTG+AGG | - | chr5_4:12958309-12958328 | None:intergenic | 50.0% | |
GACGCTATAAGACTCGGCTA+TGG | + | chr5_4:12958771-12958790 | Msa0838560:CDS | 50.0% | |
CAAGGATGCTACAGGTGACA+CGG | - | chr5_4:12958872-12958891 | None:intergenic | 50.0% | |
TATGGTGGCAAGGATGCTAC+AGG | - | chr5_4:12958880-12958899 | None:intergenic | 50.0% | |
!! | TGTGTGATCGGTGGTGATGG+TGG | - | chr5_4:12956247-12956266 | None:intergenic | 55.0% |
! | GGTGGCGGCATTTGTGTGAT+CGG | - | chr5_4:12956259-12956278 | None:intergenic | 55.0% |
GAGAGAGTGAGAAACGGAGC+GGG | - | chr5_4:12956283-12956302 | None:intergenic | 55.0% | |
GACGAGAATGGAGAAGAGGG+AGG | - | chr5_4:12956329-12956348 | None:intergenic | 55.0% | |
GAGCGACGAGAATGGAGAAG+AGG | - | chr5_4:12956333-12956352 | None:intergenic | 55.0% | |
GTCCGGCCAATCCTGCAATA+TGG | - | chr5_4:12957524-12957543 | None:intergenic | 55.0% | |
TGCCAGATTGTACCTCAGCC+AGG | + | chr5_4:12958294-12958313 | Msa0838560:CDS | 55.0% | |
!! | ATGGTGGTGGCGCCAGTGAT+CGG | - | chr5_4:12956231-12956250 | None:intergenic | 60.0% |
!! | GTGATCGGTGGTGATGGTGG+TGG | - | chr5_4:12956244-12956263 | None:intergenic | 60.0% |
GGCGGCATTTGTGTGATCGG+TGG | - | chr5_4:12956256-12956275 | None:intergenic | 60.0% | |
AGAGTGAGAAACGGAGCGGG+AGG | - | chr5_4:12956280-12956299 | None:intergenic | 60.0% | |
GGAAGCGAGAGCGACGAGAA+TGG | - | chr5_4:12956341-12956360 | None:intergenic | 60.0% | |
GGCGCCAGTGATCGGTTGGA+TGG | - | chr5_4:12956223-12956242 | None:intergenic | 65.0% | |
! | TGGTGGCGCCAGTGATCGGT+TGG | - | chr5_4:12956227-12956246 | None:intergenic | 65.0% |
AGAAACGGAGCGGGAGGTGG+CGG | - | chr5_4:12956274-12956293 | None:intergenic | 65.0% | |
GTGAGAAACGGAGCGGGAGG+TGG | - | chr5_4:12956277-12956296 | None:intergenic | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr5_4 | gene | 12956104 | 12959606 | 12956104 | ID=Msa0838560;Name=Msa0838560 |
chr5_4 | mRNA | 12956104 | 12959606 | 12956104 | ID=Msa0838560-mRNA-1;Parent=Msa0838560;Name=Msa0838560-mRNA-1;_AED=0.24;_eAED=0.24;_QI=456|1|1|1|0.77|0.7|10|157|227 |
chr5_4 | exon | 12956104 | 12956480 | 12956104 | ID=Msa0838560-mRNA-1:exon:5758;Parent=Msa0838560-mRNA-1 |
chr5_4 | exon | 12957047 | 12957306 | 12957047 | ID=Msa0838560-mRNA-1:exon:5759;Parent=Msa0838560-mRNA-1 |
chr5_4 | exon | 12957395 | 12957447 | 12957395 | ID=Msa0838560-mRNA-1:exon:5760;Parent=Msa0838560-mRNA-1 |
chr5_4 | exon | 12957532 | 12957588 | 12957532 | ID=Msa0838560-mRNA-1:exon:5761;Parent=Msa0838560-mRNA-1 |
chr5_4 | exon | 12958250 | 12958315 | 12958250 | ID=Msa0838560-mRNA-1:exon:5762;Parent=Msa0838560-mRNA-1 |
chr5_4 | exon | 12958402 | 12958473 | 12958402 | ID=Msa0838560-mRNA-1:exon:5763;Parent=Msa0838560-mRNA-1 |
chr5_4 | exon | 12958735 | 12958844 | 12958735 | ID=Msa0838560-mRNA-1:exon:5764;Parent=Msa0838560-mRNA-1 |
chr5_4 | exon | 12958974 | 12959065 | 12958974 | ID=Msa0838560-mRNA-1:exon:5765;Parent=Msa0838560-mRNA-1 |
chr5_4 | exon | 12959213 | 12959277 | 12959213 | ID=Msa0838560-mRNA-1:exon:5766;Parent=Msa0838560-mRNA-1 |
chr5_4 | exon | 12959462 | 12959606 | 12959462 | ID=Msa0838560-mRNA-1:exon:5767;Parent=Msa0838560-mRNA-1 |
chr5_4 | five_prime_UTR | 12956104 | 12956480 | 12956104 | ID=Msa0838560-mRNA-1:five_prime_utr;Parent=Msa0838560-mRNA-1 |
chr5_4 | five_prime_UTR | 12957047 | 12957125 | 12957047 | ID=Msa0838560-mRNA-1:five_prime_utr;Parent=Msa0838560-mRNA-1 |
chr5_4 | CDS | 12957126 | 12957306 | 12957126 | ID=Msa0838560-mRNA-1:cds;Parent=Msa0838560-mRNA-1 |
chr5_4 | CDS | 12957395 | 12957447 | 12957395 | ID=Msa0838560-mRNA-1:cds;Parent=Msa0838560-mRNA-1 |
chr5_4 | CDS | 12957532 | 12957588 | 12957532 | ID=Msa0838560-mRNA-1:cds;Parent=Msa0838560-mRNA-1 |
chr5_4 | CDS | 12958250 | 12958315 | 12958250 | ID=Msa0838560-mRNA-1:cds;Parent=Msa0838560-mRNA-1 |
chr5_4 | CDS | 12958402 | 12958473 | 12958402 | ID=Msa0838560-mRNA-1:cds;Parent=Msa0838560-mRNA-1 |
chr5_4 | CDS | 12958735 | 12958844 | 12958735 | ID=Msa0838560-mRNA-1:cds;Parent=Msa0838560-mRNA-1 |
chr5_4 | CDS | 12958974 | 12959065 | 12958974 | ID=Msa0838560-mRNA-1:cds;Parent=Msa0838560-mRNA-1 |
chr5_4 | CDS | 12959213 | 12959265 | 12959213 | ID=Msa0838560-mRNA-1:cds;Parent=Msa0838560-mRNA-1 |
chr5_4 | three_prime_UTR | 12959266 | 12959277 | 12959266 | ID=Msa0838560-mRNA-1:three_prime_utr;Parent=Msa0838560-mRNA-1 |
chr5_4 | three_prime_UTR | 12959462 | 12959606 | 12959462 | ID=Msa0838560-mRNA-1:three_prime_utr;Parent=Msa0838560-mRNA-1 |
Gene Sequence |
Protein sequence |